115 results on '"Shamik Mascharak"'
Search Results
2. Multiplexed evaluation of mouse wound tissue using oligonucleotide barcoding with single-cell RNA sequencing
- Author
-
Michael Januszyk, Michelle Griffin, Shamik Mascharak, Heather E. Talbott, Kellen Chen, Dominic Henn, Amanda F. Spielman, Jennifer B.L. Parker, Norah E. Liang, Asha Cotterell, Nicholas Guardino, Deshka S. Foster, Dhananjay Wagh, John Coller, Geoffrey C. Gurtner, Derrick C. Wan, and Michael T. Longaker
- Subjects
Single Cell ,RNAseq ,Model Organisms ,Gene Expression ,Science (General) ,Q1-390 - Abstract
Summary: Despite its rapidly increased availability for the study of complex tissue, single-cell RNA sequencing remains prohibitively expensive for large studies. Here, we present a protocol using oligonucleotide barcoding for the tagging and pooling of multiple samples from healing wounds, which are among the most challenging tissue types for this application. We describe steps to generate skin wounds in mice, followed by tissue harvest and oligonucleotide barcoding. This protocol is also applicable to other species including rats, pigs, and humans.For complete details on the use and execution of this protocol, please refer to Stoeckius et al. (2018),1 Galiano et al. (2004),2 and Mascharak et al. (2022).3 : Publisher’s note: Undertaking any experimental protocol requires adherence to local institutional guidelines for laboratory safety and ethics.
- Published
- 2023
- Full Text
- View/download PDF
3. 17. Mechanical Offloading Prevents and Rescues Microtrauma Induced Fibrosis in Large Animal Model
- Author
-
Jennifer Brigitta Laufey Parker, BSc (Hons) Bioengineering, Michelle Griffin, MD, PhD, Heather Talbott, PhD, Shamik Mascharak, PhD, Jason Guo, PhD, Norah E. Liang, MD, Mauricio Downer, Jr., BS, Darren Abbas, MD, Annah Morgan, BS, Michael Januszyk, MD, PhD, Michael T. Longaker, MD, MBA, and Derrick C. Wan, MD
- Subjects
Surgery ,RD1-811 - Published
- 2023
- Full Text
- View/download PDF
4. Elucidating the fundamental fibrotic processes driving abdominal adhesion formation
- Author
-
Deshka S. Foster, Clement D. Marshall, Gunsagar S. Gulati, Malini S. Chinta, Alan Nguyen, Ankit Salhotra, R. Ellen Jones, Austin Burcham, Tristan Lerbs, Lu Cui, Megan E. King, Ashley L. Titan, R. Chase Ransom, Anoop Manjunath, Michael S. Hu, Charles P. Blackshear, Shamik Mascharak, Alessandra L. Moore, Jeffrey A. Norton, Cindy J. Kin, Andrew A. Shelton, Michael Januszyk, Geoffrey C. Gurtner, Gerlinde Wernig, and Michael T. Longaker
- Subjects
Science - Abstract
Abdominal adhesions are a common cause of bowel obstruction, but knowledge regarding adhesion biology and anti-adhesion therapies remains limited. Here the authors report a systematic analysis of mouse and human adhesion tissues demonstrating that visceral fibroblast JUN and associated PDGFRA expression promote adhesions, and JUN suppression can prevent adhesion formation.
- Published
- 2020
- Full Text
- View/download PDF
5. Endogenous Mechanisms of Craniomaxillofacial Repair: Toward Novel Regenerative Therapies
- Author
-
Heather E. desJardins-Park, Shamik Mascharak, Michael T. Longaker, and Derrick C. Wan
- Subjects
regeneration ,scarring ,wound healing ,fibrosis ,oral mucosa ,skull ,Dentistry ,RK1-715 - Abstract
In the fields of oral and craniomaxillofacial surgery, regeneration of multiple tissue types—including bone, skin, teeth, and mucosal soft tissue—is often a desired outcome. However, limited endogenous capacity for regeneration, as well as predisposition of many tissues to fibrotic healing, may prevent recovery of normal form and function for patients. Recent basic science research has advanced our understanding of molecular and cellular pathways of repair in the oral/craniofacial region and how these are influenced by local microenvironment and embryonic origin. Here, we review the current state of knowledge in oral and craniomaxillofacial tissue repair/regeneration in four key areas: bone (in the context of calvarial defects and mandibular regeneration during distraction osteogenesis); skin (in the context of cleft lip/palate surgery); oral mucosa (in the context of minimally scarring repair of mucosal injuries); and teeth (in the context of dental disease/decay). These represent four distinct healing processes and outcomes. We will discuss both divergent and conserved pathways of repair in these contexts, with an eye toward fundamental mechanisms of regeneration vs. fibrosis as well as translational research directions. Ultimately, this knowledge can be leveraged to develop new cell-based and molecular treatment strategies to encourage bone and soft tissue regeneration in oral and craniomaxillofacial surgery.
- Published
- 2021
- Full Text
- View/download PDF
6. Engineered Matrices Enable the Culture of Human Patient‐Derived Intestinal Organoids
- Author
-
Daniel R. Hunt, Katarina C. Klett, Shamik Mascharak, Huiyuan Wang, Diana Gong, Junzhe Lou, Xingnan Li, Pamela C. Cai, Riley A. Suhar, Julia Y. Co, Bauer L. LeSavage, Abbygail A. Foster, Yuan Guan, Manuel R. Amieva, Gary Peltz, Yan Xia, Calvin J. Kuo, and Sarah C. Heilshorn
- Subjects
3D cell culture ,adult stem cells ,engineered biomaterial ,extracellular matrix ,intestinal organoid ,Science - Abstract
Abstract Human intestinal organoids from primary human tissues have the potential to revolutionize personalized medicine and preclinical gastrointestinal disease models. A tunable, fully defined, designer matrix, termed hyaluronan elastin‐like protein (HELP) is reported, which enables the formation, differentiation, and passaging of adult primary tissue‐derived, epithelial‐only intestinal organoids. HELP enables the encapsulation of dissociated patient‐derived cells, which then undergo proliferation and formation of enteroids, spherical structures with polarized internal lumens. After 12 rounds of passaging, enteroid growth in HELP materials is found to be statistically similar to that in animal‐derived matrices. HELP materials also support the differentiation of human enteroids into mature intestinal cell subtypes. HELP matrices allow stiffness, stress relaxation rate, and integrin‐ligand concentration to be independently and quantitatively specified, enabling fundamental studies of organoid–matrix interactions and potential patient‐specific optimization. Organoid formation in HELP materials is most robust in gels with stiffer moduli (G’ ≈ 1 kPa), slower stress relaxation rate (t1/2 ≈ 18 h), and higher integrin ligand concentration (0.5 × 10−3–1 × 10−3 m RGD peptide). This material provides a promising in vitro model for further understanding intestinal development and disease in humans and a reproducible, biodegradable, minimal matrix with no animal‐derived products or synthetic polyethylene glycol for potential clinical translation.
- Published
- 2021
- Full Text
- View/download PDF
7. QS61. Irradiated Fibroblast Sub-populations Alter Gene Expression to Heal Murine Skin
- Author
-
Darren B. Abbas, MD, Christopher V. Lavin, MS, Evan J. Fahy, MB Bch BAO, MCh, Michelle Griffin, MBChB, PhD, Shamik Mascharak, BS, Nicholas Guardino, BS, Hendrik Lintel, BS, Michael Januszyk, MD, PhD, Michael T. Longaker, MD, MBA, and Derrick C. Wan, MD
- Subjects
Surgery ,RD1-811 - Published
- 2022
- Full Text
- View/download PDF
8. Understanding the impact of fibroblast heterogeneity on skin fibrosis
- Author
-
Michelle F. Griffin, Heather E. desJardins-Park, Shamik Mascharak, Mimi R. Borrelli, and Michael T. Longaker
- Subjects
fibroblast heterogeneity ,scarring ,wound healing ,dermis ,skin fibrosis ,Medicine ,Pathology ,RB1-214 - Abstract
Tissue fibrosis is the deposition of excessive extracellular matrix and can occur as part of the body's natural wound healing process upon injury, or as a consequence of diseases such as systemic sclerosis. Skin fibrosis contributes to significant morbidity due to the prevalence of injuries resulting from trauma and burn. Fibroblasts, the principal cells of the dermis, synthesize extracellular matrix to maintain the skin during homeostasis and also play a pivotal role in all stages of wound healing. Although it was previously believed that fibroblasts are homogeneous and mostly quiescent cells, it has become increasingly recognized that numerous fibroblast subtypes with unique functions and morphologies exist. This Review provides an overview of fibroblast heterogeneity in the mammalian dermis. We explain how fibroblast identity relates to their developmental origin, anatomical site and precise location within the skin tissue architecture in both human and mouse dermis. We discuss current evidence for the varied functionality of fibroblasts within the dermis and the relationships between fibroblast subtypes, and explain the current understanding of how fibroblast subpopulations may be controlled through transcriptional regulatory networks and paracrine communications. We consider how fibroblast heterogeneity can influence wound healing and fibrosis, and how insight into fibroblast heterogeneity could lead to novel therapeutic developments and targets for skin fibrosis. Finally, we contemplate how future studies should be shaped to implement knowledge of fibroblast heterogeneity into clinical practice in order to lessen the burden of skin fibrosis.
- Published
- 2020
- Full Text
- View/download PDF
9. 3: Multimodal Molecular Analysis Reveals Divergent Trajectories Of Wound Regeneration Versus Fibrosis
- Author
-
Heather E. desJardins-Park, AB, Shamik Mascharak, BA, Michael Januszyk, MD, PhD, Kellen Chen, PhD, Michael F. Davitt, MD, Janos Demeter, PhD, Dominic Henn, MD, Michelle Griffin, MD, PhD, Clark A. Bonham, BA, Nancie Mooney, PhD, Ran Cheng, BS, Peter K. Jackson, PhD, Derrick C. Wan, MD, Geoffrey C. Gurtner, MD, and Michael T. Longaker, MD, MBA
- Subjects
Surgery ,RD1-811 - Abstract
Purpose: Scarring in the mouse dorsal dermis is mediated by pro-fibrotic, Engrailed-1 lineage-positive fibroblasts (EPFs). We recently showed that mechanotransduction blockade (YAP inhibition, using the drug verteporfin), results in complete wound regeneration, with full recovery of normal dermal appendages (hair follicles, glands), extracellular matrix (ECM) architecture, and tensile strength. This regenerative outcome following verteporfin treatment is mediated by Engrailed-1 lineage-negative fibroblasts (ENFs). The complex milieu of cell types and molecular signals involved in wound repair makes it difficult to study using any single data modality. Thus, we sought to use a holistic approach, incorporating multiple high-throughput, high-dimensional analyses, to define the divergent molecular events distinguishing typical scarring healing from verteporfin-induced wound regeneration. Methods: C57BL/6J mice underwent dorsal splinted excisional wounding per standard protocol. Wounds were treated with local injection of either verteporfin or vehicle control (PBS) on POD 0. We harvested unwounded skin and wounds at POD 2, 7, 14, and 30 (n=5 mice/timepoint and treatment) and subjected wound cells to three analyses: single-cell RNA-sequencing (scRNA-seq, using 10X Genomics Chromium); timsTOF, a recently-developed, high-throughput proteomic sequencing platform; and a novel machine learning algorithm for quantitatively comparing ECM ultrastructure. Results: Pseudotime analysis (Monocle3) of pooled scRNA-seq data revealed that fibroblasts followed two distinct transcriptional trajectories, one characterized by mechanical activation (En-1 lineage-positive, “fibrotic” trajectory) and the other characterized by developmental and regenerative pathways (En-1 lineage-negative; Rspo1, Dkk2/3, Trps1). Cross-platform data integration confirmed that fibroblasts in the fibrotic trajectory correlated with myofibroblast proteomic signatures (Col1a1/2, Fn1, etc.) and fibrotic/scar ECM features. In contrast, fibroblasts in the regenerative trajectory negatively correlated with myofibroblast markers and were associated with a “basket-weave” ECM pattern quantitatively indistinguishable from that of unwounded skin. Our integrated dataset suggested an important role for Wnt pathway proteins in ENF-mediated skin regeneration, so we compared POD 14 scars and regenerated wounds by multiplexed in situ hybridization (RNAScope) for Rspo1 (Wnt agonist), Trps1 (master hair follicle regulator), Ank1 (YAP target gene), and Dpp4 (EPF marker). Quantification of RNA granules across thousands of cells using a custom image analysis pipeline revealed that ENF-mediated healing (low Dpp4) in YAP-inhibited (low Ank1) wounds yielded regeneration of functional hair follicles through Wnt-mediated pathway activation (high Rpos1, Trps1). These data suggest that YAP inhibition unlocks wound regeneration via Wnt-active, En-1 lineage-negative fibroblasts. Conclusion: By studying regenerating (verteporfin-treated) versus scarring wounds across multiple healing timepoints and high-dimensional data modalities, we were able to profile fibrotic versus regenerative healing at unprecedented depth. Our integrated analysis revealed that dermal fibroblasts in these two wound settings exhibit distinct molecular trajectories defined by divergent transcriptomic, proteomic, and ultrastructural properties. Further, we found that wound regeneration in the context of verteporfin treatment is associated with suppression of mechanical signaling and activation of key Wnt pathway members including Trps1 (a gene with known hair follicle developmental roles). These results could have important implications for both the fundamental study of wound healing and potential anti-scarring therapeutic avenues
- Published
- 2021
- Full Text
- View/download PDF
10. QS1: Creeping Fat Adipocytes Drive Intestinal Fibrosis Through Adipocyte-to-fibroblast Conversion in a Novel Model of Inflammatory Bowel Disease
- Author
-
Khristian E. Bauer-Rowe, BS, Jeong Hyunh, MD, Deshka S. Foster, MD, PhD, Michelle Griffin, MD, PhD, Shamik Mascharak, BS, Heather desJardins-Park, BS, Jeffrey A. Norton, MD, FACS, and Michael T. Longaker, MD, MBA, FACS
- Subjects
Surgery ,RD1-811 - Abstract
Purpose: Crohn’s disease (CD) is a subtype of inflammatory bowel disease (IBD) characterized by patchy, transmural inflammation throughout the digestive tract and creeping fat formation. Thirty percent of CD patients develop strictures, eighty percent of which will require surgery. Creeping fat is associated with stricture formation, but its role in intestinal fibrosis remains unclear. Here, we present a novel surgical model of intestinal fibrosis and show by lineage tracing that creeping fat adipocytes convert to fibroblasts that contribute to fibrosis. Methods: We developed a novel surgical model of IBD that avoids the chronic use of caustic agents by creating a longitudinal, anti-mesenteric colotomy in the mouse transverse colon that is closed transversally. We performed Masson’s trichrome staining to assess collagen deposition. Finally, we performed lineage tracing of mature adipocytes in Adiponectin-Cre; mTmG mice and characterized adipocyte-derived cells by immunostaining. Results: Our surgical model mimics key features of human strictures, including the formation of creeping fat around the injury site, increased bowel wall thickness, collagen deposition, and transmural adipocyte infiltration by post-operative day (POD) 7. Immunostaining for adipocyte and fibroblast markers confirmed the presence of transmural adipocytes adjacent to fibroblasts. Lineage tracing of mature adipocytes in Adiponectin-Cre; mTmG mice revealed adipocyte-derived cells that infiltrate the wound site that lose expression of adipocyte lineage markers, gain expression of fibroblast markers, produce collagen, and respond to TGF-β signaling. Conclusions: Our novel surgical colotomy model represents a viable approach to study intestinal fibrosis and creeping fat without the long-term use of caustic agents. Lineage tracing of mature creeping fat adipocytes demonstrates that adipocytes convert to fibroblasts that infiltrate the injury site and participate in fibrotic responses. Taken together, these findings suggest that creeping fat contributes to intestinal fibrosis in part through the local conversion of adipocytes to fibroblasts.
- Published
- 2021
- Full Text
- View/download PDF
11. Abstract 190: Dermal Wounding Reveals Focal Adhesion Kinase Dependent Tissue-Resident Fibroblast Progenitors
- Author
-
Malini Chinta, BA, Deshka Foster, MD, MA, Alan Nguyen, Ankit Salhotra, Gunsagar Gulati, R. Chase Ransom, R. Ellen Jones, MD, Ashley L. Titan, MD, Clement D. Marshall, MD, Shamik Mascharak, Michael Hu, MD, Michael Januszyk, MD, PhD, Geoffrey C. Gurtner, MD, Derrick C. Wan, MD, Jeffrey A. Norton, MD, Howard Y. Chang, MD, PhD, Gerlinde Wernig, MD, and Michael T. Longaker, MD, MBA
- Subjects
Surgery ,RD1-811 - Published
- 2020
- Full Text
- View/download PDF
12. Abstract 188: Prrx1 Marks Ventral Fibroblasts With Increased Fibrogenic Potential
- Author
-
Mimi R. Borrelli, MBBS, MSc, Tripp Leavitt, MD, Michael S. Hu, MD, Julia T. Garcia, Michael Januszyk, MD, PhD, Alessandra L. Moore, MD, PhD, Shamik Mascharak, BS, Michelle Griffin, MD, PhD, Derrick C. Wan, MD, Hermann P. Lorenz, MD, Geoffrey C. Gurtner, MD, Howard Y. Chang, PhD, and Michael T. Longaker, MD, MA
- Subjects
Surgery ,RD1-811 - Published
- 2020
- Full Text
- View/download PDF
13. Abstract 189: Postnatal Engrailed-1 Expression Activates A Pro-Fibrotic Transcriptional Program In Wound Fibroblasts
- Author
-
Shamik Mascharak, Heather E. desJardins-Park, Mimi R. Borrelli, Alessandra L. Moore, Michael F. Davitt, Malini Chinta, Deshka S. Foster, Michael Januszyk, Sun Hyung Kwon, Gerlinde Wernig, Derrick C. Wan, H Peter Lorenz, Geoffrey C. Gurtner, and MIchael T. Longaker
- Subjects
Surgery ,RD1-811 - Published
- 2020
- Full Text
- View/download PDF
14. Abstract 79: Striae Distensae Are Rich In Mechanoresponsive And Cd26-positive Human Dermal Fibroblasts And Exhibit Increased Profibrotic Signaling
- Author
-
Mimi R. Borrelli, MBBS, MS, Dominic Henn, MD, Shamik Mascharak, BS, Ledibabari M. Ngaage, MD, Michelle Griffin, MD, PhD, Ashraf Patel, BS, Rahim Nazerali, MD, Gordon Lee, MD, Michael Januszyk, MD, PhD, Derrick C. Wan, MD, Michael T. Longaker, MD, MA, and Hermann P. Lorenz, MD
- Subjects
Surgery ,RD1-811 - Published
- 2020
- Full Text
- View/download PDF
15. Abstract 103: Cd26 Knockout And Inhibition Promotes Dorsal Wound Healing Via Modulation Of Engrailed-1 Positive Fibroblasts
- Author
-
Malini Chinta, Deshka Foster, MD, Alan Nguyen, Heather desJardins-Park, Michael Hu, MD, Shamik Mascharak, Ashley Titan, MD, Ankit Salhotra, R. Ellen Jones, MD, Oscar Leon Da Silva, Alessandra Moore, MD, Eliza Foley, Emma Briger, Jeffrey A. Norton, MD, Derrick C. Wan, MD, Michael T. Longaker, MD, MBA, and H. Peter Lorenz, MD
- Subjects
Surgery ,RD1-811 - Published
- 2020
- Full Text
- View/download PDF
16. Abstract 89: Identifying The Myeloid Subpopulation Responsible For Tissue Fibrosis Across Organ Systems Via Machine Learning Parameterization And Predictive Transcriptomics
- Author
-
David M. Stepien, MD, PhD, Simone Marini, PhD, Charles Hwang, BS, Chase A. Pagani, BA, Michael Sorkin, MD, Noelle D. Visser, MS, Amanda K. Huber, PhD, Kaetlin Vasquez, MS, Jun Li, PhD, Sarah Hatsell, PhD, Aris Economides, PhD, Shamik Mascharak, PhD, Michael T. Longaker, MD, and Benjamin Levi, MD
- Subjects
Surgery ,RD1-811 - Published
- 2020
- Full Text
- View/download PDF
17. Abstract 106: Development Of A Novel Murine Xenograft Model Of Human Foreskin As A Platform For Investigating Skin Fibrosis
- Author
-
Abra H. Shen, SB, Mimi R. Borrelli, MBBS, MSc, Shamik Mascharak, BS, Nestor M. Diaz Deleon, Sandeep Adem, MS, Derrick C. Wan, MD, Michael T. Longaker, MD, MBA, and H. Peter Lorenz, MD, FACS
- Subjects
Surgery ,RD1-811 - Published
- 2020
- Full Text
- View/download PDF
18. Abstract 186: CD36 Antagonism Minimizes Skin Scarring By Inhibiting JUN-dependent Fibrotic Pathways Within Fibrogenic Fibroblast Subpopulations
- Author
-
Mimi R. Borrelli, MBBS, MSc, Julia Garcia, PhD, Michelle Griffin, MD, PhD, Nestor M. Deleon Diaz, Alexandra L. Moore, MD, Shamik Mascharak, MS, Bryan Duoto, MS, Heather desJardins-Park, Sandeep Adem, MS, Tristan Lerbs, PhD, Marc Gastou, PhD, Lui Cui, PhD, Michael Januszyk, MD, PhD, Hermann P. Lorenz, MD, Derrick C. Wan, MD, Geoffrey C. Gurtner, MD, Howard Chang, MD, PhD, Gerlinde Wernig, MD, and Michael T. Longaker, MD, MA
- Subjects
Surgery ,RD1-811 - Published
- 2020
- Full Text
- View/download PDF
19. The Spectrum of Scarring in Craniofacial Wound Repair
- Author
-
Heather E. desJardins-Park, Shamik Mascharak, Malini S. Chinta, Derrick C. Wan, and Michael T. Longaker
- Subjects
wound healing ,wound repair ,oral mucosa ,scarring ,fibrosis ,fibroblasts ,Physiology ,QP1-981 - Abstract
Fibrosis is intimately linked to wound healing and is one of the largest causes of wound-related morbidity. While scar formation is the normal and inevitable outcome of adult mammalian cutaneous wound healing, scarring varies widely between different anatomical sites. The spectrum of craniofacial wound healing spans a particularly diverse range of outcomes. While most craniofacial wounds heal by scarring, which can be functionally and aesthetically devastating, healing of the oral mucosa represents a rare example of nearly scarless postnatal healing in humans. In this review, we describe the typical wound healing process in both skin and the oral cavity. We present clinical correlates and current therapies and discuss the current state of research into mechanisms of scarless healing, toward the ultimate goal of achieving scarless adult skin healing.
- Published
- 2019
- Full Text
- View/download PDF
20. 1: Fat Grafting Improves Dorsal Skin Fibrosis after Radiation in an Engrailed-1 Mouse Model
- Author
-
Darren B. Abbas, M.D., Evan J. Fahy, MB BCh BAO, MCh, Christopher Lavin, B.S., Michelle Griffin, MBChB, Ph.D., Sandeep Adem, M.S., Nestor M. Diaz Deleon, Shamik Mascharak, B.S., Megan King, B.S., Daniel Lee, M.D., Michael T. Longaker, M.D., M.B.A, and Derrick C. Wan, M.D.
- Subjects
Surgery ,RD1-811 - Abstract
Purpose: Fat grafting is known to rejuvenate and improve fibrosis in irradiated skin, but the underlying mechanisms behind these effects are poorly understood. We have previously identified the Engrailed-1 fibroblast sub-population as having a role in post-natal dorsal skin fibrosis in mice. Using a radiation model to the scalp of Engrailed-1 mice, we sought to better understand the regenerative effects of fat grafting in irradiated tissue. Methods: Adult (60-day old) En1Cre;R26mTmG transgenic mice (n=5) underwent total body irradiation with 9 Gy for immunodepletion. Mice were then immediately reconstituted with 2 million nucleated bone marrow cells from donor NSG(NOD.CB17-Prkdcsscid/J) mice via retro-orbital injections. Reconstitution was confirmed with fluorescence-activated cell sorting (FACS) 2 weeks after whole body irradiation. Mice scalps were then irradiated with 5 Gy every other day for 12 days (30 Gy total) and allowed to recover for 4 weeks to facilitate fibrotic conversion. Irradiated scalps were grafted with 200μL of fresh human lipoaspirate. Graph retention was measured in-vivo for 8 weeks using Micro-Computed Tomography Scanner (Bruker SkyScan 1726™) and scalp skin was harvest for histology. Results: Two weeks post bone-marrow transplant, >90% of circulating hematopoietic cells (CD45+) cells in En1Cre;R26mTmG reporter mice were non-fluorescent, signifying successful reconstitution. Volumetric analysis of fat grafting in-vivo was performed using 3-dimensional reconstruction. At 8 weeks post-grafting, 4 of the 5 grafts demonstrated >50% graft retention, confirming successful grafting. Histological sections of scalp skin 8 weeks post-grafting demonstrated significantly less En1+GFP cells compared to non-grafted scalp skin, signifying less presence of En1+ fibroblasts. Furthermore, histology demonstrated significantly less dermal thickening, epidermal thinning, and collagen deposition and disorganization in fat grafted irradiated scalp skin compared to non-grafted scalp skin. Conclusion: Fat grafting mitigates radiation-induced fibrosis in scalp skin by decreasing collagen deposition, remodeling collagen formation, decreasing epidermal thinning, and reducing presence of pro-fibrotic fibroblast sub-populations.
- Published
- 2021
- Full Text
- View/download PDF
21. Wound Healing Myofibroblasts Proliferate Clonally and in a Mechanoresponsive Manner
- Author
-
Malini Chinta, BA, Deshka Foster, MD, Alan T. Nguyen, BS, Ankit Salhotra, BS, Gunsagar Gulati, BS, Chase Ransom, MD, PhD, Shamik Mascharak, BS, R. Ellen Jones, MD, Ashley L. Titan, MD, Clement D. Marshall, MD, Michael Hu, MD, Heather E. desJardins-Park, AB, Michael Januszyk, MD, PhD, Geoffrey Gurtner, MD, Derrick C. Wan, MD, Jeffrey A. Norton, MD, Howard Y. Chang, MD, PhD, Gerlinde Wernig, MD, and Michael T. Longaker, MD, MBA
- Subjects
Surgery ,RD1-811 - Published
- 2020
- Full Text
- View/download PDF
22. Abstract 129: Transdermal Deferoxamine Mitigates Radiation-induced Skin Fibrosis
- Author
-
Mimi R. Borrelli, MBBS, MSc, Sandeep Adem, MS, Nestor M. Deleon Diaz, Shamik Mascharak, BS, Michael Januszyk, MD, PhD, Dung Nguyen, MD, Arash Momeni, MD, PhD, Geoffrey C. Gurtner, MD, Michael T. Longaker, MD, MA, and Derrick C. Wan, MD
- Subjects
Surgery ,RD1-811 - Published
- 2020
- Full Text
- View/download PDF
23. Abstract QS39: Fibroblasts Show Attenuated Wound Healing in the Setting of Dermal Melanoma
- Author
-
Oscar L. da Silva, Deshka S. Foster, MD, MA, Shamik Mascharak, BS, Alan T. Nguyen, Ashley L. Titan, MD, Ankit Salhotra, R Ellen Jones, MD, R Chase Ransom, BS, Jeffrey A. Norton, MD, and Michael T. Longaker, MD, MBA
- Subjects
Surgery ,RD1-811 - Published
- 2019
- Full Text
- View/download PDF
24. Abstract 37: Machine Learning Analysis Of Connective Tissue Networks Enables Objective Characterization Of Skin Fibroses
- Author
-
Malini Chinta, Shamik Mascharak, BA, Mimi R. Borrelli, MBBS, MSc, Alessandra L. Moore, MD, Rachel E. Brewer, Jan Sokol, Gabriela Kania, Evelyn Garibay, Deshka Foster, MD, Heather desJardins-Park, AB, Bryan Duoto, Oliver Distler, Geoffrey C. Gurtner, MD, H. Peter Lorenz, MD, Derrick C. Wan, MD, Howard Y. Chang, MD, PhD, and Michael T. Longaker, MD, MBA
- Subjects
Surgery ,RD1-811 - Published
- 2019
- Full Text
- View/download PDF
25. Abstract 2: Epigenetic Modulation of TGF-beta Signaling Underlies the Scarring Fibroblast Phenotype
- Author
-
Heather E. desJardins-Park, AB, Alessandra L. Moore, MD, Ulrike Litzenburger, PhD, Clement D. Marshall, MD, Leandra A. Barnes, AB, Shamik Mascharak, BS, Bryan Duoto, MS, Ryan C. Ransom, BS, Deshka S. Foster, MD, Michael S. Hu, MD, H. Peter Lorenz, MD, Howard Y. Chang, MD, and Michael T. Longaker, MD
- Subjects
Surgery ,RD1-811 - Published
- 2019
- Full Text
- View/download PDF
26. Abstract: A Novel Skin Whole Organ Culture Technique Maintains In Vivo Cellular Characteristics and Population Profiles
- Author
-
Heather E. desJardins-Park, AB, Alessandra L. Moore, MD, Shamik Mascharak, BS, Bryan Duoto, BS, and Michael T. Longaker, MD, MBA, FACS
- Subjects
Surgery ,RD1-811 - Published
- 2018
- Full Text
- View/download PDF
27. Abstract 45: Beyond Antibiotics: Local Doxycycline Administration Reduces Scarring and Improves Wound Healing by Modulating Scarring Fibroblast Behavior
- Author
-
Heather E. desJardins-Park, AB, Alessandra L. Moore, MD, Matthew P. Murphy, MB BCh BAO MRCSI, Dre Irizarry, MD, Bryan Duoto, BS, Deshka Foster, MD, Ruth Ellen Jones, MD, Shamik Mascharak, BS, Leandra Barnes, AB, Clement Marshall, MD, Gerlinde Wernig, MD, and Michael T. Longaker, MD, MBA, FACS
- Subjects
Surgery ,RD1-811 - Published
- 2018
- Full Text
- View/download PDF
28. Abstract 34: Analysis of Scar Forming Fibroblasts Reveals Distinct Changes in Epigenetic Accessibility During Times of Phenotypic Transition
- Author
-
Alessandra Moore, MD, Ulrike Litzenburger, PhD, Clement Marshall, MD, Ryan Chase Ransom, BS, Heather desJardins-Parks, AB, Bryan Duoto, BS, Shamik Mascharak, AB, Leandra Barnes, AB, Elizabeth Brett, MS, Mike Hu, MD MS MPH, Howard Chang, PhD, H. Peter Lorenz, MD, and Michael T. Longaker, MD MBA FACS
- Subjects
Surgery ,RD1-811 - Published
- 2018
- Full Text
- View/download PDF
29. Abstract 5: Inhibition of Mechanotransduction Yields Regenerative Wound Healing by Engrailed1-negative Fibroblasts
- Author
-
Shamik Mascharak, Alessandra L. Moore, Heather E. desJardins-Park, Maria R. Borrelli, Bryan Duoto, Malini Chinta, Deshka S. Foster, Hermann P. Lorenz, and Michael T. Longaker
- Subjects
Surgery ,RD1-811 - Published
- 2019
- Full Text
- View/download PDF
30. Abstract 43: Embryonic Expression of Prrx1 Identifies the Fibroblast Responsible for Scarring in the Mouse Ventral Dermis
- Author
-
Michael S. Hu, MD, MPH, MS, Tripp Leavitt, MD, Julia T. Garcia, PhD, Ryan C. Ransom, BS, Ulrike M. Litzenburger, PhD, Graham G. Walmsley, MD, PhD, Clement D. Marshall, MD, Alessandra L. Moore, MD, Shamik Mascharak, BS, Charles K.F. Chan, PhD, Derrick C. Wan, MD, Peter Lorenz, MD, Howard Y. Chang, MD, PhD, and Michael T. Longaker, MD, MBA
- Subjects
Surgery ,RD1-811 - Published
- 2018
- Full Text
- View/download PDF
31. Decellularized Adipose Matrices Can Alleviate Radiation-Induced Skin Fibrosis
- Author
-
Shamik Mascharak, Michelle Griffin, Ronak A. Patel, Christopher V. Lavin, Mimi R. Borrelli, Nestor M. Diaz Deleon, Michael T. Longaker, Darren B. Abbas, Evan J. Fahy, Rahim Nazerali, Sandeep Adem, Abra H. Shen, and Derrick C. Wan
- Subjects
Pathology ,medicine.medical_specialty ,Decellularization ,business.industry ,medicine.medical_treatment ,Adipose tissue ,Soft tissue ,Mice, Nude ,Radiation induced ,Critical Care and Intensive Care Medicine ,medicine.disease ,Fibrosis ,Cancer treatment ,Radiation therapy ,Mice ,Atrophy ,Adipose Tissue ,Emergency Medicine ,Medicine ,Animals ,Humans ,business ,Skin - Abstract
Objective: Radiation therapy is commonplace for cancer treatment but often results in fibrosis and atrophy of surrounding soft tissue. Decellularized adipose matrices (DAMs) have been reported to i...
- Published
- 2023
32. Modulating Cellular Responses to Mechanical Forces to Promote Wound Regeneration
- Author
-
Michael T. Longaker, Derrick C. Wan, Michael F. Davitt, Heather E. desJardins-Park, Geoffrey C. Gurtner, Shamik Mascharak, and Nicholas Guardino
- Subjects
Mammals ,Wound Healing ,integumentary system ,Swine ,business.industry ,Regeneration (biology) ,Critical Care and Intensive Care Medicine ,medicine.disease ,Bioinformatics ,Mechanotransduction, Cellular ,Cicatrix ,Fibrosis ,Emergency Medicine ,medicine ,Animals ,Humans ,Regeneration ,Hedgehog Proteins ,Wound healing ,business ,SKIN SCARRING - Abstract
Significance: Skin scarring poses a major biomedical burden for hundreds of millions of patients annually. However, this burden could be mitigated by therapies that promote wound regeneration, with...
- Published
- 2022
- Full Text
- View/download PDF
33. A Novel Xenograft Model Demonstrates Human Fibroblast Behavior During Skin Wound Repair and Fibrosis
- Author
-
Derrick C. Wan, Ledibabari Mildred Ngaage, Abra H. Shen, Hermann P. Lorenz, Nestor M. Diaz Deleon, Mimi R. Borrelli, Shamik Mascharak, Michelle Griffin, Sandeep Adem, and Michael T. Longaker
- Subjects
Pathology ,medicine.medical_specialty ,Soft Tissue Injuries ,Human skin ,Mice, SCID ,Nod ,Critical Care and Intensive Care Medicine ,Fibroblast growth factor ,Cicatrix ,Mice ,Foreskin ,Fibrosis ,Animals ,Humans ,Medicine ,Fibroblast ,Skin repair ,integumentary system ,business.industry ,Histology ,Fibroblasts ,medicine.disease ,Disease Models, Animal ,medicine.anatomical_structure ,Emergency Medicine ,Heterografts ,Fibroblast Growth Factor 2 ,Collagen ,business - Abstract
Objective: Xenografts of human skin in immunodeficient mice provide a means of assessing human skin physiology and its response to wounding. Approach: We describe a novel xenograft model using full-thickness human neonatal foreskin to examine human skin wound repair. Full-thickness 8 mm human neonatal foreskin biopsies were sutured into the dorsum of NOD scid gamma (NSG; NOD.Cg-Prkdc scidIl2rgtm1Wjl/SzJ) pups as subcutaneous grafts. At postnatal day 21 the subcutaneous grafts were exposed to cutaneous grafts. Following maturation of 2 months, xenografts were then wounded with 5 mm linear incisions and monitored until postwound day (PWD) 14 to study skin repair and fibrosis. To explore whether our model can be used to test the efficacy of topical therapies, wounded xenografts were injected with antifibrotic fibroblast growth factor 2 (FGF2) for the first four consecutive PWDs. Xenografts were harvested for analysis by histology and fluorescence-activated cell sorting (FACS). Results: Xenografts were successfully engrafted with evidence of mouse-human anastomoses and resembled native neonatal foreskin at the gross and microscopic level. Wounded xenografted skin scarred with human collagen and an expansion of CD26-positive human fibroblasts. Collagen scar was quantitated by neural network analysis, which revealed distinct clustering of collagen fiber networks from unwounded skin and wounded skin at PWD7 and PWD14. Collagen fiber networks within FGF2-treated wounds at PWD14 resembled those in untreated wounded xenografts at PWD7, suggesting that FGF2 treatment at time of wounding can reduce fibrosis. Innovation and Conclusion: This novel xenograft model can be used to investigate acute fibrosis, fibroblast heterogeneity, and the efficacy of antifibrotic agents during wound repair in human skin.
- Published
- 2022
- Full Text
- View/download PDF
34. Wound healing, fibroblast heterogeneity, and fibrosis
- Author
-
Heather E, Talbott, Shamik, Mascharak, Michelle, Griffin, Derrick C, Wan, and Michael T, Longaker
- Subjects
Wound Healing ,Genetics ,Humans ,Molecular Medicine ,Cell Biology ,Fibroblasts ,Fibrosis ,Extracellular Matrix ,Skin - Abstract
Fibroblasts are highly dynamic cells that play a central role in tissue repair and fibrosis. However, the mechanisms by which they contribute to both physiologic and pathologic states of extracellular matrix deposition and remodeling are just starting to be understood. In this review article, we discuss the current state of knowledge in fibroblast biology and heterogeneity, with a primary focus on the role of fibroblasts in skin wound repair. We also consider emerging techniques in the field, which enable an increasingly nuanced and contextualized understanding of these complex systems, and evaluate limitations of existing methodologies and knowledge. Collectively, this review spotlights a diverse body of research examining an often-overlooked cell type-the fibroblast-and its critical functions in wound repair and beyond.
- Published
- 2022
- Full Text
- View/download PDF
35. Profibrotic Signaling Pathways and Surface Markers Are Up-Regulated in Fibroblasts of Human Striae Distensae and in a Mouse Model System
- Author
-
Mimi R, Borrelli, Michelle, Griffin, Kellen, Chen, Nestor M, Deleon Diaz, Sandeep, Adem, Shamik, Mascharak, Abra H, Shen, Ledibabari Mildred, Ngaage, Nicolette, Lewis, Michael T, Longaker, Geoffrey, Gurtner, Derrick C, Wan, and H Peter, Lorenz
- Subjects
Disease Models, Animal ,Mice ,Dipeptidyl Peptidase 4 ,Animals ,Humans ,Surgery ,Fibroblasts ,Striae Distensae ,Signal Transduction ,Skin - Abstract
Striae distensae are common disfiguring cutaneous lesions but lack effective treatments because of an incomplete understanding of their pathophysiology. Dermal fibroblasts likely play an important role. The authors investigate the cellular-molecular features distinguishing fibroblasts from human striae distensae and normal skin. The authors also develop a mouse model of striae distensae.Human striae distensae and normal skin samples were compared for tensile strength and histologic structure. Fibroblasts from striae distensae and normal skin were isolated by fluorescence-activated cell sorting for gene expression analysis. Immunofluorescence staining and fluorescence-activated cell sorting were used to confirm gene expression data at the protein level. A mouse model of striae distensae formation was created by administering corticosteroids and mechanically loading the dorsal skin.Human striae distensae exhibited reduced tensile strength, more disordered collagen fibers, and epidermal atrophy compared to human normal skin. There were 296 up-regulated genes in striae distensae fibroblasts, including the profibrotic lineage and surface marker CD26. Up-regulated genes were involved in profibrotic and mechanoresponsive signaling pathways (TGFβ and FAK-PI3-AKT-signaling). In contrast, 571 genes were down-regulated, including CD74 and genes of the AMPK pathway. Increased CD26 and decreased CD74 expression was confirmed by fluorescence-activated cell sorting and immunofluorescence. Similar cutaneous histologic and gene expression changes were induced in hypercortisolemic mice by mechanically loading the dorsal skin.Fibroblasts from human striae distensae exhibit increased profibrotic and decreased antifibrotic signaling. CD26 and CD74 are promising surface markers that may be targeted therapeutically. The authors' mouse model of striae distensae can be used as a platform to test the efficacy of potential therapeutic agents.Striae distensae are common disfiguring cutaneous lesions whose etiology remains elusive, which has hindered development of effective treatment strategies. Dermal fibroblasts likely play an important role. The authors sought to elucidate the key cellular-molecular pathways distinguishing fibroblasts in striae distensae from those in normal skin.
- Published
- 2022
- Full Text
- View/download PDF
36. Piezo inhibition prevents and rescues scarring by targeting the adipocyte to fibroblast transition
- Author
-
Michelle F. Griffin, Heather E. Talbott, Nicholas J. Guardino, Jason L. Guo, Amanda F. Spielman, Kellen Chen, Jennifer B.L. Parker, Shamik Mascharak, Dominic Henn, Norah Liang, Megan King, Asha C. Cotterell, Khristian E. Bauer-Rowe, Darren B. Abbas, Nestor M. Diaz Deleon, Dharshan Sivaraj, Evan J. Fahy, Mauricio Downer, Deena Akras, Charlotte Berry, Jessica Cook, Natalina Quarto, Ophir D. Klein, H. Peter Lorenz, Geoffrey C. Gurtner, Michael Januszyk, Derrick C. Wan, and Michael T. Longaker
- Subjects
Article - Abstract
SummaryWhile past studies have suggested that plasticity exists between dermal fibroblasts and adipocytes, it remains unknown whether fat actively contributes to fibrosis in scarring. We show that adipocytes convert to scar-forming fibroblasts in response toPiezo-mediated mechanosensing to drive wound fibrosis. We establish that mechanics alone are sufficient to drive adipocyte-to- fibroblast conversion. By leveraging clonal-lineage-tracing in combination with scRNA-seq, Visium, and CODEX, we define a “mechanically naïve” fibroblast-subpopulation that represents a transcriptionally intermediate state between adipocytes and scar-fibroblasts. Finally, we show thatPiezo1orPiezo2-inhibition yields regenerative healing by preventing adipocytes’ activation to fibroblasts, in both mouse-wounds and a novel human-xenograft-wound model. Importantly,Piezo1-inhibition induced wound regeneration even inpre-existingestablished scars, a finding that suggests a role for adipocyte-to-fibroblast transition in wound remodeling, the least-understood phase of wound healing. Adipocyte-to-fibroblast transition may thus represent a therapeutic target for minimizing fibrosis viaPiezo-inhibition in organs where fat contributes to fibrosis.
- Published
- 2023
37. Quantitative Analysis of the Collagen Matrix Ultrastructure in Mouse Hearts after Myocardial Infarction
- Author
-
John Lu, Michelle Griffin, Jason L Guo, Shamik Mascharak, Nicholas J Guardino, and Michael T Longaker
- Subjects
Surgery - Published
- 2023
- Full Text
- View/download PDF
38. Allele-specific expression reveals genetic drivers of tissue regeneration in mice
- Author
-
Heather E. Talbott, Katya L. Mack, Michelle Griffin, Nicholas J. Guardino, Jennifer B.L. Parker, Amanda F. Spielman, Michael F. Davitt, Shamik Mascharak, Mark J. Berger, Derrick C. Wan, Hunter B. Fraser, and Michael T. Longaker
- Abstract
SummaryIn adult mammals, skin wounds typically heal by scarring rather than through regeneration. In contrast, “super-healer” MRL mice have the unusual ability to regenerate ear punch wounds, yet the molecular basis for this regeneration remains elusive. Here, in hybrid crosses between MRL and non-regenerating mice, we use allele-specific gene expression to identifycis-regulatory variation associated with ear regeneration. Analyzing three major wound cell populations, we identified extensive strain- and tissue- specificcis-regulatory divergence associated with differences in healing outcomes. Genes withcis-regulatory differences specifically in fibroblasts were associated with wound healing phenotypes and pathways, and were enriched near genetic markers associated with ear-healing in a genetic cross. Finally, we demonstrated that one of these genes,Cfh, could be applied ectopically to accelerate wound repair and induce regeneration in typically fibrotic wounds. Overall, our results provide insight into the molecular drivers of regeneration in MRL mice with potential clinical implications.
- Published
- 2022
- Full Text
- View/download PDF
39. Aged skeletal stem cells generate an inflammatory degenerative niche
- Author
-
Xinming Tong, Matthew P. Murphy, Thomas H. Ambrosi, Norma Neff, Owen Marecic, Malachia Y. Hoover, Fan Yang, Maurizio Morri, Debashis Sahoo, Michael T. Longaker, Yuting Wang, Rachel E. Brewer, Holly Steininger, Lauren S. Koepke, Shamik Mascharak, Eun Young Seo, Irving L. Weissman, Charles Chan, Oyinkansola Ajanaku, Michael Lopez, Gunsagar S. Gulati, Adrian McArdle, Jan Sokol, Jun Seita, Rahul Sinha, Ruth Tevlin, Stephanie D. Conley, and Laura Lu
- Subjects
Male ,Aging ,Bone Regeneration ,Stromal cell ,General Science & Technology ,1.1 Normal biological development and functioning ,Osteoclasts ,Bone Morphogenetic Protein 2 ,Biology ,Regenerative Medicine ,Article ,Bone and Bones ,Mice ,Stem Cell Research - Nonembryonic - Human ,Underpinning research ,medicine ,Animals ,Rejuvenation ,2.1 Biological and endogenous factors ,Myeloid Cells ,Cell Lineage ,Stem Cell Niche ,Aetiology ,Progenitor cell ,Bone regeneration ,Cellular Senescence ,Inflammation ,Fracture Healing ,Multidisciplinary ,Stem Cells ,Macrophage Colony-Stimulating Factor ,Inflammatory and immune system ,Mesenchymal stem cell ,Stem Cell Research ,Hematopoiesis ,Cell biology ,Haematopoiesis ,medicine.anatomical_structure ,Ageing ,Musculoskeletal ,Female ,Stem Cell Research - Nonembryonic - Non-Human ,Bone marrow ,Stem cell - Abstract
Loss of skeletal integrity during ageing and disease is associated with an imbalance in the opposing actions of osteoblasts and osteoclasts1. Here we show that intrinsic ageing of skeletal stem cells (SSCs)2 in mice alters signalling in the bone marrow niche and skews the differentiation of bone and blood lineages, leading to fragile bones that regenerate poorly. Functionally, aged SSCs have a decreased bone- and cartilage-forming potential but produce more stromal lineages that express high levels of pro-inflammatory and pro-resorptive cytokines. Single-cell RNA-sequencing studies link the functional loss to a diminished transcriptomic diversity of SSCs in aged mice, which thereby contributes to the transformation of the bone marrow niche. Exposure to a youthful circulation through heterochronic parabiosis or systemic reconstitution with young haematopoietic stem cells did not reverse the diminished osteochondrogenic activity of aged SSCs, or improve bone mass or skeletal healing parameters in aged mice. Conversely, the aged SSC lineage promoted osteoclastic activity and myeloid skewing by haematopoietic stem and progenitor cells, suggesting that the ageing of SSCs is a driver of haematopoietic ageing. Deficient bone regeneration in aged mice could only be returned to youthful levels by applying a combinatorial treatment of BMP2 and a CSF1 antagonist locally to fractures, which reactivated aged SSCs and simultaneously ablated the inflammatory, pro-osteoclastic milieu. Our findings provide mechanistic insights into the complex, multifactorial mechanisms that underlie skeletal ageing and offer prospects for rejuvenating the aged skeletal system. An analysis of skeletal stem cells in mice reveals that bone ageing occurs at the level of local niches affecting skeletal and haematopoietic lineage output, which may influence systemic aspects of multi-organ physiological ageing.
- Published
- 2021
- Full Text
- View/download PDF
40. Elucidating the fundamental fibrotic processes driving abdominal adhesion formation
- Author
-
Anoop Manjunath, Geoffrey C. Gurtner, Michael T. Longaker, Ankit Salhotra, Andrew A. Shelton, Charles P. Blackshear, Shamik Mascharak, Lu Cui, Clement D. Marshall, Tristan Lerbs, Cindy Kin, Jeffrey A. Norton, R. Ellen Jones, R. Chase Ransom, Megan E. King, Alessandra L. Moore, Malini Chinta, Gerlinde Wernig, Austin R. Burcham, Gunsagar S. Gulati, Deshka S. Foster, Michael Januszyk, Alan Nguyen, Ashley L. Titan, and Michael S. Hu
- Subjects
0301 basic medicine ,Pathology ,Gastrointestinal Diseases ,medicine.medical_treatment ,Cell ,Fluorescent Antibody Technique ,General Physics and Astronomy ,Adhesion (medicine) ,Scars ,Tissue Adhesions ,02 engineering and technology ,Mice ,Laparotomy ,Medicine ,lcsh:Science ,Cells, Cultured ,Multidisciplinary ,021001 nanoscience & nanotechnology ,Immunohistochemistry ,Bowel obstruction ,Mechanisms of disease ,medicine.anatomical_structure ,Doxycycline ,medicine.symptom ,0210 nano-technology ,medicine.medical_specialty ,Science ,Parabiosis ,PDGFRA ,Article ,General Biochemistry, Genetics and Molecular Biology ,Benzophenones ,03 medical and health sciences ,Downregulation and upregulation ,Animals ,Humans ,RNA, Messenger ,business.industry ,Isoxazoles ,General Chemistry ,Fibroblasts ,medicine.disease ,Tamoxifen ,030104 developmental biology ,Liposomes ,NIH 3T3 Cells ,lcsh:Q ,CRISPR-Cas Systems ,business - Abstract
Adhesions are fibrotic scars that form between abdominal organs following surgery or infection, and may cause bowel obstruction, chronic pain, or infertility. Our understanding of adhesion biology is limited, which explains the paucity of anti-adhesion treatments. Here we present a systematic analysis of mouse and human adhesion tissues. First, we show that adhesions derive primarily from the visceral peritoneum, consistent with our clinical experience that adhesions form primarily following laparotomy rather than laparoscopy. Second, adhesions are formed by poly-clonal proliferating tissue-resident fibroblasts. Third, using single cell RNA-sequencing, we identify heterogeneity among adhesion fibroblasts, which is more pronounced at early timepoints. Fourth, JUN promotes adhesion formation and results in upregulation of PDGFRA expression. With JUN suppression, adhesion formation is diminished. Our findings support JUN as a therapeutic target to prevent adhesions. An anti-JUN therapy that could be applied intra-operatively to prevent adhesion formation could dramatically improve the lives of surgical patients., Abdominal adhesions are a common cause of bowel obstruction, but knowledge regarding adhesion biology and anti-adhesion therapies remains limited. Here the authors report a systematic analysis of mouse and human adhesion tissues demonstrating that visceral fibroblast JUN and associated PDGFRA expression promote adhesions, and JUN suppression can prevent adhesion formation.
- Published
- 2020
41. Rewriting the Future: Promises and Limits of Germline Gene Editing in Craniofacial Surgery
- Author
-
Derrick C. Wan, Heather E. desJardins-Park, Michael T. Longaker, Michael F. Davitt, Shamik Mascharak, and Malini Chinta
- Subjects
Otorhinolaryngology ,Genome editing ,business.industry ,MEDLINE ,Medicine ,Surgery ,General Medicine ,Rewriting ,business ,Bioinformatics ,Germline ,Craniofacial surgery - Published
- 2020
- Full Text
- View/download PDF
42. Tuning Macrophage Phenotype to Mitigate Skeletal Muscle Fibrosis
- Author
-
Kaetlin Vasquez, Shawn Loder, Amanda K. Huber, Simone Marini, Michael T. Longaker, Jun Li, Ravi Kumar, Nicole J. Edwards, Benjamin Levi, Chase A. Pagani, Michael Sorkin, Carlos A. Aguilar, Noelle D. Visser, David M. Stepien, Charles Hwang, and Shamik Mascharak
- Subjects
Myeloid ,business.industry ,Immunology ,Cell ,Ischemia ,medicine.disease ,Skeletal muscle fibrosis ,medicine.anatomical_structure ,Cardiotoxin ,Fibrosis ,medicine ,Cancer research ,Immunology and Allergy ,Macrophage ,Progenitor cell ,business - Abstract
Myeloid cells are critical to the development of fibrosis following muscle injury; however, the mechanism of their role in fibrosis formation remains unclear. In this study, we demonstrate that myeloid cell–derived TGF-β1 signaling is increased in a profibrotic ischemia reperfusion and cardiotoxin muscle injury model. We found that myeloid-specific deletion of Tgfb1 abrogates the fibrotic response in this injury model and reduces fibro/adipogenic progenitor cell proliferation while simultaneously enhancing muscle regeneration, which is abrogated by adaptive transfer of normal macrophages. Similarly, a murine TGFBRII-Fc ligand trap administered after injury significantly reduced muscle fibrosis and improved muscle regeneration. This study ultimately demonstrates that infiltrating myeloid cell TGF-β1 is responsible for the development of traumatic muscle fibrosis, and its blockade offers a promising therapeutic target for preventing muscle fibrosis after ischemic injury.
- Published
- 2020
- Full Text
- View/download PDF
43. Machine Learning-Based Desmoplastic Signatures Predict Patient Outcomes in Pancreatic Ductal Adenocarcinoma
- Author
-
Jason L Guo, Shamik Mascharak, Deshka S Foster, Nicholas J Guardino, Michelle Griffin, Elisabeth Miller, Shyam Raghavan, Teri A Longacre, Jeffrey A Norton, and Michael T Longaker
- Subjects
Surgery - Published
- 2022
- Full Text
- View/download PDF
44. Integrated spatial multiomics reveals fibroblast fate during tissue repair
- Author
-
Oscar Silva, Shamik Mascharak, Heather E. Des Jardins-Park, Kellen Chen, Kathryn E. Yost, Malini Chinta, Clement D. Marshall, Derrick C. Wan, W. Tripp Leavitt, Jeffrey A. Norton, Howard Y. Chang, R. Chase Ransom, Alan T. Nguyen, Geoffrey C. Gurtner, Michael T. Longaker, Dhananjay Wagh, John A. Coller, Ankit Salhotra, Dominic Henn, Gunsagar S. Gulati, Michael Januszyk, Aaron M. Newman, Ashley L. Titan, Austin R. Burcham, R. Ellen Jones, Deshka S. Foster, Karen Tolentino, Michael S. Hu, and Gerlinde Wernig
- Subjects
Cell ,Scars ,Biology ,Mechanotransduction, Cellular ,Extracellular matrix ,Transcriptome ,Cicatrix ,Mice ,spatial epigenomics ,Cell Movement ,Fibrosis ,medicine ,Animals ,Fibroblast ,Cell Proliferation ,Skin ,Wound Healing ,Multidisciplinary ,spatial transcriptomics ,fibrosis ,Cell Differentiation ,Cell Biology ,Biological Sciences ,Fibroblasts ,medicine.disease ,Extracellular Matrix ,Chromatin ,Cell biology ,Mice, Inbred C57BL ,medicine.anatomical_structure ,chromatin accessibility ,Female ,medicine.symptom ,Wound healing ,multiomics - Abstract
Significance In the skin, tissue injury results in fibrosis in the form of a scar composed of dense extracellular matrix deposited by fibroblasts. Therapies that promote tissue regeneration rather than fibrosis remain elusive because principles of fibroblast programming and response to injury remain incompletely understood. Here, we present a multimodal -omics platform for the study of cell populations in complex tissue, which has allowed us to characterize wound healing fibroblasts across both time and space. We identify functionally distinct fibroblast subpopulations and track cell fate during the response to wounding. We demonstrate that populations of fibroblasts migrate, proliferate, and differentiate in an adaptive response to disruption of their environment. These results illustrate fundamental principles underlying the cellular response to tissue injury., In the skin, tissue injury results in fibrosis in the form of scars composed of dense extracellular matrix deposited by fibroblasts. The therapeutic goal of regenerative wound healing has remained elusive, in part because principles of fibroblast programming and adaptive response to injury remain incompletely understood. Here, we present a multimodal -omics platform for the comprehensive study of cell populations in complex tissue, which has allowed us to characterize the cells involved in wound healing across both time and space. We employ a stented wound model that recapitulates human tissue repair kinetics and multiple Rainbow transgenic lines to precisely track fibroblast fate during the physiologic response to skin injury. Through integrated analysis of single cell chromatin landscapes and gene expression states, coupled with spatial transcriptomic profiling, we are able to impute fibroblast epigenomes with temporospatial resolution. This has allowed us to reveal potential mechanisms controlling fibroblast fate during migration, proliferation, and differentiation following skin injury, and thereby reexamine the canonical phases of wound healing. These findings have broad implications for the study of tissue repair in complex organ systems.
- Published
- 2021
- Full Text
- View/download PDF
45. JUN promotes hypertrophic skin scarring via CD36 in preclinical in vitro and in vivo models
- Author
-
Jan Sokol, Shamik Mascharak, Michelle Griffin, Heather E. desJardins-Park, Howard Y. Chang, Michael T. Longaker, Yuning Wei, Abra H. Shen, Walter L. Taylor, Bryan Duoto, Mimi R. Borrelli, Tristan Lerbs, Julia T. Garcia, Lu Cui, Alessandra L. Moore, Michael Januszyk, Gerlinde Wernig, Geoffrey C. Gurtner, Marc Gastou, Ronak A. Patel, Hermann P. Lorenz, Derrick C. Wan, Kellen Chen, Sandeep Adem, Megan King, Nestor M. Diaz Deleon, and Deshka S. Foster
- Subjects
CD36 Antigens ,Pathology ,medicine.medical_specialty ,Cicatrix, Hypertrophic ,Proto-Oncogene Proteins c-jun ,CD36 ,Skin Diseases ,Article ,Mice ,In vivo ,Hypertrophic skin ,medicine ,Animals ,Humans ,Skin pathology ,Skin ,integumentary system ,biology ,Extramural ,business.industry ,General Medicine ,In vitro ,Hypertrophic scarring ,biology.protein ,business ,SKIN SCARRING - Abstract
Pathologic skin scarring presents a vast economic and medical burden. Unfortunately, the molecular mechanisms underlying scar formation remain to be elucidated. We used a hypertrophic scarring (HTS) mouse model in which Jun is overexpressed globally or specifically in α-smooth muscle or collagen type I–expressing cells to cause excessive extracellular matrix deposition by skin fibroblasts in the skin after wounding. Jun overexpression triggered dermal fibrosis by modulating distinct fibroblast subpopulations within the wound, enhancing reticular fibroblast numbers, and decreasing lipofibroblasts. Analysis of human scars further revealed that JUN is highly expressed across the wide spectrum of scars, including HTS and keloids. CRISPR-Cas9–mediated JUN deletion in human HTS fibroblasts combined with epigenomic and transcriptomic analysis of both human and mouse HTS fibroblasts revealed that JUN initiates fibrosis by regulating CD36. Blocking CD36 with salvianolic acid B or CD36 knockout model counteracted JUN-mediated fibrosis efficacy in both human fibroblasts and mouse wounds. In summary, JUN is a critical regulator of pathological skin scarring, and targeting its downstream effector CD36 may represent a therapeutic strategy against scarring.
- Published
- 2021
- Full Text
- View/download PDF
46. A Clearing Technique to Enhance Endogenous Fluorophores in Skin and Soft Tissue
- Author
-
Ashley L. Titan, Shamik Mascharak, Eliza Foley, Emma Briger, Oscar Silva, Deshka S. Foster, Alan T. Nguyen, R. Chase Ransom, R. Ellen Jones, Michael T. Longaker, Ankit Salhotra, and Malini Chinta
- Subjects
Fluorophore ,Confocal ,lcsh:Medicine ,Mice, Transgenic ,Endogeny ,Stem cells ,Benzoates ,Article ,law.invention ,Mice ,chemistry.chemical_compound ,Imaging, Three-Dimensional ,Confocal microscopy ,law ,Microscopy ,Animals ,lcsh:Science ,Fluorescent Dyes ,Skin ,Microscopy, Confocal ,Multidisciplinary ,Tissue clearing ,lcsh:R ,Soft tissue ,chemistry ,Biophysics ,lcsh:Q ,Wound healing - Abstract
Fluorescent proteins are used extensively in transgenic animal models to label and study specific cell and tissue types. Expression of these proteins can be imaged and analyzed using fluorescent and confocal microscopy. Conventional confocal microscopes cannot penetrate through tissue more than 4–6 μm thick. Tissue clearing procedures overcome this challenge by rendering thick specimens into translucent tissue. However, most tissue clearing techniques do not satisfactorily preserve expression of endogenous fluorophores. Using simple adjustments to the BABB (Benzoic Acid Benzyl Benzoate) clearing methodology, preservation of fluorophore expression can be maintained. Modified BABB tissue clearing is a reliable technique to clear skin and soft tissue specimens for the study of dermal biology, wound healing and fibrotic pathologies.
- Published
- 2019
- Full Text
- View/download PDF
47. Multiomic analysis reveals conservation of cancer-associated fibroblast phenotypes across species and tissue of origin
- Author
-
Deshka S. Foster, Michael Januszyk, Daniel Delitto, Kathryn E. Yost, Michelle Griffin, Jason Guo, Nicholas Guardino, Andrea E. Delitto, Malini Chinta, Austin R. Burcham, Alan T. Nguyen, Khristian E. Bauer-Rowe, Ashley L. Titan, Ankit Salhotra, R. Ellen Jones, Oscar da Silva, Hunter G. Lindsay, Charlotte E. Berry, Kellen Chen, Dominic Henn, Shamik Mascharak, Heather E. Talbott, Alexia Kim, Fatemeh Nosrati, Dharshan Sivaraj, R. Chase Ransom, Michael Matthews, Anum Khan, Dhananjay Wagh, John Coller, Geoffrey C. Gurtner, Derrick C. Wan, Irene L. Wapnir, Howard Y. Chang, Jeffrey A. Norton, and Michael T. Longaker
- Subjects
Cancer Research ,Oncology - Published
- 2022
- Full Text
- View/download PDF
48. Adipocytes the Forgotten Culprit in Skin Fibrosis: Exploring the Mechanism of Fat Driven Skin Fibrosis
- Author
-
Michelle Griffin, Nicholas Guardino, Amanda F Spielman, Shamik Mascharak, Jennifer B L Parker, Jason L Guo, Darren Abbas, Derrick C Wan, Khristian E Bauer-Rowe, and Michael T Longaker
- Subjects
Surgery - Published
- 2022
- Full Text
- View/download PDF
49. Engrailed-Positive Fibroblasts: The Primary Cell Type Present in Fibrotic Capsules During Foreign Body Response
- Author
-
Jennifer B Parker, Michelle Griffin, Shamik Mascharak, Amanda Faith Spielman, Asha C Cotterell, Darren Abbas, Hendrik Lintel, Michael Januszyk, Derrick C Wan, and Michael T Longaker
- Subjects
Surgery - Published
- 2022
- Full Text
- View/download PDF
50. Inhibition of Yes-Associated Protein Promotes Skin Wound Regeneration in Large Animals
- Author
-
Michael Januszyk, Heather E Talbott, Michelle Griffin, Nicholas Guardino, Amanda Spielman, Jason L Guo, Shamik Mascharak, Derrick C Wan, and Michael T Longaker
- Subjects
Surgery - Published
- 2022
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.