335 results on '"Simranjeet Kaur"'
Search Results
2. Investigating the effect of synthetic cobalt and nickel oxide nanoparticles on the growth and physiology of Mungbean (Vigna radiata L.) seedlings, and exploring tunable magnetism switching behaviour
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Anjali Joshi, Simranjeet Kaur, Pargat Singh, Havneet Singh, Keya Dharamvir, Harsh Nayyar, and Gaurav Verma
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Magnetic nanoparticles ,Mung bean ,VSM ,Magnetic tuning ,Plant growth ,Botany ,QK1-989 - Abstract
The extensive application of metal oxide nanoparticles in industrial and agricultural systems has led to their pervasive accumulation in the environment, raising significant concerns about their phytotoxicity and ecological impacts. This study examines the dual effects of cobalt oxide (CoO) and nickel oxide (NiO) nanoparticles on Mungbean (Vigna radiata L.) seedlings, emphasizing their biological responses and magnetic properties for detection and monitoring applications. Seeds were treated with CoO and NiO nanoparticles at concentrations of 50 and 100 mg/L and cultivated under controlled conditions. Physiological assessments revealed substantial reductions in root growth (28–30 % for CoO; 22–24 % for NiO), shoot growth (9–17 % for CoO; 5–17 % for NiO), relative water content, and chlorophyll levels compared to untreated controls. Nanoparticle uptake and distribution across plant tissues were characterized using vibrating sample magnetometry (VSM), highlighting alterations in magnetic behavior distinct from their intrinsic properties. Structural and compositional analyses via Fourier transform infrared spectroscopy (FTIR), X-ray diffraction (XRD), and transmission electron microscopy (TEM) confirmed nanoparticle crystallinity, size, and morphology. The interaction of CoO and NiO nanoparticles with plant systems revealed significant modifications in magnetic properties, offering potential avenues for modulating plant growth through external magnetic fields. This study highlights the feasibility of utilizing magnetic oxide nanoparticles to engineer bio-nano magnetic sensors for real-time monitoring of plant health and environmental parameters. Such innovations hold promise for advancing sustainable agricultural practices and enhancing global food security through precision nanotechnology.
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- 2025
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3. Enhancing crop and water productivity of Bt cotton (Gossypium hirsutum) through drip irrigation and fertigation in semi-arid environments of south-western Punjab
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SIMRANJEET KAUR, SUDHIR KUMAR MISHRA, KULVIR SINGH, R K PAL, K K GILL, and P K KINGRA
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Bt cotton, Drip irrigation, Fertigation, Seed cotton yield, Water productivity ,Agriculture - Abstract
The experiment was conducted during 2019 and 2020 at Regional Research Station (Punjab Agricultural University, Ludhiana, Punjab), Faridkot, Punjab to evaluate the impact of different drip irrigation and fertigation regimes on Bt cotton (Gossypium hirsutum L.) (cv. RCH 773 BGII). The experiment was conducted in a randomized complete block design (RCBD) comprised of 3 drip irrigation levels (60%, 80%, and 100% of ETc); 2 fertigation doses (75% and 100% of recommended nitrogen dose), along with two extra control treatments (surface flood irrigation with 105 kg N/ha and subsurface flood irrigation with 112.5 kg N/ha). Results revealed that surface drip irrigation significantly reduced water usage by 13.9–32.3% as compared to conventional surface flood irrigation, while seed cotton yield increased by 18.2–25.2%. Notably, subsurface drip fertigation (SSDF) (100% recommended level of nitrogen applied at 80% ETc) exhibited the potential to conserve about 8.9–25.7% of total water applied, besides boosting crop yield by 37.2%. In conclusion, this study elucidated better crop and water productivity with subsurface drip followed by surface drip irrigation as compared to traditional surface flood irrigation and manual fertilizer application. Therefore, adoption of drip irrigation systems for water and nitrogen application needs to be advocated for sustainable cotton cultivation.
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- 2024
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4. Unveiling the menstrual mind: Exploring proprioceptive proficiency, reaction responsiveness, and motor mastery in premenstrual syndrome versus Non-PMS cohorts: A two-arm parallel non-blinded cross-sectional study
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Anshu Sharma, Simranjeet Kaur, Parveen Kumar, and Nidhi Sharma
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Coordination ,Neuromuscular manifestations ,Pre-menstrual syndrome ,Proprioception ,Reaction time ,Public aspects of medicine ,RA1-1270 - Abstract
Introduction: Premenstrual syndrome (PMS) is characterized by cyclical physical and mood disturbances during the luteal phase. Symptoms gradually intensify during this phase and typically subside a few days after menstruation begins. PMS encompasses neuromuscular and psychological symptoms that can significantly affect the quality of life of affected females. This study aims to compare proprioception, reaction time, and coordination between females with PMS and those with non-PMS. Material and methods: A cross-sectional study, conducted in accordance with the Strengthening the Reporting of Observational Studies in Epidemiology (STROBE) guidelines, recruited 998 females with PMS and without PMS, aged 18–40 years based on premenstrual dysphoric disorder criteria. Participants underwent assessments of proprioception and reaction time using the Sensbalance Miniboard. Coordination was assessed using Lower Extremity Motor Coordination Test. Data analysis utilized the Kolmogorov-Smirnov test to determine the normality of the data while Mann Whitney-U test was used to compare the between group differences of the variables. Results: Significant differences were observed with p-value
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- 2024
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5. Utilizing Short Interspersed Nuclear Element as a Genetic Marker for Pre-Harvest Sprouting in Wheat
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Purnima Kandpal, Karminderbir Kaur, Raman Dhariwal, Simranjeet Kaur, Gagandeep Kaur Brar, Harpinder Randhawa, and Jaswinder Singh
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pre-harvest sprouting ,Argonaute ,SINE ,epigenetics ,dormancy ,DNA methylation ,Botany ,QK1-989 - Abstract
Pre-harvest sprouting (PHS) is a complex abiotic stress caused by multiple exogenous and endogenous variables that results in random but significant quality and yield loss at the terminal crop stage in more than half of the wheat-producing areas of the world. Systematic research over more than five decades suggests that addressing this challenge requires tools beyond the traditional genetic manipulation approach. Previous molecular studies indicate a possible role of epigenetics in the regulation of seed dormancy and PHS in crops, especially through RNA-directed DNA methylation (RdDM) pathways mediated by Argonaute (AGO) proteins. In this study, we explore the role of the AGO802B gene associated with PHS resistance in wheat, through the presence of a SINE retrotransposon insertion. The current study found the SINE insertion at 3′UTR of the TaAGO802B present in 73.2% of 41 cultivars analyzed and in 92.6% of the resistant cultivar subset. The average expression of TaAGO802B in cultivars with the SINE insertion was 73.3% lower than in cultivars without insertion. This study also indicated a significant positive correlation between the PHS score and methylation levels in the cultivars. The resistant cultivars with the SINE insertion recorded 54.7% lower methylation levels than susceptible cultivars. Further analysis of a DH population (Sadash × P2711) reveals that SINE insertion co-segregates with PHS resistance. This sets forth the SINE insertion in TaAGO802B as a genetic marker for screening wheat germplasm and as an efficient tool for breeding PHS-resistant wheat cultivars.
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- 2024
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6. Microbial antagonists: diversity, formulation and applications for management of pest–pathogens
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Rajeshwari Negi, Babita Sharma, Simranjeet Kaur, Tanvir Kaur, Sofia Sharief Khan, Sanjeev Kumar, Seema Ramniwas, Sarvesh Rustagi, Sangram Singh, Ashutosh Kumar Rai, Divjot Kour, Neelam Thakur, and Ajar Nath Yadav
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Agricultural sustainability ,Bioformulations ,Microbial signaling ,Pesticides ,Plant microbes ,Agriculture - Abstract
Abstract Agriculture is the backbone of developing countries, which plays an essential role in primary drivers of economy. The increasing use of chemical fertilizers and toxic insecticides endangers the health of human, plant soils, and the environment. Microbial insecticides have been implemented in current scenario for crop protection. Biological agents for pest control have gained more attention in recent year as substitutes for management of pests and pathogens. It provides a sustainable approach to plant health management and assists to minimize the excessive applications of toxic substances. The antagonistic microbes belong to six different phyla including Bacillota, Actinomycetota, Pseudomonadota, Bacteroidota and Mucoromycota. Microbial pesticides have been developed through a number of processes, including extraction of pure culture and screening using effectiveness bioassays under controlled and natural conditions. Biological control agents (BCAs) are recognized to be the most sophisticated technology for environmentally friendly agriculture. The various beneficial BCAs have been reported for the management of plant health, but they required effective acceptance together with the standardization of bioformulation. The present review deals with the recent development of microbial control agents, mechanisms of actions, development of microbial pesticides and their potential applications for agricultural productivity.
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- 2023
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7. The Impact of Regular Physical Activity on the Mental Health and Well-Being of Dementia Patients in High-Income Countries—A Systematic Scoping Review
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Simranjeet Kaur, Sai Hyma Sree Cherukuri, Sheikh Mahbub Murshed, Adiyasuren Purev-Ochir, Erini Abdelmassih, and Fahad Hanna
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dementia ,physical activity ,mental health ,well-being ,falls ,cognition ,Geriatrics ,RC952-954.6 - Abstract
Background: Dementia is a term used to describe a group of symptoms impacting memory, thinking, and social abilities. Evidence suggests a positive role of physical activity in physical and mental well-being in general. This systematic scoping review aimed to gather, summarise, and analyse evidence of the impact of physical activity on the mental health and well-being of dementia patients. Methods: A comprehensive systematic search of mainly primary research was conducted using several databases. Peer-reviewed studies in high-income countries published between 2005 and 2023 were included. The systematic scoping review was performed using the framework outlined by the Joanna Briggs Institute (JBI) and reported using the Preferred Reporting Items for Systematic Reviews and Meta-Analyses extension for Scoping Reviews (PRISMA-ScR) statement. Results: Twenty-four articles (including 93,984 participants) were included in the analysis. Most articles (21) reported that physical activity (particularly regular physical activity) is associated with decreased depression score, decreased cognition impairment, and fewer falls, all of which contributed to improved well-being among dementia patients. These studies showed that there is a significant positive relationship between the level of physical activity and the level of improvement in the mental health and well-being of dementia patients. Conclusions: Findings from this systematic scoping review provide relatively reliable evidence that regular physical activity may improve the mental health and well-being of dementia patients. Systematic reviews and meta-analyses may be required to further confirm these findings.
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- 2024
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8. Microbes mediated induced systemic response in plants: A review
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Divjot Kour, Rajeshwari Negi, Sofia Sharief Khan, Sanjeev Kumar, Simranjeet Kaur, Tanvir Kaur, Babita Sharma, Hemant Dasila, Harpreet Kour, Seema Ramniwas, Kundan Kumar Chaubey, Deepesh Kumar Neelam, and Ajar Nath Yadav
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Biocontrol ,Elicitors ,Hormonal regulation ,ISR ,Microbes ,Molecular mechanisms ,Plant ecology ,QK900-989 - Abstract
Biotic stress affects economically important crop species and leads to quality and yield losses. Plants exhibit the ability of responding to the pathogen attack by synthesizing compounds which leads to either the inhibition or reduction of disease incidence. Plants live in close association with microbial communities. Microbes and their metabolites impact the health of the plants by supplying mineral nutrients, hormonal modulation and protection from the pathogenic organisms. Induced systemic response is one of the major mechanisms employed by the microbes in biocontrol. Beneficial microbes release certain compounds as elicitors in the rhizospheric region which are perceived by the plant roots as signals that increase the defense and resistance of the plants against the phytopathogens. The phytohormones such as ethylene, jasmonic acid, and salicylic acid are involved in regulation of the induced defense responses. The present review highlights the negative impact of the biotic stress on the plants and how induced systemic response is induced in the plants further discussing the role of the microbial elicitors in induced systemic response, their molecular mechanisms and hormonal regulation and draws the attention of the scientific community to explore new microbial elicitors as disease control alternatives.
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- 2024
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9. Fuzzy Prosthesis
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Sushma Ashok Singh, Simranjeet Kaur Manni, and Swagatika Mishra
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Medicine (General) ,R5-920 - Abstract
Artificial Intelligence AI and Machine Learning ML have paved the pathway for a brighter techy future in the field of Prosthetics by acting as a boon for Persons with DisabilityPeoples with Determination PwDs. Biomechanotronics is a branch of mechanotronics and involves four main units. This can be integrated with artificial intelligence for better results and user experiences. We have discussed microprocessor knee joint for better insight into this concept.
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- 2024
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10. Reliability and reference norms of heel-to-toe walking, lateral walking, and step-over walking among young adults: a cross-sectional study
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Nidhi Sharma, Simranjeet Kaur, and Parveen Kumar
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adolescent ,cross-sectional study ,equilibrium ,Medicine - Published
- 2023
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11. Eco-friendly management of Spodoptera litura (Lepidoptera: Noctuidae) in tomato under polyhouse and field conditions using Heterorhabditis bacteriophora Poinar, their associated bacteria (Photorhabdus luminescens), and Bacillus thuringiensis var. kurstaki
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Neelam Thakur, Preety Tomar, Jaspreet Kaur, Simranjeet Kaur, Anuja Sharma, Samiksha Jhamta, Ajar Nath Yadav, Harcharan Singh Dhaliwal, Rajesh Thakur, and Seema Thakur
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Spodoptera litura ,Bioassay ,Entomopathogens ,Management ,Tomato ,Agriculture - Abstract
Abstract Background Insect pests cause substantial agriculture losses annually, and their regulation through chemical pesticides instigates a prolonged detrimental impact on the environment and human health. The upsurge in difficulties such as pesticide residue, soil degradation and pest resistance acted as the pacesetter for research on biological control with a prime focus on entomopathogens. To aid in knowing the biocontrol potential of these creatures, the present work deals with the applications of entomopathogenic nematode Heterorhabditis bacteriophora EUPT-SD, and entomopathogenic bacteria (EPBs) Photorhabdus luminescens and Bacillus thuringiensis var. kurstaki against the 4th larval instar of Spodoptera litura (Fabricius) (Lepidoptera: Noctuidae) in the laboratory experiment, polyhouse as well as field condition. Results The results demonstrated that EPB, P. luminescens, caused the highest 100% larval mortality at the highest concentration of 5 × 102 CFU/ml after 96 h of infection, followed by B. thuringiensis var. kurstaki which resulted in 98% at a concentration of 5 × 102 CFU/ml and 92% mortality at the treatment with H. bacteriophora EUPT-SD (140IJs/ml) under laboratory bioassay study. In the polyhouse and field evaluation tests, again the P. luminescens was recorded as the most effective, followed by B. thuringiensis and H. bacteriophora, respectively. It was found that the treated plots experienced lesser damage when compared to non-treated plots. Conclusion Applications of these pathogens are nature friendly and are a proficient alternative to synthetic chemical insecticides. It is suggested from the present investigation that the use of P. luminescens was the best biocontrol agent to overcome the local pest problems of this region because it is safe for animals, humans, non-target insect pests, plants, as well as for the environment.
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- 2023
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12. Production of Alginate Oligosaccharides (AOSs) Using Enhanced Physicochemical Properties of Immobilized Alginate Lyase for Industrial Application
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Simranjeet Kaur, Reinu E. Abraham, Christopher M. M. Franco, and Munish Puri
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immobilization ,alginate lyase ,magnetic nanoparticle ,alginate oligosaccharides (AOSs) ,nanomaterial ,Biology (General) ,QH301-705.5 - Abstract
Alginate lyase (AL) is a polysaccharide-degrading enzyme that can degrade alginate by hydrolyzing glycosidic bonds and produces unsaturated alginate oligosaccharides (AOSs). These AOSs have wide therapeutic and nutraceutical applications. However, to produce alginate oligosaccharides in a cost-effective manner is challenging due to the low availability and high cost of this degrading enzyme. Immobilization of the enzyme facilitates industrial applications owing to its stability, reusability, and cost-effectiveness. This study was focused on the enhancement of the properties of alginate lyase and improvement of the production of AOS. Alginate lyase was immobilized on magnetic nanoparticles (NPs) using glutaraldehyde as the crosslinker. The study showed that the maximum binding achieved between NPs and protein in the enzyme was 71% at a ratio of 1:150 NP:protein. As a result of immobilization, the optimum activity of free enzyme which was obtained at 37 °C and pH 7.4 changed to 45 °C and pH 9. Furthermore, the enzyme was thermostable at 45 °C for 3 h with up to 50% reusability for six consecutive cycles. Storage stability after 15 days showed ~67% relative hydrolysis of alginate. The free alginate lyase (25 IU) showed 76% raw biomass (seaweed) hydrolysis which is higher compared to 63% provided by the immobilized enzyme. As a result of efficient hydrolysis, AOSs with molecular weight profile of 370–1040 kDa were produced and detected using HPLC.
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- 2024
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13. Synergistic effect of entomopathogens against Spodoptera litura (Fabricius) under laboratory and greenhouse conditions
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Neelam Thakur, Preety Tomar, Sakshi Sharma, Simranjeet Kaur, Sushma Sharma, Ajar Nath Yadav, and Abd El-Latif Hesham
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Bacillus thuringiensis ,Beauveria bassiana ,Bio-efficacy ,Heterorhabditis bacteriophora ,Spodoptera litura ,Agriculture - Abstract
Abstract Background Entomopathogens such as nematodes, bacteria and fungi are well recognized for their biocontrol potential. This study was carried out to examine the insecticidal properties of the Heterorhabditis bacteriophora Poinar, Beauveria bassiana Balsamo-Crivelli, Bacillus thuringiensis Berliner, individually and in combination against 3rd instar larvae of Spodoptera litura Fabricius (Noctuidae: Lepidoptera) under controlled laboratory and greenhouse conditions at Eternal University, Baru Sahib, Sirmaur, Himachal Pradesh. Results The results demonstrated that the combined applications of the tested entomopathogens resulted in 100% insect mortality under the laboratory conditions. Among the individual concentrations, applications of 200 IJs/ml were noticed highly virulent with (98%) mortality, followed by B. thuringiensis (96%) and then by B. bassiana (92%). However, single treatments were also evaluated that further showed a highest mortality in the target pest by H. bacteriophora, followed by B. thuringiensis. Among the combined treatments by H. bacteriophora plus B. thuringiensis (200 IJs + 1 × 1012 CFU/cm2) more effective caused (100%) mortality were noticed in the laboratory and (28%) under the greenhouse conditions than H. bacteriophora plus B. bassiana (200 IJs + 1 × 1010 conidia/cm2) that caused (100%) mortality and (34%) damage under both, laboratory and greenhouse conditions. Conclusion Laboratory bioassay and greenhouse evaluation tests demonstrated that the combined sprayed treatments showed reliable and fast synergism. This study could be recommended to the farmers to control the pest.
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- 2022
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14. Book Review of Duran, C. S. (2017). Language and literacy in refugee families. Palgrave MacMillan.
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Simranjeet Kaur
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Education - Abstract
Not
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- 2023
15. Characterization of the functional and transcriptomic effects of pro-inflammatory cytokines on human EndoC-βH5 beta cells
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Caroline Frørup, Rebekka Gerwig, Cecilie Amalie Søndergaard Svane, Joana Mendes Lopes de Melo, Kristine Henriksen, Tina Fløyel, Flemming Pociot, Simranjeet Kaur, and Joachim Størling
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pancreatic beta cells ,type 1 diabetes ,model system ,inflammation ,apoptosis ,insulin ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
ObjectiveEndoC-βH5 is a newly established human beta-cell model which may be superior to previous model systems. Exposure of beta cells to pro-inflammatory cytokines is widely used when studying immune-mediated beta-cell failure in type 1 diabetes. We therefore performed an in-depth characterization of the effects of cytokines on EndoC-βH5 cells.MethodsThe sensitivity profile of EndoC-βH5 cells to the toxic effects of interleukin-1β (IL-1β), interferon γ (IFNγ) and tumor necrosis factor-α (TNFα) was examined in titration and time-course experiments. Cell death was evaluated by caspase-3/7 activity, cytotoxicity, viability, TUNEL assay and immunoblotting. Activation of signaling pathways and major histocompatibility complex (MHC)-I expression were examined by immunoblotting, immunofluorescence, and real-time quantitative PCR (qPCR). Insulin and chemokine secretion were measured by ELISA and Meso Scale Discovery multiplexing electrochemiluminescence, respectively. Mitochondrial function was evaluated by extracellular flux technology. Global gene expression was characterized by stranded RNA sequencing.ResultsCytokines increased caspase-3/7 activity and cytotoxicity in EndoC-βH5 cells in a time- and dose-dependent manner. The proapoptotic effect of cytokines was primarily driven by IFNγ signal transduction. Cytokine exposure induced MHC-I expression and chemokine production and secretion. Further, cytokines caused impaired mitochondrial function and diminished glucose-stimulated insulin secretion. Finally, we report significant changes to the EndoC-βH5 transcriptome including upregulation of the human leukocyte antigen (HLA) genes, endoplasmic reticulum stress markers, and non-coding RNAs, in response to cytokines. Among the differentially expressed genes were several type 1 diabetes risk genes.ConclusionOur study provides detailed insight into the functional and transcriptomic effects of cytokines on EndoC-βH5 cells. This information should be useful for future studies using this novel beta-cell model.
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- 2023
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16. Isotropization of embedding Class I spacetime and anisotropic system generated by complexity factor in the framework of gravitational decoupling
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S. K. Maurya, M. Govender, Simranjeet Kaur, and Riju Nag
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Astrophysics ,QB460-466 ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 - Abstract
Abstract In this work, we present a hierarchical solution-generating technique employing the Minimum Gravitational Decoupling (MGD) Method and the generalized concept of Complexity as applied to Class I spacetime for bounded compact objects in classical general relativity. Starting off with an anisotropic seed solution described by Class I spacetime, we apply the MGD technique with the constraint that the effective anisotropy vanishes which leads to an isotropic model. In addition, we produce a second family of solutions in which the Complexity factor [Herrera (Phys Rev D 97:044010, 2018)] for the seed solution and its MGD counterpart are the same. We discuss the physical plausibility of both classes of solutions as candidates for physically realizable compact objects.
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- 2022
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17. Screenshotting What’s Important in Video Data: An Experiment in Collaborative, Subjective Analysis of Artifactual, Cultural Research with Children
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Diane R. Collier, Simranjeet Kaur, Melissa McKinney-Lepp, and Zachary J. Rondinelli
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Social sciences (General) ,H1-99 - Abstract
When using video and visual methods in qualitative and post-qualitative research, the size and scale of the data set can be overwhelming, particularly for new researchers. Collaborative research teams often work with a code book to systematize and unify their analyses. Interpretive researchers pursuing multi-layered and multi-voiced visual analysis often find it difficult to move away from desires for a single ‘best’ interpretation of what happened. This paper illustrates and interrogates an open and flexible method for ‘thinning’ (screenshotting) video data that we call the ‘Five Images Method’. We offer one unfolding of interpretive processes and tensions and examine how four researchers worked across positionalities to analyse video data. We start with our positionalities in relation to a research study of children creating photographic and written stories of cultural artifacts, carried out over one year. The primary data from the study was generated through online video-conference sessions connecting a university researcher with an elementary class. A second level of data was created through a process of screenshotting, followed by recursive cycles of conversation about the choices of each researcher, and how they were guided by background, geography, roles in relation to child participants, technologies, personal experiences, and so on. Two key incidents that illustrate the potential of the method and the interpretations produced are described. We argue that reducing video data in this way can be both generative and limiting, while also serving as a catalyst for enhanced analysis. The collaborations and relationships built in research teams through slow processes of analysis (and writing!) working across difference also promote evocative and layered learning. Looking at interpretations as multiple can be hampered by longstanding histories of research as intended to produce authentic and singular truths.
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- 2023
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18. Comments on: Bilateral Movement- Based Computer Games Improve Sensorimotor Functions in Subacute Stroke Survivors: A Randomized Controlled Trial
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Simranjot Kaur, Parveen Kumar, Simranjeet Kaur, and Nidhi Sharma
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Therapeutics. Pharmacology ,RM1-950 - Published
- 2023
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19. MAD2L2 dimerization and TRIP13 control shieldin activity in DNA repair
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Inge de Krijger, Bastian Föhr, Santiago Hernández Pérez, Estelle Vincendeau, Judit Serrat, Alexander Marc Thouin, Vivek Susvirkar, Chloé Lescale, Inés Paniagua, Liesbeth Hoekman, Simranjeet Kaur, Maarten Altelaar, Ludovic Deriano, Alex C. Faesen, and Jacqueline J. L. Jacobs
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Science - Abstract
MAD2L2 — a member of the shieldin complex — is known to play important roles in DNA repair. Here the authors demonstrate how MAD2L2 dimerization mediated through SHLD2 participates in shieldin assembly and function.
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- 2021
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20. Impact of metal oxide nanoparticles on cotton (Gossypium hirsutum L.): a physiological perspective
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Ravinderdeep SINGH BRAR, Avneesh KUMAR, Simranjeet KAUR, Sandip SAHA, Anuj KUMAR, and Sandeep KUMAR
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Cotton ,Bt-transgenic ,Nanoparticles ,Metal oxide nanoparticles ,Phytohormones ,Superoxide dismutase ,Plant culture ,SB1-1110 - Abstract
Abstract Cotton production substantiated a crucial part in the escalating economic development of many countries. To realize the increasing global demand for cotton, the emphasis should be laid on to improve cotton fiber growth and production. The bioengineered transgenic cotton proved expedient in resolving inadequacies of conventional cotton, but still required improvements to encounter heightened demand of textile industries. One possible solution pertaining to this has been provided by nanoscience in the form of metal or metal oxide nanoparticles. These metal oxide nanoparticles have easy access to the various parts of cotton plants through its transportation system, and thus significantly influence several parameters relative to the growth and production of cotton fiber. This review summarizes the distribution and accumulation of metal oxide nanoparticles in cotton plant and its impact on different plant growth-promoting factors, which resulted in the improved cotton yields. Graphical abstract Metal/metal-oxide nanoparticles have easy access to the various parts of cotton plant through its transportation system, and thus significantly influence its growth parameters, and hence the production of cotton fiber. This review summarizes the distribution and accumulation of metal oxide nanoparticles in cotton plants, and its impact on different plant growth promoting factors.
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- 2021
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21. Simeprevir Potently Suppresses SARS-CoV‑2 Replication and Synergizes with Remdesivir
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Ho Sing Lo, Kenrie Pui Yan Hui, Hei-Ming Lai, Xu He, Khadija Shahed Khan, Simranjeet Kaur, Junzhe Huang, Zhongqi Li, Anthony K. N. Chan, Hayley Hei-Yin Cheung, Ka-Chun Ng, John Chi Wang Ho, Yu Wai Chen, Bowen Ma, Peter Man-Hin Cheung, Donghyuk Shin, Kaidao Wang, Meng-Hsuan Lee, Barbara Selisko, Cecilia Eydoux, Jean-Claude Guillemot, Bruno Canard, Kuen-Phon Wu, Po-Huang Liang, Ivan Dikic, Zhong Zuo, Francis K. L. Chan, David S. C. Hui, Vincent C. T. Mok, Kam-Bo Wong, Chris Ka Pun Mok, Ho Ko, Wei Shen Aik, Michael Chi Wai Chan, and Wai-Lung Ng
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Chemistry ,QD1-999 - Published
- 2021
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22. Publisher Correction: Eco-friendly management of Spodoptera litura (Lepidoptera: Noctuidae) in tomato under polyhouse and field conditions using Heterorhabditis bacteriophora Poinar, their associated bacteria (Photorhabdus luminescens), and Bacillus thuringiensis var. kurstaki
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Neelam Thakur, Preety Tomar, Jaspreet Kaur, Simranjeet Kaur, Anuja Sharma, Samiksha Jhamta, Ajar Nath Yadav, Harcharan Singh Dhaliwal, Rajesh Thakur, and Seema Thakur
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Agriculture - Published
- 2023
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23. β Cell and Autophagy: What Do We Know?
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Hamid-Reza Mohammadi-Motlagh, Mona Sadeghalvad, Niloofar Yavari, Rosita Primavera, Setareh Soltani, Shashank Chetty, Abantika Ganguly, Shobha Regmi, Tina Fløyel, Simranjeet Kaur, Aashiq H. Mirza, Avnesh S. Thakor, Flemming Pociot, and Reza Yarani
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β cell ,autophagy ,insulin homeostasis ,autophagy modulators ,type 1 diabetes ,type 2 diabetes ,Microbiology ,QR1-502 - Abstract
Pancreatic β cells are central to glycemic regulation through insulin production. Studies show autophagy as an essential process in β cell function and fate. Autophagy is a catabolic cellular process that regulates cell homeostasis by recycling surplus or damaged cell components. Impaired autophagy results in β cell loss of function and apoptosis and, as a result, diabetes initiation and progress. It has been shown that in response to endoplasmic reticulum stress, inflammation, and high metabolic demands, autophagy affects β cell function, insulin synthesis, and secretion. This review highlights recent evidence regarding how autophagy can affect β cells’ fate in the pathogenesis of diabetes. Furthermore, we discuss the role of important intrinsic and extrinsic autophagy modulators, which can lead to β cell failure.
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- 2023
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24. Plasma Exosome-Enriched Extracellular Vesicles From Lactating Mothers With Type 1 Diabetes Contain Aberrant Levels of miRNAs During the Postpartum Period
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Caroline Frørup, Aashiq H. Mirza, Reza Yarani, Lotte B. Nielsen, Elisabeth R. Mathiesen, Peter Damm, Jens Svare, Christian Engelbrekt, Joachim Størling, Jesper Johannesen, Henrik B. Mortensen, Flemming Pociot, and Simranjeet Kaur
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extracellular vesicles ,exosomes ,miRNAs ,plasma ,small RNA-Seq ,type 1 diabetes ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Type 1 diabetes is an immune-driven disease, where the insulin-producing beta cells from the pancreatic islets of Langerhans becomes target of immune-mediated destruction. Several studies have highlighted the implication of circulating and exosomal microRNAs (miRNAs) in type 1 diabetes, underlining its biomarker value and novel therapeutic potential. Recently, we discovered that exosome-enriched extracellular vesicles carry altered levels of both known and novel miRNAs in breast milk from lactating mothers with type 1 diabetes. In this study, we aimed to characterize exosomal miRNAs in the circulation of lactating mothers with and without type 1 diabetes, hypothesizing that differences in type 1 diabetes risk in offspring from these groups are reflected in the circulating miRNA profile. We performed small RNA sequencing on exosome-enriched extracellular vesicles extracted from plasma of 52 lactating mothers around 5 weeks postpartum (26 with type 1 diabetes and 26 age-matched controls), and found a total of 2,289 miRNAs in vesicles from type 1 diabetes and control libraries. Of these, 176 were differentially expressed in plasma from mothers with type 1 diabetes (167 upregulated; 9 downregulated, using a cut-off of abs(log2FC) >1 and FDR adjusted p-value
- Published
- 2021
- Full Text
- View/download PDF
25. Pro-Inflammatory Cytokines Promote the Transcription of Circular RNAs in Human Pancreatic β Cells
- Author
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Simranjeet Kaur, Caroline Frørup, Aashiq H. Mirza, Tina Fløyel, Reza Yarani, Maikel L. Colli, Jesper Johannesen, Joachim Størling, Decio L. Eizirik, and Flemming Pociot
- Subjects
non-coding RNA ,type 1 diabetes ,circRNA ,miRNA ,human islets ,microarray ,Genetics ,QH426-470 - Abstract
Circular RNAs (circRNAs) have recently been implicated in impaired β-cell function in diabetes. Using microarray-based profiling of circRNAs in human EndoC-βH1 cells treated with pro-inflammatory cytokines, this study aimed to investigate the expression and possible regulatory roles of circRNAs in human β cells. We identified ~5000 β-cell-expressed circRNAs, of which 84 were differentially expressed (DE) after cytokine exposure. Pathway analysis of the host genes of the DE circRNAs revealed the enrichment of cytokine signaling pathways, indicative of circRNA transcription from inflammatory genes in response to cytokines. Multiple binding sites for β-cell-enriched microRNAs and RNA-binding proteins were observed for the highly upregulated circRNAs, supporting their function as ‘sponges’ or ‘decoys’. We also present evidence for circRNA sequence conservation in multiple species, the presence of cytokine-induced regulatory elements, and putative protein-coding potential for the DE circRNAs. This study highlights the complex regulatory potential of circRNAs, which may play a crucial role during immune-mediated β-cell destruction in type 1 diabetes.
- Published
- 2022
- Full Text
- View/download PDF
26. A Dual Systems Genetics Approach Identifies Common Genes, Networks, and Pathways for Type 1 and 2 Diabetes in Human Islets
- Author
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Simranjeet Kaur, Aashiq H. Mirza, Anne J. Overgaard, Flemming Pociot, and Joachim Størling
- Subjects
type 1 diabetes ,type 2 diabetes ,genetics ,network analysis ,human islets ,Genetics ,QH426-470 - Abstract
Type 1 and 2 diabetes (T1/2D) are complex metabolic diseases caused by absolute or relative loss of functional β-cell mass, respectively. Both diseases are influenced by multiple genetic loci that alter disease risk. For many of the disease-associated loci, the causal candidate genes remain to be identified. Remarkably, despite the partially shared phenotype of the two diabetes forms, the associated loci for T1D and T2D are almost completely separated. We hypothesized that some of the genes located in risk loci for T1D and T2D interact in common pancreatic islet networks to mutually regulate important islet functions which are disturbed by disease-associated variants leading to β-cell dysfunction. To address this, we took a dual systems genetics approach. All genes located in 57 T1D and 243 T2D established genome-wide association studies (GWAS) loci were extracted and filtered for genes expressed in human islets using RNA sequencing data, and then integrated with; (1) human islet expression quantitative trait locus (eQTL) signals in linkage disequilibrium (LD) with T1D- and T2D-associated variants; or (2) with genes transcriptionally regulated in human islets by pro-inflammatory cytokines or palmitate as in vitro models of T1D and T2D, respectively. Our in silico systems genetics approaches created two interaction networks consisting of densely-connected T1D and T2D loci genes. The “T1D-T2D islet eQTL interaction network” identified 9 genes (GSDMB, CARD9, DNLZ, ERAP1, PPIP5K2, TMEM69, SDCCAG3, PLEKHA1, and HEMK1) in common T1D and T2D loci that harbor islet eQTLs in LD with disease-associated variants. The “cytokine and palmitate islet interaction network” identified 4 genes (ASCC2, HIBADH, RASGRP1, and SRGAP2) in common T1D and T2D loci whose expression is mutually regulated by cytokines and palmitate. Functional annotation analyses of the islet networks revealed a number of significantly enriched pathways and molecular functions including cell cycle regulation, inositol phosphate metabolism, lipid metabolism, and cell death and survival. In summary, our study has identified a number of new plausible common candidate genes and pathways for T1D and T2D.
- Published
- 2021
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- View/download PDF
27. The emerging role of lncRNAs in inflammatory bowel disease
- Author
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Reza Yarani, Aashiq H. Mirza, Simranjeet Kaur, and Flemming Pociot
- Subjects
Medicine ,Biochemistry ,QD415-436 - Abstract
Inflammatory bowel disease: The role of noncoding RNA Studying long noncoding RNAs (lncRNAs) may improve diagnosis and treatment of inflammatory bowel disease (IBD). These RNAs are found between genes in DNA regions previously thought to be “junk,” and have recently been shown to be important in development of various diseases. IBD, which includes both Crohn’s disease and ulcerative colitis, damages the digestive tract lining, causing pain and chronic diarrhea. A better understanding of IBD’s complex causes is needed to identify more effective treatments. Flemming Pociot at the Steno Diabetes Center in Gentofte, Denmark, and co-workers reviewed recent research linking lncRNAs and IBD. They discuss how lncRNAs’ roles in immunity and inflammation influence IBD development, describing how particular lncRNAs are related to IBD. Promising avenues for further research are highlighted, including the use of lncRNAs as biomarkers of IBD, which can be difficult to diagnose.
- Published
- 2018
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- View/download PDF
28. Beyond Making Stuff: Co-Designing Literacies and Collaborating for Critical Empathy
- Author
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Melissa McKinney-Lepp, Simranjeet Kaur, and Diane R. Collier
- Abstract
Children in a grade two/three classroom co-designed photographs of each other's important family objects to develop critical empathy and better understand their peers' home cultures. They engaged in visual critical literacy practices. The paper provides a narrative of what happened and a framework for creative collaborative pedagogy.
- Published
- 2024
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- View/download PDF
29. Long non-coding RNAs as novel players in β cell function and type 1 diabetes
- Author
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Aashiq H. Mirza, Simranjeet Kaur, and Flemming Pociot
- Subjects
Long non-coding RNAs ,Type 1 diabetes ,Enhancers ,Regulatory elements ,3D genome architecture ,Medicine ,Genetics ,QH426-470 - Abstract
Abstract Background Long non-coding RNAs (lncRNAs) are a sub-class within non-coding RNA repertoire that have emerged as crucial regulators of the gene expression in various pathophysiological conditions. lncRNAs display remarkable versatility and wield their functions through interactions with RNA, DNA, or proteins. Accumulating body of evidence based on multitude studies has highlighted the role of lncRNAs in many autoimmune and inflammatory diseases, including type 1 diabetes (T1D). Main body of abstract This review highlights emerging roles of lncRNAs in immune and islet β cell function as well as some of the challenges and opportunities in understanding the pathogenesis of T1D and its complications. Conclusion We accentuate that the lncRNAs within T1D-loci regions in consort with regulatory variants and enhancer clusters orchestrate the chromatin remodeling in β cells and thereby act as cis/trans-regulatory determinants of islet cell transcriptional programs.
- Published
- 2017
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- View/download PDF
30. Multiple plant regeneration from matricular substance released from explants of Citrus jambhiri
- Author
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POOJA MANCHANDA, ANU KALIA, GURUPKAR S SIDHU, H S RATTANPAL, KULJOT KAUR, and SIMRANJEET KAUR
- Subjects
Cotyledons ,Epicotyl ,FT-IR Spectroscopy ,LC-MS ,SEM ,Agriculture - Abstract
Comparative performance of epicotyl-, hypocotyl-, and cotyledonary (Cot) explants for direct organogenesis was evaluated with best response on BAP (3.5 mg/l) + NAA (0.5 mg/l) supplemented MS medium for Cot explants. This differential behaviour can be attributed to diversity and concentration of phytohormone(s), signal phenolics and other compounds. This study identifies the spatio-specific variabilities of these compounds leading to emergence of multiple shoots from explant’s injured regions indicated by formation of foamy-white exudate, ‘matrix’. Topographically, matrix appeared amorphous containing granulation. Further, FT-IR spectra indicated possible presence of woundinduced sugars and phytohormones. Likewise, LC-MS study revealed presence of diverse sugars, phytohormone (PH)/ PH-like and signal compounds. This study illustrates possible interactive roles played by spatial co-localization of these compounds at wounded cut ends of explants for multiple in vitro shoot organogenesis. This study put-forth a novel concept of localized occurrence of multiple primary and secondary metabolites at cut/wounded ends of citrus explants which led to emergence of multiple shoots. These results are promising and could serve the basis for further investigations on various other citrus species for diversity and quantity of various metabolites during in vitro cultivation.
- Published
- 2020
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- View/download PDF
31. Breast Milk-Derived Extracellular Vesicles Enriched in Exosomes From Mothers With Type 1 Diabetes Contain Aberrant Levels of microRNAs
- Author
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Aashiq H. Mirza, Simranjeet Kaur, Lotte B. Nielsen, Joachim Størling, Reza Yarani, Martin Roursgaard, Elisabeth R. Mathiesen, Peter Damm, Jens Svare, Henrik B. Mortensen, and Flemming Pociot
- Subjects
breast milk ,exosomes ,miRNAs ,Type 1 diabetes ,exomiRs ,Immunologic diseases. Allergy ,RC581-607 - Abstract
The breast milk plays a crucial role in shaping the initial intestinal microbiota and mucosal immunity of the infant. Interestingly, breastfeeding has proven to be protective against the early onset of immune-mediated diseases including type 1 diabetes. Studies have shown that exosomes from human breast milk are enriched in immune-modulating miRNAs suggesting that exosomal miRNAs (exomiRs) transferred to the infant could play a critical role in the development of the infant's immune system. We extracted exomiRs from breast milk of 52 lactating mothers (26 mothers with type 1 diabetes and 26 healthy mothers), to identify any differences in the exomiR content between the two groups. Small RNA-sequencing was performed to identify known and novel miRNAs in both groups. A total of 631 exomiRs were detected by small RNA sequencing including immune-related miRNAs such as hsa-let-7c, hsa-miR-21, hsa-miR-34a, hsa-miR-146b, and hsa-miR-200b. In addition, ~200 novel miRNAs were identified in both type 1 diabetes and control samples. Among the known miRNAs, nine exomiR's were found differentially expressed in mothers with type 1 diabetes compared to healthy mothers. The highly up-regulated miRNAs, hsa-miR-4497, and hsa-miR-3178, increased lipopolysaccharide-induced expression and secretion of tumor necrosis factor α (TNFα) in human monocytes. The up-regulated miRNA target genes were significantly enriched for longevity-regulating pathways and FoxO signaling. Our findings suggest a role of breast milk-derived exomiRs in modulating the infant's immune system.
- Published
- 2019
- Full Text
- View/download PDF
32. Effect of dentifrices on their remineralizing potential in artificial carious lesions: An in situ study
- Author
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Satyawan Gangaramji Damle, Aditi Bector, Dhanashree Damle, and Simranjeet Kaur
- Subjects
Dental caries ,dentifrices ,fluoride ,tooth remineralization ,Dentistry ,RK1-715 - Abstract
Background: The eventual sequel of dental caries is determined by the dynamic equilibrium between pathological factors which lead to demineralization and protective elements, which in turn leads to remineralization. Remineralization is the natural process for noncavitated demineralized lesions and relies on calcium and phosphate ions assisted by fluoride to rebuild a new surface on existing crystal remnants in subsurface lesions remaining after demineralization. Hence, the present study was designed to evaluate the efficacy of fluoride dentifrices in remineralizing artificial caries-like lesions in situ. Materials and Methods: A double-blind, randomized study with an initial washout period of 7 days was carried out for 3 weeks. Twenty volunteers were enrolled, who wore the intraoral cariogenicity test appliance having enamel slabs incorporated into them, for 3 weeks. 10 participants were instructed to use Group A dentifrice (fluoride) and the other 10 Group B dentifrice (nonfluoride) for brushing their teeth. The enamel slabs were analyzed by surface microhardness testing and scanning electron microscopy (SEM) at 3 intervals. Results: No significant differences was seen in the microhardness values recorded for Group A and Group B at baseline and after demineralization (P > 0.05); however Group B exhibited lesser microhardness compared to Group A, after intra-oral exposure (P < 0.05). In the SEM analysis, the Group A enamel surfaces had more regular and longer crystallites to those of the Group B. Conclusion: Fluoride dentifrices avert the decrease in enamel hardness and loss of minerals from the enamel surface to a large extent as compared to the nonfluoride dentifrices.
- Published
- 2016
- Full Text
- View/download PDF
33. Use of natural anterior maxillary teeth in immediate removable partial denture: An old technique revisited
- Author
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Varun Baslas, Simranjeet Kaur, Rohit Yadav, Himanshi Aggarwal, and Mohammad Ehtisham
- Subjects
extracted teeth ,immediate denture ,natural teeth ,Dentistry ,RK1-715 - Abstract
Maxillary anterior teeth play an important role in esthetics, speech, smile, and self-esteem of an individual. Although a clinician can restore missing teeth with artificial teeth, the importance of natural teeth in patient's overall personality cannot be ignored. The present article elucidates a technique for fabrication of immediate removable partial denture prosthesis using natural teeth to enhance esthetics and confidence of the patient.
- Published
- 2016
- Full Text
- View/download PDF
34. MicroRNAs and histone deacetylase inhibition-mediated protection against inflammatory β-cell damage.
- Author
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Anna Lindeløv Vestergaard, Claus Heiner Bang-Berthelsen, Tina Fløyel, Jonathan Lucien Stahl, Lisa Christen, Farzaneh Taheri Sotudeh, Peter de Hemmer Horskjær, Klaus Stensgaard Frederiksen, Frida Greek Kofod, Christine Bruun, Lukas Adrian Berchtold, Joachim Størling, Romano Regazzi, Simranjeet Kaur, Flemming Pociot, and Thomas Mandrup-Poulsen
- Subjects
Medicine ,Science - Abstract
Inflammatory β-cell failure contributes to type 1 and type 2 diabetes pathogenesis. Pro-inflammatory cytokines cause β-cell dysfunction and apoptosis, and lysine deacetylase inhibitors (KDACi) prevent β-cell failure in vitro and in vivo, in part by reducing NF-κB transcriptional activity. We investigated the hypothesis that the protective effect of KDACi involves transcriptional regulation of microRNAs (miRs), potential new targets in diabetes treatment. Insulin-producing INS1 cells were cultured with or without the broad-spectrum KDACi Givinostat, prior to exposure to the pro-inflammatory cytokines IL-1β and IFN-γ for 6 h or 24 h, and miR expression was profiled with miR array. Thirteen miRs (miR-7a-2-3p, miR-29c-3p, miR-96-5p, miR-101a-3p, miR-140-5p, miR-146a-5p, miR-146b-5p, miR-340-5p, miR-384-5p, miR-455-5p, miR-466b-2-3p, miR-652-5p, and miR-3584-5p) were regulated by both cytokines and Givinostat, and nine were examined by qRT-PCR. miR-146a-5p was strongly regulated by cytokines and KDACi and was analyzed further. miR-146a-5p expression was induced by cytokines in rat and human islets. Cytokine-induced miR-146a-5p expression was specific for INS1 and β-TC3 cells, whereas α-TC1 cells exhibited a higher basal expression. Transfection of INS1 cells with miR-146a-5p reduced cytokine signaling, including the activity of NF-κB and iNOS promoters, as well as NO production and protein levels of iNOS and its own direct targets TNF receptor associated factor 6 (TRAF6) and interleukin-1 receptor-associated kinase 1 (IRAK1). miR-146a-5p was elevated in the pancreas of diabetes-prone BB-DP rats at diabetes onset, suggesting that miR-146a-5p could play a role in type 1 diabetes development. The miR array of cytokine-exposed INS1 cells rescued by KDACi revealed several other miRs potentially involved in cytokine-induced β-cell apoptosis, demonstrating the strength of this approach.
- Published
- 2018
- Full Text
- View/download PDF
35. A revised technique for fabrication of hollow mandibular denture: A solution to severely resorbed residual ridge
- Author
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Varun Baslas, Simranjeet Kaur, Kamleshwar Singh, Himanshi Aggarwal, and Pradeep Kumar
- Subjects
Hollow denture ,light weight denture ,resorbed ridges ,Dentistry ,RK1-715 - Abstract
Purpose: Prosthodontic rehabilitation of elderly patients with severely resorbed ridges is difficult due to compromised ridge height, increased inter-arch distance and altered insertion of associated jaw muscles. Planning dentures in such cases often require dentures that are lightweight to reduce the risk of further ridge resorption, which could otherwise complicate the situation. The purpose of the present technique is to fabricate a light weight lower denture by a revision of previously described technique in the literature. Materials and Methods: This article elucidates a simple technique for the fabrication of lightweight denture (hollow denture) in elderly patients with severely resorbed mandibular ridge. The minimum thickness of denture base acrylic resin for structural durability is ensured by a wax shim of 2 mm. The adequate hollow space indenture for optimal weight reduction is created by condensation silicone impression material. Conclusion: Condensation silicone putty material can be successfully used as a spacer for hollow dentures to combat severe ridge resorption.
- Published
- 2015
- Full Text
- View/download PDF
36. Basic principles of rehabilitation for lost eye: A dentist′s perspectives
- Author
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Varun Baslas, Simranjeet Kaur, Rohit Yadav, Himanshi Aggarwal, Sunit Kumar Jurel, and Pradeep Kumar
- Subjects
Custom-fit prosthesis ,ocular prosthesis ,shell prosthesis ,Medicine - Abstract
Various maxillofacial prostheses are made from materials used in dentistry. The treatment of the patient who loses one or both eyes is a challenging task for the clinician. A multidisciplinary approach is required to fulfill the needs and expectations of an anophthalmic patient. Dentists are now playing a major role in this regard as they are more familiar with the materials used for artificial eyes. Ocular prosthesis is an artifi cial replacement of the eye. The article describes the overall management and treatment of an anophthalmic patient, followed by a procedure for an easy fabrication of a custom-fi tocular prosthesis.
- Published
- 2015
- Full Text
- View/download PDF
37. A technique for using short term soft liners as complete dentures final impression material
- Author
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Varun Baslas, Saumyendra V. Singh, Himanshi Aggarwal, Simranjeet Kaur, Kamleshwar Singh, and Kaushal K. Agarwal
- Subjects
Tissue conditioner ,Soft liner ,Impression material ,Resorbed ridges ,Dentistry ,RK1-715 - Abstract
Tissue conditioners can be used to condition abused tissues, record functional impressions, make temporary relining for surgical splints and obturators, and for other clinical applications, mainly because of their specific viscoelasticity. Their function in complete denture fabrication is debatable but their use as a functional impression material has been proved. The present article describes a technique for using tissue conditioners as functional impression materials. Correct method of usage, manipulation, specific properties as impression materials and precautions in different situations for obtaining accurate impressions has been highlightened.
- Published
- 2014
- Full Text
- View/download PDF
38. Cell Type-Selective Expression of Circular RNAs in Human Pancreatic Islets
- Author
-
Simranjeet Kaur, Aashiq H. Mirza, and Flemming Pociot
- Subjects
circular RNAs ,circRNA ,human islets ,RNA-seq ,type 1 diabetes ,β-cell ,Genetics ,QH426-470 - Abstract
Understanding distinct cell-type specific gene expression in human pancreatic islets is important for developing islet regeneration strategies and therapies to improve β-cell function in type 1 diabetes (T1D). While numerous transcriptome-wide studies on human islet cell-types have focused on protein-coding genes, the non-coding repertoire, such as long non-coding RNA, including circular RNAs, remains mostly unexplored. Here, we explored transcriptional landscape of human α-, β-, and exocrine cells from published total RNA sequencing (RNA-seq) datasets to identify circular RNAs (circRNAs). Our analysis revealed that circRNAs are highly abundant in both α- and β-cells. We identified 10,830 high-confidence circRNAs expressed in human α-, β-, and exocrine cells. The most highly expressed candidates were MAN1A2, RMST, and HIPK3 across the three cell-types. Alternate circular isoforms were observed for circRNAs in the three cell-types, indicative of potential distinct functions. Highly selective α- and β-cell circRNAs were identified, which is suggestive of their potential role in regulating β-cell function.
- Published
- 2018
- Full Text
- View/download PDF
39. Influence of Disease Duration on Circulating Levels of miRNAs in Children and Adolescents with New Onset Type 1 Diabetes
- Author
-
Nasim Samandari, Aashiq H. Mirza, Simranjeet Kaur, Philip Hougaard, Lotte B. Nielsen, Siri Fredheim, Henrik B. Mortensen, and Flemming Pociot
- Subjects
children ,immunology ,miRNA ,partial remission phase ,type 1 diabetes ,Genetics ,QH426-470 - Abstract
Circulating microRNAs (miRNAs) have been implicated in several pathologies including type 1 diabetes. In the present study, we aimed to identify circulating miRNAs affected by disease duration in children with recent onset type 1 diabetes. Forty children and adolescents from the Danish Remission Phase Cohort were followed with blood samples drawn at 1, 3, 6, 12, and 60 months after diagnosis. Pancreatic autoantibodies were measured at each visit. Cytokines were measured only the first year. miRNA expression profiling was performed by RT-qPCR. The effect of disease duration was analyzed by mixed models for repeated measurements adjusted for sex and age. Eight miRNAs (hsa-miR-10b-5p, hsa-miR-17-5p, hsa-miR-30e-5p, hsa-miR-93-5p, hsa-miR-99a-5p, hsa-miR-125b-5p, hsa-miR-423-3p, and hsa-miR-497-5p) were found to significantly change in expression (adjusted p-value < 0.05) with disease progression. Three pancreatic autoantibodies, ICA, IA-2A, and GAD65A, and four cytokines, IL-4, IL-10, IL-21, and IL-22, were associated with the miRNAs at different time points. Pathway analysis revealed associations with various immune-mediated signaling pathways. Eight miRNAs that were involved in immunological pathways changed expression levels during the first five years after diagnosis and were associated with variations in cytokine and pancreatic antibodies, suggesting a possible effect on the immunological processes in the early phase of the disease.
- Published
- 2018
- Full Text
- View/download PDF
40. Genetic Risk Score Modelling for Disease Progression in New-Onset Type 1 Diabetes Patients: Increased Genetic Load of Islet-Expressed and Cytokine-Regulated Candidate Genes Predicts Poorer Glycemic Control
- Author
-
Caroline A. Brorsson, Lotte B. Nielsen, Marie Louise Andersen, Simranjeet Kaur, Regine Bergholdt, Lars Hansen, Henrik B. Mortensen, Flemming Pociot, Joachim Størling, and Hvidoere Study Group on Childhood Diabetes
- Subjects
Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
Genome-wide association studies (GWAS) have identified over 40 type 1 diabetes risk loci. The clinical impact of these loci on β-cell function during disease progression is unknown. We aimed at testing whether a genetic risk score could predict glycemic control and residual β-cell function in type 1 diabetes (T1D). As gene expression may represent an intermediate phenotype between genetic variation and disease, we hypothesized that genes within T1D loci which are expressed in islets and transcriptionally regulated by proinflammatory cytokines would be the best predictors of disease progression. Two-thirds of 46 GWAS candidate genes examined were expressed in human islets, and 11 of these significantly changed expression levels following exposure to proinflammatory cytokines (IL-1β + IFNγ + TNFα) for 48 h. Using the GWAS single nucleotide polymorphisms (SNPs) from each locus, we constructed a genetic risk score based on the cumulative number of risk alleles carried in children with newly diagnosed T1D. With each additional risk allele carried, HbA1c levels increased significantly within first year after diagnosis. Network and gene ontology (GO) analyses revealed that several of the 11 candidate genes have overlapping biological functions and interact in a common network. Our results may help predict disease progression in newly diagnosed children with T1D which can be exploited for optimizing treatment.
- Published
- 2016
- Full Text
- View/download PDF
41. The Relationship of Transformational Leadership and Perceived Organisational Support with Organizational Commitment: The mediating role of Employee Engagement /Relacao da Lideranca Transformacional e do Suporte Organizacional Percebido com o Comprometimento Organizacional: O Papel Mediador do Engajamento dos Funcionarios
- Author
-
Kumar, Saurabh and Bagga, Simranjeet Kaur
- Published
- 2024
- Full Text
- View/download PDF
42. Effects of GWAS-associated genetic variants on lncRNAs within IBD and T1D candidate loci.
- Author
-
Aashiq H Mirza, Simranjeet Kaur, Caroline A Brorsson, and Flemming Pociot
- Subjects
Medicine ,Science - Abstract
Long non-coding RNAs are a new class of non-coding RNAs that are at the crosshairs in many human diseases such as cancers, cardiovascular disorders, inflammatory and autoimmune disease like Inflammatory Bowel Disease (IBD) and Type 1 Diabetes (T1D). Nearly 90% of the phenotype-associated single-nucleotide polymorphisms (SNPs) identified by genome-wide association studies (GWAS) lie outside of the protein coding regions, and map to the non-coding intervals. However, the relationship between phenotype-associated loci and the non-coding regions including the long non-coding RNAs (lncRNAs) is poorly understood. Here, we systemically identified all annotated IBD and T1D loci-associated lncRNAs, and mapped nominally significant GWAS/ImmunoChip SNPs for IBD and T1D within these lncRNAs. Additionally, we identified tissue-specific cis-eQTLs, and strong linkage disequilibrium (LD) signals associated with these SNPs. We explored sequence and structure based attributes of these lncRNAs, and also predicted the structural effects of mapped SNPs within them. We also identified lncRNAs in IBD and T1D that are under recent positive selection. Our analysis identified putative lncRNA secondary structure-disruptive SNPs within and in close proximity (+/-5 kb flanking regions) of IBD and T1D loci-associated candidate genes, suggesting that these RNA conformation-altering polymorphisms might be associated with diseased-phenotype. Disruption of lncRNA secondary structure due to presence of GWAS SNPs provides valuable information that could be potentially useful for future structure-function studies on lncRNAs.
- Published
- 2014
- Full Text
- View/download PDF
43. Snoring: An Annoyance or a Serious Health Problem (Obstructive Sleep Apnea)?
- Author
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Simranjeet Kaur, Varun Baslas, Himanshi Aggarwal, Pradeep Kumar, and Pooran Chand
- Subjects
Public aspects of medicine ,RA1-1270 - Published
- 2015
- Full Text
- View/download PDF
44. Everyday Engagement with Mobile Phones in an Urban Slum in Delhi
- Author
-
Simranjeet Kaur and Sunita Singh
- Abstract
This ethnographic case study presents findings of an 18-month research study focusing on the ways in which families residing in an urban slum were using mobile phones and how this use supported literacy practices. Data collection included participant observations and interviews with 42 participants including parents, children and community members. Results of the data analysis indicated that in this urban slum, most participants owned a mobile phone which provided multiple entry points to learning. The phones ushered in new ways of brokering knowledge where children acted as 'experts' and enabled parents to perform everyday tasks while parents mediated as cultural brokers and fostered religious and cultural practices and knowledge of the mother tongue. The implications of the study point to the evolving nature of literacy practices, the versatility of the device, the uneven landscape of smartphone use and the limitations posed by the schooling contexts.
- Published
- 2023
- Full Text
- View/download PDF
45. Oral appliances: A successful treatment modality for obstructive sleep apnea category
- Author
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Varun Baslas, Simranjeet Kaur, Pradeep Kumar, Pooran Chand, and Himanshi Aggarwal
- Subjects
Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Published
- 2014
- Full Text
- View/download PDF
46. Causal Categorization of Mental Health Posts using Transformers.
- Author
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Simranjeet Kaur, Ritika Bhardwaj, Aastha Jain, Muskan Garg, and Chandni Saxena
- Published
- 2022
- Full Text
- View/download PDF
47. Real Time Object Detection.
- Author
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Simranjeet Kaur, Anup Lal Yadav, and Abhishek Joshi
- Published
- 2022
- Full Text
- View/download PDF
48. Identification and Analysis of Threat Vector for Security Evaluation of LAN
- Author
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Rehan, Simranjeet Kaur, Saraswat, Rekha, Kacprzyk, Janusz, Series Editor, Pal, Nikhil R., Advisory Editor, Bello Perez, Rafael, Advisory Editor, Corchado, Emilio S., Advisory Editor, Hagras, Hani, Advisory Editor, Kóczy, László T., Advisory Editor, Kreinovich, Vladik, Advisory Editor, Lin, Chin-Teng, Advisory Editor, Lu, Jie, Advisory Editor, Melin, Patricia, Advisory Editor, Nedjah, Nadia, Advisory Editor, Nguyen, Ngoc Thanh, Advisory Editor, Wang, Jun, Advisory Editor, Noor, Arti, editor, Sen, Abhijit, editor, and Trivedi, Gaurav, editor
- Published
- 2022
- Full Text
- View/download PDF
49. India: Need of third generation human rights
- Author
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Agrawal, Shikha and Sandhar, Simranjeet Kaur
- Published
- 2022
- Full Text
- View/download PDF
50. Causal Categorization of Mental Health Posts using Transformers.
- Author
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Simranjeet Kaur, Ritika Bhardwaj, Aastha Jain, Muskan Garg, and Chandni Saxena
- Published
- 2023
- Full Text
- View/download PDF
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