1. Elimination of human folypolyglutamate synthetase alters programming and plasticity of somatic cells
- Author
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Srivastava, Avinash C, Thompson, Yesenia Guadalupe, Singhal, Jyotsana, Stellern, Jordan, Srivastava, Anviksha, Du, Juan, O'Connor, Timothy R, and Riggs, Arthur D
- Subjects
Biological Sciences ,Biomedical and Clinical Sciences ,Genetics ,Stem Cell Research ,Stem Cell Research - Nonembryonic - Non-Human ,Regenerative Medicine ,Underpinning research ,1.1 Normal biological development and functioning ,Generic health relevance ,Cell Differentiation ,Cell Division ,Cell Line ,Cell Plasticity ,Cell Proliferation ,DNA Methylation ,Folic Acid ,Gene Expression ,Genes ,Homeobox ,Glutamic Acid ,HEK293 Cells ,Humans ,Metabolic Networks and Pathways ,Myocytes ,Cardiac ,Nanog Homeobox Protein ,Neural Stem Cells ,Octamer Transcription Factor-3 ,Peptide Synthases ,S-Adenosylmethionine ,Sex-Determining Region Y Protein ,gamma-Aminobutyric Acid ,C1 metabolism ,CRISPR/Cas9 ,GABA ,glutamate-induced pluripotency ,Biochemistry and Cell Biology ,Physiology ,Medical Physiology ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medical physiology - Abstract
Folates are vital cofactors for the regeneration of S-adenosyl methionine, which is the methyl source for DNA methylation, protein methylation, and other aspects of one-carbon (C1) metabolism. Thus, folates are critical for establishing and preserving epigenetic programming. Folypolyglutamate synthetase (FPGS) is known to play a crucial role in the maintenance of intracellular folate levels. Therefore, any modulation in FPGS is expected to alter DNA methylation and numerous other metabolic pathways. To explore the role of polyglutamylation of folate, we eliminated both isoforms of FPGS in human cells (293T), producing FPGS knockout (FPGSko) cells. The elimination of FPGS significantly decreased cell proliferation, with a major effect on oxidative phosphorylation and a lesser effect on glycolysis. We found a substantial reduction in global DNA methylation and noteworthy changes in gene expression related to C1 metabolism, cell division, DNA methylation, pluripotency, Glu metabolism, neurogenesis, and cardiogenesis. The expression levels of NANOG, octamer-binding transcription factor 4, and sex-determining region Y-box 2 levels were increased in the mutant, consistent with the transition to a stem cell-like state. Gene expression and metabolite data also indicate a major change in Glu and GABA metabolism. In the appropriate medium, FPGSko cells can differentiate to produce mainly cells with characteristics of either neural stem cells or cardiomyocytes.-Srivastava, A. C., Thompson, Y. G., Singhal, J., Stellern, J., Srivastava, A., Du, J., O'Connor, T. R., Riggs, A. D. Elimination of human folypolyglutamate synthetase alters programming and plasticity of somatic cells.
- Published
- 2019