71 results on '"Subhankar Ray"'
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2. Usage of E-Resources in University Libraries India
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Dr. Alok Kumar Tripathi, Anuradha Kanoujiya, Ranjana Srivastava, Jyoti Tomar, Maharani Laxmi Bai, Susan Babu, Dr. Shamala N. B., Tahir Ahmed Batt, Dr. Ashwani Kumar, Avijit Rai, Dr. Sarbada Pradhan, Subhankar Ray Cowdhury, Mrs. Supriya Banerjee, Laxmi Yallappa Kamble, Prof. Vinayak M. Bankapu, Suhail Nabi, Qurat Ul Ain, Subhajit Panda, Shivjee Prasad, Poonam M. Josh, Dr. Suranjan Chakraborty, Dr. Payare Lal, Dr. Suman Singh, Dr. (Ms.) Shiva Parihar, Dr. (Prof.) D.V. Singh, Chandrasen Jangde, Mr. Shivjee Prasad, Dr. Alok Kumar Tripathi, Anuradha Kanoujiya, Ranjana Srivastava, Jyoti Tomar, Maharani Laxmi Bai, Susan Babu, Dr. Shamala N. B., Tahir Ahmed Batt, Dr. Ashwani Kumar, Avijit Rai, Dr. Sarbada Pradhan, Subhankar Ray Cowdhury, Mrs. Supriya Banerjee, Laxmi Yallappa Kamble, Prof. Vinayak M. Bankapu, Suhail Nabi, Qurat Ul Ain, Subhajit Panda, Shivjee Prasad, Poonam M. Josh, Dr. Suranjan Chakraborty, Dr. Payare Lal, Dr. Suman Singh, Dr. (Ms.) Shiva Parihar, Dr. (Prof.) D.V. Singh, Chandrasen Jangde, and Mr. Shivjee Prasad
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This Edited Book Usage of E-Resources in University Libraries India describes the use and use of e-resources in the academic library and analyses the status of use of e-resources. Information technology (IT) has made rapid changes in the field of education. Along with this, librarians will also have to adapt to this new development for storage and e-delivery and dissemination of information. At present libraries of all kinds whether public, research academic or special libraries are overwhelmingly looking forward to adopting new technologies mostly use of e-resources due to its potential for cost savings in operations and the management of collections and Patrons. E- Resources are digital objects containing electronic representation of books, journals and other form of reading materials and they are converted into a digitized form in order to be read by a computer. In today’s world electronic resources (e- resources) have become very popular, and libraries are no exception. Today, the academic libraries are procuring more and more e-resources for their libraries. It gives an overview of the relationship of e-resources with information literacy. It also gives an overview of the different chapters of information literacy on e-resources in university libraries. This various contribution study investigated the use of electronic resources by the students, research scholars and faculty members. It examined the user’s awareness of the different types of e-resources available in the University Library, purpose and frequency of using e-resources by the users, the factor affecting resource utilization, impact of e-resources and services on the academic work of the users, suggest the ways and means for the effective use of e-resources and services available in University Library, etc.
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- 2023
3. Effect of angle of attack and wind direction on limiting input heat flux for solar assisted thermoelectric power generator with plate fin heat sink
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Rakesh Kumar Nayak, Prasanta Kumar Satapathy, Subhankar Ray, and Sudhansu S. Sahoo
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Materials science ,Renewable Energy, Sustainability and the Environment ,Angle of attack ,Astrophysics::High Energy Astrophysical Phenomena ,020209 energy ,02 engineering and technology ,Mechanics ,Wind direction ,Heat sink ,021001 nanoscience & nanotechnology ,Wind speed ,Fin (extended surface) ,Thermoelectric generator ,Heat flux ,0202 electrical engineering, electronic engineering, information engineering ,General Materials Science ,0210 nano-technology ,Wind tunnel - Abstract
This paper focuses on establishing the dependence of limiting value of input heat flux for solar assisted thermoelectric generators (TEG) on Angle of Attack (AOA) and wind direction of heat sink of TEG. Current study investigates the limiting input heat flux for TEGs with allowable hot side temperature of 150 °C. A fin block with eight fin configuration and fin length of 60 mm is chosen as heat sink configuration for TEG. Computational Fluid Dynamics (CFD) model is developed and analyzed in this work after validation with published experimental results. CFD model consists of four TEGs encapsulated within a target block and a finned block, placed within a domain which simulates low speed wind tunnel. Air flow in the wind tunnel simulates the outdoor wind conditions. Concentrated solar flux is applied on the face of target block. Effect of ambient air temperature on limiting input heat flux is also studied. Dependence of limiting input heat flux on Angle of Attack (AOA) and wind direction, which arises due to the two axis tracking of Sun by Fresnel lens concentrator has been quantified and it is observed that maximum limiting input heat flux occurs at 30 ° AOA. Maximum limiting heat flux reaches 24,000 W/m2 for 30 ° AOA under 5 m/s wind velocity. It is also observed that maximum input heat flux varies by 42.49% with change in wind velocity from 1 to 5 m/s. Maximum limiting input heat flux occurs at 45 ° for horizontal rotation. Area of square array Fresnel lens concentrator varies by 6.29% for 5 m/s wind velocity when AOA is considered to when AOA is not considered for calculation of Fresnel lens area.
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- 2019
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4. Effect of Inlet Temperature of Heat Transfer Fluid and Wind Velocity on the Performance of Parabolic Trough Solar Collector Receiver: A Computational Study
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Suneet Singh, Arun Kumar Tripathy, Subhankar Ray, and Sudhansu Sahoo
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Fluid Flow and Transfer Processes ,Inlet temperature ,Materials science ,Mechanical Engineering ,Heat transfer fluid ,Parabolic trough ,Mechanics ,Condensed Matter Physics ,Wind speed - Published
- 2019
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5. Numerical study on heat transfer and pressure drop characteristics of fluid flow in an inserted coiled tube type three fluid heat exchanger
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Taraprasad Mohapatra, Biranchi Narayana Padhi, Sudhansu S. Sahoo, and Subhankar Ray
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Fluid Flow and Transfer Processes ,Pressure drop ,Materials science ,Heat exchanger ,Heat transfer ,Fluid dynamics ,Tube (fluid conveyance) ,Mechanics ,Condensed Matter Physics ,Helical coil - Published
- 2019
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6. Efficient parallel algorithms for shared memory and message passing parallel architectures to test the robust stability of control systems.
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Subhankar Ray, S. P. Bhattacharyya 0001, and Arkady Kanevsky
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- 1995
7. Performance analysis of receiver of parabolic trough solar collector: Effect of selective coating, vacuum and semitransparent glass cover
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Hitesh Bindra, Arun Kumar Tripathy, Subhankar Ray, and Sudhansu S. Sahoo
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Materials science ,Renewable Energy, Sustainability and the Environment ,020209 energy ,Energy Engineering and Power Technology ,02 engineering and technology ,engineering.material ,Glass cover ,Fuel Technology ,Nuclear Energy and Engineering ,Coating ,0202 electrical engineering, electronic engineering, information engineering ,engineering ,Parabolic trough ,Composite material - Published
- 2018
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8. Structural analysis of absorber tube used in parabolic trough solar collector and effect of materials on its bending: A computational study
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Arun Kumar Tripathy, Sudhansu S. Sahoo, Shanta Chakrabarty, and Subhankar Ray
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Materials science ,Renewable Energy, Sustainability and the Environment ,020209 energy ,Multiphysics ,02 engineering and technology ,Thermal expansion ,Thermal conductivity ,Heat flux ,Deflection (engineering) ,Thermal ,0202 electrical engineering, electronic engineering, information engineering ,Mass flow rate ,Parabolic trough ,General Materials Science ,Composite material - Abstract
The maximum deflection of a Parabolic Trough Solar Collector (PTSC) absorber tube is a result of the circumferential non-uniformity in temperature distribution and self-weight. This non-uniformity in temperature is a factor of incoming solar flux distribution as well as material property of the absorber tube. The present work focuses on structural analysis of absorber tube used in PTSC and the effects of variations of material. Multiphysics platform, namely thermal-fluid analysis and structural analysis has been made in this regard. The computational investigation has been carried out on Schott PTR70 2008 receiver and Therminol VP1 as the Heat Transfer Fluid (HTF). Evacuated annular space along with specular and non-grey nature of glass cover which is semi-transparent to the input flux has been modeled to obtain better accuracy in results. The materials investigated are steel, copper, aluminum and various laminated composites like bimetallic (Cu-Fe) and tetra-layered laminate (Cu-Al-SiC-Fe), which are subjected to different mass flow rate of HTF at the absorber tube inlet with constant heat flux on the absorber tube outer surface. It is found that the change in the material of the absorber tube has a negligible effect on the amount of heat transferred to the HTF, but it has a significant effect on the bending due to thermal expansion as well as due to self-weight. Steel absorber tube is generally used, but its lower thermal conductivity results in poor circumferential temperature distributions. Copper has better thermal characteristics, but higher self-weight and lower mechanical strength compared to steel. So a combined effect of these properties is utilized in bimetallic tube, which results in a decrease in maximum deflection by 7–15% as compared to steel. As the self-weight of the absorber tube plays a vital role in deflection, therefore a tetra-layered laminate absorber tube having lower weight and improved temperature distribution results in a decrease in maximum deflection by 45–49% as compared to steel.
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- 2018
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9. Additional file 1: of Molecular association of glucose-6-phosphate isomerase and pyruvate kinase M2 with glyceraldehyde-3-phosphate dehydrogenase in cancer cells
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Das, Mahua, Bag, Arup, Saha, Shekhar, Ghosh, Alok, Dey, Sumit, Provas Das, Mandal, Chitra, Subhankar Ray, Saikat Chakrabarti, Ray, Manju, and Siddhartha Jana
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Supplementary material. (PDF 623 kb)
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- 2019
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10. of Molecular association of glucose-6-phosphate isomerase and pyruvate kinase M2 with glyceraldehyde-3-phosphate dehydrogenase in cancer cells
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Das, Mahua, Bag, Arup, Saha, Shekhar, Ghosh, Alok, Dey, Sumit, Provas Das, Mandal, Chitra, Subhankar Ray, Saikat Chakrabarti, Ray, Manju, and Siddhartha Jana
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of Molecular association of glucose-6-phosphate isomerase and pyruvate kinase M2 with glyceraldehyde-3-phosphate dehydrogenase in cancer cells
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- 2019
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11. Nanofabrication of methylglyoxal with chitosan biopolymer: a potential tool for enhancement of its anticancer effect
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Chitra Mandal, Aparajita Pal, Dipa Talukdar, Manju Ray, Anirban Roy, Subhankar Ray, and Asish Mallick
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Materials science ,sarcoma-180 ,Cell Survival ,Metabolite ,Biophysics ,Pharmaceutical Science ,Bioengineering ,Nanotechnology ,Antineoplastic Agents ,Pharmacology ,Biomaterials ,Chitosan ,chemistry.chemical_compound ,Mice ,A549 ,In vivo ,International Journal of Nanomedicine ,Cell Line, Tumor ,Drug Discovery ,Animals ,Humans ,Glycolysis ,EAC ,Original Research ,Organic Chemistry ,Methylglyoxal ,technology, industry, and agriculture ,apoptosis ,General Medicine ,Pyruvaldehyde ,anticancer agent ,chemistry ,Apoptosis ,nano-methylglyoxal ,Drug delivery ,Cancer cell ,Nanoparticles ,C2C12 ,HBL-100 - Abstract
Aparajita Pal,1,* Dipa Talukdar,1,* Anirban Roy,1 Subhankar Ray,2 Asish Mallick,3 Chitra Mandal,3 Manju Ray1 1Department of Biophysics, Bose Institute, Kolkata, India; 2Department of Biochemistry, University of Calcutta, Kolkata, India; 3Cancer Biology and Inflammatory Disorder Division, Council of Scientific and Industrial Research (CSIR)-Indian Institute ofChemical Biology, Kolkata,India *These authors contributed equally tothis work Purpose: The normal metabolite methylglyoxal (MG) specifically kills cancer cells by inhibiting glycolysis and mitochondrial respiration without much adverse effect upon normal cells. Though the anticancer property of MG is well documented, its gradual enzymatic degradation in vivo has prompted interest in developing a nanoparticulate drug delivery system to protect it and also to enhance its efficacy. Materials and methods: MG-conjugated chitosan nanoparticles (Nano-MG) were prepared by conjugating the carbonyl group of MG with the amino group of chitosan polymer (Schiff’s base formation). Nano-MG were characterized in detail using the dynamic light scattering method, zeta potential measurement, Fourier transform infrared spectroscopy, and transmission electron microscopic analysis. Amount of MG anchored to Nano-MG, stability of Nano-MG, and in vitro release of MG from Nano-MG were estimated spectrophotometrically. Ehrlich ascites carcinoma (EAC) cells, human breast cancer cell line HBL-100, and lung epithelial adenocarcinoma cell line A549 were used as test systems to compare Nano-MG with bare MG in vitro. Cytotoxicity to EAC cells was evaluated by the trypan blue dye exclusion test, and cell viability of HBL-100 and A549 cells were studied using 3-(4,5-dimethylthiazol-2-yl) 2,5-diphenyltetrazolium bromide (MTT) assay. Apoptosis of HBL-100 cells was assessed by flow cytometry and confocal microscopy. In vivo studies were performed on both EAC cells inoculated and also in sarcoma-180-induced solid tumor-bearing Swiss albino mice to assess the anticancer activity of Nano-MG in comparison to bare MG with varying doses, times, and administrative routes. Results: Fourier transform infrared spectroscopy revealed the presence of imine groups in Nano-MG due to conjugation of the amino group of chitosan and carbonyl group of MG with diameters of nanoparticles ranging from 50–100 nm. The zeta potential of Nano-MG was+21mV and they contained approximately 100 µg of MG in 1 mL of solution. In vitro studies with Nano-MG showed higher cytotoxicity and enhanced rate of apoptosis in the HBL-100 cell line in comparison with bare MG, but no detrimental effect on normal mouse myoblast cell line C2C12 at the concerned doses. Studies with EAC cells also showed increased cell death of nearly 1.5 times. Nano-MG had similar cytotoxic effects on A549 cells. In vivo studies further demonstrated the efficacy of Nano-MG over bare MG and found them to be about 400 times more potent in EAC-bearing mice and nearly 80 times more effective in sarcoma-180-bearing mice. Administration of ascorbic acid and creatine during in vivo treatments augmented the anticancer effect of Nano-MG.Conclusion: The results clearly indicate that Nano-MG may constitute a promising tool in anticancer therapeutics in the near future. Keywords: nano-methylglyoxal, anticancer agent, C2C12, HBL-100, A549, EAC, sarcoma-180, apoptosis
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- 2015
12. Multistep surface diffusion sensitive to diffusion length
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Baisakhi Mal, Subhankar Ray, and J. Shamanna
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Surface diffusion ,Condensed matter physics ,Anomalous diffusion ,Chemistry ,Exponent ,Effective diffusion coefficient ,Deposition (phase transition) ,Diffusion (business) ,Diffusion limit ,Probable mechanism - Abstract
Random deposition model with surface diffusion over several next nearest neighbours is studied. Several extensions of diffusion models to include multistep diffusion gives Family’s surface diffusion model in the nearest neighbour diffusion limit. The results for the various extensions agree with the results obtained by Family for the case of nearest neighbour diffusion. However, for larger allowed diffusion length, the growth exponent and roughness exponent show interesting dependence on diffusion length. The variation of values of exponents are fitted to empirical equations. The probable mechanism for dependence of exponents on the diffusion length is discussed.
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- 2017
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13. Methylglyoxal with glycine or succinate enhances differentiation and shoot morphogenesis in Nicotiana tabacum callus
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Sandip Mukhopadhyay, A. Ray, Subhankar Ray, and Manju Ray
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biology ,Nicotiana tabacum ,fungi ,Methylglyoxal ,food and beverages ,Corm ,Organogenesis ,Plant Science ,Horticulture ,biology.organism_classification ,chemistry.chemical_compound ,chemistry ,Biochemistry ,Callus ,Chlorophyll ,Glycine ,Shoot - Abstract
The aim of this study was to evaluate the influence of methylglyoxal (MG) on organogenesis and regeneration of tobacco (Nicotiana tabacum L.) plants from callus in media containing glycine or succinate. The best improvement in shoot proliferation and shoot length was obtained in the medium supplemented with 0.1 mM MG and 0.5 mM glycine or 0.25 mM succinate. The histological studies showed vigorous development of corm like structures and shoot organogenesis from callus tissues cultured in MG supplemented media. Biochemical studies also revealed higher content of δ-aminolaevulinic acid (a precursor of chlorophyll) and of chlorophyll.
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- 2013
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14. Molecular association of glucose-6-phosphate isomerase and pyruvate kinase M2 with glyceraldehyde-3-phosphate dehydrogenase in cancer cells
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Arup K Bag, Manju Ray, Siddhartha S. Jana, Provas Das, Chitra Mandal, Subhankar Ray, Shekhar Saha, Alok Ghosh, Mahua Rani Das, Sumit K. Dey, and Saikat Chakrabarti
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0301 basic medicine ,Cancer Research ,Pyruvate dehydrogenase kinase ,Pyruvate Kinase ,Molecular association ,Gene Expression ,PKM2 ,Mass Spectrometry ,Ehrlich ascites carcinoma ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,Enzyme activator ,0302 clinical medicine ,stomatognathic system ,Neoplasms ,Genetics ,Animals ,Protein Interaction Domains and Motifs ,Carcinoma, Ehrlich Tumor ,Glyceraldehyde 3-phosphate dehydrogenase ,Pyruvate kinase M2 ,biology ,Glucose-6-Phosphate Isomerase ,Glyceraldehyde-3-Phosphate Dehydrogenases ,Malignancy ,Pyruvaldehyde ,Molecular biology ,Enzyme Activation ,Disease Models, Animal ,030104 developmental biology ,Oncology ,Biochemistry ,Glucose 6-phosphate ,chemistry ,030220 oncology & carcinogenesis ,Cancer cell ,biology.protein ,Glyceraldehyde-3-phosphate dehydrogenase ,Pyruvate kinase ,Protein Binding ,Research Article - Abstract
Background For a long time cancer cells are known for increased uptake of glucose and its metabolization through glycolysis. Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is a key regulatory enzyme of this pathway and can produce ATP through oxidative level of phosphorylation. Previously, we reported that GAPDH purified from a variety of malignant tissues, but not from normal tissues, was strongly inactivated by a normal metabolite, methylglyoxal (MG). Molecular mechanism behind MG mediated GAPDH inhibition in cancer cells is not well understood. Methods GAPDH was purified from Ehrlich ascites carcinoma (EAC) cells based on its enzymatic activity. GAPDH associated proteins in EAC cells and 3-methylcholanthrene (3MC) induced mouse tumor tissue were detected by mass spectrometry analysis and immunoprecipitation (IP) experiment, respectively. Interacting domains of GAPDH and its associated proteins were assessed by in silico molecular docking analysis. Mechanism of MG mediated GAPDH inactivation in cancer cells was evaluated by measuring enzyme activity, Circular dichroism (CD) spectroscopy, IP and mass spectrometry analyses. Result Here, we report that GAPDH is associated with glucose-6-phosphate isomerase (GPI) and pyruvate kinase M2 (PKM2) in Ehrlich ascites carcinoma (EAC) cells and also in 3-methylcholanthrene (3MC) induced mouse tumor tissue. Molecular docking analyses suggest C-terminal domain preference for the interaction between GAPDH and GPI. However, both C and N termini of PKM2 might be interacting with the C terminal domain of GAPDH. Expression of both PKM2 and GPI is increased in 3MC induced tumor compared with the normal tissue. In presence of 1 mM MG, association of GAPDH with PKM2 or GPI is not perturbed, but the enzymatic activity of GAPDH is reduced to 26.8 ± 5 % in 3MC induced tumor and 57.8 ± 2.3 % in EAC cells. Treatment of MG to purified GAPDH complex leads to glycation at R399 residue of PKM2 only, and changes the secondary structure of the protein complex. Conclusion PKM2 may regulate the enzymatic activity of GAPDH. Increased enzymatic activity of GAPDH in tumor cells may be attributed to its association with PKM2 and GPI. Association of GAPDH with PKM2 and GPI could be a signature for cancer cells. Glycation at R399 of PKM2 and changes in the secondary structure of GAPDH complex could be one of the mechanisms by which GAPDH activity is inhibited in tumor cells by MG. Electronic supplementary material The online version of this article (doi:10.1186/s12885-016-2172-x) contains supplementary material, which is available to authorized users.
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- 2016
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15. Surface properties and scaling behavior of a generalized ballistic deposition model
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Baisakhi Mal, J. Shamanna, and Subhankar Ray
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Surface (mathematics) ,Materials science ,Competitive growth ,Ranging ,Mechanics ,01 natural sciences ,Ballistic deposition ,010305 fluids & plasmas ,Classical mechanics ,0103 physical sciences ,Deposition (phase transition) ,Sticking probability ,010306 general physics ,Porosity ,Scaling - Abstract
The surface exponents, scaling behavior, and bulk porosity of a generalized ballistic deposition (GBD) model are studied. In nature, there exist particles with varying degrees of stickiness ranging from completely nonsticky to fully sticky. Such particles may adhere to any one of the successively encountered surfaces, depending on a sticking probability that is governed by the underlying stochastic mechanism. The microscopic configurations possible in this model are much larger than those allowed in existing models of ballistic deposition and competitive growth models that seek to mix ballistic and random deposition processes. In this article, we find the scaling exponents for surface width and porosity for the proposed GBD model. In terms of scaled width W[over ̃] and scaled time t[over ̃], the numerical data collapse onto a single curve, demonstrating successful scaling with sticking probability p and system size L. Similar scaling behavior is also found for the porosity.
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- 2016
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16. Methylglyoxal induces mitochondria-dependent apoptosis in sarcoma
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Manju Ray, Soumen Bera, T. Banerjee, Subhankar Ray, and Ashutosh Ghosh
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Apoptosis ,Biology ,Mitochondrion ,Microscopy, Atomic Force ,Biochemistry ,Rhodamine 123 ,Mice ,chemistry.chemical_compound ,Oxygen Consumption ,Western blot ,Cell Line, Tumor ,medicine ,Animals ,Membrane Potential, Mitochondrial ,medicine.diagnostic_test ,Cytochrome c ,Methylglyoxal ,Cytochromes c ,Skeletal muscle ,Sarcoma ,General Medicine ,Pyruvaldehyde ,Molecular biology ,Mitochondria ,Cell biology ,medicine.anatomical_structure ,chemistry ,Cell culture ,biology.protein ,Female ,Methylcholanthrene - Abstract
In the preceding paper (A. Ghosh et al. (2011) Biochemistry (Moscow), 76, 1051-1060), using several comparable tissue materials, it has been convincingly demonstrated that methylglyoxal, a normal metabolite, inhibits mitochondrial complex I of specifically malignant cells. This suggests a distinct alteration of complex I, a highly important enzyme for energy (ATP) production, in malignancy. The present paper shows that as a consequence of this inhibition mitochondrial membrane potential is drastically reduced in sarcoma tissue but not in normal skeletal muscle. This was estimated spectrofluorimetrically using the dye rhodamine 123. As a consequence, cytochrome c was released from the sarcoma mitochondria as evidenced by Western blot analysis. Moreover, on treatment with methylglyoxal membrane potential collapse of sarcoma 180 cells was also indicated by fluorescence-activated cell sorter analysis. Atomic force microscopic study demonstrated gross structural alteration specifically of tumor mitochondria on methylglyoxal treatment. All these studies suggest that methylglyoxal might initiate an apoptotic event in malignant cells.
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- 2011
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17. A short review on creatine–creatine kinase system in relation to cancer and some experimental results on creatine as adjuvant in cancer therapy
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Subhankar Ray, Manju Ray, Theo Wallimann, Dipa Talukdar, Subrata Patra, Soumya Sinha Roy, Manju Das, Alok Ghosh, and Soumen Bera
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Amidinotransferases ,medicine.medical_specialty ,Clinical Biochemistry ,Antineoplastic Agents ,Ascorbic Acid ,Biology ,Creatine ,Biochemistry ,Phosphocreatine ,Ehrlich ascites carcinoma ,Mice ,chemistry.chemical_compound ,Internal medicine ,medicine ,Animals ,Humans ,Muscle, Skeletal ,Creatine Kinase ,Muscle Neoplasms ,Organic Chemistry ,Methylglyoxal ,Membrane Transport Proteins ,Skeletal muscle ,Sarcoma ,Pyruvaldehyde ,Ascorbic acid ,Guanidinoacetate N-methyltransferase ,Cell Transformation, Neoplastic ,Endocrinology ,medicine.anatomical_structure ,chemistry ,biology.protein ,Guanidinoacetate N-Methyltransferase ,Creatine kinase - Abstract
The creatine/creatine kinase (CK) system plays a key role in cellular energy buffering and transport. In vertebrates, CK has four isoforms expressed in a tissue-specific manner. In the process of creatine biosynthesis several other important metabolites are formed. The anticancer effect of creatine had been reported in the past, and recent literature has reported low creatine content in several types of malignant cells. Furthermore, creatine can protect cardiac mitochondria from the deleterious effects of some anticancer compounds. Previous work from our laboratory showed progressive decrease of phosphocreatine, creatine and CK upon transformation of skeletal muscle into sarcoma. It was convincingly demonstrated that prominent expression of creatine-synthesizing enzymes L-arginine: glycine amidinotransferase and N-guanidinoacetate methyltransferase occurs in sarcoma, Ehrlich ascites carcinoma and sarcoma 180 cells; whereas, both these enzymes are virtually undetectable in skeletal muscle. Creatine transporter also remained unaltered in malignant cells. The anticancer effect of methylglyoxal had been known for a long time. The present work shows that this anticancer effect of methylglyoxal is significantly augmented in presence of creatine. On creatine supplementation the effect of methylglyoxal plus ascorbic acid was further augmented and there was no visible sign of tumor. Moreover, creatine and CK, which were very low in sarcoma tissue, were significantly elevated with the concomitant regression of tumor.
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- 2011
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18. Methylglyoxal destroys Agrobacterium tumefaciens crown gall tumours in Nicotiana tabacum without any adverse effect on the host plant
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C. Roy, D. N. Sengupta, M. Mazumder, Manju Ray, Subhankar Ray, and A. Ray
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Cisplatin ,biology ,Nicotiana tabacum ,fungi ,Crown (botany) ,Methylglyoxal ,food and beverages ,Plant Science ,Agrobacterium tumefaciens ,Horticulture ,biology.organism_classification ,Microbiology ,chemistry.chemical_compound ,chemistry ,Biochemistry ,In vivo ,medicine ,Gall ,medicine.drug ,Ellagic acid - Abstract
Methylglyoxal (MG) is a highly reactive α-oxoaldehyde, demonstrating anticancer effect on plant neoplastic tumours. In in vivo studies it was observed that MG destroyed crown gall tumours in Nicotiana tabacum produced by Agrobacterium tumefaciens, without any adverse effect on the host. The efficacy of MG in comparison to other anticancer drugs viz. cisplatin and ellagic acid in the treatment of crown gall was investigated. A slight degeneration of galls was noted in plants treated with cisplatin and ellagic acid but the plants died subsequently. With MG however, crown galls were completely cured and the plants completed their usual life cycle by flowering and producing seeds. MG inhibited the respiration of crown gall calluses suggesting that energy depletion resulted in tumour destruction.
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- 2011
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19. Effect of selective coating on the top heat loss characteristics of trapezoidal cavity: a computational approach
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Swarup K. Mahapatra, Sudhansu S. Sahoo, Subhankar Ray, and Arun Kumar Tripathy
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Materials science ,Coating ,010401 analytical chemistry ,engineering ,Heat losses ,02 engineering and technology ,engineering.material ,Composite material ,021001 nanoscience & nanotechnology ,0210 nano-technology ,01 natural sciences ,0104 chemical sciences - Published
- 2018
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20. Critical evaluation of toxic versus beneficial effects of methylglyoxal
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Dipa Talukdar, Manju Ray, B. S. Chaudhuri, and Subhankar Ray
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Glycation End Products, Advanced ,Protein Folding ,Saccharomyces cerevisiae Proteins ,Arginine ,Protein Conformation ,Lysine ,Saccharomyces cerevisiae ,Biochemistry ,Cataract ,Diabetes Mellitus, Experimental ,chemistry.chemical_compound ,Drug Delivery Systems ,In vivo ,Glycation ,medicine ,Animals ,Humans ,Serum Albumin ,chemistry.chemical_classification ,Methylglyoxal ,General Medicine ,Pyruvaldehyde ,medicine.disease ,Uremia ,In vitro ,Maillard Reaction ,Oxidative Stress ,Enzyme ,Diabetes Mellitus, Type 2 ,chemistry ,Kidney Failure, Chronic - Abstract
In various organisms, an array of enzymes is involved in the synthesis and breakdown of methylglyoxal. Through these enzymes, it is intimately linked to several other physiologically important metabolites, suggesting that methylglyoxal has some important role to play in the host organism. Several in vitro and in vivo studies showed that methylglyoxal acts specifically against different types of malignant cells. These studies culminated in a recent investigation to evaluate a methylglyoxal-based formulation in treating a small group of cancer patients, and the results were promising. Methylglyoxal acts against a number of pathogenic microorganisms. However, recent literature abounds with the toxic effects of methylglyoxal, which are supposed to be mediated through methylglyoxal-derived advanced glycation end products (AGE). Many diseases such as diabetes, cataract formation, hypertension, and uremia are proposed to be intimately linked with methylglyoxal-derived AGE. However methylglyoxal-derived AGE formation and subsequent pathogenesis might be a very minor event because AGE are nonspecific reaction products that are derived through the reactions of carbonyl groups of reducing sugars with amino groups present in the side chains of lysine and arginine and in terminal amino groups of proteins. Moreover, the results of some in vitro experiments with methylglyoxal under non-physiological conditions were extrapolated to the in vivo situation. Some experiments even showed contradictory results and were differently interpreted. For this reason conclusions about the potential beneficial effects of methylglyoxal have often been neglected, thus hindering the advancement of medical science and causing some confusion in fundamental understanding. Overall, the potential beneficial effects of methylglyoxal far outweigh its possible toxic role in vivo, and it should be utilized for the benefit of suffering humanity.
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- 2009
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21. Enzymes of creatine biosynthesis, arginine and methionine metabolism in normal and malignant cells
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Theo Wallimann, Subhankar Ray, Soumen Bera, and Manju Ray
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medicine.medical_specialty ,Creatinine ,biology ,Kidney metabolism ,Creatine transport ,Cell Biology ,Creatine ,Biochemistry ,Phosphocreatine ,Ehrlich ascites carcinoma ,Arginase ,chemistry.chemical_compound ,Endocrinology ,chemistry ,Internal medicine ,biology.protein ,medicine ,Creatine kinase ,Molecular Biology - Abstract
The creatine/creatine kinase system decreases drastically in sarcoma. In the present study, an investigation of catalytic activities, western blot and mRNA expression unambiguously demonstrates the prominent expression of the creatine-synthesizing enzymes l-arginine:glycine amidinotransferase and N-guanidinoacetate methyltransferase in sarcoma, Ehrlich ascites carcinoma and Sarcoma 180 cells, whereas both enzymes were virtually undetectable in normal muscle. Compared to that of normal animals, these enzymes remained unaffected in the kidney or liver of sarcoma-bearing mice. High activity and expression of mitochondrial arginase II in sarcoma indicated increased ornithine formation. Slightly or moderately higher levels of ornithine, guanidinoacetate and creatinine were observed in sarcoma compared to muscle. Despite the intrinsically low level of creatine in Ehrlich ascites carcinoma and Sarcoma 180 cells, these cells could significantly take up and release creatine, suggesting a functional creatine transport, as verified by measuring mRNA levels of creatine transporter. Transcript levels of arginase II, ornithine-decarboxylase, S-adenosyl-homocysteine hydrolase and methionine-synthase were significantly upregulated in sarcoma and in Ehrlich ascites carcinoma and Sarcoma 180 cells. Overall, the enzymes related to creatine and arginine/methionine metabolism were found to be significantly upregulated in malignant cells. However, the low levels of creatine kinase in the same malignant cells do not appear to be sufficient for the building up of an effective creatine/phosphocreatine pool. Instead of supporting creatine biosynthesis, l-arginine:glycine amidinotransferase and N-guanidinoacetate methyltransferase appear to be geared to support cancer cell metabolism in the direction of polyamine and methionine synthesis because both these compounds are in high demand in proliferating cancer cells.
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- 2008
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22. Progressive decrease of phosphocreatine, creatine and creatine kinase in skeletal muscle upon transformation to sarcoma
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Soumen Bera, Sarani Ghoshal, Abhimanyu Basu, Manju Ray, Subrata Patra, Uwe Schlattner, Soumya SinhaRoy, Theo Wallimann, and Subhankar Ray
- Subjects
Gene isoform ,medicine.medical_specialty ,Hindlimb ,Biology ,Creatine ,Biochemistry ,Phosphocreatine ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Downregulation and upregulation ,Internal medicine ,medicine ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,Skeletal muscle ,Cell Biology ,medicine.disease ,medicine.anatomical_structure ,Endocrinology ,chemistry ,030220 oncology & carcinogenesis ,biology.protein ,Creatine kinase ,Sarcoma - Abstract
In vertebrates, phosphocreatine and ATP are continuously interconverted by the reversible reaction of creatine kinase in accordance with cellular energy needs. Sarcoma tissue and its normal counterpart, creatine-rich skeletal muscle, are good source materials to study the status of creatine and creatine kinase with the progression of malignancy. We experimentally induced sarcoma in mouse leg muscle by injecting either 3-methylcholanthrene or live sarcoma 180 cells into one hind leg. Creatine, phosphocreatine and creatine kinase isoform levels decreased as malignancy progressed and reached very low levels in the final stage of sarcoma development; all these parameters remained unaltered in the unaffected contralateral leg muscle of the same animal. Creatine and creatine kinase levels were also reduced significantly in frank malignant portions of human sarcoma and gastric and colonic adenocarcinoma compared with the distal nonmalignant portions of the same samples. In mice, immunoblotting with antibodies against cytosolic muscle-type creatine kinase and sarcomeric mitochondrial creatine kinase showed that both of these isoforms decreased as malignancy progressed. Expressions of mRNA of muscle-type creatine kinase and sarcomeric mitochondrial creatine kinase were also severely downregulated. In human sarcoma these two isoforms were undetectable also. In human gastric and colonic adenocarcinoma, brain-type creatine kinase was found to be downregulated, whereas ubiquitous mitochondrial creatine kinase was upregulated. These significantly decreased levels of creatine and creatine kinase isoforms in sarcoma suggest that: (a) the genuine muscle phenotype is lost during sarcoma progression, and (b) these parameters may be used as diagnostic marker and prognostic indicator of malignancy in this tissue.
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- 2008
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23. TORSION OF NONHOMOGENEOUS ELASTIC HALF-SPACE WITH EMBEDDED PENNY SHAPED FLAWS
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P. K. CHAUDHURI,SUBHANKAR RAY
- Subjects
lcsh:Q ,lcsh:Science - Abstract
TORSION OF NONHOMOGENEOUS ELASTIC HALF-SPACE WITH EMBEDDED PENNY SHAPED FLAWS
- Published
- 2015
24. In vivo assessment of toxicity and pharmacokinetics of methylglyoxal
- Author
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Manju Ghosh, Dipa Talukdar, Swapna Ghosh, Nivedita Bhattacharyya, Manju Ray, and Subhankar Ray
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Pharmacology ,Methylglyoxal ,Biology ,Toxicology ,Creatine ,Ascorbic acid ,In vitro ,Melatonin ,chemistry.chemical_compound ,Pharmacokinetics ,chemistry ,In vivo ,Toxicity ,medicine ,medicine.drug - Abstract
A pharmaceutical composition and treatment method to reduce the proliferation of cancerous or tumor cells, in which the combined active agents are methylglyoxal, ascorbic acid, creatine and melatonin.
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- 2006
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25. Methylglyoxal can completely replace the requirement of kinetin to induce differentiation of plantlets from some plant calluses
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Subhankar Ray, Krishnakali Roy, Manju Ray, and Srilekha De
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biology ,Physiology ,Methylglyoxal ,Plant physiology ,Dehydrogenase ,Plant Science ,Glutathione ,biology.organism_classification ,chemistry.chemical_compound ,Lactoylglutathione lyase ,chemistry ,Biochemistry ,Callus ,biology.protein ,Kinetin ,Agronomy and Crop Science ,Daucus carota - Abstract
It is well known that cytokinins, a group of plant hormones are absolutely required for the differentiation of calluses for the regeneration of plantlets through organogenesis. In the present work, it had been observed that methylglyoxal could completely replace kinetin to initiate differentiation of plantlets from calluses of Solanum nigrum and Daucus carota. Moreover, the effect of methylglyoxal was more pronounced compared to that of kinetin and the optimum concentration for methylglyoxal had been determined to be 0.5Â mM. Parallel with the differentiation of calluses to plantlets, the chlorophyll contents increased whereas the endogenous level of methylglyoxal remained unchanged. This remarkable effect of methylglyoxal in plant differentiation had been found out to be specific because some related compounds such as pyruvate and -lactate could not replace the requirement for methylglyoxal in the differentiation process. The activities of several enzymes were monitored during both methylglyoxal and kinetin-induced differentiation. The activity of the enzyme glyceraldehyde-3-phosphate dehydrogenase (NADP-dependent) involved in energy generation process in photosynthesis, increased as the differentiation proceeded. Whereas, the activities of both glucose-6-phosphate dehydrogenase and glyceraldehyde-3-phosphate dehydrogenase (NAD-dependent) decreased with differentiation. The activity of glyoxalase I, which catalyzes the conversion of methylglyoxal and glutathione to S--lactoylglutathione, decreased with differentiation. The endogenous level of glutathione showed an initial decrease followed by an increase. It appears from the results presented above, that the effect of kinetin and methylglyoxal are similar in nature, the significance of which has been discussed.
- Published
- 2004
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26. Free energy and excitation spectrum over ferromagnetic ground state for even spin Fateev–Zamolodchikov model
- Author
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Subhankar Ray
- Subjects
Physics ,Nonlinear Sciences::Exactly Solvable and Integrable Systems ,Ferromagnetism ,Dispersion relation ,Quantum mechanics ,Spectrum (functional analysis) ,General Physics and Astronomy ,Condensed Matter::Strongly Correlated Electrons ,Ground state ,Transfer matrix ,Excitation ,Spin-½ ,Bethe ansatz - Abstract
A Bethe ansatz study of Fateev–Zamolodchikov model (FZM) is undertaken for even spin system. One has to solve a coupled system of Bethe ansatz equations (BAE) involving zeroes of two families of transfer matrices. A numerical study on finite size lattices is done for identification of the different classes of solutions (strings) of Bethe ansatz equations that correspond to ferromagnetic ground state and elementary excitations. The free energy for ferromagnetic ground states and dispersion relation for elementary excitations are found.
- Published
- 2003
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27. Protective effect of creatine against inhibition by methylglyoxal of mitochondrial respiration of cardiac cells
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Swati Biswas, Soumya Sinha Roy, Manju Ray, and Subhankar Ray
- Subjects
medicine.medical_specialty ,Cardiotonic Agents ,Phosphocreatine ,Cell Respiration ,Creatine Kinase, Mitochondrial Form ,Mitochondrion ,Creatine ,Biochemistry ,Mitochondria, Heart ,Mice ,chemistry.chemical_compound ,Lactoylglutathione lyase ,Oxygen Consumption ,Internal medicine ,Tumor Cells, Cultured ,medicine ,Animals ,Urea ,Carcinoma, Ehrlich Tumor ,Creatine Kinase ,Molecular Biology ,Heart metabolism ,Mercaptoethanol ,Creatinine ,Dose-Response Relationship, Drug ,Glutathione Disulfide ,biology ,Goats ,Methylglyoxal ,Lactoylglutathione Lyase ,Heart ,Cell Biology ,Glutathione ,Pyruvaldehyde ,Mitochondria, Muscle ,Rats ,Isoenzymes ,Endocrinology ,chemistry ,biology.protein ,Dinitrofluorobenzene ,Creatine kinase ,Chickens ,Glycolysis ,Research Article - Abstract
Previous publications from our laboratory have shown that methylglyoxal inhibits mitochondrial respiration of malignant and cardiac cells, but it has no effect on mitochondrial respiration of other normal cells [Biswas, Ray, Misra, Dutta and Ray (1997) Biochem. J. 323, 343–348; Ray, Biswas and Ray (1997) Mol. Cell. Biochem. 171, 95–103]. However, this inhibitory effect of methylglyoxal is not significant in cardiac tissue slices. Moreover, post-mitochondrial supernatant (PMS) of cardiac cells could almost completely protect the mitochondrial respiration against the inhibitory effect of methylglyoxal. A systematic search indicated that creatine present in cardiac cells is responsible for this protective effect. Glutathione has also some protective effect. However, creatine phosphate, creatinine, urea, glutathione disulphide and β-mercaptoethanol have no protective effect. The inhibitory and protective effects of methylglyoxal and creatine respectively on cardiac mitochondrial respiration were studied with various concentrations of both methylglyoxal and creatine. Interestingly, neither creatine nor glutathione have any protective effect on the inhibition by methylglyoxal on the mitochondrial respiration of Ehrlich ascites carcinoma cells. The creatine and glutathione contents of several PMS, which were tested for the possible protective effect, were measured. The activities of two important enzymes, namely glyoxalase I and creatine kinase, which act upon glutathione plus methylglyoxal and creatine respectively, were also measured in different PMS. Whether mitochondrial creatine kinase had any role in the protective effect of creatine had also been investigated using 1-fluoro-2,4-dinitrobenzene, an inhibitor of creatine kinase. The differential effect of creatine on mitochondria of cardiac and malignant cells has been discussed with reference to the therapeutic potential of methylglyoxal.
- Published
- 2003
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28. Effects of an axisymmetric rigid punch on a nonhomogeneous transversely isotropic half-space
- Author
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Partha Chaudhuri and Subhankar Ray
- Subjects
symbols.namesake ,Mathematics (miscellaneous) ,Distribution (mathematics) ,Homogeneous ,Transverse isotropy ,Mathematical analysis ,Rotational symmetry ,symbols ,Fredholm integral equation ,Half-space ,Integral equation ,Action (physics) ,Mathematics - Abstract
Elastic behaviour of a nonhomogeneous transversely isotropic half-space is studied under the action of a smooth rigid axisymmetric indentor. Hankel transforms of different orders have been used. It is observed that in contrast to a homogeneous medium, the pressure distribution in the contact region in a nonhomogeneous medium is not directly available, rather it is obtainable from the solution of a Fredholm integral equation. The integral equation is solved for a flat-ended punch and paraboloidal indentations for various values of the nonhomogeneity parameter, and the effects of nonhomogeneity in elastic behaviour on stresses have been shown graphically. The results of the associated homogeneous case are readily available from the results of the present study.
- Published
- 2003
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29. Surface morphology of a modified ballistic deposition model
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Kasturi Banerjee, Subhankar Ray, and J. Shamanna
- Subjects
Materials science ,Statistical Mechanics (cond-mat.stat-mech) ,Condensed matter physics ,Surface Properties ,FOS: Physical sciences ,Condensed Matter - Soft Condensed Matter ,Models, Theoretical ,Granular material ,Ballistic deposition ,Condensed Matter::Soft Condensed Matter ,symbols.namesake ,symbols ,Coulomb ,Soft Condensed Matter (cond-mat.soft) ,Computer Simulation ,van der Waals force ,Saturation (chemistry) ,Porous medium ,Porosity ,Condensed Matter - Statistical Mechanics ,Rate of growth - Abstract
The surface and bulk properties of a modified ballistic deposition model are investigated. The deposition rule interpolates between nearest and next-nearest neighbor ballistic deposition and the random deposition models. The stickiness of the depositing particle is controlled by a parameter and the type of inter-particle force. Two such forces are considered - Coulomb and van der Waals type. The interface width shows three distinct growth regions before eventual saturation. The rate of growth depends more strongly on the stickiness parameter than on the type of inter-particle force. However, the porosity of the deposits is strongly influenced by the inter-particle force., 6 pages, 17 figures
- Published
- 2014
30. Identification of a critical lysine residue at the active site in glyceraldehyde-3-phosphate dehydrogenase of Ehrlich ascites carcinoma cell
- Author
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Kasturi Mukherjee, S. K. Ghosh, Subhankar Ray, and Manju Ray
- Subjects
Molecular Sequence Data ,Lysine ,Dithionitrobenzoic Acid ,Dehydrogenase ,In Vitro Techniques ,Biochemistry ,Ehrlich ascites carcinoma ,Mice ,chemistry.chemical_compound ,Catalytic Domain ,Animals ,Amino Acid Sequence ,Enzyme Inhibitors ,Pyridoxal phosphate ,Carcinoma, Ehrlich Tumor ,Glyceraldehyde 3-phosphate dehydrogenase ,chemistry.chemical_classification ,biology ,Muscles ,Active site ,Molecular biology ,Kinetics ,Protein Subunits ,Enzyme ,Trinitrobenzenesulfonic Acid ,chemistry ,Pyridoxal Phosphate ,biology.protein ,Rabbits ,NAD+ kinase ,Glyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating) - Abstract
The involvement of the lysine residue present at the active site of Ehrlich ascites carcinoma (EAC) cell glyceraldehyde-3-phosphate dehydrogenase (Gra3PDH) was investigated by using the lysine specific reagents trinitrobenzenesulfonic acid (TNBS) and pyridoxal phosphate (PP). Both TNBS and PP inactivated EAC cell Gra3PDH with pseudo-first-order kinetics with the rate dependent on modifier concentration. Kinetic analysis, including a Tsou plot, indicated that both TNBS and PP apparently react with one lysine residue per enzyme molecule. Two of the substrates, d-glyceraldehyde-3-phosphate and NAD, and also NADH, the product and competitive inhibitor, almost completely protected the enzyme from inactivation by TNBS. A comparative study of Gra3PDH of EAC cell and rabbit muscle indicates that the nature of active site of the enzyme is significantly different in these two cells. A double inhibition study using 5,5'-dithiobis(2-nitrobenzoic acid) and TNBS and subsequent reactivation of only the rabbit muscle enzyme by dithiothreitol suggested that a cysteine residue of this enzyme possibly reacts with TNBS. These studies on the other hand, confirm that an essential lysine residue is involved in the catalytic activity of the EAC cell enzyme. This difference in the nature of the active site of EAC cell Gra3PDH that may be related to the high glycolysis of malignant cells has been discussed.
- Published
- 2001
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31. Glyceraldehyde-3-phosphate dehydrogenase from Ehrlich ascites carcinoma cells. Its possible role in the high glycolysis of malignant cells
- Author
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Swapna Bagui, Manju Ray, and Subhankar Ray
- Subjects
Cell ,Dehydrogenase ,Biochemistry ,Substrate Specificity ,Ehrlich ascites carcinoma ,Adenosine Triphosphate ,Enzyme Stability ,medicine ,Animals ,Malignant cells ,Glycolysis ,Enzyme Inhibitors ,Carcinoma, Ehrlich Tumor ,Glyceraldehyde 3-phosphate dehydrogenase ,chemistry.chemical_classification ,biology ,Glyceraldehyde-3-Phosphate Dehydrogenases ,Hydrogen-Ion Concentration ,Chromatography, Ion Exchange ,NAD ,Molecular biology ,Molecular Weight ,Kinetics ,medicine.anatomical_structure ,Enzyme ,chemistry ,biology.protein ,Electrophoresis, Polyacrylamide Gel ,Specific activity ,Rabbits ,NADP - Abstract
Glyceraldehyde-3-phosphate dehydrogenase has been purified to apparent homogeneity from Ehrlich ascites carcinoma (EAC) cells. The enzyme is quite active over a pH range of 7.5-9.0 with an optimum pH of 8.4-8.7. The specific activity of the enzyme is much higher than that from other normal sources. In contrast to enzyme obtained from rabbit muscle, the EAC cell enzyme is not significantly inhibited by physiological concentrations of ATP at physiological pH. Kinetic studies using different substrates and inhibitors indicate that the properties of the EAC cell enzyme are significantly different from those of glyceraldehyde-3-phosphate dehydrogenase obtained from other normal sources. The striking dissimilarity of the malignant cell glyceraldehyde-3-phosphate dehydrogenase compared with this enzyme from other normal sources, particularly in respect to the interaction with ATP, may in part explain the high glycolysis of malignant cells.
- Published
- 1999
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32. Self-organized critical dynamics of a directed bond percolation model
- Author
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J. Shamanna, Tapati Dutta, and Subhankar Ray
- Subjects
Physics ,Statistical Mechanics (cond-mat.stat-mech) ,Spacetime ,Galilean invariance ,Dynamics (mechanics) ,FOS: Physical sciences ,General Physics and Astronomy ,Condensed Matter - Soft Condensed Matter ,Power law ,Percolation ,Soft Condensed Matter (cond-mat.soft) ,Probability distribution ,Statistical physics ,Algebraic number ,Constant (mathematics) ,Condensed Matter - Statistical Mechanics - Abstract
We study roughening interfaces with a constant slope that become self organized critical by a rule that is similar to that of invasion percolation. The transient and critical dynamical exponents show Galilean invariance. The activity along the interface exhibits non-trivial power law correlations in both space and time. The probability distribution of the activity pattern follows an algebraic relation., 5 journal pages, 4 figures
- Published
- 1998
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33. Comment on ‘Looking back into Bohr's atom’
- Author
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Subhankar Ray and J. Shamanna
- Subjects
Physics ,symbols.namesake ,Theoretical physics ,Quantum mechanics ,Atom (measure theory) ,symbols ,General Physics and Astronomy ,Bhattacharyya distance ,Bohr model - Abstract
It is shown that, in the article 'Looking back into Bohr's atom', Bhattacharyya (2006 Eur. J. Phys. 27 497–500) has made several redundant assumptions for arriving at rather restrictive results. The article also uses certain approximations, which do not follow from the assumptions made therein.
- Published
- 2006
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34. Selective inhibition of mitochondrial respiration and glycolysis in human leukaemic leucocytes by methylglyoxal
- Author
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D. Dutta, Swati Biswas, Sanjoy Misra, Subhankar Ray, and Manju Ray
- Subjects
Adult ,Male ,Adolescent ,Cellular respiration ,Cell Respiration ,Succinic Acid ,Mitochondrion ,Biology ,Biochemistry ,chemistry.chemical_compound ,Adenosine Triphosphate ,Oxygen Consumption ,Leukocytes ,Humans ,Glycolysis ,Child ,Molecular Biology ,Aldehydes ,Leukemia ,Methylglyoxal ,Succinates ,Cell Biology ,Middle Aged ,NAD ,Pyruvaldehyde ,Mitochondria ,Mitochondrial respiratory chain ,chemistry ,Ketoglutaric Acids ,Female ,NAD+ kinase ,Lactaldehyde ,Adenosine triphosphate ,Research Article - Abstract
The effect of methylglyoxal on the oxygen consumption of mitochondria of both normal and leukaemic leucocytes was tested by using different respiratory substrates and complex specific artificial electron donors and inhibitors. The results indicate that methylglyoxal strongly inhibits mitochondrial respiration in leukaemic leucocytes, whereas, at a much higher concentration, methylglyoxal fails to inhibit mitochondrial respiration in normal leucocytes. Methylglyoxal strongly inhibits ADP-stimulated α-oxoglutarate and malate plus NAD+-dependent respiration, whereas, at a higher concentration, methylglyoxal fails to inhibit succinate and α-glycerophosphate-dependent respiration. Methylglyoxal also fails to inhibit respiration which is initiated by duroquinone and cannot inhibit oxygen consumption when the N,N,N´,N´-tetramethyl-p-phenylenediamine by-pass is used. NADH oxidation by sub-mitochondrial particles of leukaemic leucocytes is also inhibited by methylglyoxal. Lactaldehyde, a catabolite of methylglyoxal, can exert a protective effect on the inhibition of leukaemic leucocyte mitochondrial respiration by methylglyoxal. Methylglyoxal also inhibits l-lactic acid formation by intact leukaemic leucocytes and critically reduces the ATP level of these cells, whereas methylglyoxal has no effect on normal leucocytes. We conclude that methylglyoxal inhibits glycolysis and the electron flow through mitochondrial complex I of leukaemic leucocytes. This is strikingly similar to our previous studies on mitochondrial respiration, glycolysis and ATP levels in Ehrlich ascites carcinoma cells [Ray, Dutta, Halder and Ray (1994) Biochem. J. 303, 69–72; Halder, Ray and Ray (1993) Int. J. Cancer 54, 443–449], which strongly suggests that the inhibition of electron flow through complex I of the mitochondrial respiratory chain and inhibition of glycolysis by methylglyoxal may be common characteristics of all malignant cells.
- Published
- 1997
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35. Bethe ansatz study for ground state of Fateev Zamolodchikov model
- Author
-
Subhankar Ray
- Subjects
Physics ,Transcendental equation ,Lattice field theory ,Statistical and Nonlinear Physics ,Transfer matrix ,Bethe ansatz ,High Energy Physics::Theory ,Nonlinear Sciences::Exactly Solvable and Integrable Systems ,Quantum mechanics ,Transfer-matrix method ,Condensed Matter::Strongly Correlated Electrons ,Ground state ,Mathematical Physics ,Spin-½ ,Potts model ,Mathematical physics - Abstract
A Bethe ansatz study of a self-dual ZN spin lattice model, originally proposed by V. A. Fateev and A. B. Zamolodchikov, is undertaken. The connection of this model to the Chiral Potts model is established. Transcendental equations connecting the zeros of Fateev–Zamolodchikov transfer matrix are derived. The free energies for the ferromagnetic and the anti-ferromagnetic ground states are found for both even and odd spins.
- Published
- 1997
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36. [Untitled]
- Author
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Manju Ray, Subhankar Ray, and Swati Biswas
- Subjects
biology ,Clinical Biochemistry ,Methylglyoxal ,Cell Biology ,General Medicine ,Toad ,Mitochondrion ,Ehrlich ascites carcinoma ,chemistry.chemical_compound ,Mitochondrial respiratory chain ,chemistry ,Biochemistry ,biology.animal ,Respiration ,Respiratory system ,Lactaldehyde ,Molecular Biology - Abstract
The effect of methylglyoxal on the oxygen consumption of mitochondria of heart and of several other organs of normal animals of different species has been tested. The results indicate that methylglyoxal (3.5 mM) strongly inhibits ADP-stimulated α-oxoglutarate and malate plus pyruvate-dependent respiration of exclusively heart mitochondria of normal animals of different species. Whereas, with the same substrates, but at a higher concentration of methylglyoxal (7.5 mM), the respiration of mitochondria of other organs of normal animals is not inhibited. Methylglyoxal also inhibits the respiration of slices of rat and toad hearts. But this inhibition is less pronounced. However, methylglyoxal (15 mM) fails to have any effect on perfused toad heart. Using rat heart mitochondria as a model, the effect of methylglyoxal on the oxygen consumption was also tested with different respiratory substrates, electron donors at different segments of the mitochondrial respiratory chain and site-spe inhibitors to identify the specific respiratory complex which might be involved in the inhibitory effect of methylglyoxal. The results strongly suggest that methylglyoxal inhibits the electron flow through complex I of rat heart mitochondrial respiratory chain. Moreover, lactaldehyde (0.6 mM), a catabolite of methylglyoxal, can exert a protective effect on the inhibition of rat heart mitochondrial respiration by methylglyoxal (2.5 mM). The effect of methylglyoxal on heart mitochondria as described in the present paper is strikingly similar to the results of our previous work with mitochondria of Ehrlich ascites carcinoma cells and leukemic leukocytes. We have recently proposed a new hypothesis on cancer which suggests that excessive ATP formation in cells may lead to malignancy. The above mentioned similarity apparently provides a solid experimental foundation for the proposed hypothesis which has been discussed.
- Published
- 1997
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37. [Untitled]
- Author
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Manju Ray, Nandita Basu, and Subhankar Ray
- Subjects
chemistry.chemical_classification ,biology ,Clinical chemistry ,Clinical Biochemistry ,Methylglyoxal ,Dehydrogenase ,Cell Biology ,General Medicine ,Malignancy ,medicine.disease ,Molecular biology ,Enzyme activator ,chemistry.chemical_compound ,Enzyme ,chemistry ,Biochemistry ,biology.protein ,medicine ,Molecular Biology ,Gene ,Glyceraldehyde 3-phosphate dehydrogenase - Abstract
The effect of methylglyoxal on the activity of glyceraldehyde-3-phosphate dehydrogenase (GA3PD) of several normal human tissues and benign and malignant tumors has been tested. Methylglyoxal inactivated GA3PD of all the malignant cells (47 samples) and the degree of inactivation was in the range of 25-90%, but it had no inhibitory effect on this enzyme from several normal cells (24 samples) and benign tumors (13 samples). When the effect of methylglyoxal on other two dehydrogenases namely glucose 6-phosphate dehydrogenase (G6PD) and L-lactic dehydrogenase (LDH) of similar cells was tested as controls it has been observed that methylglyoxal has some inactivating effect on G6PD of all the normal, benign and malignant samples tested, whereas, LDH remained completely unaffected. These studies indicate that the inactivating effect of methylglyoxal on GA3PD specifically of the malignant cells may be a common feature of all the malignant cells, and this phenomenon can be used as a simple and rapid device for the detection of malignancy.
- Published
- 1997
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38. Classification and completeness of Bethe states and excitation spectrum for the spin 4 Fateev-Zamolodchikov model
- Author
-
Subhankar Ray
- Subjects
Physics ,Spectrum (functional analysis) ,General Physics and Astronomy ,Bethe ansatz ,High Energy Physics::Theory ,Simple (abstract algebra) ,Completeness (order theory) ,Quantum mechanics ,Condensed Matter::Strongly Correlated Electrons ,Special case ,Ground state ,Excitation ,Mathematical physics ,Spin-½ - Abstract
The classification and completeness of Bethe states is undertaken for the spin 4 Fateev-Zamolodchikov model. This special case is of particular interest as the energy can be derived in a simple closed form even for lattices of arbitrary finite size. The excitation spectrum over the ferromagnetic ground state is also derived.
- Published
- 1996
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39. The Fateev-Zamolodchikov model: an exact calculation for spin N = 4
- Author
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Subhankar Ray
- Subjects
Physics ,Thirring model ,Chiral Potts model ,General Physics and Astronomy ,Decoupling (cosmology) ,Bethe ansatz ,High Energy Physics::Theory ,Nonlinear Sciences::Exactly Solvable and Integrable Systems ,Lattice (order) ,Quantum mechanics ,Condensed Matter::Strongly Correlated Electrons ,Ground state ,Central charge ,Mathematical physics - Abstract
A Bethe ansatz study of the Fateev-Zamolodchikov model is undertaken for the spin N = 4 system. A complete decoupling of the Bethe equations allows a closed explicit expression for the ground state energy even for a finite lattice. A central charge is extracted by a straightforward expansion.
- Published
- 1996
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40. Purification and characterization of 3-phosphoglycerate kinase from Ehrlich ascites carcinoma cells
- Author
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Kasturi, Mukherjee, Swapna, Ghosh, Manju, Ray, and Subhankar, Ray
- Subjects
Manganese ,Nucleic Acid Hybridization ,Hydrogen-Ion Concentration ,Chromatography, Ion Exchange ,Gene Expression Regulation, Enzymologic ,Adenosine Diphosphate ,Gene Expression Regulation, Neoplastic ,Kinetics ,Mice ,Phosphoglycerate Kinase ,Adenosine Triphosphate ,Chromatography, Gel ,Animals ,Magnesium ,Carcinoma, Ehrlich Tumor ,Edetic Acid ,Neoplasm Transplantation ,Mercaptoethanol - Abstract
3-Phosphoglycerate kinase (3-PGK) has been purified to apparent homogeneity from Ehrlich ascites carcinoma (EAC) cells by (NH4)2SO4 precipitation, gel filtration and ion-exchange chromatography. The enzyme has been partially characterized and compared with the characteristics of this enzyme of other normal and malignant cells. The EAC cell 3-PGK is composed of a single subunit of 47 kDa. It has a broad pH optimum (pH 6.0-7.5) for its enzymatic activity. The apparent Km values of 3-phosphoglycerate (3-PGA) and ATP for 3-PGK have been found out to be 0.25 mM and 0.1 mM respectively. Similar to 3-PGK of other cells, the EAC enzyme requires either Mg2+ or Mn2+ for full activity; the optimum concentrations of Mg2+ and Mn2+ are 0.8 mM and 0.5 mM respectively. When ATP and 3-PGA act as substrates, ADP, the reaction product of 3-PGK-catalyzed reaction has been found to inhibit this enzyme. Kinetic studies were made on the inhibition of ADP in presence of the substrates ATP and 3-PGA. Attempts to hybridize 3-PGK and glyceraldehyde-3-phosphate dehydrogenase of EAC cells by NAD or glutaraldehyde were unsuccessful.
- Published
- 2012
41. Evidence for the presence of a critical histidine residue at the active site in glyceraldehyde-3-phosphate dehydrogenase of Ehrlich ascites carcinoma cells
- Author
-
Swapna, Ghosh, Manju, Ray, and Subhankar, Ray
- Subjects
Kinetics ,Mice ,Catalytic Domain ,Diethyl Pyrocarbonate ,Animals ,Dithionitrobenzoic Acid ,Histidine ,Hydroxylamine ,Glyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating) ,Hydrogen-Ion Concentration ,Carcinoma, Ehrlich Tumor ,Gene Expression Regulation, Enzymologic - Abstract
Ehrlich ascites carcinoma (EAC) cell glyceraldehyde-3-phosphate dehydrogenase (GA3PD) (EC. 1.2.1.12) was completely inactivated by diethyl pyrocarbonate (DEPC), a fairly specific reagent for histidine residues in the pH range of 6.0-7.5. The rate of inactivation was dependent on pH and followed pseudo-first order reaction kinetics. The difference spectrum of the inactivated and native enzymes showed an increase in the absorption maximum at 242 nm, indicating the modification of histidine residues. Statistical analysis of the residual enzyme activity and the extent of modification indicated modification of one essential histidine residue to be responsible for loss of the catalytic activity of EAC cell GA3PD. DEPC inactivation was protected by substrates, D-glyceraldehyde-3-phosphate and NAD, indicating the presence of essential histidine residue at the substrate-binding region of the active site. Double inhibition studies also provide evidence for the presence of histidine residue at the active site.
- Published
- 2012
42. Differential inhibition/inactivation of mitochondrial complex I implicates its alteration in malignant cells
- Author
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Suman Ghosal, Soumen Bera, Anirban Basu, Ashutosh Ghosh, Manju Ray, and Subhankar Ray
- Subjects
Adult ,Male ,Down-Regulation ,Biochemistry ,chemistry.chemical_compound ,Mice ,Young Adult ,Neoplasms ,medicine ,Tumor Cells, Cultured ,Animals ,Humans ,Submitochondrial particle ,Pyridoxal ,Aged ,chemistry.chemical_classification ,Aldehydes ,Electron Transport Complex I ,biology ,Methylglyoxal ,NADH dehydrogenase ,Skeletal muscle ,NADH Dehydrogenase ,General Medicine ,Middle Aged ,Pyruvaldehyde ,Molecular biology ,Mitochondria ,Enzyme ,medicine.anatomical_structure ,chemistry ,Cancer cell ,biology.protein ,Female ,Lactaldehyde - Abstract
Methylglyoxal strongly inhibited mitochondrial respiration of a wide variety of malignant tissues including sarcoma of mice, whereas no such significant effect was noted on mitochondrial respiration of normal tissues with the exception of cardiac cells. This inhibition by methylglyoxal was found to be at the level of mitochondrial complex I (NADH dehydrogenase) of the electron transport chain. L-Lactaldehyde, which is structurally and metabolically related to methylglyoxal, could protect against this inhibition. NADH dehydrogenase of submitochondrial particles of malignant and cardiac cells was inhibited by methylglyoxal. This enzyme of these cells was also inactivated by methylglyoxal. The possible involvement of lysine residue(s) for the activity of NADH dehydrogenase was also investigated by using lysine-specific reagents trinitrobenzenesulfonic acid (TNBS) and pyridoxal 5' phosphate (PP). Inactivation of NADH dehydrogenase by both TNBS and PP convincingly demonstrated the involvement of lysine residue(s) for the activity of the sarcoma and cardiac enzymes, whereas both TNBS and PP failed to inactivate the enzymes of skeletal muscle and liver. Together these studies demonstrate a specific effect of methylglyoxal on mitochondrial complex I of malignant cells and importantly some distinct alteration of this complex in cancer cells.
- Published
- 2011
43. Origin of the unconventional magnetoresistance in Sr2FeMoO6
- Author
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R. Rawat, D. D. Sarma, Luca Gregoratti, Subhankar Ray, Abhinandan Banerjee, Srimanta Middey, Somnath Jana, and Prabuddha Sanyal
- Subjects
Magnetization ,Coupling (physics) ,Condensed Matter - Materials Science ,Materials science ,Ferromagnetism ,Condensed matter physics ,Magnetoresistance ,Small volume ,General Physics and Astronomy ,Materials Science (cond-mat.mtrl-sci) ,FOS: Physical sciences ,Condensed Matter::Strongly Correlated Electrons ,Surface layer - Abstract
The unusual magnetoresistance (MR) behavior in Sr2FeMoO6, recently termed as spin-valve type MR (SVMR), presents several anomalies that are little understood so far. The difficulty in probing the origin of this phenomenon, arising from the magnetic property of only a small volume fraction of the ferromagnetic bulk, is circumvented in the present study by the use of ac susceptibility measurements that are sensitive to the slope rather than the magnitude of the magnetization. The present study unravels a spin-glass (SG) like surface layer around each soft ferromagnetic (FM) grain of Sr2FeMoO6. It is also observed that there is a very strong exchange coupling between the two, generating `exchange bias' effect, which consequently creates the `valve', responsible for the unusual MR effects., Comment: 16 pages, 6 figures
- Published
- 2011
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44. Inhibition of glycolysis and mitochondrial respiration of ehrlich ascites carcinoma cells by methylglyoxal
- Author
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Jyotsnabaran Halder, Manju Ray, and Subhankar Ray
- Subjects
Cancer Research ,Cellular respiration ,Glucose-6-Phosphate ,Dehydrogenase ,Biology ,Mitochondrion ,Ehrlich ascites carcinoma ,Mice ,chemistry.chemical_compound ,Adenosine Triphosphate ,Cytosol ,Oxygen Consumption ,Hexokinase ,Glyceraldehyde ,Tumor Cells, Cultured ,Animals ,Glycolysis ,Lactic Acid ,Carcinoma, Ehrlich Tumor ,Muscles ,Methylglyoxal ,Glucosephosphates ,Glyceraldehyde-3-Phosphate Dehydrogenases ,Pyruvaldehyde ,Mitochondria ,Enzyme Activation ,Glucose ,Oncology ,Biochemistry ,chemistry ,Anaerobic glycolysis ,Lactates ,Chickens - Abstract
The effect of methylglyoxal (MG) on the aerobic glycolysis of Ehrlich ascites carcinoma (EAC) cells has been tested. Methylglyoxal inhibited glucose utilization and glucose 6-phosphate (G6P) and L-lactate formation in whole EAC cells. Methylglyoxal strongly inactivated glyceraldehyde 3-phosphate dehydrogenase (GA3PD) of the malignant cells, whereas MG has little inactivating effect on this enzyme from several normal sources. Methylglyoxal also inactivated only the particulate hexominase of the EAC cells, but this inactivation was less pronounced than the effect on GA3PD. Methylglyoxal has little inactivating effect on glucose 6-phosphate dehydrogenase (G6PD), and no effect on L-lactate dehydrogenase (LDH) of the malignant cells. Glucose-dependent L-lactic acid formation of EAC-cell-free homogenate was strongly inhibited by MG, but when GA3PD of normal cells was added to this homogenate, significant lactate formation was observed even in the presence of MG. Methylglyoxal also inhibited the respiration of EAC-cell mitochondria. Respiration of mitochondria isolated from liver and kidney of normal mice, however, remained unaffected. As a consequence of the inhibition of glycolysis and mitochondrial respiration, the ATP level of the EAC cells was drastically reduced. Studies reported herein strongly suggest that the tumoricidal effect of MG is mediated at least in part through the inhibition of mitochondrial respiration and inactivation of GA3PD, and this enzyme may play an important role in the high glycolytic capacity of the malignant cells.
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- 1993
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45. Revisiting Surface Diffusion in Random Deposition
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Subhankar Ray, Baisakhi Mal, and J. Shamanna
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Logarithmic scale ,Surface diffusion ,Materials science ,Computer simulation ,Statistical Mechanics (cond-mat.stat-mech) ,FOS: Physical sciences ,Mechanics ,Condensed Matter - Soft Condensed Matter ,Condensed Matter Physics ,Electronic, Optical and Magnetic Materials ,Diffusion process ,Linear form ,Monolayer ,Surface roughness ,Soft Condensed Matter (cond-mat.soft) ,Linear growth ,Condensed Matter - Statistical Mechanics - Abstract
An investigation of the effect of surface diffusion in random deposition model is made by analytical methods and reasoning. For any given site, the extent to which a particle can diffuse is decided by the morphology in the immediate neighbourhood of the site. An analytical expression is derived to calculate the probability of a particle at any chosen site to diffuse to a given length, from first principles. Using the method, the probabilities for different diffusion lengths are calculated and their dependence on system size and the number of deposited layers is studied. Numerical simulation of surface diffusion in random deposition model with varying extents of diffusion are performed and their results are interpreted in the light of the analytical calculations. Thus, a clearer understanding of the diffusion process and the effect of diffusion length on surface roughness is obtained. Systems with surface diffusion show nearly random deposition-like behaviour upto monolayer deposition. Their interface widths, in a logarithmic plot, are initially linear, as in random deposition. With increase in the number of layers, correlation effects between neighbouring columns become dominant. The interface deviates from its initial linear growth and eventually becomes saturated. An explanation for this behaviour is discussed and the point of departure from the linear form is estimated analytically., Comment: 6 pages, 9 figures, updation of references; rearrangement and refinement of sections for improved logical flow
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- 2010
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46. Molecular characterization of tumor associated glyceraldehyde-3-phosphate dehydrogenase
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Soumen Bera, Subrata Patra, Manju Ray, S. K. Ghosh, Subhankar Ray, and Amrita Roy
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Cell ,Molecular Sequence Data ,Biophysics ,Biochemistry ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Ehrlich ascites carcinoma ,Mice ,stomatognathic system ,Enzyme Stability ,medicine ,Leukocytes ,Animals ,Humans ,Amino Acid Sequence ,Glyceraldehyde 3-phosphate dehydrogenase ,Cells, Cultured ,Antiserum ,biology ,Muscles ,Myeloid leukemia ,Glyceraldehyde-3-Phosphate Dehydrogenases ,Sarcoma ,General Medicine ,medicine.disease ,Molecular biology ,Rats ,Molecular Weight ,Leukemia ,Kinetics ,medicine.anatomical_structure ,Polyclonal antibodies ,Leukemia, Myeloid ,biology.protein ,Geriatrics and Gerontology - Abstract
Here we describe the purification of glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from normal leukocytes of healthy subjects and leukocytes of chronic myeloid leukemia (CML) patients and from normal mouse muscle and sarcoma tissue. The data indicate that some properties of GAPDH of leukocytes of CML patients and sarcoma tissues are similar and also similar to those of EAC (Ehrlich ascites carcinoma) cellular GAPDH but distinctly different from those of the normal cellular GAPDH. Polyclonal antiserum raised against the 54 kDa subunit of EAC cell GAPDH strongly reacted with GAPDH of leukocytes of CML patients and sarcoma tissue GAPDH only and weakly reacted with GAPDH of normal leukocyte and normal muscle and a variety of other tissues of normal rats. Both the subunits of GAPDH of sarcoma tissues were partially sequenced from the N-terminus and compared with the known sequences of GAPDH. The altered properties of GAPDH of three different malignant sources might be common feature of all malignant cells, which is discussed in relation to glycolysis and malignant aberrations.
- Published
- 2009
47. A novel D-glyceraldehyde-3-phosphate binding protein, a truncated albumin, with D-glyceraldehyde-3-phosphate dehydrogenase inhibitory property
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Soumen Bera, Subrata Patra, Manju Ray, Subhankar Ray, and Amrita Roy
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Clinical Biochemistry ,Molecular Sequence Data ,Dehydrogenase ,Biochemistry ,Glyceraldehyde 3-Phosphate ,Substrate Specificity ,Mice ,Cytosol ,Albumins ,Protein A/G ,Genetics ,Animals ,Tissue Distribution ,Amino Acid Sequence ,Fluorescent Antibody Technique, Indirect ,Muscle, Skeletal ,Molecular Biology ,chemistry.chemical_classification ,Binding Sites ,biology ,Sequence Homology, Amino Acid ,Binding protein ,Albumin ,Glyceraldehyde-3-Phosphate Dehydrogenases ,Cell Biology ,Hydrogen-Ion Concentration ,Molecular biology ,Amino acid ,Molecular Weight ,Enzyme ,chemistry ,biology.protein ,Protein G ,Carrier Proteins ,Protein Binding ,Subcellular Fractions - Abstract
We have purified a novel protein from mice muscle, which through N-terminal amino acid sequencing was identified as a truncated form of mouse albumin. The protein was found to be a monomer of ∼64 kDa and located in the cytosol. The purified protein strongly crossreacted with commercial albumin antibody. Presence of this protein was observed in different mouse organs. Further biochemical studies as well as CD spectroscopy indicated that the protein binds D-glyceraldehyde-3-phosphate limiting the availability of the substrate to the enzyme D-glyceraldehyde-3-phosphate dehydrogenase, thereby inhibiting its catalytic activity. The implication of this protein in the control of glycolysis has been discussed. © 2009 IUBMB IUBMB Life, 61(10): 995–1000, 2009
- Published
- 2009
48. Aminoacetone synthase from goat liver. Involvement of arginine residue at the active site and on the stability of the enzyme
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Subhankar Ray, D Sarkar, and Manju Ray
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Tris ,Phenylglyoxal ,Arginine ,Stereochemistry ,Glycine ,Diacetyl ,Biochemistry ,chemistry.chemical_compound ,Residue (chemistry) ,Glycine Transaminase ,Enzyme Reactivators ,Acetyl Coenzyme A ,Acetyltransferases ,Enzyme Stability ,Animals ,Magnesium ,Binding site ,Molecular Biology ,Edetic Acid ,chemistry.chemical_classification ,Binding Sites ,biology ,Goats ,Active site ,Cell Biology ,Enzyme Activation ,Enzyme ,Liver ,chemistry ,biology.protein ,Research Article - Abstract
The arginine-specific reagents phenylglyoxal and butane-2,3-dione inactivated goat liver aminoacetone synthase with pseudo-first-order kinetics, with the rate dependent on modifier concentration. Phenylglyoxal and butane-2,3-dione appeared to react with one arginine residue per enzyme molecule. The inactivated enzyme could be re-activated by Tris, suggesting additional evidence of modification of the arginine residue. Acetyl-CoA, one of the substrates, completely protected the enzyme from inactivation. Glycine gave partial protection. Protection by substrates against inactivation by phenylglyoxal and butane-2,3-dione suggested the presence of an essential arginine residue at the substrate-binding region. Experiments with [7-14C]phenylglyoxal in the presence of acetyl-CoA showed that only the arginine residue at the active site could be modified by phenylglyoxal. The stability of the enzyme is dependent on the presence of both EDTA and Mg2+.
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- 1991
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49. Enzymes of creatine biosynthesis, arginine and methionine metabolism in normal and malignant cells
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Soumen, Bera, Theo, Wallimann, Subhankar, Ray, and Manju, Ray
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Ornithine ,Amidinotransferases ,Arginase ,Adenosylhomocysteinase ,Membrane Transport Proteins ,Arginine ,Creatine ,Kidney ,Ornithine Decarboxylase ,5-Methyltetrahydrofolate-Homocysteine S-Methyltransferase ,Enzymes ,Gene Expression Regulation, Neoplastic ,Mice ,Methionine ,Liver ,Cell Line, Tumor ,Creatinine ,Neoplasms ,Animals ,Female ,Guanidinoacetate N-Methyltransferase ,Carcinoma, Ehrlich Tumor ,Muscle, Skeletal ,Sarcoma 180 - Abstract
The creatine/creatine kinase system decreases drastically in sarcoma. In the present study, an investigation of catalytic activities, western blot and mRNA expression unambiguously demonstrates the prominent expression of the creatine-synthesizing enzymes l-arginine:glycine amidinotransferase and N-guanidinoacetate methyltransferase in sarcoma, Ehrlich ascites carcinoma and Sarcoma 180 cells, whereas both enzymes were virtually undetectable in normal muscle. Compared to that of normal animals, these enzymes remained unaffected in the kidney or liver of sarcoma-bearing mice. High activity and expression of mitochondrial arginase II in sarcoma indicated increased ornithine formation. Slightly or moderately higher levels of ornithine, guanidinoacetate and creatinine were observed in sarcoma compared to muscle. Despite the intrinsically low level of creatine in Ehrlich ascites carcinoma and Sarcoma 180 cells, these cells could significantly take up and release creatine, suggesting a functional creatine transport, as verified by measuring mRNA levels of creatine transporter. Transcript levels of arginase II, ornithine-decarboxylase, S-adenosyl-homocysteine hydrolase and methionine-synthase were significantly upregulated in sarcoma and in Ehrlich ascites carcinoma and Sarcoma 180 cells. Overall, the enzymes related to creatine and arginine/methionine metabolism were found to be significantly upregulated in malignant cells. However, the low levels of creatine kinase in the same malignant cells do not appear to be sufficient for the building up of an effective creatine/phosphocreatine pool. Instead of supporting creatine biosynthesis, l-arginine:glycine amidinotransferase and N-guanidinoacetate methyltransferase appear to be geared to support cancer cell metabolism in the direction of polyamine and methionine synthesis because both these compounds are in high demand in proliferating cancer cells.
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- 2008
50. In vivo assessment of toxicity and pharmacokinetics of methylglyoxal. Augmentation of the curative effect of methylglyoxal on cancer-bearing mice by ascorbic acid and creatine
- Author
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Manju, Ghosh, Dipa, Talukdar, Swapna, Ghosh, Nivedita, Bhattacharyya, Manju, Ray, and Subhankar, Ray
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Male ,Reproduction ,Body Weight ,Longevity ,Antineoplastic Agents ,Drug Synergism ,Ascorbic Acid ,Vitamins ,Creatine ,Pyruvaldehyde ,Survival Analysis ,Enzymes ,Rats ,Mice ,Dogs ,Fertility ,Teratogens ,Species Specificity ,Animals ,Female ,Rabbits ,Carcinoma, Ehrlich Tumor ,Neoplasm Transplantation - Abstract
Previous in vivo studies from several laboratories had shown remarkable curative effect of methylglyoxal on cancer-bearing animals. In contrast, most of the recent in vitro studies have assigned a toxic role for methylglyoxal. The present study was initiated with the objective to resolve whether methylglyoxal is truly toxic in vivo and to reassess its therapeutic potential. Four species of animals, both rodent and non-rodent, were treated with different doses of methylglyoxal through oral, subcutaneous and intravenous routes. Acute (treatment for only 1 day) toxicity tests had been done with mouse and rat. These animals received 2, 1 and 0.3 g of methylglyoxal/kg of body weight in a day through oral, subcutaneous and intravenous routes respectively. Chronic (treatment for around a month) toxicity test had been done with mouse, rat, rabbit and dog. Mouse, rat and dog received 1, 0.3 and 0.1 g of methylglyoxal/kg of body weight in a day through oral, subcutaneous and intravenous routes respectively. Rabbit received 0.55, 0.3 and 0.1 g of methylglyoxal/kg of body weight in a day through oral, subcutaneous and intravenous routes respectively. It had been observed that methylglyoxal had no deleterious effect on the physical and behavioral pattern of the treated animals. Fertility and teratogenecity studies were done with rats that were subjected to chronic toxicity tests. It had been observed that these animals produced healthy litters indicating no damage of the reproductive systems as well as no deleterious effect on the offspring. Studies on several biochemical and hematological parameters of methylglyoxal-treated rats and dogs and histological studies of several organs of methylglyoxal-treated mouse were performed. These studies indicated that methylglyoxal had no apparent deleterious effect on some vital organs of these animals. A detailed pharmacokinetic study was done with mouse after oral administration of methylglyoxal. The effect of methylglyoxal alone and in combination with creatine and ascorbic acid on cancer-bearing animals had been investigated by measuring the increase in life span and tumor cell growth inhibition. The results indicated that anticancer effect of methylglyoxal was significantly augmented by ascorbic acid and further augmented by ascorbic acid and creatine. Nearly 80% of the animals treated with methylglyoxal plus ascorbic acid plus creatine were completely cured and devoid of any malignant cells within the peritoneal cavity.
- Published
- 2005
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