176 results on '"Skwark, Marcin"'
Search Results
2. Designing a Prospective COVID-19 Therapeutic with Reinforcement Learning
3. Early computational detection of potential high-risk SARS-CoV-2 variants
4. Mycobacterium abscessus pathogenesis identified by phenogenomic analyses
5. The structural basis of Cdc7-Dbf4 kinase dependent targeting and phosphorylation of the MCM2-7 double hexamer
6. 3D Deep Learning for Biological Function Prediction from Physical Fields
7. HARP: a database of structural impacts of systematic missense mutations in drug targets of Mycobacterium leprae
8. Computational saturation mutagenesis to predict structural consequences of systematic mutations in the beta subunit of RNA polymerase in Mycobacterium leprae
9. Improving contact prediction along three dimensions
10. A Foundational Large Language Model for Edible Plant Genomes
11. De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments
12. Urinary Proteins of Female Domestic Dog (Canis familiaris) during Ovarian Cycle
13. The Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics
14. The influence of manual semen collection in male trained dogs (Canis familiaris), in the presence or absence of a female in estrus, on the concentrations of cortisol, oxytocin, prolactin and testosterone
15. The Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics
16. Peptide-MHC Structure Prediction With Mixed Residue and Atom Graph Neural Network
17. Ins and Outs of the Bacillus subtilis Membrane Proteome
18. The Collagen Receptor Discoidin Domain Receptor 1b Enhances Integrin β1-Mediated Cell Migration by Interacting With Talin and Promoting Rac1 Activation
19. Early Computational Detection of Potential High Risk SARS-CoV-2 Variants
20. The pathobiology ofMycobacterium abscessusrevealed through phenogenomic analysis
21. Membrane remodeling capacity of a vesicle-inducing glycosyltransferase
22. 3D Deep Learning for Biological Function Prediction from Physical Fields
23. PconsC: combination of direct information methods and alignments improves contact prediction
24. PconsD: ultra rapid, accurate model quality assessment for protein structure prediction
25. Improved predictions by Pcons.net using multiple templates
26. Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation
27. SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology
28. Computational Saturation Mutagenesis to predict structural consequences of systematic mutations on protein stability and rifampin interactions in the β subunit of RNA polymerase inMycobacterium leprae
29. Analysis of metabolic pathways in mycobacteria to aid drug-target identification
30. Mycobacterial genomics and structural bioinformatics: opportunities and challenges in drug discovery
31. Mabellini: a genome-wide database for understanding the structural proteome and evaluating prospective antimicrobial targets of the emerging pathogen Mycobacterium abscessus
32. Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation.
33. Late Breaking Abstract - Multidimensional genomic mapping reveals the pathophysiology of Mycobacterium abscessus
34. Predicting accurate contacts in thousands of Pfam domain families using PconsC3
35. Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis
36. Membrane protein contact and structure prediction using co-evolution in conjunction with machine learning
37. Predicting accurate contacts in thousands of Pfam domain families using PconsC3
38. Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis
39. Discoidin domain receptor 1 kinase activity is required for regulating collagen IV synthesis
40. Accurate contact predictions for thousands of protein families using PconsC3
41. Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis
42. Ensemble methods for protein structure prediction
43. The Ins and Outs of the Bacillus subtilis Membrane Proteome
44. In's and out's of the Bacillus subtilis membrane proteome
45. Improved Contact Predictions Using the Recognition of Protein Like Contact Patterns
46. PconsFold : improved contact predictions improve protein models
47. Improved Contact Predictions Using the Recognition of Protein Like Contact Patterns
48. Improving Contact Prediction along Three Dimensions
49. PconsFold: improved contact predictions improve protein models
50. Membrane protein shaving with thermolysin can be used to evaluate topology predictors
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