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Understanding variables that influence antibody responses to COVID-19 vaccination within a population can provide valuable information on future vaccination strategies. In this population-based study, we examined the antibody responses to COVID-19 vaccination in Manitoba using residual serum specimens collected between January 2021 and March 2022 (n = 20,365). Samples were tested for spike and nucleocapsid IgG against SARS-CoV-2 using clinically validated assays. We assessed the impacts of multiple factors on post-vaccination antibody titres including type of vaccine, age, sex, geographic location, number of doses received, and timing of vaccination. Our investigation demonstrated that vaccination with one dose of Moderna mRNA-1273 elicited higher anti-spike IgG titres overall compared to Pfizer BNT162b2 vaccination, while one dose of Pfizer BNT162b2 followed by a second dose of Moderna mRNA-1273 exhibited higher titres than two doses of Pfizer BNT162b2 or Moderna mRNA-1273, irrespective of age. Age and time post-vaccination had considerable effects on antibody responses, with older age groups exhibiting lower anti-spike IgG titres than younger ages, and titres of those vaccinated with Pfizer BNT162b2 waning faster than those vaccinated with Moderna mRNA-1273 or a combination of Pfizer BNT162b2 and Moderna mRNA-1273. Antibody titres did not appear to be affected by sex or geographic location. Our results identify how factors such as age and type of vaccine can influence antibody responses to vaccination, and how antibody titres wane over time. This information highlights the importance of tailoring vaccine regimens to specific populations, especially those at increased risk of severe COVID-19 and can be used to inform future vaccination strategies, scheduling of booster doses, and public health measures. [ABSTRACT FROM AUTHOR]

Ebola virus (EBOV; family Filoviridae, genus Ebolavirus) and Lassa virus (LASV; family Arenaviridae, genus Mammarenavirus) are prominent etiologic agents of viral hemorrhagic fever diseases in humans that have variable but [...]

Introduction: Vaccination plays a key role in curbing severe outcomes resulting from COVID-19 disease. With the Omicron variant and the relaxing of public health protections breakthrough infections are increasingly common, and certain groups remain at higher risk for severe outcomes from breakthrough infections. We analysed population-based public health data from Manitoba, Canada to understand characteristics of those experiencing breakthrough infections and severe outcomes from breakthrough infections. Data from previous pandemic stages can provide valuable information regarding severe outcomes associated with breakthrough infection in the Omicron and future phases. Methods: Positive SARS-CoV-2 PCR tests from Cadham Provincial Laboratory were linked to case information from the population-based Public Health Information Management System. A retrospective design was used with time-to-event analyses to examine severe outcomes among those experiencing breakthrough infection. Results: Breakthrough cases were more likely to have 2 + chronic conditions, compared to age-, sex-, and time-period matched unvaccinated cases (24% vs. 17%), with hypertension (30%), diabetes (17%), and asthma (14%) being the most prevalent chronic conditions amongst breakthrough cases. Severe outcomes resulting from breakthrough infection was associated with age and chronic conditions, with those with 2 + chronic conditions at higher risk of severe outcomes (adjusted hazard ratio: 3.6, 95% confidence intervals: 2.0-6.4). Risk of severe outcomes varied by age group, with those 70 + years at over 13 times the risk of severe outcomes (95% CI: 4.5-39.8), compared to those 18-29 years of age. Discussion: Our results demonstrate the impact of chronic conditions on the likelihood of, and severity of outcomes from breakthrough infections. These findings underscore the importance of vaccination programs prioritizing vulnerable populations. [ABSTRACT FROM AUTHOR]

Zika virus is a mosquito-borne member of the family Flaviviridae, genus Flavivirus, that was originally discovered in 1947 in Uganda (1). For several decades, Zika virus seemed to be geographically [...]

The true severity of infection due to COVID-19 is under-represented because it is based on only those who are tested. Although nucleic acid amplifications tests (NAAT) are the gold standard for COVID-19 diagnostic testing, serological assays provide better population-level SARS-CoV-2 prevalence estimates. Implementing large sero-surveys present several logistical challenges within Canada due its unique geography including rural and remote communities. Dried blood spot (DBS) sampling is a practical solution but comparative performance data on SARS-CoV-2 serological tests using DBS is currently lacking. Here we present test performance data from a well-characterized SARS-CoV-2 DBS panel sent to laboratories across Canada representing 10 commercial and 2 in-house developed tests for SARS-CoV-2 antibodies. Three commercial assays identified all positive and negative DBS correctly corresponding to a sensitivity, specificity, positive predictive value, and negative predictive value of 100% (95% CI = 72.2, 100). Two in-house assays also performed equally well. In contrast, several commercial assays could not achieve a sensitivity greater than 40% or a negative predictive value greater than 60%. Our findings represent the foundation for future validation studies on DBS specimens that will play a central role in strengthening Canada's public health policy in response to COVID-19. [ABSTRACT FROM AUTHOR]

In North America, Sin Nombre virus (SNV) is the main cause of hantavirus cardiopulmonary syndrome (HCPS), a severe respiratory disease with a fatality rate of 35–40%. SNV is a zoonotic pathogen carried by deer mice (Peromyscus maniculatus), and few studies have been performed examining its transmission in deer mouse populations. Studying SNV and other hantaviruses can be difficult due to the need to propagate the virus in vivo for subsequent experiments. We show that when compared with standard intramuscular infection, the intraperitoneal infection of deer mice can be as effective in producing SNV stocks with a high viral RNA copy number, and this method of infection provides a more reproducible infection model. Furthermore, the age and sex of the infected deer mice have little effect on viral replication and shedding. We also describe a reliable model of direct experimental SNV transmission. We examined the transmission of SNV between deer mice and found that direct contact between deer mice is the main driver of SNV transmission rather than exposure to contaminated excreta/secreta, which is thought to be the main driver of transmission of the virus to humans. Furthermore, increases in heat shock responses or testosterone levels in SNV-infected deer mice do not increase the replication, shedding, or rate of transmission. Here, we have demonstrated a model for the transmission of SNV between deer mice, the natural rodent reservoir for the virus. The use of this model will have important implications for further examining SNV transmission and in developing strategies for the prevention of SNV infection in deer mouse populations. [ABSTRACT FROM AUTHOR]

Syphilis, caused by Treponema pallidum subsp. pallidum (TPA), is becoming a significant public health concern, with rising incidence in Manitoba exceeding the national average. The province has also seen a demographic shift leading to women representing 51.9% of cases in 2021, leading to the re-emergence of congenital syphilis. Given the similarities in lesion appearance between TPA and other pathogens such as herpesviruses, accurate diagnosis is crucial for effective management and prevention. In order to address the potential for missed TPA cases, we conducted a quality assurance study from June 2021 to March 2023, screening over 5,000 mucocutaneous lesion swabs for TPA, initially submitted for herpes simplex virus (HSV) and varicella zoster virus (VZV) testing. Positivity rates were 13% for HSV1, 13% for HSV2, 6.7% for VZV, and 6.6% for TPA. Turnaround times (TAT) for TPA testing, as a send-out to the reference laboratory, averaged 17.8 days. Of the TPA-positive specimens, 36% did not have a corresponding TPA PCR test ordered, and 19% did not have accompanying syphilis serology within 30 days of collection. Creation of a multiplex lesion panel identified high sensitivity and specificity for HSV1, HSV2, VZV, and TPA, with robust reproducibility across multiple runs. Incorporation of TPA into a lesion panel improved the TAT to 4 days. Our findings emphasize the need for improved testing strategies to combat the syphilis epidemic and enhance public health outcomes.IMPORTANCESyphilis resurgence has become a significant global public health concern. In particular, the Canadian Prairies have been struggling with high incidence since 2016, exceeding the national Canadian average. We undertook a quality assurance study that highlighted significant gaps in diagnosis of acute syphilis, which led to the development of a highly sensitive and specific multiplex lesion assay for the dual detection of herpes simplex virus type 1 (HSV-1), herpes simplex virus type 2 (HSV-2), varicella zoster virus (VZV), and syphilis., Competing Interests: The authors declare no conflict of interest.

Background: During the first year of the COVID-19 pandemic, the proportion of reported cases of COVID-19 among Canadians was under 6%. Although high vaccine coverage was achieved in Canada by fall 2021, the Omicron variant caused unprecedented numbers of infections, overwhelming testing capacity and making it difficult to quantify the trajectory of population immunity., Methods: Using a time-series approach and data from more than 900 000 samples collected by 7 research studies collaborating with the COVID-19 Immunity Task Force (CITF), we estimated trends in SARS-CoV-2 seroprevalence owing to infection and vaccination for the Canadian population over 3 intervals: prevaccination (March to November 2020), vaccine roll-out (December 2020 to November 2021), and the arrival of the Omicron variant (December 2021 to March 2023). We also estimated seroprevalence by geographical region and age., Results: By November 2021, 9.0% (95% credible interval [CrI] 7.3%-11%) of people in Canada had humoral immunity to SARS-CoV-2 from an infection. Seroprevalence increased rapidly after the arrival of the Omicron variant - by Mar. 15, 2023, 76% (95% CrI 74%-79%) of the population had detectable antibodies from infections. The rapid rise in infection-induced antibodies occurred across Canada and was most pronounced in younger age groups and in the Western provinces: Manitoba, Saskatchewan, Alberta and British Columbia., Interpretation: Data up to March 2023 indicate that most people in Canada had acquired antibodies against SARS-CoV-2 through natural infection and vaccination. However, given variations in population seropositivity by age and geography, the potential for waning antibody levels, and new variants that may escape immunity, public health policy and clinical decisions should be tailored to local patterns of population immunity., Competing Interests: Competing interests: Maureen Anderson reports receiving a Saskatchewan Health Research Foundation Establishment Grant, in support of the present manuscript. Lesley Behl reports receving funding from the CITF via a research grant paid to the University of Saskatchewan, in support of the present manuscript. Patrick Brown reports receiving grant support from the CITF. Carmen Charlton reports receiving grant funding from Merck and support for attending meetings or travel from AMMI Canada. Karen Colwill reports receiving an honorarium for a presentation to the Ontario Society of Clinical Chemists. Dr. Colwill is also the vice president of communications for the Canadian National Proteomics Network. Tim Evans reports receiving support for the present manuscript from the CITF, and holds the role of its executive director. Anne-Claude Gingras reports receiving support for automated equipment for ELISA, housed at the Lunenfeld-Tanenbaum Research Institute (a facility supported by Canada Foundation for Innovation funding, the Ontario Government, Genome Canada and Ontario Genomics); support from the Canadian Institutes of Health Research (CIHR) for general lab operations; salary support as a Canada Research Chair (Tier 1) in functional proteomics; and from CITF and the Public Health Agency of Canada (PHAC) for assay calibration at Mount Sinai, all in support of the present manuscript. Dr. Gingras has had a contract with Providence Therapeutics (no consultation fees received), and has received grant funding from CIHR for several SARS-CoV-2 studies and from the Ontario Research Fund, outside of the present work. Dr. Gingras has served as the chair of the Institute Advisory Board of the CIHR Institute of Genetics and is a member and chair of the Human Health Therapeutics Division advisory board, National Research Council of Canada. Dr. Gingras is a member of the CITF working parties on testing and immunology, and is pillar lead of the Functional Genomics and Structure Function of CoVaRR-Net (all roles unpaid). Steven Drews reports receiving grants or contracts from CIHR and Alberta Innovates, consulting fees from Roche, support for attending meetings or travel from the Canadian Immunization Research Network and other support from Abbott. Jaspreet Jain reports receiving support from the CITF for the present manuscript. Prabhat Jha reports receiving grant support from the CITF for the Action to Beat Coronavirus study. Amanda Lang reports receiving funding from the CITF, in support of the present manuscript, for assay reagents and technologist salary. Dr. Lang has also received support from the CITF to attend a CITF meeting. Stephen Lee reports receiving funding from the CITF, in support of the present manuscript. Sheila O’Brien reports receiving payment (paid to Canadian Blood Services [CBS]) from the Government of Canada, and laboratory infrastructure from CBS, in support of the present manuscript. Chantale Pambrun reports receiving salary support from CBS, and study funding from PHAC. Olivia Oxlade is an employee of the CITF Secretariat. David Stephens reports receiving funds for a graduate student from the National Science and Engineering Research Council Emerging Infectious Disease Modelling, in support of the present manuscript. Hanna Swail reports receiving support from the CITF for the present manuscript. David Buckeridge reports receiving funding from PHAC, in support of the present manuscript. No other competing interests were declared., (© 2023 CMA Impact Inc. or its licensors.)

Background: Insufficient data on the rate and distribution of SARS-CoV-2 infection in Canada has presented a substantial challenge to the public health response to the COVID-19 pandemic. Our objective was to assess SARS-CoV-2 seroprevalence in a representative sample of pregnant people throughout Canada, across multiple time points over 2 years of the pandemic, to describe the seroprevalence and show the ability of this process to provide prevalence estimates., Methods: This Canadian retrospective serological surveillance study used existing serological prenatal samples across 10 provinces over multiple time periods: Feb. 3-21, 2020; Aug. 24-Sept. 11, 2020; Nov. 16-Dec. 4, 2020; Nov. 15-Dec. 3, 2021; and results from the province of British Columbia during a period in which the SARS-CoV-2 B.1.1.529 (Omicron) variant was predominant, from Nov. 15, 2021, to June 11, 2022. Age and postal code administrative data allowed for comparison with concurrent polymerase chain reactivity (PCR)-positive results collected by Statistics Canada and the Canadian Surveillance of COVID-19 in Pregnancy (CANCOVID-Preg) project., Results: Seropositivity in antenatal serum as early as February 2020 indicates SARS-CoV-2 transmission before the World Health Organization's declaration of the pandemic. Seroprevalence in our sample of pregnant people was 1.84 to 8.90 times higher than the recorded concurrent PCR-positive prevalence recorded among females aged 20-49 years in November-December 2020. Overall seropositivity in our sample of pregnant people was low at the end of 2020, increasing to 15% in 1 province by the end of 2021. Seroprevalence among pregnant people in BC during the Omicron period increased from 5.8% to 43% from November 2021 to June 2022., Interpretation: These results indicate widespread vulnerability to SARS-CoV-2 infection before vaccine availability in Canada. During the time periods sampled, public health tracking systems were under-reporting infections, and seroprevalence results during the Omicron period indicate extensive community spread of SARS-CoV-2 infection., Competing Interests: Competing interests: Lori Beach reports receiving funding from the Public Health Agency of Canada (PHAC) and from the Canadian Diagnostic Executive Forum, Toronto, for support for travel to speak at a meeting. Dr. Beach is also division head of Public Outreach and Communications for the Canadian Society of Clinical Chemists. Shelly Bolotin reports receiving support for the present manuscript from COVID-19 Immunity Task Force and Public Health Ontario. Dr. Bolotin is co-investigator on several COVID-19 grants funded by the Canadian Institutes of Health Research (CIHR), the Canadian Immunity Taskforce, the Canadian Immunization Research Network and PHAC. Dr. Bolotin is associate professor at the University of Toronto and, as part of that role, is director of the centre for Vaccine Preventable Diseases at the university. The centre is supported by the Dalla Lana School of Public Health (DLSPH), which receives funding from government, philanthropic, not-for-profit and private-sector organizations. Private-sector funding sources include vaccine manufacturers, specifically Merck, Sanofi and Pfizer. A set of governance processes are in place at the DLSPH to ensure independent operation of the centre. Isabelle Boucoiran reports receiving grants or contracts from Altona, the National Institutes of Health, CIHR and the Québec Ministère de la Santé et des Services Sociaux, and consulting fees from Pfizer. Dr. Boucoiran has also received equipment, materials, drugs, medical writing, gifts or other services from Altona. Mel Krajden reports receiving reagent support from Siemens to assess SARS-CoV-2 serology and had a contract with Hologic to support respiratory virus testing. Vanessa Poliquin reports receiving grants or contracts from GSK as the site principal investigator for a respiratory syncytial virus vaccine study. Dr. Poloquin has received an honorarium from Sanofi Pasteur for teaching at a continuing medical education event and payment for expert testimony from the Department of Justice Canada. George Zahariadis reports receiving support for the current manuscript from the Public Health Agency of Canada, as well as grants or contracts from Genome Atlantic and CIHR. Dr. Zahariadis also reports receiving unrestricted educational funding from Roche and Abbott to the Eastern Health Regional Health Authority to attend virtual meetings and in specific restricted circumstances, travel to educational, technical and research meetings. Dr. Zahariadis is the past president of the National Molecular Users Group. Jason Robinson reports receiving a Roche Ideas Grant including in-kind reagents for previous work on salivary antibody detection. Vanessa Tran reports receiving grants from CIHR, the COVID-19 Immunity Task Force, Canadian Immunization Research Network and PHAC, outside the submitted work. Dr. Tran is also a member of Canadian Immunization Research Network Management Committee and the COVID-19 Immunity Task Force Leadership Group. Deborah Money reports receiving support for the present manuscript from PHAC, paid to the institution on behalf of the COVID-19 Immunity Task Force. Dr. Money has also received past funding for unrelated work from Merck, GSK, Sanofi and Novartis, paid to the institution. No other competing interests were declared., (© 2023 CMA Impact Inc. or its licensors.)

We compared the seroprevalence of SARS-CoV-2 anti-nucleocapsid antibodies in blood donors across Canadian regions in 2021. The seroprevalence was the highest in Alberta and the Prairies, and it was so low in Atlantic Canada that few correlates were observed. Being male and of young age were predictive of seropositivity. Racialization was associated with higher seroprevalence in British Columbia and Ontario but not in Alberta and the Prairies. Living in a materially deprived neighborhood predicted higher seroprevalence, but it was more linear across quintiles in Alberta and the Prairies, whereas in British Columbia and Ontario, the most affluent 60% were similarly low and the most deprived 40% similarly elevated. Living in a more socially deprived neighborhood (more single individuals and one parent families) was associated with lower seroprevalence in British Columbia and Ontario but not in Alberta and the Prairies. These data show striking variability in SARS-CoV-2 seroprevalence across regions by social determinants of health. IMPORTANCE Canadian blood donors are a healthy adult population that shows clear disparities associated with racialization and material deprivation. This underscores the pervasiveness of the socioeconomic gradient on SARS-CoV-2 infections in Canada. We identify regional differences in the relationship between SARS-CoV-2 seroprevalence and social determinants of health. Cross-Canada studies, such as ours, are rare because health information is under provincial jurisdiction and is not available in sufficient detail in national data sets, whereas other national seroprevalence studies have insufficient sample sizes for regional comparisons. Ours is the largest seroprevalence study in Canada. An important strength of our study is the interpretation input from a public health team that represented multiple Canadian provinces. Our blood donor seroprevalence study has informed Canadian public health policy at national and provincial levels since the start of the SARS-CoV-2 pandemic.