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Photoreceptors in the mammalian retina convert light signals into electrical and molecular signals through phototransduction and transfer the visual inputs to second-order neurons via specialized ribbon synapses. Two kinds of photoreceptors, rods and cones, possess distinct morphology and function. Currently, we have limited knowledge about rod versus (vs.) cone synapse development and the associated genes. The transcription factor neural retina leucine zipper (NRL) determines the rod vs. cone photoreceptor cell fate and is critical for rod differentiation. Nrl knockout mice fail to form rods, generating all cone or S-cone-like (SCL) photoreceptors in the retina, whereas ectopic expression of Nrl using a cone-rod homeobox (Crx) promoter (CrxpNrl) forms all rods. Here, we examined rod and cone pre-synapse development, including axonal elongation, terminal shaping, and synaptic lamination in the outer plexiform layer (OPL) in the presence or absence of Nrl. We show that NRL loss and knockdown result in delayed OPL maturation and plasticity with aberrant dendrites of bipolar neurons. The integrated analyses of the transcriptome in developing rods and SCLs with NRL CUT&RUN and synaptic gene ontology analyses identified G protein subunit beta (Gnb) 1 and p21 (RAC1) activated kinase 5 (Pak5 or Pak7) transcripts were upregulated in developing rods and down-regulated in developing SCLs. Notably, Gnb1 and Gnb5 are rod dominant, and Gnb3 is enriched in cones. NRL binds to the genes of Gnb1, Gnb3, and Gnb5. NRL also regulates pre-synapse ribbon genes, and their expression is altered in rods and SCLs. Our study of histological and gene analyses provides new insights into the morphogenesis of photoreceptor pre-synapse development and regulation of associated genes in the developing retina. [ABSTRACT FROM AUTHOR]

Coccidioides immitis and posadasii are closely related fungal species that cause coccidioidomycosis. These dimorphic organisms cause disease in immunocompetent as well as immunocompromised individuals and as much as 40% of the population is infected in the endemic area. Although most infections resolve spontaneously, the infection can be prolonged and, in some instances, fatal. Coccidioides has been studied for more than 100 years and many aspects of the organism and the disease it causes have been investigated. There are over 500 manuscripts concerning Coccidioides (excluding clinical articles) referenced in PubMed over the past 50 years, so there is a large body of evidence to review. We reviewed the most accurate and informative basic research studies of these fungi including some seminal older studies as well as an extensive review of current research. This is an attempt to gather the most important basic research studies about this fungus into one publication. To focus this review, we will discuss the mycology of the organism exclusively rather than the studies of the host response or clinical studies. We hope that this review will be a useful resource to those interested in Coccidioides and coccidioidomycosis.

Coccidioides immitis and C. posadasii are dimorphic fungi that transform from mycelia with internal arthroconidia in the soil to a tissue form known as a spherule in mammals. This process can be recapitulated in vitro by increasing the temperature, CO2 and changing other culture conditions. In this study, we have analyzed changes in gene expression in mycelia and young and mature spherules. Genes that were highly upregulated in young spherules include a spherule surface protein and iron and copper membrane transporters. Genes that are unique to Coccidioides spp. are also overrepresented in this group, suggesting that they may be important for spherule differentiation. Enriched GO terms in young spherule upregulated genes include oxidation-reduction, response to stress and membrane proteins. Downregulated genes are enriched for transcription factors, especially helix-loop-helix and C2H2 type zinc finger domain-containing proteins, which is consistent with the dramatic change in transcriptional profile. Almost all genes that are upregulated in young spherules remain upregulated in mature spherules, but a small number of genes are differentially expressed in those two stages of spherule development. Mature spherules express more Hsp31 and amylase and less tyrosinase than young spherules. Some expression of transposons was detected and most of the differentially expressed transposons were upregulated in spherules.

Attachment of a detached retina does not always restore vision to pre-injury levels, even if the attachment is anatomically successful. The problem is due in part to long-term damage to photoreceptor synapses. Previously, we reported on damage to rod synapses and synaptic protection using a Rho kinase (ROCK) inhibitor (AR13503) after retinal detachment (RD). This report documents the effects of detachment, reattachment, and protection by ROCK inhibition on cone synapses. Conventional confocal and stimulated emission depletion (STED) microscopy were used for morphological assessment and electroretinograms for functional analysis of an adult pig model of RD. RDs were examined 2 and 4 h after injury or two days later when spontaneous reattachment had occurred. Cone pedicles respond differently than rod spherules. They lose their synaptic ribbons, reduce invaginations, and change their shape. ROCK inhibition protects against these structural abnormalities whether the inhibitor is applied immediately or 2 h after the RD. Functional restoration of the photopic b-wave, indicating cone-bipolar neurotransmission, is also improved with ROCK inhibition. Successful protection of both rod and cone synapses with AR13503 suggests this drug will (1) be a useful adjunct to subretinal administration of gene or stem cell therapies and (2) improve recovery of the injured retina when treatment is delayed. [ABSTRACT FROM AUTHOR]

Microplastics (MPs) are pervasive contaminants with unclear toxicological impacts. Current research on MP pollution relies on low-throughput methodologies, which are time-consuming and cannot directly measure MP concentration in suspensions. This study presents a qualitative and quantitative flow cytometry-based method for analysing MPs in water, offering a faster and more sustainable alternative. The method involves density separation to remove interfering particles, UV irradiation to eliminate microorganisms, and filtration to remove particles above 100 µm. The sensitivity of the method for different types of MPs, such as polystyrene (PS), polypropylene (PP), polyvinyl chloride (PVC), polyethylene terephthalate (PET), and polyamide (PA) microbeads, ranges from 2 µg/L to 1 mg/L. For these MPs, good linearity was found in matrix-matched calibration where the most concentrated standard was 5 mg/L (R2 0.9820–0.9989) although the linear range can be larger (e.g. 42 mg MP/L for PS microbeads). The repeatability and reproducibility of the method for the model PS MP were

Coccidioides immitis and C. posadasii are two highly pathogenic dimorphic fungal species that are endemic in the arid areas of the new world, including the region from west Texas to southern and central California in the USA that cause coccidioidomycosis (also known as Valley Fever). In highly endemic regions such as southern Arizona, up to 50% of long term residents have been infected. New information about fungal population genetics, ecology, epidemiology, and host-pathogen interactions is becoming available. However, our understanding of some aspects of coccidioidomycosis is still incomplete, including the extent of genetic variability of the fungus, the genes involved in virulence, and how the changes in gene expression during the organism's dimorphic life cycle are related to the transformation from a free-living mold to a parasitic spherule. Unfortunately, efforts to develop an effective subunit vaccine have not yet been productive, although two potential live fungus vaccines have been developed.

Abstract Objective Orchids seeds are so small, lacking nutrients and barely germinate in natural condition. For germinating in natural conditions, should associatie with fungi, especially mycorrhizal fungi. Drawing on the tissue culture technique and meeting all necessary growth and development conditions, the limitations can be overcome. Materials and Methods After being surfaced cleaned, the capsules containing seeds were placed in 1% Teepol solution as a disinfectant and wetting agent for 20 minutes to completely remove pathogens; then were washed and placed under laminar air flow, disinfected with HgCl2 0.2 for 10 minutes, Bavistin and Streptomycin each one 0.03% for 5 minutes in a entirely sterile environment. All the culture media were simultaneously ready and the seeds were uniformly inoculated in a totally sterilized environment and incubated. Results The percentage and germination rate were affected by seed age and plant growth regulators. The formation of spherule and chlorophyll synthesis were highest in the third stage of seed culture. Based on the type of treatment, the formation, development and differentiation of protocorm were observed between 43-76 days after culture, which was statistically significant at 1% compared to control. Conclusions Considering the data analysis results, the success rate from the germination stage to the differentiation of protocorm in orchid seeds is mostly different based on seed age in each spices and cultivars, the type of plant growth regulators used, The ratio and composition of the two types of auxin and the ratio of auxin to cytokinin and vice versa are different. Therefore, it is necessary that new complementary experiments be done for each spices and cultivars based on the difference in the time taken from pollination to embryo ripening.

Copyright of Journal of Plant Protection & Pathology is the property of Egyptian National Agricultural Library (ENAL) and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Coccidioides immitis and C. posadasii are dimorphic fungi that transform from mycelia with internal arthroconidia in the soil to a tissue form known as a spherule in mammals. This process can be recapitulated in vitro by increasing the temperature, CO2 and changing other culture conditions. In this study, we have analyzed changes in gene expression in mycelia and young and mature spherules. Genes that were highly upregulated in young spherules include a spherule surface protein and iron and copper membrane transporters. Genes that are unique to Coccidioides spp. are also overrepresented in this group, suggesting that they may be important for spherule differentiation. Enriched GO terms in young spherule upregulated genes include oxidation-reduction, response to stress and membrane proteins. Downregulated genes are enriched for transcription factors, especially helix–loop–helix and C2H2 type zinc finger domain-containing proteins, which is consistent with the dramatic change in transcriptional profile. Almost all genes that are upregulated in young spherules remain upregulated in mature spherules, but a small number of genes are differentially expressed in those two stages of spherule development. Mature spherules express more Hsp31 and amylase and less tyrosinase than young spherules. Some expression of transposons was detected and most of the differentially expressed transposons were upregulated in spherules. [ABSTRACT FROM AUTHOR]

Coccidioides immitis and C. posadasii are two highly pathogenic dimorphic fungal species that are endemic in the arid areas of the new world, including the region from west Texas to southern and central California in the USA that cause coccidioidomycosis (also known as Valley Fever). In highly endemic regions such as southern Arizona, up to 50% of long term residents have been infected. New information about fungal population genetics, ecology, epidemiology, and host-pathogen interactions is becoming available. However, our understanding of some aspects of coccidioidomycosis is still incomplete, including the extent of genetic variability of the fungus, the genes involved in virulence, and how the changes in gene expression during the organism’s dimorphic life cycle are related to the transformation from a free-living mold to a parasitic spherule. Unfortunately, efforts to develop an effective subunit vaccine have not yet been productive, although two potential live fungus vaccines have been developed.

Alphavirus genome replication is carried out by the viral replication complex inside modified membrane structures called spherules. The viral nonstructural protein 1 (nsP1) is the only membrane-associated protein that anchors the replication complex to the cellular membranes. Although an internal amphipathic helix of nsP1 is critical for membrane association, the mechanism of nsP1 interaction with membranes and subsequent membrane reorganization is not well understood. We studied the membrane interaction of chikungunya virus (CHIKV) nsP1 and show that both the CHIKV nsP1 protein and the amphipathic peptide specifically bind to negatively charged phospholipid vesicles. Using cryo-electron microscopy, we further show that nsP1 forms a contiguous coat on lipid vesicles and induces structural reorganization, while the amphipathic peptide alone failed to deform the membrane bilayer. This suggests that although amphipathic helix of nsP1 is required for initial membrane binding, the remaining cytoplasmic domain of nsP1 is involved in the subsequent membrane reorganization. [ABSTRACT FROM AUTHOR]

Alphaviruses are arthropod-borne viruses mainly transmitted by hematophagous insects that cause moderate to fatal disease in humans and other animals. Currently, there are no approved vaccines or antivirals to mitigate alphavirus infections. In this review, we summarize the current knowledge of alphavirus-induced structures and their functions in infected cells. Throughout their lifecycle, alphaviruses induce several structural modifications, including replication spherules, type I and type II cytopathic vacuoles, and filopodial extensions. Type I cytopathic vacuoles are replication-induced structures containing replication spherules that are sites of RNA replication on the endosomal and lysosomal limiting membrane. Type II cytopathic vacuoles are assembly induced structures that originate from the Golgi apparatus. Filopodial extensions are induced at the plasma membrane and are involved in budding and cell-to-cell transport of virions. This review provides an overview of the viral and host factors involved in the biogenesis and function of these virus-induced structures. Understanding virus–host interactions in infected cells will lead to the identification of new targets for antiviral discovery.

Background: Distinctive rounded structures termed spherules have been observed in thyroid fine‐needle aspiration (FNA) samples. Although they are often small and interpreted as microfollicles, spherules are notable for the even spacing of the follicular cells along the perimeter of the structure. Because they have an orderly architectural arrangement, it has been hypothesized that spherules are benign and do not carry the same risk of malignancy that traditional microfollicles do. The aim of this study was to identify the clinical significance and histopathologic correlate of spherules. Methods: Thyroid FNAs (n = 637) with an interpretation of atypia of undetermined significance (AUS) were reviewed for the presence of spherules, which were defined as small follicles with a rounded, smooth, sharply defined outer contour, evenly spaced nuclei, and a 3‐dimensional appearance. Cases were included if spherules accounted for >50% of follicular cell arrangements. Clinical, histopathologic, molecular, and sonographic follow‐up data were obtained. Results: Twenty‐five spherule cases were identified, and they represented 3.9% of all AUS cases reviewed. All 24 cases with follow‐up had a benign outcome. Eleven were tested with the Afirma gene expression classifier; 8 were benign according to the gene expression classifier, and 3 were suspicious but histologically benign after surgical resection. Four additional cases were histologically benign after surgery. Five patients had repeat benign cytology. Four patients had repeat stable ultrasound findings. Conclusions: Thyroid nodules diagnosed as AUS, if composed predominantly of spherules, are associated with a benign outcome. Recognizing this distinctive cytomorphologic finding may help to reduce the number of FNAs interpreted as AUS and save patients from unnecessary additional testing and surgery. Distinctive rounded structures termed spherules, which are often interpreted as microfollicles, have been observed in thyroid fine‐needle aspiration samples. Thyroid nodules that are composed predominantly of spherules, however, are associated with a benign outcome. Recognizing this distinctive cytomorphology as a benign finding may save patients from unnecessary additional testing and surgery. [ABSTRACT FROM AUTHOR]

Coccidioides immitis and C. posadasii are two highly pathogenic dimorphic fungal species that are endemic in the arid areas of the new world, including the region from west Texas to southern and central California in the USA that cause coccidioidomycosis (also known as Valley Fever). In highly endemic regions such as southern Arizona, up to 50% of long term residents have been infected. New information about fungal population genetics, ecology, epidemiology, and host-pathogen interactions is becoming available. However, our understanding of some aspects of coccidioidomycosis is still incomplete, including the extent of genetic variability of the fungus, the genes involved in virulence, and how the changes in gene expression during the organism's dimorphic life cycle are related to the transformation from a free-living mold to a parasitic spherule. Unfortunately, efforts to develop an effective subunit vaccine have not yet been productive, although two potential live fungus vaccines have been developed. [ABSTRACT FROM AUTHOR]

Thirty-eight spherules from the Antarctic ice sheet were analyzed using neutron activation analysis under two different conditions to investigate their origin. In almost all of these spherules, the contents of iron, cobalt, and manganese were determined to be 31% to 88%, 17 mg/kg to 810 mg/kg, and 0.017% to 7%, respectively. A detectable iridium content of 0.84 mg/kg was found in only one spherule, which was judged to be extraterrestrial in origin. A comparison of elemental compositions of the Antarctic spherules analyzed in this study with those of deep-sea sediment spherules and those of terrestrial materials revealed that most of the Antarctic spherules except for the sample in which iridium was detected could not be identified as extraterrestrial in origin.

Porcine deltacoronavirus (PDCoV) was first identified in Hong Kong in 2012 from samples taken from pigs in 2009. PDCoV was subsequently identified in the USA in 2014 in pigs with a history of severe diarrhea. The virus has now been detected in pigs in several countries around the world. Following the development of tissue culture adapted strains of PDCoV, it is now possible to address questions regarding virus−host cell interactions for this genera of coronavirus. Here, we presented a detailed study of PDCoV-induced replication organelles. All positive-strand RNA viruses induce the rearrangement of cellular membranes during virus replication to support viral RNA synthesis, forming the replication organelle. Replication organelles for the Alpha-, Beta-, and Gammacoronavirus genera have been characterized. All coronavirus genera induced the formation of double-membrane vesicles (DMVs). In addition, Alpha- and Betacoronaviruses induce the formation of convoluted membranes, while Gammacoronaviruses induce the formation of zippered endoplasmic reticulum (ER) with tethered double-membrane spherules. However, the structures induced by Deltacoronaviruses, particularly the presence of convoluted membranes or double-membrane spherules, are unknown. Initially, the dynamics of PDCoV strain OH-FD22 replication were assessed with the onset of viral RNA synthesis, protein synthesis, and progeny particle release determined. Subsequently, virus-induced membrane rearrangements were identified in infected cells by electron microscopy. As has been observed for all other coronaviruses studied to date, PDCoV replication was found to induce the formation of double-membrane vesicles. Significantly, however, PDCoV replication was also found to induce the formation of regions of zippered endoplasmic reticulum, small associated tethered vesicles, and double-membrane spherules. These structures strongly resemble the replication organelle induced by avian Gammacoronavirus infectious bronchitis virus.

Carbon spherules from ginkgo seed starch were prepared through stabilization and carbonization processes. The ginkgo seed starch was first stabilized at 195 ° C for 18 h, then carbonized at 500 °C for 2 h under an N2 atmosphere. The characterization results confirmed that carbon spherules were in the size range of 10-20 µm. Experimental data were also evaluated to find out the kinetic characteristics of phenols on the carbon spherules during the adsorption process. Adsorption processes for phenol, β-nitrophenol and β-chlorophenol were found to follow the pseudo-first order kinetic model with R² values of 0.995,0.997 and 0.998, while the rate constants k1 = 0.014, 0.009 and 0.011 min-1 showed that the adsorption is mainly controlled by adsorbate diffusion. The equilibrium data were analyzed with the Langmuir, Freundlich and Temkin-Pyzhev models and the best fit was observed with the Freundlich isotherm, suggesting the physical adsorption of phenols. From the thermodynamic functions, AG, ΔH, and ΔS were calculated, which showed that adsorption is more favorable at low temperature and is an exothermic process, and the adsorption of β-nitrophenol and β-chlorophenol were more advantageous than that of phenol. [ABSTRACT FROM AUTHOR]

The South Atlantic Aptian ‘Pre-salt’ reservoirs are formed by a combination of spherulitic carbonates and Mg-rich clays accumulated in volcanic alkaline lake settings with exotic chemistries. So far, outcrop analogues characterised by metre-thick successions deposited in lacustrine scenarios are elusive so disentangling the genesis of spherulitic carbonates represents a major scientific challenge with business impact. In particular the controls on spatial distribution and the environment of spherulitic facies formation remain poorly constrained, little studied, and hotly debated. To shed light on this conundrum, a spherulitic carbonate-rich, alkaline volcanic lacustrine succession has been analysed at outcrop scale: the Carboniferous East Kirkton Limestone (Scotland). Despite clays being very scarce and limited to layers of amorphous Mg-Si minerals, a diverse array of spherulitic calcitic components were formed, including coated grains, crusts, and build-ups. This setting enables the mechanisms of spherulitic calcite development and the patterns of sediment accumulation to be explored in a geobiological and hydrochemical scenario similar to the ‘Pre-Salt’ subsurface occurrences but divorced from clay influence. The integration of logs, borehole data, outcrop photomosaics and petrographic observations collectively allowed the reconstruction of a depositional model for the East Kirkton lacustrine succession. In this model, calcite spherule nucleation took place at the sediment-water interface in the littoral zone, driven by the co-occurrence of 1) high alkalinity, 2) Ca-Mg rich hydrochemistry, and 3) microbial-derived colloidal exopolymeric substances. These environmental conditions permitted the coeval development of spherulitic cementstone build-ups and spherulitic grainstone-packstone within the wave-agitated zone, and the accumulation of floatstones and laminites of spherulitic grains in deeper lake regions by means of downslope reworking. This model is consistent with the previously documented microbial bloom occurrences and highlights the need to better understand the complex ‘microbe-solution’ interactions before any reliable facies model is envisaged. [ABSTRACT FROM AUTHOR]

Copyright of Journal of Plant Protection & Pathology is the property of Egyptian National Agricultural Library (ENAL) and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Photoreceptor synaptic terminals are responsible for transmitting visual information to downstream neurons. In vertebrate retinas, photoreceptor synaptic terminals are of different sizes and structures. The molecular mechanisms that underlie photoreceptor synaptic development are not clearly understood. Here, we have systematically examined the size variations in the synaptic terminals of cone and rod photoreceptors in the adult zebrafish retina. We reveal that the average cone pedicle sizes expand in the order of UV, blue, green, and red cones, echoing the increasing maximally sensitive wavelengths of the opsins expressed in the corresponding cone types. In addition, rod spherules are smaller than all cone pedicles. The terminals of each photoreceptor type also display distinct regional variations across the retina and between males and females. These findings establish the basis for using the zebrafish retina to study the molecular mechanisms that regulate the sizes and structures of photoreceptor terminals for proper visual functions. • The average sizes of pedicles increase in the order of UV, blue, green, and red cones. • Rod spherules are smaller than the pedicles of all types of cones. • Sex-dependent differences exist in photoreceptor terminal sizes. • Photoreceptor terminal sizes also display regional variations across the retina. [ABSTRACT FROM AUTHOR]

In order to understand the response of authigenic pyrite to gas hydrate geo-systems, pyrite tubes or rods at the sulfate-methane transition (SMT) zone of core GC10 from the northern continental slope of the South China Sea (SCS) were investigated. In situ X-ray diffraction (XRD) results show that the pyrite tube consists of pyrite micro-crystals with trace amount of graphite in the inner tube. Scanning electron microscope (SEM) observations of pyrite tubes indicate various aggregations in the form of framboidal, euhedral, and colloidal pyrite microcrystals. Typical framboidal pyrite is considered as packing of octahedral microcrystals. Interestingly, many framboids in the tubes consist of round or irregular microcrystals and have an outer crust that consists of secondary pyrite. The size of the framboids in the inner wall of the tube is larger than that in the middle wall or foraminifer-filled pyrite. High-resolution transmission electron microscopic (HRTEM) images show marcasite lamellae defects in the spherulitic pyrite crystals, which reveal different solution conditions during the pyrite precipitation. Nano-foil-like graphitic carbon was observed to be closely associated with the pyrite spherules. The occurrence of both marcasite layers and nano-foil-like graphitic carbon suggest that the migration of methane from deep sediment. It is suggested that the formation of pyrite serves as a catalyst during the reaction from methane to elemental carbon under the anaerobic oxidation of methane. Meanwhile, this reaction results in local acidification of the solution inside the pyrite tubes, which favors marcasite lamellae growth on the host pyrite substrate. [ABSTRACT FROM AUTHOR]

This study explores the petrogenesis of Shişr 161, an immature lunar regolith breccia meteorite with low abundances of incompatible elements, a feldspathic affinity, and a significant magnesian component. Our approach was to identify all clasts >0.5 mm in size in a thin section, characterize their mineral and melt components, and reconstruct their bulk major and minor element compositions. Trace element concentrations in representative clasts of different textural and compositional types indicate that the clast inventory of Shişr 161 is dominated by impact melts that include slowly cooled cumulate melt rocks with mafic magnesian mineral assemblages. Minor exotic components are incompatible-element-rich melt spherules and glass fragments, and a gas-associated spheroidal precipitate. Our hypothesis for the petrologic setting of Shişr 161 is that the crystallized melt clasts originate from the upper ~1 km of the melt sheet of a 300 to 500 km diameter lunar impact basin in the Moon's feldspathic highlands. This hypothesis is based on size requirements for cumulate impact melts and the incorporation of magnesian components that we interpret to be mantle-derived. The glassy melts likely formed during the excavation of the melt sheet assemblage, by an impact that produced a >15 km diameter crater. The assembly of Shişr 161 occurred in a proximal ejecta deposit of this excavation event. A later impact into this ejecta deposit then launched Shişr 161 from the Moon. Our geochemical modeling of remote sensing data combined with the petrographic and chemical characterization of Shişr 161 reveals a preferred provenance on the Moon's surface that is close to pre-Nectarian Riemann-Fabry basin. [ABSTRACT FROM AUTHOR]

ABSTRACT The Down syndrome cell adhesion molecule (DSCAM) is required for regulation of cell number, soma spacing, and cell type-specific dendrite avoidance in many types of retinal ganglion and amacrine cells. In this study we assay the organization of cells making up the outer plexiform layer of the retina in the absence of Dscam. Some types of OFF bipolar cells, type 3b and type 4 bipolar cells, had defects in dendrite arborization in the Dscam mutant retina, whereas other cell types appeared similar to wild type. The cone synapses that these cells project their dendrites to were intact, as visualized by electron microscopy, and had a distribution and density that was not significantly different from that of wild type. The spacing of type 3b bipolar cell dendrites was further analyzed by Voronoi domain analysis, density recovery profiling (DRP) analysis, and nearest neighbor analysis. Spacing was found to be significantly different when wild-type and mutant type 3b bipolar cell dendrites were compared. Defects in arborization of these bipolar cells could not be attributed to the disorganization of inner plexiform layer cells that occurs in the Dscam mutant retina or an increase in cell number, as they arborized when Dscam was targeted in retinal ganglion cells only or in the bax null retina. Localization of DSCAM was assayed and the protein was localized near to cone synapses in mouse, macaque, and ground squirrel retinas. DSCAM protein was detected in several types of bipolar cells, including type 3b and type 4 bipolar cells. J. Comp. Neurol. 522:2609-2633, 2014. © 2014 Wiley Periodicals, Inc. [ABSTRACT FROM AUTHOR]

The cephalopod digestive gland is a complex organ that, although analogous to the vertebrate liver, has additional functions, with special (albeit not exclusive) note on its active role in digestion. Although the structure of the digestive cell and its main constituents are well known (among which 'boules' and brown bodies are distinctive features), histological details of other cell types and the general structure of the digestive gland need still further research. By a thorough combination of histological and histochemical techniques, it is shown that the digestive gland diverticula of the common cuttlefish ( Sepia officinalis L.) are comprised of three essential cell types: digestive, basal and excretory. Basal ('pyramidal') cells are multi-functional, being responsible for cell replacement and detoxification, mainly through the production of calcic spherulae containing metals like copper and lead in a complex organic matrix of proteins and ribonucleins. Since copper- and lead-positive spherulae were almost absent from other cell types and lumen of the tubules, it appears that controlled bioaccumulation of these metals, rather than excretion, is the main detoxification mechanism. The results show that the organ is crossed by an intricate network of blood vessels, especially arteries and arterioles, whose contents share histochemical properties with a particular set of 'boules' that are shed into the lumen of diverticula for elimination, suggesting that the organ actively removes unwanted metabolites from the haemolymph. Conversely, the rarer excretory cells appear to be specialized in the elimination of salts. Although the exact nature of many excretory and secretory products, as the metabolic pathways that originate them, remain elusive, the findings suggest an intricate interaction between the different cell types and between these and the surrounding media: haemolymph and digestive tract. [ABSTRACT FROM AUTHOR]

The succession of the Lechówka section near Chełm in south-eastern Poland presents the first complete record of the Cretaceous-Paleogene (K-Pg) boundary in Poland. Samples of the boundary clay were examined for microtektites and shocked minerals to confirm the impact origin of the sediment. The spheroidal fraction reveals morphological and mineralogical features, e.g., spherules, similar to material from the K-Pg boundary as described from elsewhere. The impact genesis of the spherules is confirmed by the presence of nickel-rich spinel grains on their surfaces. The spinels are considered to be primary microlites and, thus, the spherules at Lechówka can be classified as microkrystites. No shocked minerals were noted. The deposits with spherules comprise Aland Mg-rich smectite (Cheto smectite). This almost pure Mg-rich smectite, forming up to 100% of the clay fraction, derived from the weathering of the impact glass. It is proposed that the spherules isolated from the Cretaceous- Paleogene boundary clay at Lechówka come from the Chicxulub crater in Mexico. [ABSTRACT FROM AUTHOR]

Coccidioidomycosis is the oldest of the major mycoses. In recent years the incidence of the disease has increased in California and Arizona, which may be partially due to the massive migration to the endemic region. The endemic region for the disease lays exclusively in the Western Hemisphere, between the 40° latitudes north and south. The disease manifests in one of four clinical syndromes: acute pulmonary, chronic pulmonary and acute or chronic disseminated coccidioidomycosis. Serologic tests identifying anticoccidioidal antibodies are the most frequently employed assays for diagnosis. Primary coccidioidomycosis is usually self-limited; therapy of primary disease is recommended when symptoms persist for more than 6 weeks, for severe acute cases and for patients with impaired cellular immunity. Chronic pulmonary coccidioidomycosis and all forms of disseminated coccidioidomycosis require antifungal therapy. The drugs of choice are either fluconazole or itraconazole. [ABSTRACT FROM AUTHOR]

Abstract: Spherules in the S3 bed of the Barberton greenstone belt, South Africa are distal fallout formed within an impact plume after a large impact event at 3.24Ga. Since that time, diagenesis and lower greenschist grade metamorphism of the spherules has changed the mineralogy, though shape and texture are largely preserved. Alteration of the S3 bed has resulted in spherules composed of quartz, phyllosilicates, Ti- and Fe-oxides, and some Ni-rich chromites. Initially, glassy spherules were palagonitized and silica cementation of the spherules began during low-temperature interaction with seawater. Further alteration by Si- and K-rich fluids resulted in a mineralogical assemblage of quartz, feldspar, and clays. Crystalline minerals were replaced by dissolution-precipitation processes, preserving relict textures. Further silica cementation resulted in complete lithification of the bed. Most of this alteration occurred at the seafloor and during shallow burial. With continued burial, amorphous silica recrystallized to microcrystalline quartz. Later recrystallization of clays to micas occurred during regional metamorphism at peak temperatures of 300–320°C. Late-stage shearing and mineralization preferentially affected the northern region of the belt. Samples from different sections record highly variable local conditions. Water depth, the amount of pre-depositional transport, location within the belt, and proximity to igneous dikes all affect the diagenesis of the S3 spherules. Silica and barite concentrations are lower, and carbonate concentrations are higher in the deep-water depositional environments. Element mobility during diagenetic and lower greenschist grade metamorphism can be inferred based on studies of multiple sections throughout the BGB. The most immobile elements are Al, Zr, Ti, Sc and the high field strength elements and present element ratios can be used to infer original composition of the spherules. The large ion lithophile elements are highly mobile, as are the light rare earth elements (REEs), which are particularly susceptible to mobilization during carbonate diagenesis and phosphate authigenesis. Of the REEs, Ce and Eu show the largest variability, suggesting significant mobilization during diagenesis and low-grade metamorphism. Consistent Cr/Ir ratios, particularly in the high concentrations suggest limited mobility, and segregation of platinum group elements into Ni-rich chromite-bearing spherules. Sulfide mineralization has not affected the Ir concentration in the S3 layer. [Copyright &y& Elsevier]

This paper provides first report of silica-rich anthropogenic spherules of varying colour, shape, size, surface texture and chemical composition found in road-deposited sediments (RDS) of Allahabad city, Uttar Pradesh, India. Morphological details and lithophile elemental composition of the silica-rich spherules are compared to microtektites and impact spherules from India to demonstrate their striking morphological similarities and chemical variability. This study suggests the need to use spherule data carefully while assigning an impact origin to spherule-finds or spherule-bearing lithological horizons. [ABSTRACT FROM AUTHOR]

comprehensive mineralogical-geochemical and petrological study of ignimbrites from the Yakut-Gora volcanic depression (Primorye, Far Eastern Russia) revealed a wide distribution of silica-metal spherules ('globules') that are typical liquid immiscibility resultant. The metallic portion of a spherule (composition varies from low-carbon iron to cohenite) borders gas pores and is rimmed by symplectite that consists of quartz, magnetite, and silica-potassic glass. This allows us to consider that the whole formation formed through reduction of the enclosing silicate melt. Abundant evidence of high reduction states of ignimbrite melts and the presence of iron carbides suggest an H-CH composition of the fluidal phase in ignimbrite magmas. [ABSTRACT FROM AUTHOR]

Abstract: The composition of spinels in 3.24-billion-year-old Archean impact spherules in the S3 spherule bed in the Barberton greenstone belt, South Africa, provides important clues about the environments within which they formed, including the redox conditions of the impact plume and the oxygen levels in the early atmosphere. Despite pervasive diagenetic alteration of the impact spherules and nearly complete alteration of primary mineralogy, primary Ni-rich chrome spinel is preserved. The impact spinels are significantly more oxidized than detrital spinels of komatiitic origin that are also present in the spherule bed. The average Fe+3/FeT (atoms) value in the Ni-rich impact spinels is 0.43 whereas the average Fe+3/FeT of detrital spinels is 0.17. Fe3+/FeT ratios of the impact spinels range from 0.26 to 0.69 (atoms) and suggest formation at oxygen fugacities below 10− 4 bar based on comparisons with experimental results. Comparison of the S3 impact spinels with similar spinels from the K/T boundary layer, Eocene impact layer, and Late Pliocene impact layer also suggests much lower O2 levels in the 3.24Ga atmosphere. Oxidation of spinels present in condensed melt droplets was affected by the oxygen fugacity of the atmospheric component mixed with the ejected plume, and the broad range in values may reflect fO2 heterogeneity both temporally and spatially within the impact-produced rock-vapor plume. Compositional and morphological variability of spinels in the spherules suggests temperature and cooling rate were heterogeneous through the plume. [ABSTRACT FROM AUTHOR]

Positive-strand RNA virus genome replication is invariably associated with extensively rearranged intracellular membranes. Recent biochemical and electron microscopy analyses, including three-dimensional electron microscope tomographic imaging, have fundamentally advanced our understanding of the ultrastructure and function of organelle-like RNA replication factories. Notably, for a range of positive-strand RNA viruses embodying many major differences, independent studies have revealed multiple common principles. These principles include that RNA replication often occurs inside numerous virus-induced vesicles invaginated or otherwise elaborated from a continuous, often endoplasmic reticulum-derived membrane network. Where analyzed, each such vesicle typically contains only one or a few genome replication intermediates in conjunction with many copies of viral nonstructural proteins. In addition, these genome replication compartments often are closely associated with sites of virion assembly and budding. Our understanding of these complexes is growing, providing substantial new insights into the organization, coordination, and potential control of crucial processes in virus replication. [ABSTRACT FROM AUTHOR]

If a vehicle that meets emission regulations operates sufficiently for a long time under low speed and low load conditions, soot contained in the exhaust gas is accumulated on the inner surface of the exhaust system. This soot deposition problem occurs frequently in all diesel cars. However, when a vehicle is placed under the conditions of sudden start and sudden acceleration after city mode driving for a long time, the deposited soot is abruptly blown up with the soot produced during fuel combustion. In the present study, the main cause of the abrupt outburst of deposited soot is investigated to overcome this adverse phenomenon. First, we developed a method to quantify the amount of the exhausted soot particles (or the accumulated soot particles) by measuring the opacity that represents the contamination level of the exhaust gas due to soot particles. Using this measuring scheme for deposited soot, we found the critical conditions for engine speeds and load conditions at which soot particles are emitted into the air without accumulation in the exhaust system using main muffler composed of three chambers. In order to meet these critical conditions and thus to drastically reduce soot accumulation, the exhaust system using the main muffler applied in this study must be designed to ensure that the flow velocity of the exhaust gas is higher than 62 m/s when the back pressure at the exit of the turbocharger is under 0.08 bars. [ABSTRACT FROM AUTHOR]

In some Ophidiiform fishes, the anterior part of the swimbladder is thickened into a hard structure called the “rocker bone”, which is thought to play a role in sound production. Although this structure has been described as cartilage or bone, its nature is still unknown. We have made a thorough analysis of the rocker bone in Ophidion barbatum and compared it with both classical bone and cartilage. The rocker bone appears to be a new example of mineralisation. It consists of (1) a ground substance mainly composed of proteoglycans (mucopolysaccharide acid) and fibres and (2) a matrix containing small mineralised spherules composed of a bioapatite and fibrils. These spherules are embedded in mineralised cement of a similar composition to the spherules themselves. The rocker bone grows via the apposition of new apatite spherules at its periphery. These spherules are first secreted by the innermost fibroblast layer of the capsule contained in the rocker bone and then grow extracellularly. Blood vessels, which represent the only means of transport for matrix and mineral material, are numerous. They enter the rocker bone via the hyle and ramify towards the capsule. We propose to call this new kind of mineralised tissue constituting the rocker bone “frigolite” (the Belgian name for styrofoam) in reference to the presence of spherules of different sizes and the peculiarity of the rocker bone in presenting a smooth surface when fractured. [ABSTRACT FROM AUTHOR]

We synthesized hematite spherules whose mineralogic, chemical, and crystallographic properties are strikingly similar to those for the hematite-rich spherules in lag deposits on the surface and embedded in outcrops at Meridiani Planum, Mars. The spherules were synthesized in the laboratory along with hydronium jarosite and minor hydronium alunite from Fe-Al-Mg-S-Cl acid-sulfate solutions under hydrothermal conditions. The reaction sequence was (1) precipitation of hydronium jarosite; (2) jarosite dissolution and precipitation of hematite spherules; and (3) precipitation of hydronium alunite upon depletion of hydronium jarosite. The spherules exhibit a radial growth texture with the crystallographic c axis aligned along the radial direction, so that thermal emission spectra have no hematite emissivity minimum at ~390 cm-1. Our experiments show that hydrothermal, acid-sulfate solutions are a pathway for formation of jarosite and the hematite spherules at Meridiani Planum, Mars. [ABSTRACT FROM AUTHOR]

Abstract: Synchrotron radiation, collimated to a μm scale was used for the determination of trace elements in micro-tektites and spherule material for the first time. The experimental set-up of the SXRF microprobe at beamline L at HASYLAB at DESY offers a suitable method for performing non-destructive in situ multi-element analysis focusing on spatial trace element distributions and mineral phases of the melted ejecta material from the Cretaceous/Tertiary boundary. The spatial distribution of trace elements was determined in melt inclusions as well as in phase transitions in selected parts of chlorite–smectite spherules and tektite glass material by using a beam with a diameter of 15 μm collimated with a glass capillary for line- and area scans as well as for single point measurements for elements with Z between 19 and 92. The analyzed spherules show alteration features but also zonation and carbonate inclusions, originating from the Chicxulub impact event. These initial results demonstrate the potential of μ-SXRF analysis for the discrimination of alteration and primary signals of the spherules and re-construction of their genetic evolution. It could be shown that the spherules represent a complex mixture of different materials from the subsurface at the Chicxulub impact site. [Copyright &y& Elsevier]

Abstract: Energy dispersive spectrometry (EDS), laser ablation inductively coupled plasma mass spectrometry (LA-ICPMS) track analyses of chlorite-dominated quench-textured microkrystite spherules and LA-ICPMS spot analyses of intra-spherule Ni-rich skeletal quench chromites from the 3243±4 Ma Barberton S3 impact fallout unit (lower part of the Mapepe Formation, Fig Tree Group, Barberton greenstone belt, Kaapvaal Craton, South Africa) reveal fractionated siderophile and PGE trace element patterns corresponding to chondrite-contaminated komatiite/basalt compositions. The chlorites, interpreted as altered glass, contain sharp siderophile elements and PGE spikes inherited from decomposed metal and Ni-rich chromite particles. LA-ICPMS spot analysis identifies PGE-rich micronuggets in Ni–chromites (Ir ∼12–100 ppm, Os ∼9–86 ppm, Ru ∼5–43 ppm) and lower levels of the volatile PGEs (Rh ∼1–11 ppm, Pd ∼0.68–0.96 ppm). Previously reported PGE anomalies in the order of hundreds of ppb in some Barberton microkrystite spherules are accounted for in terms of disintegration of PGE-rich micronuggets. Replacement of the Ni-chromites by sulphide masks primary chondritic patterns and condensation element distribution effects. High refractory/volatile PGE ratios pertain to both the chlorites and the Ni-rich chromites, consistent with similar compositional relations in microkrystite spherules from other impact fallout units in the Barberton greenstone belt and the Pilbara Craton, Western Australia. The near-consistent low Pt/Re and high V/Cr and V/Sc ratios in chlorite of the spherules, relative to komatiites, are suggestive of selective atmospheric condensation of the spherules which favored the relatively more refractory Re and V. Selective condensation may also be supported by depletion in the volatile Yb relative to Sm. Ni–Cr relationships allow estimates of the proportion of precursor crustal and meteoritic components of the spherules. Mass balance calculations based on the iridium flux allow estimates of the order of magnitude of the diameter of the chondritic projectile. [Copyright &y& Elsevier]

Abstract: The crystalline form of magnetic spherules, retrieved from the Pleistocene and Holocene mineral and organic surface sediments at the Northern foreland of Morasko meteorite-impact site, have been determined. While the magnetite (Fe3O4) composition of the spherules prevails, also hematite, maghemite and plagioclase crystalline inclusions have been observed. The magnetite form varies from amorphous, through fine powder, rough powder, holocrystalline to single crystals, as well as mixed forms, such as powder and holocrystalline, or amorphous and holocrystalline. The relieves on the surface of the spherules reflect the size and shape of the crystallites. The morphology of the spherules, their chemical composition and structure have been characterized and discussed in relation to the Morasko-Meteorite fall, and possible other cosmic, geological or anthropogenic origins. [Copyright &y& Elsevier]

Abstract: Iron-rich spherules (>90% Fe2O3 from electron microprobe analyses) ∼10–100 μm in diameter are found within sulfate-rich rocks formed by aqueous, acid-sulfate alteration of basaltic tephra on Mauna Kea volcano, Hawaii. Although some spherules are nearly pure Fe, most have two concentric compositional zones, with the core having a higher Fe/Al ratio than the rim. Oxide totals less than 100% (93–99%) suggest structural H2O and/or OH−1. The transmission Mössbauer spectrum of a spherule-rich separate is dominated by a hematite (α-Fe2O3) sextet whose peaks are skewed toward zero velocity. Skewing is consistent with Al3+ for Fe3+ substitution and structural H2O and/or OH−1. The grey color of the spherules implies specular hematite. Whole-rock powder X-ray diffraction spectra are dominated by peaks from smectite and the hydroxy sulfate mineral natroalunite as alteration products and plagioclase feldspar that was present in the precursor basaltic tephra. Whether spherule formation proceeded directly from basaltic material in one event (dissolution of basaltic material and precipitation of hematite spherules) or whether spherule formation required more than one event (formation of Fe-bearing sulfate rock and subsequent hydrolysis to hematite) is not currently constrained. By analogy, a formation pathway for the hematite spherules in sulfate-rich outcrops at Meridiani Planum on Mars (the Burns formation) is aqueous alteration of basaltic precursor material under acid-sulfate conditions. Although hydrothermal conditions are present on Mauna Kea, such conditions may not be required for spherule formation on Mars if the time interval for hydrolysis at lower temperatures is sufficiently long. [Copyright &y& Elsevier]

The deuteron induced gamma-ray emission (DIGE) method is not usually used for analytical purposes at nuclear microprobes; therefore we show here its capabilities at the microprobe facility of the Institute of Nuclear Research of the Hungarian Academy of Sciences (ATOMKI). In this paper the compositional analysis of magnetic spherules carried out earlier [Nucl. Instr. and Meth B 181 (2001) 557] is combined with the determination of their carbon and oxygen contents, elements which (beside nitrogen and hydrogen) play a relevant role in the study of planetary evolution and in the elucidation of the composition of cosmic parent bodies. [Copyright &y& Elsevier]

Two strains of Myxococcus xanthus, and a strain of Myxococcus fulvus were compared with respect to their ability to entrap and lyse trichomes of the cyanobacterium Phormidium luridum var. olivaceae. All of these isolates form colonial aggregates and spherules in either axenic culture with a tryptone-salts medium or in a mixed culture with viable cyanobacterial cells as the sole source of nutrients. Light microscopy showed evidence of swarming activity on the surface of all three myxococci with the accompanying formation of fruiting structures. Extended incubation of mixed cultures showed the myxococci to be capable of long-term control of the cyanobacterial population with predator-prey population cycling occurring on average every 9 days. Serial transfer of mixed cultures into either fresh autotrophic medium or cyanobacterial cultures of 10 per ml showed the persistence of predatory activity. Myxococcal densities were shown to return repeatedly to initial virulent levels. Predator inoculum levels could be reduced to 50 cells per 100 ml in a cyanobacterial culture of 10 per ml. These in vitro data enhance the potential of the myxococcus predatory colony as a biological control agent for in situ cyanobacteria. [ABSTRACT FROM AUTHOR]

A Myxococcus xanthus isolate from a farm drainage ditch, designated strain PCO2, is capable of rapidly inducing lysis of both agar and liquid-grown cultures of the cyanobacterium, Phormidium luridum, var. olivacea. Microscopic studies of the predator-prey interaction demonstrate that lysis of the cyanobacterium occurs within clumps and spherules formed by the cells of M. xanthus PCO2. In the earliest stage, one sees the formation of irregular microclumps of bacteria and cyanobacterial filaments. As these clumps mature, colonies 1 to 6 mm in diameter develops. The center of these densely green colonies contains cyanohacteria in various stages of degradation, while the periphery is almost exclusively a tightly woven mass of myxobacterial cells. Electron microscopy shows that long extrusions from the outer membrane of the M. xanthus PCO2 cells are involved in the formation both of initial clumps and of mature colonial spherules. These extrusions appear to efficiently entangle the cyanobacterial filaments in the culture environment. Predator-to-prey ratios of 1/10, 1/100 and 1/1,000 have resulted in cyanobacterial lysis. Because the entrapment and lysis of P. luridum filaments by M. xanthus PCO2 appears to be independent of any other heterotrophic nutritional requirement, as well as of environmental agitation, this system has potential as a biological control technique for undesirable aquatic cyanobacteria. [ABSTRACT FROM AUTHOR]