36 results on '"Slice DE"'
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2. Shape Analysis of 3D Head Scan Data for U.S. Respirator Users
- Author
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Slice DennisE, Benson Stacey, Zhuang Ziqing, Lynch Stephanie, and Viscusi DennisJ
- Subjects
Telecommunication ,TK5101-6720 ,Electronics ,TK7800-8360 - Abstract
In 2003, the National Institute for Occupational Safety and Health (NIOSH) conducted a head-and-face anthropometric survey of diverse, civilian respirator users. Of the 3,997 subjects measured using traditional anthropometric techniques, surface scans and 26 three-dimensional (3D) landmark locations were collected for 947 subjects. The objective of this study was to report the size and shape variation of the survey participants using the 3D data. Generalized Procrustes Analysis (GPA) was conducted to standardize configurations of landmarks associated with individuals into a common coordinate system. The superimposed coordinates for each individual were used as commensurate variables that describe individual shape and were analyzed using Principal Component Analysis (PCA) to identify population variation. The first four principal components (PC) account for 49% of the total sample variation. The first PC indicates that overall size is an important component of facial variability. The second PC accounts for long and narrow or short and wide faces. Longer narrow orbits versus shorter wider orbits can be described by PC3, and PC4 represents variation in the degree of ortho/prognathism. Geometric Morphometrics provides a detailed and interpretable assessment of morphological variation that may be useful in assessing respirators and devising new test and certification standards.
- Published
- 2010
3. Testing Reliability of the Computational Age-At-Death Estimation Methods between Five Observers Using Three-Dimensional Image Data of the Pubic Symphysis.
- Author
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Kim J, Algee-Hewitt BFB, Stoyanova DK, Figueroa-Soto C, and Slice DE
- Subjects
- Adult, Forensic Anthropology, Humans, Lasers, Observer Variation, Pubic Symphysis diagnostic imaging, Reproducibility of Results, Age Determination by Skeleton methods, Imaging, Three-Dimensional, Models, Statistical, Pubic Symphysis anatomy & histology
- Abstract
In an effort to standardize data collection and analysis in age estimation, a series of computational methods utilizing high-dimensional image data of the age indicator have recently been proposed as an alternative to subjective visual, trait-to-phase matching techniques. To systematically quantify the reproducibility of such methods, we investigate the intrascan variability and within- and between-observer reliability in initial scan data capturing and editing using 3D laser scans of the Suchey-Brooks pubic symphysis casts and five shape-based computational methods. Our results show that (i) five observers with various training background and experience levels edited the scans consistently for all three trials and the derived shape measures and age estimates were in excellent agreement among observers, and (ii) the computational methods are robust to a measured degree of scan trimming error. This study supports the application of computational methods to 3D laser scanned images for reliable age-at-death estimation, with reduced subjectivity., (© 2018 American Academy of Forensic Sciences.)
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- 2019
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4. A Study on the Asymmetry of the Human Left and Right Pubic Symphyseal Surfaces Using High-Definition Data Capture and Computational Shape Methods.
- Author
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Stoyanova DK, Algee-Hewitt BFB, Kim J, and Slice DE
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- Adult, Aged, Aged, 80 and over, Algorithms, Forensic Anthropology methods, Humans, Imaging, Three-Dimensional, Lasers, Male, Middle Aged, Pubic Symphysis diagnostic imaging, White People, Young Adult, Age Determination by Skeleton methods, Image Processing, Computer-Assisted, Pubic Symphysis anatomy & histology
- Abstract
The pubic symphysis is among the most commonly used bilateral age indicators. Because of potential differences between right and left sides, it is necessary to investigate within-individual asymmetry, which can inflate age estimation error. This study uses 3D laser scans of paired pubic symphyses for 88 documented White males. Scan data are analyzed by numerical shape algorithms, proposed as an alternative to traditional visual assessment techniques. Results are used to quantify the within-individual asymmetry, evaluating if one side produces a better age-estimate. Relationships between the asymmetry and advanced age, weight, and stature are examined. This analysis indicates that the computational, shape-based techniques are robust to asymmetry (>80% of paired differences are within 10 years and >90% are within 15 years). For notably more asymmetric cases, differences in estimates are not associated with life history factors. Based on this study, either side can be used for age-at-death estimation by the computational methods., (© 2018 American Academy of Forensic Sciences.)
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- 2019
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5. The Development and Use of Computational Tools in Forensic Science.
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Slice DE
- Abstract
Modern computational resources make available a rich tool kit of statistical methods that can be applied to forensic questions. This tool kit is built on the foundation of statistical developments dating back to the 19th century. To fully and effectively exploit these developments, both the makers and users of software must be keenly aware of the quality, that is, the accuracy and precision, of the data being modeled or analyzed, and end users must be sufficiently familiar with the underlying theory to understand the process and results of any analysis or software they use. This is especially important for medicolegal personnel who might be called upon to testify in a court of law and be subject to cross-examination. With respect to the development of computational tools, it is increasingly important that they be made available as open-source code to avoid the pitfalls of commercial software support and the potential dependence of end users on orphaned software.
- Published
- 2018
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6. Age-at-Death Estimation for Modern Populations in Mexico and Puerto Rico through the Use of 3D Laser Scans of the Pubic Symphysis.
- Author
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Soto CF, Algee-Hewitt BFB, Morante GB, Slice DE, and Steadman DW
- Abstract
Reliable age-at-death estimates from the adult skeleton are of fundamental importance in forensic anthropology, because it contributes to the identity parameters used in a medicolegal death investigation. However, reliable estimates are difficult because many traditional aging methods depend on a set of population-specific criteria derived from individuals of European and African descent. The absence of information on the potential differences in the aging patterns of underrepresented, especially Latinx, populations may hinder our efforts to produce useful age-at-death estimates. In response to these concerns, this study explores the utility of currently available aging techniques and whether population-specific aging methods among Latinx groups are needed. The authors obtained data from two skeletal collections representing modern individuals of Mexican and Puerto Rican origin. They examined five newly developed computational shape-based techniques using 3D laser scans of the pubic symphysis and one traditional bone-to-phase technique. A validation test of all computational and traditional methods was implemented, and new population-specific equations using the computational algorithms were generated and tested against a subsample. Results suggest that traditional and computational aging techniques applied to the pubic symphysis perform best with individuals within 35-45 years of age. Levels of bias and inaccuracy increase as chronological age increases, with overestimation of individuals younger than 35 years and underestimation of individuals older than 45 years. New regression models provided error rates comparable to, and in some occasions outperformed, the original computational models developed on white American males, but age estimates did not significantly improve. This study shows that population-specific models do not necessarily improve age estimates in Latinx samples. Results do suggest that computational methods can ultimately outperform the Suchey-Brooks method and provide improved objectivity when estimating age at death in Latinx samples.
- Published
- 2018
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7. A Computational Framework for Age-at-Death Estimation from the Skeleton: Surface and Outline Analysis of 3D Laser Scans of the Adult Pubic Symphysis.
- Author
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Stoyanova DK, Algee-Hewitt BFB, Kim J, and Slice DE
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Algorithms, Female, Forensic Anthropology, Humans, Image Processing, Computer-Assisted, Male, Middle Aged, Regression Analysis, Young Adult, Age Determination by Skeleton methods, Imaging, Three-Dimensional, Lasers, Pubic Symphysis anatomy & histology
- Abstract
In forensic anthropology, age-at-death estimation typically requires the macroscopic assessment of the skeletal indicator and its association with a phase or score. High subjectivity and error are the recognized disadvantages of this approach, creating a need for alternative tools that enable the objective and mathematically robust assessment of true chronological age. We describe, here, three fully computational, quantitative shape analysis methods and a combinatory approach that make use of three-dimensional laser scans of the pubic symphysis. We report a novel age-related shape measure, focusing on the changes observed in the ventral margin curvature, and refine two former methods, whose measures capture the flatness of the symphyseal surface. We show how we can decrease age-estimation error and improve prior results by combining these outline and surface measures in two multivariate regression models. The presented models produce objective age-estimates that are comparable to current practices with root-mean-square-errors between 13.7 and 16.5 years., (© 2017 American Academy of Forensic Sciences.)
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- 2017
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8. Artificial neural networks and geometric morphometric methods as a means for classification: A case-study using teeth from Carcharhinus sp. (Carcharhinidae).
- Author
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Soda KJ, Slice DE, and Naylor GJ
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- Animals, Sharks anatomy & histology, Species Specificity, Neural Networks, Computer, Sharks classification, Tooth anatomy & histology
- Abstract
Over the past few decades, geometric morphometric methods have become increasingly popular and powerful tools to describe morphological data while over the same period artificial neural networks have had a similar rise in the classification of specimens to preconceived groups. However, there has been little research into how well these two systems operate together, particularly in comparison to preexisting techniques. In this study, geometric morphometric data and multilayer perceptrons, a style of artificial neural network, were used to classify shark teeth from the genus Carcharhinus to species. Three datasets of varying size and species differences were used. We compared the performance of this combination with geometric morphometric data in a linear discriminate function analysis, linear measurements in a linear discriminate function analysis, and a preexisting methodology from the literature that incorporates linear measurements and a two-layered discriminate function analysis. Across datasets, geometric morphometric data in a multilayer perceptron tended to yield modest accuracies but accuracies that varied less across species whereas other methods were able to achieve higher accuracies in some species at the expense of lower accuracies in others. Further, the performance of the two-layered discriminate function analysis illustrates that constraining what material is classified can increase the accuracy of a method. Based on this tradeoff, the best methodology will then depend on the scope of the study and the amount of material available. J. Morphol. 278:131-141, 2017. ©© 2016 Wiley Periodicals,Inc., (© 2016 Wiley Periodicals, Inc.)
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- 2017
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9. A Landmark-Free Method for Three-Dimensional Shape Analysis.
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Pomidor BJ, Makedonska J, and Slice DE
- Subjects
- Algorithms, Models, Theoretical
- Abstract
Background: The tools and techniques used in morphometrics have always aimed to transform the physical shape of an object into a concise set of numerical data for mathematical analysis. The advent of landmark-based morphometrics opened new avenues of research, but these methods are not without drawbacks. The time investment required of trained individuals to accurately landmark a data set is significant, and the reliance on readily-identifiable physical features can hamper research efforts. This is especially true of those investigating smooth or featureless surfaces., Methods: In this paper, we present a new method to perform this transformation for data obtained from high-resolution scanning technology. This method uses surface scans, instead of landmarks, to calculate a shape difference metric analogous to Procrustes distance and perform superimposition. This is accomplished by building upon and extending the Iterative Closest Point algorithm. We also explore some new ways this data can be used; for example, we can calculate an averaged surface directly and visualize point-wise shape information over this surface. Finally, we briefly demonstrate this method on a set of primate skulls and compare the results of the new methodology with traditional geometric morphometric analysis.
- Published
- 2016
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10. An enhanced computational method for age-at-death estimation based on the pubic symphysis using 3D laser scans and thin plate splines.
- Author
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Stoyanova D, Algee-Hewitt BF, and Slice DE
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Algorithms, Humans, Lasers, Male, Middle Aged, Young Adult, Age Determination by Skeleton methods, Forensic Anthropology methods, Imaging, Three-Dimensional methods, Pubic Symphysis anatomy & histology
- Abstract
Objectives: The pubic symphysis is frequently used to estimate age-at-death from the adult skeleton. Assessment methods require the visual comparison of the bone morphology against age-informative characteristics that represent a series of phases. Age-at-death is then estimated from the age-range previously associated with the chosen phase. While easily executed, the "morphoscopic" process of feature-scoring and bone-to-phase-matching is known to be subjective. Studies of method and practitioner error demonstrate a need for alternative tools to quantify age-progressive change in the pubic symphysis. This article proposes a more objective, quantitative method that analyzes three-dimensional (3D) surface scans of the pubic symphysis using a thin plate spline algorithm (TPS)., Materials and Methods: This algorithm models the bending of a flat plane to approximately match the surface of the bone and minimizes the bending energy required for this transformation. Known age-at-death and bending energy were used to construct a linear model to predict age from observed bending energy. This approach is tested with scans from 44 documented white male skeletons and 12 casts., Results: The results of the surface analysis show a significant association (regression p-value = 0.0002 and coefficient of determination = 0.2270) between the minimum bending energy and age-at-death, with a root mean square error of ≈19 years., Discussion: This TPS method yields estimates comparable to established methods but offers a fully integrated, objective and quantitative framework of analysis and has potential for use in archaeological and forensic casework., (© 2015 Wiley Periodicals, Inc.)
- Published
- 2015
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11. Modeling Bone Surface Morphology: A Fully Quantitative Method for Age-at-Death Estimation Using the Pubic Symphysis.
- Author
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Slice DE and Algee-Hewitt BF
- Subjects
- Adolescent, Adult, Aged, Aged, 80 and over, Child, Forensic Anthropology methods, Humans, Image Processing, Computer-Assisted, Imaging, Three-Dimensional, Male, Middle Aged, Regression Analysis, Young Adult, Age Determination by Skeleton methods, Lasers, Pubic Symphysis anatomy & histology
- Abstract
The pubic symphysis is widely used in age estimation for the adult skeleton. Standard practice requires the visual comparison of surface morphology against criteria representing predefined phases and the estimation of case-specific age from an age range associated with the chosen phase. Known problems of method and observer error necessitate alternative tools to quantify age-related change in pubic morphology. This paper presents an objective, fully quantitative method for estimating age-at-death from the skeleton, which exploits a variance-based score of surface complexity computed from vertices obtained from a scanner sampling the pubic symphysis. For laser scans from 41 modern American male skeletons, this method produces results that are significantly associated with known age-at-death (RMSE = 17.15 years). Chronological age is predicted, therefore, equally well, if not, better, with this robust, objective, and fully quantitative method than with prevailing phase-aging systems. This method contributes to forensic casework by responding to medico-legal expectations for evidence standards., (© 2015 American Academy of Forensic Sciences.)
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- 2015
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12. Biomechanical implications of intraspecific shape variation in chimpanzee crania: moving toward an integration of geometric morphometrics and finite element analysis.
- Author
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Smith AL, Benazzi S, Ledogar JA, Tamvada K, Pryor Smith LC, Weber GW, Spencer MA, Dechow PC, Grosse IR, Ross CF, Richmond BG, Wright BW, Wang Q, Byron C, Slice DE, and Strait DS
- Subjects
- Animals, Biomechanical Phenomena physiology, Bite Force, Female, Male, Masticatory Muscles anatomy & histology, Masticatory Muscles physiology, Mathematics, Models, Biological, Pan troglodytes classification, Principal Component Analysis, Species Specificity, Finite Element Analysis, Pan troglodytes anatomy & histology, Pan troglodytes physiology, Skull anatomy & histology, Skull physiology
- Abstract
In a broad range of evolutionary studies, an understanding of intraspecific variation is needed in order to contextualize and interpret the meaning of variation between species. However, mechanical analyses of primate crania using experimental or modeling methods typically encounter logistical constraints that force them to rely on data gathered from only one or a few individuals. This results in a lack of knowledge concerning the mechanical significance of intraspecific shape variation that limits our ability to infer the significance of interspecific differences. This study uses geometric morphometric methods (GM) and finite element analysis (FEA) to examine the biomechanical implications of shape variation in chimpanzee crania, thereby providing a comparative context in which to interpret shape-related mechanical variation between hominin species. Six finite element models (FEMs) of chimpanzee crania were constructed from CT scans following shape-space Principal Component Analysis (PCA) of a matrix of 709 Procrustes coordinates (digitized onto 21 specimens) to identify the individuals at the extremes of the first three principal components. The FEMs were assigned the material properties of bone and were loaded and constrained to simulate maximal bites on the P(3) and M(2) . Resulting strains indicate that intraspecific cranial variation in morphology is associated with quantitatively high levels of variation in strain magnitudes, but qualitatively little variation in the distribution of strain concentrations. Thus, interspecific comparisons should include considerations of the spatial patterning of strains rather than focus only on their magnitudes., (© 2014 Wiley Periodicals, Inc.)
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- 2015
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13. The feeding biomechanics and dietary ecology of Paranthropus boisei.
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Smith AL, Benazzi S, Ledogar JA, Tamvada K, Pryor Smith LC, Weber GW, Spencer MA, Lucas PW, Michael S, Shekeban A, Al-Fadhalah K, Almusallam AS, Dechow PC, Grosse IR, Ross CF, Madden RH, Richmond BG, Wright BW, Wang Q, Byron C, Slice DE, Wood S, Dzialo C, Berthaume MA, van Casteren A, and Strait DS
- Subjects
- Adaptation, Physiological physiology, Animals, Biological Evolution, Biomechanical Phenomena physiology, Bite Force, Eating physiology, Ecology, Finite Element Analysis, Imaging, Three-Dimensional, Mathematics, Models, Biological, Dental Arch anatomy & histology, Dental Arch physiology, Diet, Hominidae anatomy & histology, Hominidae physiology, Skull anatomy & histology, Skull physiology
- Abstract
The African Plio-Pleistocene hominins known as australopiths evolved derived craniodental features frequently interpreted as adaptations for feeding on either hard, or compliant/tough foods. Among australopiths, Paranthropus boisei is the most robust form, exhibiting traits traditionally hypothesized to produce high bite forces efficiently and strengthen the face against feeding stresses. However, recent mechanical analyses imply that P. boisei may not have been an efficient producer of bite force and that robust morphology in primates is not necessarily strong. Here we use an engineering method, finite element analysis, to show that the facial skeleton of P. boisei is structurally strong, exhibits a strain pattern different from that in chimpanzees (Pan troglodytes) and Australopithecus africanus, and efficiently produces high bite force. It has been suggested that P. boisei consumed a diet of compliant/tough foods like grass blades and sedge pith. However, the blunt occlusal topography of this and other species suggests that australopiths are adapted to consume hard foods, perhaps including grass and sedge seeds. A consideration of evolutionary trends in morphology relating to feeding mechanics suggests that food processing behaviors in gracile australopiths evidently were disrupted by environmental change, perhaps contributing to the eventual evolution of Homo and Paranthropus., (© 2014 Wiley Periodicals, Inc.)
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- 2015
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14. The utility of cranial ontogeny for phylogenetic inference: a case study in crocodylians using geometric morphometrics.
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Watanabe A and Slice DE
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- Alligators and Crocodiles genetics, Alligators and Crocodiles growth & development, Animals, Body Size, Classification methods, Alligators and Crocodiles anatomy & histology, Phylogeny, Skull anatomy & histology
- Abstract
The degree to which the ontogeny of organisms could facilitate our understanding of phylogenetic relationships has long been a subject of contention in evolutionary biology. The famed notion that 'ontogeny recapitulates phylogeny' has been largely discredited, but there remains an expectation that closely related organisms undergo similar morphological transformations throughout ontogeny. To test this assumption, we used three-dimensional geometric morphometric methods to characterize the cranial morphology of 10 extant crocodylian species and construct allometric trajectories that model the post-natal ontogenetic shape changes. Using time-calibrated molecular and morphological trees, we employed a suite of comparative phylogenetic methods to assess the extent of phylogenetic signal in these trajectories. All analyses largely demonstrated a lack of significant phylogenetic signal, indicating that ontogenetic shape changes contain little phylogenetic information. Notably, some Mantel tests yielded marginally significant results when analysed with the morphological tree, which suggest that the underlying signal in these trajectories is correlated with similarities in the adult cranial morphology. However, despite these instances, all other analyses, including more powerful tests for phylogenetic signal, recovered statistical and visual evidence against the assumption that similarities in ontogenetic shape changes are commensurate with phylogenetic relatedness and thus bring into question the efficacy of using allometric trajectories for phylogenetic inference., (© 2014 The Authors. Journal of Evolutionary Biology © 2014 European Society For Evolutionary Biology.)
- Published
- 2014
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15. Influence of edentulism on human orbit and zygomatic arch shape.
- Author
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Williams SE and Slice DE
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- Aged, Aged, 80 and over, Female, Humans, Male, Maxilla, Middle Aged, Black or African American, Jaw, Edentulous pathology, Orbit pathology, White People, Zygoma pathology
- Abstract
Edentulism, or tooth loss, seriously alters the appearance of the lower facial skeleton. The aim of this study was to determine if complete maxillary edentulism also impacts the curvature shape of the orbits and zygomatic arches in elderly adults. The study was conducted on 80 crania comprising two cross-sectional populations of elderly African- and European-Americans (60-80 years old). Forty of the crania possessed intact dentition; the remaining 40 exhibited complete edentulism with tooth socket resorption. Three-dimensional semilandmarks representing the curvature of the orbits and zygomatic arches were collected using a hand-held digitizer. Each craniofacial region's semilandmarks were aligned into a common coordinate system via generalized Procrustes superimposition. Regional variation in shape was explored via principal component analysis, multivariate analysis of variance, discriminant function analysis, cross-validation, and vector plots. Shape differences between the edentulous and dentate groups were detected in both the orbits (P = 0.0022) and zygomatic arches (P = 0.0026). Ancestry and sex differences were also identified in both regions. Orbit data correctly classified dentate crania 65% of the time and edentulous crania 72.5% of the time. Zygomatic arch data correctly classified 75% dentate and 60% of edentulous crania. The individual curves constituting each region also exhibited shape alteration with tooth loss, with the exception of the inferior zygomatic curve. Vector plots revealed patterns of superoinferior expansion, and medial and lateral recession depending on the region examined. These results suggest a relationship exists between maxillary edentulism and changes in the surrounding craniofacial structures., (Copyright © 2013 Wiley Periodicals, Inc.)
- Published
- 2014
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16. Viewpoints: diet and dietary adaptations in early hominins: the hard food perspective.
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Strait DS, Constantino P, Lucas PW, Richmond BG, Spencer MA, Dechow PC, Ross CF, Grosse IR, Wright BW, Wood BA, Weber GW, Wang Q, Byron C, Slice DE, Chalk J, Smith AL, Smith LC, Wood S, Berthaume M, Benazzi S, Dzialo C, Tamvada K, and Ledogar JA
- Subjects
- Animals, Carbon Isotopes analysis, Dental Enamel anatomy & histology, Eating, Finite Element Analysis, Hominidae physiology, Adaptation, Biological, Anthropology methods, Biological Evolution, Diet, Hominidae anatomy & histology
- Abstract
Recent biomechanical analyses examining the feeding adaptations of early hominins have yielded results consistent with the hypothesis that hard foods exerted a selection pressure that influenced the evolution of australopith morphology. However, this hypothesis appears inconsistent with recent reconstructions of early hominin diet based on dental microwear and stable isotopes. Thus, it is likely that either the diets of some australopiths included a high proportion of foods these taxa were poorly adapted to consume (i.e., foods that they would not have processed efficiently), or that aspects of what we thought we knew about the functional morphology of teeth must be wrong. Evaluation of these possibilities requires a recognition that analyses based on microwear, isotopes, finite element modeling, and enamel chips and cracks each test different types of hypotheses and allow different types of inferences. Microwear and isotopic analyses are best suited to reconstructing broad dietary patterns, but are limited in their ability to falsify specific hypotheses about morphological adaptation. Conversely, finite element analysis is a tool for evaluating the mechanical basis of form-function relationships, but says little about the frequency with which specific behaviors were performed or the particular types of food that were consumed. Enamel chip and crack analyses are means of both reconstructing diet and examining biomechanics. We suggest that current evidence is consistent with the hypothesis that certain derived australopith traits are adaptations for consuming hard foods, but that australopiths had generalized diets that could include high proportions of foods that were both compliant and tough., (Copyright © 2013 Wiley Periodicals, Inc.)
- Published
- 2013
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17. A new method for the analysis of soft tissues with data acquired under field conditions.
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Sonnweber RS, Stobbe N, Zavala Romero O, Slice DE, Fieder M, and Wallner B
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- Animals, Female, Macaca anatomy & histology, Reproducibility of Results, Image Processing, Computer-Assisted methods, Organ Specificity
- Abstract
Analyzing soft-tissue structures is particularly challenging due to the lack of homologous landmarks that can be reliably identified across time and specimens. This is particularly true when data are to be collected under field conditions. Here, we present a method that combines photogrammetric techniques and geometric morphometrics methods (GMM) to quantify soft tissues for their subsequent volumetric analysis. We combine previously developed methods for landmark data acquisition and processing with a custom program for volumetric computations. Photogrammetric methods are a particularly powerful tool for field studies as they allow for image acquisition with minimal equipment requirements and for the acquisition of the spatial coordinates of points (anatomical landmarks or others) from these images. For our method, a limited number of homologous landmarks, i.e., points that can be found on any specimen independent of space and time, and further distinctive points, which may vary over time, space and subject, are identified on two-dimensional photographs and their three-dimensional coordinates estimated using photogrammetric methods. The three-dimensional configurations are oriented by the spatial principal components (PCs) of the homologous points. Crucially, this last step orients the configuration such that x and y-information (PC1 and PC2 coordinates) constitute an anatomically-defined plane with the z-values (PC3 coordinate) in the direction of interest for volume computation. The z-coordinates are then used to estimate the volume of the tissue. We validate our method using a physical, geometric model of known dimensions and physical (wax) models designed to approximate perineal swellings in female macaques. To demonstrate the usefulness and potential of our method, we use it to estimate the volumes of Barbary macaque sexual swellings recorded in the field with video images. By analyzing both the artificial data and real monkey swellings, we validate our method's accuracy and illustrate its potential for application in important areas of biological research.
- Published
- 2013
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18. Microwear, mechanics and the feeding adaptations of Australopithecus africanus.
- Author
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Strait DS, Weber GW, Constantino P, Lucas PW, Richmond BG, Spencer MA, Dechow PC, Ross CF, Grosse IR, Wright BW, Wood BA, Wang Q, Byron C, and Slice DE
- Subjects
- Animals, Biomechanical Phenomena, Food, Fossils, Feeding Behavior physiology, Hominidae anatomy & histology, Hominidae physiology, Tooth anatomy & histology, Tooth physiology, Tooth Wear physiopathology
- Abstract
Recent studies of dental microwear and craniofacial mechanics have yielded contradictory interpretations regarding the feeding ecology and adaptations of Australopithecus africanus. As part of this debate, the methods used in the mechanical studies have been criticized. In particular, it has been claimed that finite element analysis has been poorly applied to this research question. This paper responds to some of these mechanical criticisms, highlights limitations of dental microwear analysis, and identifies avenues of future research., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2012
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19. Regional shape change in adult facial bone curvature with age.
- Author
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Williams SE and Slice DE
- Subjects
- Adolescent, Adult, Aged, Black People, Cephalometry, Female, Humans, Male, Middle Aged, Multivariate Analysis, White People, Aging physiology, Facial Bones anatomy & histology
- Abstract
Life expectancies have increased dramatically over the last 100 years, affording greater opportunities to study the impact of age on adult craniofacial morphology. This article employs a novel application of established geometric morphometric methods to examine shape differences in adult regional facial bone curvature with age. Three-dimensional semilandmarks representing the curvature of the orbits, zygomatic arches, nasal aperture, and maxillary alveolar process were collected from a cross-sectional cranial sample of mixed sex and ancestry (male and female; African- and European-American), partitioned into three age groups (young adult = 18-39; middle-aged = 40-59 years; and elderly = 60+ years). Each facial region's semilandmarks were aligned into a common coordinate system via generalized Procrustes superimposition. Regional variation in shape was then explored via a battery of multivariate statistical techniques. Age-related shape differences were detected in the orbits, zygomatic arches, and maxillary alveolar process. Interactions between age, sex, and ancestry were also identified. Vector plots revealed patterns of superoinferior compression, lateral expansion, and posterior recession depending on the population/subpopulation, location, and age groups examined. These findings indicate that adult craniofacial curvature shape is not static throughout human life. Instead, age-related spatial modifications occur in various regions of the craniofacial skeleton. Moreover, these regional alterations vary not only through time, but across human populations and the sexes., (© 2010 Wiley-Liss, Inc.)
- Published
- 2010
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20. The structural rigidity of the cranium of Australopithecus africanus: implications for diet, dietary adaptations, and the allometry of feeding biomechanics.
- Author
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Strait DS, Grosse IR, Dechow PC, Smith AL, Wang Q, Weber GW, Neubauer S, Slice DE, Chalk J, Richmond BG, Lucas PW, Spencer MA, Schrein C, Wright BW, Byron C, and Ross CF
- Subjects
- Animals, Biomechanical Phenomena, Finite Element Analysis, Hominidae physiology, Humans, Muscle, Skeletal physiology, Skull physiology, Adaptation, Physiological, Biological Evolution, Diet, Hominidae anatomy & histology, Muscle, Skeletal anatomy & histology, Skull anatomy & histology
- Abstract
Australopithecus africanus is an early hominin (i.e., human relative) believed to exhibit stress-reducing adaptations in its craniofacial skeleton that may be related to the consumption of resistant food items using its premolar teeth. Finite element analyses simulating molar and premolar biting were used to test the hypothesis that the cranium of A. africanus is structurally more rigid than that of Macaca fascicularis, an Old World monkey that lacks derived australopith facial features. Previously generated finite element models of crania of these species were subjected to isometrically scaled loads, permitting a direct comparison of strain magnitudes. Moreover, strain energy (SE) in the models was compared after results were scaled to account for differences in bone volume and muscle forces. Results indicate that strains in certain skeletal regions below the orbits are higher in M. fascicularis than in A. africanus. Moreover, although premolar bites produce von Mises strains in the rostrum that are elevated relative to those produced by molar biting in both species, rostral strains are much higher in the macaque than in the australopith. These data suggest that at least the midface of A. africanus is more rigid than that of M. fascicularis. Comparisons of SE reveal that the A. africanus cranium is, overall, more rigid than that of M. fascicularis during premolar biting. This is consistent with the hypothesis that this hominin may have periodically consumed large, hard food items. However, the SE data suggest that the A. africanus cranium is marginally less rigid than that of the macaque during molar biting. It is hypothesized that the SE results are being influenced by the allometric scaling of cranial cortical bone thickness., ((c) 2010 Wiley-Liss, Inc.)
- Published
- 2010
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21. The feeding biomechanics and dietary ecology of Australopithecus africanus.
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Strait DS, Weber GW, Neubauer S, Chalk J, Richmond BG, Lucas PW, Spencer MA, Schrein C, Dechow PC, Ross CF, Grosse IR, Wright BW, Constantino P, Wood BA, Lawn B, Hylander WL, Wang Q, Byron C, Slice DE, and Smith AL
- Subjects
- Animals, Biological Evolution, Diet, Ecology, Feeding Behavior, Finite Element Analysis, Fossils, Hominidae anatomy & histology, Macaca, Models, Theoretical, Muscles pathology, Paleontology methods, Software, Biomechanical Phenomena
- Abstract
The African Plio-Pleistocene hominins known as australopiths evolved a distinctive craniofacial morphology that traditionally has been viewed as a dietary adaptation for feeding on either small, hard objects or on large volumes of food. A historically influential interpretation of this morphology hypothesizes that loads applied to the premolars during feeding had a profound influence on the evolution of australopith craniofacial form. Here, we test this hypothesis using finite element analysis in conjunction with comparative, imaging, and experimental methods. We find that the facial skeleton of the Australopithecus type species, A. africanus, is well suited to withstand premolar loads. However, we suggest that the mastication of either small objects or large volumes of food is unlikely to fully explain the evolution of facial form in this species. Rather, key aspects of australopith craniofacial morphology are more likely to be related to the ingestion and initial preparation of large, mechanically protected food objects like large nuts and seeds. These foods may have broadened the diet of these hominins, possibly by being critical resources that australopiths relied on during periods when their preferred dietary items were in short supply. Our analysis reconciles apparent discrepancies between dietary reconstructions based on biomechanics, tooth morphology, and dental microwear.
- Published
- 2009
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22. Face to Face : The Perception of Automotive Designs.
- Author
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Windhager S, Slice DE, Schaefer K, Oberzaucher E, Thorstensen T, and Grammer K
- Abstract
Over evolutionary time, humans have developed a selective sensitivity to features in the human face that convey information on sex, age, emotions, and intentions. This ability might not only be applied to our conspecifics nowadays, but also to other living objects (i.e., animals) and even to artificial structures, such as cars. To investigate this possibility, we asked people to report the characteristics, emotions, personality traits, and attitudes they attribute to car fronts, and we used geometric morphometrics (GM) and multivariate statistical methods to determine and visualize the corresponding shape information. Automotive features and proportions are found to covary with trait perception in a manner similar to that found with human faces. Emerging analogies are discussed. This study should have implications for both our understanding of our prehistoric psyche and its interrelation with the modern world.
- Published
- 2008
- Full Text
- View/download PDF
23. Age and gender based biomechanical shape and size analysis of the pediatric brain.
- Author
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Danelson KA, Geer CP, Stitzel JD, Slice DE, and Takhounts EG
- Subjects
- Accidents, Traffic, Adolescent, Age Factors, Biomechanical Phenomena, Brain Stem pathology, Cerebellum pathology, Cerebral Ventricles pathology, Cerebrum pathology, Child, Child, Preschool, Female, Humans, Infant, Infant, Newborn, Magnetic Resonance Imaging, Male, Models, Theoretical, Sex Factors, Young Adult, Brain pathology, Brain Injuries pathology
- Abstract
Injuries caused by motor vehicle crashes (MVCs) are the leading cause of head injury and death for children in the United States. This study aims to describe the shape and size (morphologic) changes of the cerebrum, cerebellum, brainstem, and ventricles of the pediatric occupant to better predict injury and assess how these changes affect finite element model (FEM) response. To quantify morphologic differences in the brain, a Generalized Procrustes Analysis (GPA) with a sliding landmark method was conducted to isolate morphologic changes using magnetic resonance images of 63 normal subjects. This type of geometric morphometric analysis was selected for its ability to identify homologous landmarks on structures with few true landmarks and isolate the shape and size of the individuals studied. From the resulting landmark coordinates, the shape and size changes were regressed against age to develop a model describing morphologic changes in the pediatric brain as a function of age. The most statistically significant shape change was in the cerebrum with p-values of 0.00346 for males and 0.00829 for females. The age-based model explains over 80% of the variation in size in the cerebrum. Using size and shape models, affine transformations were applied to the SIMon FEM to determine differences in response given differences in size and size plus shape. The geometric centroid of the elements exceeding 15% strain was calculated and compared to the geometric centroid of the entire structure. Given the same Haversine pulse, the centroid location, a metric for the spatial distribution of the elements exceeding an injury threshold, varied based on which transformation was applied to the model. To assess the overall response of the model, three injury metrics were examined to determine the magnitude of the metrics each element sustained and the overall volume of elements that experienced that value. These results suggested that the overall response of the model was driven by the variation in size, with little variation due to changes in shape. This study demonstrates a new methodology to quantify the shape and size variation of the brain from infancy to adulthood. The use of the changes in shape and size when applied to a FEM suggests that there are differences in the spatial distribution of the elements that exceed a specific threshold based on shape but the overall volume of elements experiencing the specified magnitude was more dependent on the changes in the size of the model with little change due to shape.
- Published
- 2008
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24. Geometric scaling factors for the pediatric brainstem.
- Author
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Danelson KA, Yu M, Gayzik FS, Geer CP, Slice DE, and Stitzel JD
- Abstract
Injuries caused by motor vehicle crashes (MVCs) are the leading cause of death for children in the United States as well as the leading cause of head injury. Improved finite element models that integrate the correct shape of the pediatric brain with current injury prediction metrics would improve occupant response prediction for the pediatric occupant. The focus of this study is the improvement of geometric scaling factors for the brainstem to adapt current adult brain models to a pediatric model. The method used to assess shape change for this study was a geometric morphometric analysis technique. A sliding landmark form of a general Procrustes analysis was selected for its ability to compare curved structures with few true landmarks. The dataset consisted of fifty-nine individuals ranging in age from newborn to twenty-one years of age with groups specified at newborn, three months, six months, one year, three years, six years, ten years, fifteen years, and twenty-one years of age. Data was collected by outlining the structure on transverse and sagittal scans of magnetic resonance images and then creating a landmark dataset with a user-defined number of points for each individual. Once all individuals had the same number of landmarks, these points are allowed to slide on planes tangent to the surface until a value described as bending energy is minimized relative to an iteratively computed mean configuration from a Generalized Procrustes Analysis. A General Procrustes Analysis was completed for this data set to determine the shape differences between the age groups. Then, the coordinate locations were regressed onto age, and this analysis resulted in a model that predicted landmark locations based on age. From this model, the dimensions of the brainstem were calculated using the specified age groups. The final step was taking the dimensions of the predicted twenty-one year old model as the base and calculating a geometric scaling factor for shape, without including changes in size, for each age group. To assess the statistical significance of the process, permutation tests with 100,000 iterations were performed with resulting p-values of 0.17177 for a linear regression and 0.13467 for a quadratic regression of landmark location as a function of age.
- Published
- 2008
25. Aging and the shape of the mandible.
- Author
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Pessa JE, Slice DE, Hanz KR, Broadbent TH Jr, and Rohrich RJ
- Subjects
- Adolescent, Cross-Sectional Studies, Female, Humans, Longitudinal Studies, Male, Mandible diagnostic imaging, Middle Aged, Pilot Projects, Radiography, Aging physiology, Cephalometry, Mandible growth & development, Maxillofacial Development physiology
- Abstract
Background: The clinical observation has been made that the shape of the mandible changes with age in certain individuals. Because the shape and size of the mandible are so important to the human perception of youth, this observation was subjected to a pilot study., Methods: Longitudinal data available at the Bolton Brush Growth Study were evaluated. Only dentate individuals were included in the study. Serial frontal radiographs were analyzed from the same individual taken during youth and maturity for 16 individuals, eight female subjects and eight male subjects (n = 16). The mean age for youth was 16.2 years for female and male subjects. The mean age at maturity was 56.1 years for female subjects and 56.4 years for male subjects. Tracings were made of the mandibular border for each individual, at youth and at maturity. The only reliable way to analyze shape is the modern technique of geometric morphometric analysis, which was therefore used in this study. Other techniques, such as angular values and two-dimensional linear measurements, were dismissed because they have been shown to be unreliable for evaluating shape., Results: There was a statistically significant difference in shape for both male subjects and female subjects that occurred with age (p = 0.02 for female subjects and p = 0.001 for male subjects). The mandible continued to grow: the shape changed because some areas continued to grow faster than other areas. This is in accordance with the principle of differential growth of the facial skeleton., Conclusions: It is important for the cosmetic surgeon to evaluate the lower face before surgery and to understand that both bone and soft tissue can play a role in the appearance of the lower face in older individuals. A small lower face is highly attractive and conveys the impression of youth, and any soft-tissue procedure that can create the illusion of a diminutive lower face will improve the cosmetic result of the face lift procedure.
- Published
- 2008
- Full Text
- View/download PDF
26. Quantification of age-related shape change of the human rib cage through geometric morphometrics.
- Author
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Gayzik FS, Yu MM, Danelson KA, Slice DE, and Stitzel JD
- Subjects
- Adult, Aged, Humans, Male, Middle Aged, Radiography, Thoracic methods, Thorax anatomy & histology, Aging physiology, Imaging, Three-Dimensional methods, Models, Biological, Thorax physiology, Tomography, X-Ray Computed
- Abstract
The aim of this study is to quantify patterns of age-related shape change in the human thorax using Procrustes superimposition. Landmarks (n=106) selected from anonymized computed tomography (CT) scans of 63 adult males free of skeletal pathology were used to describe the form of the rib cage. Multivariate linear regression was used to determine a relationship between landmark location and age. Linear and quadratic models were also investigated. A permutation test employing 1 x 10(5) random trials was used to assess the model significance for both model formulations. Linear relationships between the centroid size (CS) of a landmark set and the corresponding individual's height, weight, and BMI were conducted to enable scaling of the dimensionless results from the Procrustes analysis. A significance level of alpha=0.05 was used for all tests. The average age of the study subjects was 57.0+/-17.3 years. Complete landmark sets were obtained from most of the scans (44 of 63). The quadratic relationship between the age and landmark location was found to be significant (p=0.037), thereby establishing a relationship between the age and thoracic shape change. The linear relationship was mildly significant as well (p=0.073). Significant relationships between the centroid size of the dataset and subject weight, height and BMI were determined, with the best-correlated value being weight (p=0.002, R(2)=0.22). Landmark datasets calculated using the quadratic model exhibited shape change consistent with the clinical observations (increasing kyphosis and rounding of the thoracic cage). Procrustes superimposition represents a potential improvement in the approach used to generate computational models for injury biomechanics studies. The coefficients from the quadratic model are provided and can be used to generate the complete set of model landmark data points at a given age.
- Published
- 2008
- Full Text
- View/download PDF
27. Analysis of pediatric head anthropometry using computed tomography for application to head injury prediction.
- Author
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Loftis KL, Geer CP, Danelson KA, Slice DE, and Stitze JD
- Subjects
- Adolescent, Anthropometry methods, Child, Computer Simulation, Female, Humans, Infant, Infant, Newborn, Male, Models, Biological, Radiographic Image Interpretation, Computer-Assisted methods, Aging physiology, Craniocerebral Trauma diagnostic imaging, Craniocerebral Trauma pathology, Head anatomy & histology, Head diagnostic imaging, Models, Anatomic, Tomography, X-Ray Computed methods
- Abstract
Motor vehicle accidents are the leading cause of death of people between one and thirty-four years of age in the U.S., and head trauma is a significant lethal injury in such cases. During a motor vehicle crash, the head often experiences blunt force trauma from impacts with seat backs, steering wheels, windows, and dashes. The resulting injuries can cause skull fractures, concussions, bleeding and swelling of the brain. Crash test dummies and finite element models are often used to study the nature and likelihood of injury during a crash, but these are currently based on scaled versions of a standard, 50th percentile male. This approach fails to accurately capture the size and shape variation in even the adult population, but may be especially inappropriate for modeling pediatric head injuries where, for instance, infants have fontanelles and reduced bone structure. In this presentation, an approach for modification of a finite element model of the human head based on 50th percentile male dimensions and representing the skull, brain, dura/CSF layer, and Falx Celebri, that will incorporate the anatomical and nonlinear morphological changes observed in pediatric skulls during ontogeny. Using 96 CT scans of normal pediatric skulls, landmark coordinate points are identified to map the changes in skull shape and size as aging occurs. The pediatric skull changes rapidly in size and shape during the first two years of age. Using this information, a pediatric finite element head model will be created, using parametric mesh generation software, to measure head injury in children in a motor vehicle crash.
- Published
- 2007
28. A finite element study of age-based size and shape variation of the human rib cage.
- Author
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Gayzik FS, Loftis KL, Slice DE, and Stitzel JD
- Subjects
- Adaptation, Physiological physiology, Adult, Aged, Anthropometry methods, Body Constitution physiology, Computer Simulation, Elasticity, Finite Element Analysis, Humans, Male, Middle Aged, Stress, Mechanical, Aging physiology, Models, Biological, Morphogenesis physiology, Ribs anatomy & histology, Ribs physiology, Thorax anatomy & histology, Thorax physiology
- Abstract
To fully understand the effects of aging on the integrity of the normal skeleton, detailed geometric models are needed to complement material property data. The purpose of this research is to develop a predictive model for age-related changes in rib-cage geometry using the generalized Procrustes approach, an advanced method of shape analysis. This predictive model is coupled with the finite element method to isolate the effects age-related size and shape change have on the structural response of the rib cage. Using a relatively small sample set (n = 12), trends in the age-related size and shape change of the human thorax consistent with clinical observations are identified. Finite element models constructed from landmark datasets generated via the generalized Procrustes approach demonstrate a decrease with age in the energy absorbing capacity of the thorax during a blunt impact.
- Published
- 2006
29. Comparison of relative mandibular growth vectors with high-resolution 3-dimensional imaging.
- Author
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Cevidanes LH, Franco AA, Gerig G, Proffit WR, Slice DE, Enlow DH, Lederman HM, Amorim L, Scanavini MA, and Vigorito JW
- Subjects
- Bone Remodeling physiology, Cephalometry methods, Child, Cranial Fossa, Middle anatomy & histology, Cranial Fossa, Middle growth & development, Dental Occlusion, Female, Follow-Up Studies, Humans, Image Processing, Computer-Assisted, Male, Mandible anatomy & histology, Mandibular Condyle anatomy & histology, Mandibular Condyle growth & development, Maxilla anatomy & histology, Maxilla growth & development, Prospective Studies, Puberty physiology, Sphenoid Bone anatomy & histology, Sphenoid Bone growth & development, Vertical Dimension, Imaging, Three-Dimensional methods, Magnetic Resonance Imaging methods, Malocclusion, Angle Class II therapy, Mandible growth & development, Orthodontic Appliances, Functional
- Abstract
Introduction: The mandibular rami and their endochondrally growing condyles develop in many directions relative to the variable anatomic patterns of the nasomaxilla and middle cranial fossae during growth and response to orthopedic treatment., Methods: High-resolution magnetic resonance images were used to compare 3-dimensional (3D) growth vectors of skeletal displacement and bone remodeling in 25 untreated subjects with Class II malocclusions, 28 subjects with Class II malocclusions who were treated with Fränkel appliance therapy, and 25 subjects with normal occlusions. Marked differences were noted over an 18-month observation period. The 3D coordinates of anatomic landmarks were registered by Procrustes fit to control for rotation, translation, and scale differences., Results: Compared with untreated Class II and normal-occlusion subjects, the treated group showed highly significant differences in the 3D displacement/remodeling vectors of gonion and pterygomaxillary fissure relative to condylion and middle cranial fossae bilateral skeletal landmarks, by using both permutation tests ( P < .001) and a general linear multivariate model ( P < .0001)., Conclusions: In a prospective and systematically controlled study, we quantitatively described significant 3D rami skeletal compensations in the structural assembly of facial morphogenesis at the beginning of the adolescent growth spurt using novel modeling techniques. These techniques have facilitated quantification of relative 3D growth vectors to illustrate skeletal changes with Fränkel appliance therapy. Future studies are required to assess the long-term clinical significance of our findings.
- Published
- 2005
- Full Text
- View/download PDF
30. Assessment of mandibular growth and response to orthopedic treatment with 3-dimensional magnetic resonance images.
- Author
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Cevidanes LH, Franco AA, Gerig G, Proffit WR, Slice DE, Enlow DH, Yamashita HK, Kim YJ, Scanavini MA, and Vigorito JW
- Subjects
- Cephalometry methods, Child, Cranial Fossa, Middle anatomy & histology, Cranial Fossa, Middle growth & development, Dental Occlusion, Female, Follow-Up Studies, Humans, Image Processing, Computer-Assisted, Male, Mandible anatomy & histology, Mandibular Advancement instrumentation, Mandibular Condyle anatomy & histology, Mandibular Condyle growth & development, Maxilla anatomy & histology, Maxilla growth & development, Prospective Studies, Puberty physiology, Sphenoid Bone anatomy & histology, Sphenoid Bone growth & development, Vertical Dimension, Imaging, Three-Dimensional methods, Magnetic Resonance Imaging methods, Malocclusion, Angle Class II therapy, Mandible growth & development, Orthodontic Appliances, Functional
- Abstract
Introduction: Three-dimensional (3D) craniofacial images are commonly used in clinical studies in orthodontics to study developmental and morphologic relationships., Methods: We used 3D magnetic resonance imaging to study relationships among craniofacial components during the pubertal growth spurt and in response to Fränkel appliance therapy. The sample for this prospective study was 156 high-resolution magnetic resonance images with 1 mm isotropic voxel resolution of 78 subjects taken initially (T1) and 18 +/- 1 months (T2) after treatment or an observation period. The subjects were Brazilian children; 28 were treated and 25 were untreated for Class II malocclusion, and 25 were untreated with normal occlusions. A Procrustes geometric transformation of 3D skeletal landmarks was used to assess growth or treatment alterations from T1 to T2. The landmarks were located on the mandibular rami and the other craniofacial parts specifically related to the mandibular growth (the middle cranial fossae and the posterior part of the bilateral nasomaxilla). This allowed visualization of the entire volumetric dataset with an interactive 3D display., Results: Statistically significant differences were found in the relative 3D skeletal growth directions from T1 to T2 for treated vs untreated Class II children (Bonferroni-adjusted P < .001) and for treated Class II vs normal-occlusion subjects ( P < .001). The major differences in the treated group were increased mandibular rami vertical dimensions and more forward rami relative to the posterior nasomaxilla and the middle cranial fossae. Principal component analysis made it possible to show individual variability and group differences in the principal dimensions of skeletal change., Conclusions: These methods are generalizable to other imaging techniques and 3D samples, and significantly enhance the potential of systematically controlled data collection and analysis of bony structures in 3 dimensions for quantitative assessment of patient parameters in craniofacial biology.
- Published
- 2005
- Full Text
- View/download PDF
31. Modeling masticatory muscle force in finite element analysis: sensitivity analysis using principal coordinates analysis.
- Author
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Ross CF, Patel BA, Slice DE, Strait DS, Dechow PC, Richmond BG, and Spencer MA
- Subjects
- Animals, Biomechanical Phenomena, Bite Force, Body Patterning, Electromyography, Female, Macaca anatomy & histology, Male, Muscle, Skeletal anatomy & histology, Sensitivity and Specificity, Skull anatomy & histology, Skull physiology, Species Specificity, Finite Element Analysis, Macaca physiology, Mastication physiology, Models, Biological, Muscle, Skeletal physiology, Principal Component Analysis methods
- Abstract
Our work on a finite element model of the skull of Macaca aims to investigate the functional significance of specific features of primate skulls and to determine to which of the input variables (elastic properties, muscle forces) the model behavior is most sensitive. Estimates of muscle forces acting on the model are derived from estimates of physiological cross-sectional areas (PCSAs) of the jaw muscles scaled by relative electromyographic (EMG) amplitudes recorded in vivo. In this study, the behavior of the model was measured under different assumptions regarding the PCSAs of the jaw muscles and the latency between EMG activity in those muscles and the resulting force production. Thirty-six different loading regimes were applied to the model using four different PCSA sets and nine different PCSA scaling parameters. The four PCSA sets were derived from three different macaque species and one genus average, and the scaling parameters were either EMGs from 10, 20, 30, 40, 50 and 60 msec prior to peak bite force, or simply 100%, 50%, or 25% of peak muscle force. Principal coordinates analysis was used to compare the deformations of the model produced by the 36 loading regimes. Strain data from selected sites on the model were also compared with in vivo bone strain data. The results revealed that when varying the external muscle forces within these boundaries, the majority of the variation in model behavior is attributable to variation in the overall magnitude rather than the relative amount of muscle force generated by each muscle. Once this magnitude-related variation in model deformation was accounted for, significant variation was attributable to differences in relative muscle recruitment between working and balancing sides. Strain orientations at selected sites showed little variation across loading experiments compared with variation documented in vivo. These data suggest that in order to create an accurate and valid finite element model of the behavior of the primate skull at a particular instant during feeding, it is important to include estimates of the relative recruitment levels of the masticatory muscles. However, a lot can be learned about patterns of skull deformation, in fossil species for example, by applying external forces proportional to the estimated relative PCSAs of the jaw adductors.
- Published
- 2005
- Full Text
- View/download PDF
32. Population affinities of 19th Century Cuban crania: implications for identification criteria in South Florida Cuban Americans.
- Author
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Ross AH, Slice DE, Ubelaker DH, and Falsetti AB
- Subjects
- Cuba ethnology, Female, Florida epidemiology, Humans, Image Processing, Computer-Assisted, Male, Multivariate Analysis, Anthropology, Physical, Cephalometry methods, Forensic Anthropology methods, Hispanic or Latino ethnology
- Abstract
Identification criteria, specifically discriminant function formulae derived from traditional craniometrics, currently used in South Florida for Cuban Americans and other "Hispanic" groups, are unsuitable to provide adequate biological profiles due to complex biological histories as well as widely diverse geographic origins. Florida's total population is approximately 16 million (15,982,378) individuals. Of the total population 2.682,715, or 16.8%, are self-identified as "Hispanic". South Florida (herein defined as Miami-Dade, Broward and Collier Counties) is home to 60% of the total Hispanic population of Florida with 1,291,737 (48.15%) residing in Miami-Dade County. The Hispanic population of Miami-Dade County makes up 57.0% of the total population of 2,253,362. Each recognized sub-group of Hispanics (Mexican, Puerto Rican, and Cuban) includes its own geographic point-of-origin and population history. Cuban-Americans (arriving in the late 1950's and early 1960's) make up the largest sub-population of Florida's Hispanics in any county and in Miami-Dade number 650,601 or 51% of the total Latin population. Additionally, as in other agricultural states, Florida has a very large population of undocumented workers who primarily arrive from Texas and points south of the Straits of Florida. Thus the application of the available traditional craniometric and non-metric methods are not appropriate for South Florida's Latin population. To begin to address this issue in relation to South Florida's Cuban population, we present an analysis of cranio-facial shape variation in a 19th Century Cuban sample, 17th Century Spanish sample, a Precontact Cuban sample, and Terry Blacks using geometric morphometric methods. Significant biological shape differences and patterns of variation are observed among the groups. These results provide us with a context in which to begin to understand the biological variation of Cuban Americans, which will enable the development of identification criteria specific for this U.S. hybrid Hispanic community.
- Published
- 2004
33. Anthropology takes control of morphometrics.
- Author
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Bookstein FL, Slice DE, Gunz P, and Mitteroecker P
- Subjects
- Animals, Hominidae anatomy & histology, Humans, Least-Squares Analysis, Multivariate Analysis, Anthropology, Physical methods, Anthropometry methods, Models, Biological
- Abstract
There has been a startling change over the last decade in the intellectual context of morphometrics. In the 1990's, this field, which has not altered its focus upon the quantitative analysis of biomedical shape variation and shape change, was principally centered around concerns of medical image analysis; but now it is driven mainly by the demands of researchers in human variability, physical anthropology, primatology, and paleoanthropology instead. This essay celebrates that change and tries to account for it by reference to cognitive and intellectual aspects of the new home.
- Published
- 2004
34. Landmark coordinates aligned by procrustes analysis do not lie in Kendall's shape space.
- Author
-
Slice DE
- Subjects
- Biological Evolution, Ecology, Mathematics, Biometry, Phylogeny
- Published
- 2001
- Full Text
- View/download PDF
35. A geometric morphometric assessment of change in midline brain structural shape following a first episode of schizophrenia.
- Author
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Gharaibeh WS, Rohlf FJ, Slice DE, and DeLisi LE
- Subjects
- Adult, Age of Onset, Brain pathology, Female, Follow-Up Studies, Humans, Image Processing, Computer-Assisted, Magnetic Resonance Imaging, Male, Psychiatric Status Rating Scales, Sex Characteristics, Mesencephalon pathology, Schizophrenia pathology
- Abstract
Background: Previous reports indicate that brain structural abnormalities may be progressive in some patients with schizophrenia. Our study was designed to determine deviations in the shape of midline brain structures at the time of onset of symptoms of schizophrenia and 3-5 years later., Methods: Eleven landmarks were located on the midsagittal magnetic resonance imagery brain scans of 55 patients with schizophrenia and 22 nonpsychiatric control individuals. Geometric morphometric methods were used for the extraction of shape variables from landmark coordinates. Permutation tests were used to test the effects of gender, diagnosis, time elapsed since illness onset, and age on brain shape., Results: The diagnosis-by-time interaction and the effect of gender were significantly different from zero (p<.027 and p <.039, respectively). The effect of time was significant in patients (p <.002), but not in control subjects. Some anatomical abnormalities in mean patient brain morphology seem to be present both at the time of diagnosis and at follow-up. These are similar to anomalies reported by previous geometric morphometrics studies., Conclusions: Some previously identified brain abnormalities are detectable at the time of first hospitalization. The rapid change in midline brain morphology in patients with schizophrenia during the subsequent 3-5 years is consistent with either a neurodegenerative disease process or an effect of treatment with psychiatric drugs. There is a sexual dimorphism in brain morphology that might be reduced by schizophrenia.
- Published
- 2000
- Full Text
- View/download PDF
36. Comparing frontal cranial profiles in archaic and modern homo by morphometric analysis.
- Author
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Bookstein F, Schäfer K, Prossinger H, Seidler H, Fieder M, Stringer C, Weber GW, Arsuaga JL, Slice DE, Rohlf FJ, Recheis W, Mariam AJ, and Marcus LF
- Subjects
- Humans, Biometry methods, Frontal Bone anatomy & histology
- Abstract
Archaic and modern human frontal bones are known to be quite distinct externally, by both conventional visual and metric evaluation. Internally this area of the skull has been considerably less well-studied. Here we present results from a comparison of interior, as well as exterior, frontal bone profiles from CT scans of five mid-Pleistocene and Neanderthal crania and 16 modern humans. Analysis was by a new morphometric method, Procrustes analysis of semi-landmarks, that permits the statistical comparison of curves between landmarks. As expected, we found substantial external differences between archaic and modern samples, differences that are mainly confined to the region around the brow ridge. However, in the inner median-sagittal profile, the shape remained remarkably stable over all 21 specimens. This implies that no significant alteration in this region has taken place over a period of a half-million years or more of evolution, even as considerable external change occurred within the hominid clade spanning several species. This confirms that the forms of the inner and outer aspects of the human frontal bone are determined by entirely independent factors, and further indicates unexpected stability in anterior brain morphology over the period during which modern human cognitive capacities emerged. Anat Rec (New Anat): 257:217-224, 1999., (Copyright 1999 Wiley-Liss, Inc.)
- Published
- 1999
- Full Text
- View/download PDF
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