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1. Preliminary results of EUROPONDS: early researchers shedding light on overlooked water bodies

Author

Fehlinger, L, Rimcheska, B, Mondav, R, Nash, L, Drohan, E, Misteli, B, Chaguaceda, F, Cunillera-Montcusi, D, Juvigny-Khenafou, N, Morant, D, Fahy, JC, Martelo, J, Zamora Marín, JM, Stamenković, O, Chonova, T, Balibrea Escobar, A, Bonacina, L, Bozóki, T, Camacho-Santamans, A, Camacho Santamans, BA, Calderó Pascual, M, Dąbrowski, D, Dinu, V, Englisch, C, Fekete, J, Fenoy, M, Freixinos Campillo, Z, Fyttis, G, García-Girón, J, Gerber, R, Guerrero Brotons, M, Haba, A, Halabowski, D, Henriques, J, Jakobsson, E, Köksal, Z, Kolář, V, Kuczyńska, K, Labat, F, Llorente, A, Maniezhilan, E, Mathieu-Resuge, M, Marle, P, Moza, MA, Moras, S, Münzner, K, Nava, V, Nita, D, Nunes, S, Olenici, A, Esosa Osakpolor, S, Papatheodoulou, A, Pereira, N, Parmar, TP, Rontani, PM, Rubio-Ríos, J, Sarkezi, M, Sánchez Dávila, J, Scotti, A, Sivess, L, Smiljanić, P, Soto García, P, Souto Souto, M, Sowa, A, Suarez, E, Timoner, P, Tirozzi, P, Tomás Martín, M, Vallefuoco, F, Vanek, M, Vebrová, L, Dalla Vecchia, A, Zawadzka, M, Fehlinger, L, Rimcheska, B, Mondav, R, Nash, L, Drohan, E, Misteli, B, Chaguaceda, F, Cunillera-Montcusi, D, Juvigny-Khenafou, N, Morant, D, Fahy, J, Martelo, J, Zamora Marín, J, Stamenković, O, Chonova, T, Balibrea Escobar, A, Bonacina, L, Bozóki, T, Camacho-Santamans, A, Camacho Santamans, B, Calderó Pascual, M, Dąbrowski, D, Dinu, V, Englisch, C, Fekete, J, Fenoy, M, Freixinos Campillo, Z, Fyttis, G, García-Girón, J, Gerber, R, Guerrero Brotons, M, Haba, A, Halabowski, D, Henriques, J, Jakobsson, E, Köksal, Z, Kolář, V, Kuczyńska, K, Labat, F, Llorente, A, Maniezhilan, E, Mathieu-Resuge, M, Marle, P, Moza, M, Moras, S, Münzner, K, Nava, V, Nita, D, Nunes, S, Olenici, A, Esosa Osakpolor, S, Papatheodoulou, A, Pereira, N, Parmar, T, Rontani, P, Rubio-Ríos, J, Sarkezi, M, Sánchez Dávila, J, Scotti, A, Sivess, L, Smiljanić, P, Soto García, P, Souto Souto, M, Sowa, A, Suarez, E, Timoner, P, Tirozzi, P, Tomás Martín, M, Vallefuoco, F, Vanek, M, Vebrová, L, Dalla Vecchia, A, and Zawadzka, M

Subjects
dietary subsidie, emerging insect, pond, fatty acid, small water bodies
Abstract

Whilst being generally small and shallow lentic water bodies, ponds provide valuable habitats for a multitude of groups and contribute to habitat connectivity. Semi-aquatic insects emerging from such ponds act as one of the most important vectors of dietary energy to the adjacent terrestrial environment. By providing essential fatty acids, emerging insects constitute an important nutritional food resource for terrestrial (e.g. spiders, lizards, ants) and aerial (e.g. bats, birds) consumers. Broad-scale studies are needed to explore differences in dietary exports encompassing diverse pond types and different landscapes or regions, with the final aim of drawing general patterns. Herein we present the first results of "EUROPONDS". In this ongoing project we quantify the seasonal and spatial variation in insect emergence. In a total of 55 ponds distributed across Europe we installed emergence traps for one week per season over a full year. This broad scale set-up allows us to quantify differences in biomass export between different geographical regions, between rural and urban systems as well as between natural and artificial ponds. The project brings together the knowledge of 80 early-career limnologists from all over Europe and therefore not only provides important insight in the aquatic-terrestrial linkages of ponds, but also provides an important exchange among the future generation of European limnologists.

Published
2021

2. Ecological assessment of a renaturalised pond in the quarries of Alpedrete (Spain)

Author

Fehlinger, L, Rimcheska, B, Tomás-Martín, M, Soto-García, S, Mondav, R, Nash, L, Drohan, E, Misteli, B, Chaguaceda, F, Cunillera-Montcusi, D, Juvigny- Khenafou, D, Morant, D, Fahy, JC, Martelo, J, Zamora Marín, JM, Stamenković, O, Chonova, T, Balibrea Escobar, A, Bonacina, L, Bozóki, T, Camacho Santamans, A, Calderó Pascual, A, Dąbrowski, D, Dinu, D, Englisch, C, Fekete, J, Fenoy, E, Freixinos Campillo, Z, Fyttis, G, García-Girón, J, Gerber, R, Guerrero Brotons, M, Haba, A, Halabowski, D, Henriques, J, Jakobsson, E, Köksal, Z, Kolář, K, Mathieu-Resuge, M, Marle, P, Moza, MI, Moras, S, Münzner, S, Nava, V, Nita, D, Nunes, S, Olenici, A, Esosa Osakpolor, S, Papatheodoulou, A, Pereira, N, Parmar, TP, Rontani, PM, Rubio-Ríos, J, Sarkezi, M, Scotti, A, Sivess, L, Smiljanić, P, Souto Souto, M, Sowa, A, Suarez, A, Timoner, P, Tirozzi, P, Vallefuoco, F, Vanek, M, Vebrová, L, Dalla Vecchia, L, Zawadzka, M, Kuczyńska, K, Labat, F, Llorente, A, Maniezhilan, E, Fehlinger, L, Rimcheska, B, Tomás-Martín, M, Soto-García, S, Mondav, R, Nash, L, Drohan, E, Misteli, B, Chaguaceda, F, Cunillera-Montcusi, D, Juvigny- Khenafou, D, Morant, D, Fahy, J, Martelo, J, Zamora Marín, J, Stamenković, O, Chonova, T, Balibrea Escobar, A, Bonacina, L, Bozóki, T, Camacho Santamans, A, Calderó Pascual, A, Dąbrowski, D, Dinu, D, Englisch, C, Fekete, J, Fenoy, E, Freixinos Campillo, Z, Fyttis, G, García-Girón, J, Gerber, R, Guerrero Brotons, M, Haba, A, Halabowski, D, Henriques, J, Jakobsson, E, Köksal, Z, Kolář, K, Mathieu-Resuge, M, Marle, P, Moza, M, Moras, S, Münzner, S, Nava, V, Nita, D, Nunes, S, Olenici, A, Esosa Osakpolor, S, Papatheodoulou, A, Pereira, N, Parmar, T, Rontani, P, Rubio-Ríos, J, Sarkezi, M, Scotti, A, Sivess, L, Smiljanić, P, Souto Souto, M, Sowa, A, Suarez, A, Timoner, P, Tirozzi, P, Vallefuoco, F, Vanek, M, Vebrová, L, Dalla Vecchia, L, Zawadzka, M, Kuczyńska, K, Labat, F, Llorente, A, and Maniezhilan, E

Subjects
macrophyte, pond, macrobentho, freshwater, macroinvertebrate assemblages
Abstract

Invertebrates have recently been recognised under a global decline, a situation that seems to be accentuated in continental waterbodies. In the EUROPONDS project we deepened in the contribution of aquatic invertebrates to terrestrial ecosystems, representing countries all over Europe. Our study was encompassed in a restored quarry in Alpedrete, Madrid, Spain, a landscape destined for livestock activities. We evaluated the invertebrate assemblages of a small permanent pond after restoration (physicochemical variables, macroinvertebrates assemblages and macrophytes species) and its contribution to the landscape by the emerging insects. To do that, we have carried out seasonal samplings starting in autumn 2020 and finishing by summer 2021. We detected a highly aquatic biodiversity in our study pond, showing oversaturation of dissolved oxygen concentration and a rich and dense cover of macrophytes. A diverse assemblage of aquatic macroinvertebrates included odonates, heteropterans, coleopterans, culicids, chironomids and ephemeropterans. We located two traps for emergent insects during one week each season, and we captured flying and adult individuals of some of these macroinvertebrates (even 60 chironomids in winter), revealing the importance of this pond for the adjacent landscape. We concluded that our shallow permanent pond shows a high degree of naturalisation due to the huge diversity of fauna and flora recorded. We consider of concern that the cattle’s faeces in the surroundings of the pond could reduce the water quality as detected an increase in nitrate concentration (0,16 mg/L in winter). Therefore, we encourage regional authorities to include this pond in the regional program for wetland conservation.

Published
2021

3. Overseen ecosystem services of ponds and their insects – their role for supporting terrestrial consumers and biodiversity 'EUROPONDS'

Author

Rimcheska, B, Fehlinger, L, Misteli, B, Chaguaceda, F, Cunillera-Montcusi, D, Juvigny-Khenafou, N, Morant, D, Chonova, T, Balibrea Escobar, A, Bonacina, L, Bozóki, T, Camacho-Santamans, A, Calderó Pascual, M, Dąbrowski, D, Dinu, V, Drohan, E, Englisch, C, Fahy, J, Fekete, J, Fenoy, E, Freixinos Campillo, Z, Fyttis, G, Garcia-Giron, J, Gerber, R, Guerrero Brotons, M, Haba, A, Halabowski, D, Henriques, J, Jakobsson, E, Köksal, Z, Kolář, V, Kuczyńska K, Labat F, de Lima-Fernandes, E, Llorente, A, Maniezhilan, E, Mathieu-Resuge, M, Marle, P, Martelo J, Moza MI, Mondav, R, Moras, S, Münzner, K, Nash, L, Nava, V, Nita, D, Nunes, S, Olenici, A, Esosa Osakpolor, S, Papatheodoulou, A, Pereira, N, Parmar, T P, Rontani P M, Rubio-Ríos J, Sarkezi, M, Sánchez Dávila, J, Scotti, A, Sivess, L, Smiljanić, P, Soto García, P, Souto Souto, M, Sowa, A, Stamenković, O, Suarez E, Timoner, P, Tirozzi, P, Tomás Martín, M, Vallefuoco, F, Vanek, M, Vebrová, L, Dalla Vecchia, A, Zamora Marín, J M, Zawadzka, M, Rimcheska, B, Fehlinger, L, Misteli, B, Chaguaceda, F, Cunillera-Montcusi, D, Juvigny-Khenafou, N, Morant, D, Chonova, T, Balibrea Escobar, A, Bonacina, L, Bozóki, T, Camacho-Santamans, A, Calderó Pascual, M, Dąbrowski, D, Dinu, V, Drohan, E, Englisch, C, Fahy, J, Fekete, J, Fenoy, E, Freixinos Campillo, Z, Fyttis, G, Garcia-Giron, J, Gerber, R, Guerrero Brotons, M, Haba, A, Halabowski, D, Henriques, J, Jakobsson, E, Köksal, Z, Kolář, V, Kuczyńska, K, Labat, F, de Lima-Fernandes, E, Llorente, A, Maniezhilan, E, Mathieu-Resuge, M, Marle, P, Martelo, J, Moza, M, Mondav, R, Moras, S, Münzner, K, Nash, L, Nava, V, Nita, D, Nunes, S, Olenici, A, Esosa Osakpolor, S, Papatheodoulou, A, Pereira, N, Parmar, T, Rontani, P, Rubio-Ríos, J, Sarkezi, M, Sánchez Dávila, J, Scotti, A, Sivess, L, Smiljanić, P, Soto García, P, Souto Souto, M, Sowa, A, Stamenković, O, Suarez, E, Timoner, P, Tirozzi, P, Tomás Martín, M, Vallefuoco, F, Vanek, M, Vebrová, L, Dalla Vecchia, A, Zamora Marín, J, and Zawadzka, M

Subjects
insect diversity, dietary energy, fatty acids, Europe
Abstract

Globally there’s an astounding and often underestimated number of ponds (small stagnant water bodies). Ponds, whilst directly providing habitats for a multitude of animals and plants, also contribute to habitat connectivity by enabling organisms to cross the landscape, acting as “blue stepping stones”. The diverse community of insects emerging from such ponds acts as a vector of dietary energy to the surrounding terrestrial environment. By providing highly unsaturated fatty acids, emerging insects constitute a high nutritional food resource for terrestrial (e.g. spiders, lizards) and avian (e.g. bats, birds) consumers. One important dietary resource these insects export is essential fatty acids. These are introduced initially into the local food web and then on into the main terrestrial cycle. However, knowledge about the exact ecological role of ponds, their contribution to beta- and gamma-biodiversity, and dietary energy transfer is limited. Herein, we present preliminary results for the first seasonal sampling (Autumn 2020) of our ongoing “EUROPONDS” project. EUROPONDS aims to fill this gap of knowledge on ponds by analyzing 55 ponds distributed across Europe from Sweden in the north to remote Mediterranean islands in the south, from rural areas to large cities, and including both artificial and natural ponds. EUROPONDS brings together around 80 European early-career limnologists and covers autumn, winter, spring, and summer sampling campaigns through 2020/21. Preliminary results from autumn 2020 indicate differences in emerging insect biomass, trophic status of ponds, and between artificial and natural ponds.

Published
2021

4. 3rd European FreshProject “EUROPONDS”

Author

Lopez Martinez, JL, de las Nieves, IF, Cerón García, MC, Mañas Mañas, JF, Moreno Balcázar, JJ, Fehlinger, L, Rimcheska, B, Rubio-Ríos, J, Fenoy, E, Mathieu-Resuge, M, Sarkezi1, M, Englisch, C, Cunillera-Montcusi, D, Parmar, T, Moza, M, Olenici, A, Nita, D, Dinu, V, Juvigny-Khenafou, N, Osakpolor, S, de Lima-Fernandes, E, Camacho-Santamans, A, Morant, D, Santamans, A, Scotti, A, Vanek, M, Dalla Vecchia, A, Rontani, P, Balibrea, A, Souto, M, Nava, V, Tirozzi, P, Marti-Tomás, Soto, P, Sánchez, J, Garcia-Giron, J, de Prado Jimeno, R, Fahy, J, Chonova, T, Marle, P, Suarez, E, Timoner, P, Bonacina, L, Kolář, V, Vebrová, L, Martelo, J, Henriques, J, Nunes, N, Pereira, N, Sowa, A, Halabowski, D, Prgić, G, Matković, M, Llorente, A, Haba, A, Kuczyńska, K, Köksal, Z, Münzner, K, Moras, S, Chaguaceda, F, Jakobsson, E, Mondav, R, Maniezhilan, E, Nash, L, Sivess, L, Drohan, E, Caldero-Pascual, M, Zawadzka, M, Dąbrowski, D, Fyttis, G, Papatheodoulou, A, Vallefuoco, F, Misteli, B, Gerber, R, Labat, F, Zamora, J, Guerrero, M, Freixinos, Z, Stamenković, O, Smiljanić, P, Bozóki, T, Fekete, J, Parmar, TP, Moza, MI, Osakpolor, SE, Santamans, AC, Rontani, PM, Zamora, JM, Lopez Martinez, JL, de las Nieves, IF, Cerón García, MC, Mañas Mañas, JF, Moreno Balcázar, JJ, Fehlinger, L, Rimcheska, B, Rubio-Ríos, J, Fenoy, E, Mathieu-Resuge, M, Sarkezi1, M, Englisch, C, Cunillera-Montcusi, D, Parmar, T, Moza, M, Olenici, A, Nita, D, Dinu, V, Juvigny-Khenafou, N, Osakpolor, S, de Lima-Fernandes, E, Camacho-Santamans, A, Morant, D, Santamans, A, Scotti, A, Vanek, M, Dalla Vecchia, A, Rontani, P, Balibrea, A, Souto, M, Nava, V, Tirozzi, P, Marti-Tomás, Soto, P, Sánchez, J, Garcia-Giron, J, de Prado Jimeno, R, Fahy, J, Chonova, T, Marle, P, Suarez, E, Timoner, P, Bonacina, L, Kolář, V, Vebrová, L, Martelo, J, Henriques, J, Nunes, N, Pereira, N, Sowa, A, Halabowski, D, Prgić, G, Matković, M, Llorente, A, Haba, A, Kuczyńska, K, Köksal, Z, Münzner, K, Moras, S, Chaguaceda, F, Jakobsson, E, Mondav, R, Maniezhilan, E, Nash, L, Sivess, L, Drohan, E, Caldero-Pascual, M, Zawadzka, M, Dąbrowski, D, Fyttis, G, Papatheodoulou, A, Vallefuoco, F, Misteli, B, Gerber, R, Labat, F, Zamora, J, Guerrero, M, Freixinos, Z, Stamenković, O, Smiljanić, P, Bozóki, T, Fekete, J, Parmar, TP, Moza, MI, Osakpolor, SE, Santamans, AC, Rontani, PM, and Zamora, JM

Abstract

There are thousands of ponds across Europe, from Lapland to Mediterranean islands and from remote areas to densely populated cities. Most of them provide habitats for animals like aquatic insects and others, even rare species. Ponds also contribute to habitat connectivity and enable organisms to cross the landscape in their function as “blue stepping stones”. Insects emerging from such ponds can be rich in both biodiversity and dietary energy. They provide food and essential fatty acids for terrestrial and avian consumers (bats, birds, spiders, lizards) and thus, important ecosystem services. However, the knowledge about the ecological role of emerging insects from ponds, and their contribution to biodiversity and dietary energy transfer to consumers of adjacent ecosystems is limited. With this project, we aim to fill this gap of knowledge answering some unresolved questions: how does the trophic status of ponds affect the biodiversity and energy content of emerging insects? How different are ponds from various regions, e.g., cities vs. remote areas, in supporting insect biodiversity? Such questions are to be answered through a highly collaborative network of around 80 young freshwater scientists within EUROPONDS.

Published
2021

5. The genome sequence of the cephid sawfly, Cephus spinipes (Panzer, 1800).

Author

Broad GR, Sivess L, Holt S, Fletcher C, and Januszczak I

Abstract

We present a genome assembly from an individual male cephid sawfly, Cephus spinipes (Arthropoda; Insecta; Hymenoptera; Cephidae). The genome sequence has a total length of 238.60 megabases. Most of the assembly is scaffolded into 10 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 21.43 kilobases in length., Competing Interests: No competing interests were disclosed., (Copyright: © 2024 Broad GR et al.)

Published
2024
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6. A DNA barcoding framework for taxonomic verification in the Darwin Tree of Life Project.

Author

Twyford AD, Beasley J, Barnes I, Allen H, Azzopardi F, Bell D, Blaxter ML, Broad G, Campos-Dominguez L, Choonea D, Crowley L, Cuber P, Cunliffe M, Dombrowski A, Douglas B, Forrest LL, Gaya E, Greeves C, Griffin C, Harley J, Hart ML, Holland PWH, Hollingsworth PM, Januszczak I, Jones A, Kersey P, Kilias E, Lawniczak MKN, Lewis OT, Mian S, Minotto A, Misra R, Mulhair PO, Pereira da Conceicoa L, Price BW, Salatino S, Shaw F, Sivell O, Sivess L, Uhl R, and Woof K

Abstract

Biodiversity genomics research requires reliable organismal identification, which can be difficult based on morphology alone. DNA-based identification using DNA barcoding can provide confirmation of species identity and resolve taxonomic issues but is rarely used in studies generating reference genomes. Here, we describe the development and implementation of DNA barcoding for the Darwin Tree of Life Project (DToL), which aims to sequence and assemble high quality reference genomes for all eukaryotic species in Britain and Ireland. We present a standardised framework for DNA barcode sequencing and data interpretation that is then adapted for diverse organismal groups. DNA barcoding data from over 12,000 DToL specimens has identified up to 20% of samples requiring additional verification, with 2% of seed plants and 3.5% of animal specimens subsequently having their names changed. We also make recommendations for future developments using new sequencing approaches and streamlined bioinformatic approaches., Competing Interests: No competing interests were disclosed., (Copyright: © 2024 Twyford AD et al.)

Published
2024
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7. The genome sequence of the Rivulet moth, Perizoma affinitatum (Stephens, 1831).

Author

Broad GR, Sivess L, Fletcher C, Januszczak I, Holt S, and Phillips D

Abstract

We present a genome assembly from an individual male Perizoma affinitatum (the Rivulet moth; Arthropoda; Insecta; Lepidoptera; Geometridae). The genome sequence is 357.7 megabases in span. Most of the assembly is scaffolded into 25 chromosomal pseudomolecules, including the Z sex chromosome. The mitochondrial genome has also been assembled and is 15.9 kilobases in length., Competing Interests: No competing interests were disclosed., (Copyright: © 2024 Broad GR et al.)

Published
2024
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8. A sampling strategy for genome sequencing the British terrestrial arthropod fauna.

Author

Crowley L, Allen H, Barnes I, Boyes D, Broad GR, Fletcher C, Holland PWH, Januszczak I, Lawniczak M, Lewis OT, Macadam CR, Mulhair PO, Pereira da Conceicoa L, Price BW, Raper C, Sivell O, and Sivess L

Abstract

The Darwin Tree of Life (DToL) project aims to sequence and assemble high-quality genomes from all eukaryote species in Britain and Ireland, with the first phase of the project concentrating on family-level coverage plus species of particular ecological, biomedical or evolutionary interest. We summarise the processes involved in (1) assessing the UK arthropod fauna and the status of individual species on UK lists; (2) prioritising and collecting species for initial genome sequencing; (3) handling methods to ensure that high-quality genomic DNA is preserved; and (4) compiling standard operating procedures for processing specimens for genome sequencing, identification verification and voucher specimen curation. We briefly explore some lessons learned from the pilot phase of DToL and the impact of the Covid-19 pandemic., Competing Interests: No competing interests were disclosed., (Copyright: © 2023 Crowley L et al.)

Published
2023
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9. The genome sequence of the small elephant hawk moth, Deilephila porcellus (Linnaeus, 1758).

Author

Boyes D and Sivess L

Abstract

We present a genome assembly from an individual male Deilephila porcellus (the small elephant hawk moth; Arthropoda; Insecta; Lepidoptera; Sphingidae). The genome sequence is 402 megabases in span. The majority of the assembly (99.99%) is scaffolded into 29 chromosomal pseudomolecules, with the Z sex chromosome assembled., Competing Interests: No competing interests were disclosed., (Copyright: © 2022 Boyes D et al.)

Published
2022
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