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The purpose of this research is to identify and characterize deleterious genetic variants in the co-stimulatory ligand B7-1, also known as the human cluster of differentiation CD80 marker. The B7-1 ligand and the major histocompatibility complex class II (MHC II) molecules are the main determinants that provide B-cells the required competency to act as antigen presenting cells. For this, participation of both MHC class II molecules and CD80 is required. The interaction of the CD80 ligand with CD28 on the surface 7 of T H cells plays a key role in the activation of TH cells and progression of B cells through the S phase, hence, leading to their proliferation in mitosis. A set of 2313 genetic variants in the B7-1 ligand have been mapped and retrieved from dbSNP database. Subsequently, 150 non-synonymous single nucleotide polymorphisms (nsSNPs) were mapped and subjected to the sequence and structural homology based predictions, which were further analyzed for protein stability and the disease phenotypes. Finally, we identified 7 potentially damaging nsSNPs in the B7-1 ligand that may affect its interaction with the cognitive receptor CD28, hence, may also interfere with TH cell activation and B cell proliferation. We propose that subsequent experimental analyses (stability, expression and interactions) on these proteins can provide a deep understanding about the effect of these variants on the structure and function of CD80. [ABSTRACT FROM AUTHOR]

Aquaporins are water channel proteins with high permeability and solute rejection, making them ideal components for the preparation of desalination biomimetic membranes. In one strategy, E. coli aquaporin Z (AqpZ) proteoliposomes are immobilized in a polyamide layer formed by interfacial polymerization at the inner surface of hollow fibers. However, once polymerization occurs, the system is almost a black box where it is difficult to disentangle the relative contribution to performance of (i) water permeation through AqpZ channels and (ii) the possible modification of the properties or structure of the polymer layer by the mere presence of protein and lipid. Indeed, the fate of protein and lipid once the polymer is formed, and how much of it is actually used, is under debate. Also, the performance of these modules has been reported to be stable over several months. This is intriguing because of the expected degradation of functional AqpZ and lipid with time. Herein, we used lipid and AqpZ, both fluorescently labeled, to unequivocally localize both components only at the inner surface of the hollow fibers. To characterize module performance, we tested about 30 half-inch modules containing five hollow fibers each. Those reconstituted with wild type AqpZ produced higher permeability (∼8.5 ± 0.9 LMH/bar) than those reconstituted with AqpZ mutant (R189A) (∼5.6 ± 1.7 LMH/bar) or lipid-only liposomes (3.7 ± 1.1 LMH/bar). However, while these differences are significant, they are smaller than expected from the comparison of relative permeabilities of membranes incorporating wild-type AqpZ, R189A mutant and only-lipid. In addition, we show that in a five-month long experiment, performance of two of these modules showed only minor deterioration, if any, which is not consistent with the observed rapid degradation of proteoliposomes at room temperature. Overall, these data obtained in this set-up suggests that although both AqpZ and lipid are localized at the inner of the hollow fibers, they mainly behave as additives that modify the properties of the robust polyamide layer. A small contribution of AqpZ channel activity to module performance is possible, but to be significant it would require full coverage and a higher protein density in the proteoliposomes, which at present cannot be achieved in the current protocol. [Display omitted] • Thirty half-inch modules (5 hollow fibers each) were tested. • Fluorescent lipid and AqpZ are only found co-localized with the IP layer. • Modules perform better with wild type AqpZ than with R189A inactive mutant. • Module performance does not directly correlate with proteoliposome permeability. • Long-term module performance is inconsistent with degradation of proteoliposomes. [ABSTRACT FROM AUTHOR]