13 results on '"Suha Sureyya Ozbek"'
Search Results
2. Developing Pretrained Language Models for Turkish Biomedical Domain.
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Hazal Türkmen, Oguz Dikenelli, Cenk Eraslan, Mehmet Cem çalli, and Suha Sureyya Ozbek
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- 2022
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3. Reflections from Ege University Medical School’s clinical internship mentoring program (2011–2018)
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Hatice Sahin, Munevver Erdinc, Selda Erensoy, Abdullah Sayiner, Mahmut Coker, Suha Sureyya Ozbek, Ferhan Girgin Sagın, Tayfun Kirazli, Sohret Aydemir, Ozen Kacmaz Basoglu, and Nilgun Kultursay
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ComputingMilieux_THECOMPUTINGPROFESSION ,Biochemistry (medical) ,Clinical Biochemistry ,ComputingMilieux_COMPUTERSANDEDUCATION ,Molecular Biology ,Biochemistry - Abstract
Objectives Ege University Medical School initiated system based integrated clinical internship in 2011. The need for a mentor who would closely monitor and guide the student in knowledge and skill gains for every clinical internship block and who would be an academic role model was well established. The aim of this study reports the results of the clinical internship mentoring program in the Ege University Medical School. Methods The Clinical Internship Counseling Committee reviewed similar programs in the literature, conducted focus group discussions, determined the wishes and needs of the students, and developed a mentoring program. Results The program was initiated by announcing the student-mentor matches and the procedure which was based on meetings of the student-mentor at the 1st, 8th and 13th weeks of the integrated internship. This meeting was designed to be a time for the mentor to guide the student to achieve the internship goals, to establish his/her internship progress file and to be an academic role model. At the final evaluation of the mentor, communication between student and the progress in the establishment of the internship progress file contributed to the 5% of the final internship success grade. Conclusions Evaluation of 7 years of experience led to the agreement that the goals of clinical internship program should be integrated into the newly established “Student Mentorship Program” that starts at the 1st year of the medical school.
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- 2021
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4. High chitotriosidase and AGE levels in acromegaly: a case-control study
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Hatice Ozisik, Banu Sarer Yurekli, Aslı Suner, Oznur Copur, Eser Yıldırım Sozmen, Suha Sureyya Ozbek, Ahmet Kasım Karabulut, Ilgın Yıldırım Simsir, Mehmet Erdogan, Sevki Cetinkalp, and Fusun Saygili
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Risk ,YKL-40 ,Consensus ,Endocrinology, Diabetes and Metabolism ,Protein ,Glycation End-Products ,General Medicine ,Atherosclerosis ,Low-Density-Lipoprotein ,High-sensitivity CRP ,Oxidative Stress ,Malondialdehyde ,Acromegaly ,Growth-Hormone ,Advanced glycation end products ,Thickness ,Chitotriosidase - Abstract
Purpose Acromegaly is associated with oxidative stress and inflammation parameters. Chitotriosidase (CHITO) is a marker of macrophage activation and plays a pivotal role in the activation of inflammatory and immunological responses. Our study aimed to determine CHITO,YKL-40, advanced glycation end product (AGE), and high-sensitivity C-reactive protein (hsCRP) levels to investigate malondialdehyde (MDA), catalase, superoxide dismutase (SOD), and glutathione peroxidase (GSH-Px) activities and to evaluate any association of these parameters with carotid intima media thickness (cIMT) in patients with controlled acromegaly. Methods Thirty controlled acromegaly patients and 41 age- and sex-matched control cases were studied. We obtained demographic data, hormonal and metabolic parameters, and cIMT. CHITO activity was measured with the fluorometric method of Chamoles et al. YKL-40 and hsCRP levels were measured using ELISA. AGEs were measured based on spectrofluorimetric detection. GSH-Px activity was determined by a colorimetric assay. MDA, SOD, and catalase activities were determined in hemolysis. Results Higher CHITO, AGE, and hsCRP concentrations were observed in patients with acromegaly compared to controls. SOD levels were non-significantly higher in the acromegaly group, while catalase activities were lower in patients with acromegaly. Correlation analyses of CHITO, AGEs, YKL-40, hsCRP, MDA, catalase, GSH-Px, and SOD with metabolic, anthropometric, and laboratory parameters did not demonstrate any significant correlation (p > 0.05). There was no significant difference between groups with regard to cIMT levels. Conclusion This is the first study investigating CHITO and AGE levels in patients with acromegaly. Serum CHITO, AGE, and hsCRP levels in acromegalic patients were significantly increased. It may be important to evaluate CHITO, AGE, and hsCRP levels in acromegalic patients who are already under cardiometabolic surveillance due to risk of developing cardiovascular disease., Ege University Scientific Research Projects Coordination Unit [TGA-2021-23122], This project was supported by the Ege University Scientific Research Projects Coordination Unit through Project Number: TGA-2021-23122.
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- 2022
5. Prediction of malignancy upgrade rate in high-risk breast lesions by artificial intelligence model
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Suha Sureyya Ozbek, Osman Zekioglu, Levent Yeniay, oguz dikenelli, Riza Cenk Erdur, Basak Katuk, Aysenur Oktay, and Ozge Aslan
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- 2021
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6. Comparison of ultrasound findings of papillary thyroid carcinoma subtypes based on the 2022 WHO classification of thyroid neoplasms
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İlhan Hekimsoy, Yeşim Ertan, Gürdeniz Serin, Ahmet Kasım Karabulut, and Süha Süreyya Özbek
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WHO classification of thyroid neoplasms ,thyroid cancer ,papillary ,subtype ,ultrasonography ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
PurposeThe present study aimed to analyze and compare sonographic features of papillary thyroid carcinoma (PTC) subtypes to determine whether ultrasound (US) may aid in differentiating particular subtypes.MethodsThis retrospective study enrolled 133 patients diagnosed with 142 histopathologically proven PTCs as per the fifth edition of the World Health Organization classification of thyroid neoplasms between January 2013 and May 2023. US features based on the American College of Radiology and European Thyroid Imaging and Reporting Data Systems (TIRADS), and histopathological characteristics of nodules were assessed and compared.ResultsHistopathological analysis yielded 55 (38.7%) classic PTC, 32 (22.5%) invasive encapsulated follicular variant (IEFV) PTC, 20 (14.1%) oncocytic subtype, 14 (9.9%) non-invasive follicular thyroid neoplasm with papillary-like nuclear features (NIFTP), 11 (7.8%) infiltrative follicular subtype, 7 (4.9%) tall cell subtype, 2 (1.4%) solid subtype, and 1 (0.7%) diffuse sclerosing subtype. The US findings indicating malignancy, such as taller-than-wide shape, irregular margins, echogenic foci, and higher TIRADS categories, were more frequently demonstrated in nodules with classic PTC and the tall cell subtype, in line with their histopathological features. Conversely, IEFV-PTC and NIFTP rarely exhibited these high-risk sonographic features. US appearance of the oncocytic subtype more frequently overlapped with IEFV-PTC, yet hypo/very hypoechoic nodules with larger nodular diameters and higher TIRADS scores may favor the diagnosis of this subtype.ConclusionUS features of certain subtypes may guide the differential diagnosis regarding shape, margin, echogenic foci, and TIRADS category of nodules; however, definitive subtyping is not yet possible using US images alone.
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- 2024
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7. Prediction of malignancy upgrade rate in high-risk breast lesions using an artificial intelligence model: a retrospective study
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Özge Aslan, Ayşenur Oktay, Başak Katuk, Riza Cenk Erdur, Oğuz Dikenelli, Levent Yeniay, Osman Zekioğlu, and Süha Süreyya Özbek
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artificial intelligence ,breast ,cancer ,high risk lesion of breast ,image-guided biopsy ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
PURPOSEHigh-risk breast lesions (HRLs) are associated with future risk of breast cancer. Considering the pathological subtypes, malignancy upgrade rate differs according to each subtype and depends on various factors such as clinical and radiological features and biopsy method. Using artificial intelligence and machine learning models in breast imaging, evaluations can be made in terms of risk estimation in different research areas. This study aimed to develop a machine learning model to distinguish HRL cases requiring surgical excision from lesions with a low risk of accompanying malignancy.METHODSA total of 94 patients who were diagnosed with HRL by image-guided biopsy between January 2008 and March 2020 were included in the study. A structured database was created with clinical and radiological characteristics and histopathological results. A machine learning prediction model was created to make binary classifications of lesions as malignant or benign. Random forest, decision tree, K-nearest neighbors, logistic regression, support vector machine (SVM), and multilayer perceptron machine learning algorithms were used. Among these algorithms, SVM was the most successful. The estimations of malignancy for each case detected by artificial intelligence were combined and statistical analyses were performed.RESULTSConsidering all cases, the malignancy upgrade rate was 24.5%. A significant association was observed between malignancy upgrade rate and lesion size (P = 0.004), presence of mammography findings (P = 0.022), and breast imaging-reporting and data system category (P = 0.001). A statistically significant association was also found between the artificial intelligence prediction model and malignancy upgrade rate (P < 0.001). With the SVM model, an 84% accuracy and 0.786 area-underthe- curve score were obtained in classifying the data as benign or malignant.CONCLUSIONOur artificial intelligence model (SVM) can predict HRLs that can be followed up with a lower risk of accompanying malignancy. Unnecessary surgeries can be reduced, or second line vacuum excisions can be performed in HRLs, which are mostly benign, by evaluating on a case-by-case basis, in line with radiology–pathology compatibility and by using an artificial intelligence model.
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- 2023
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8. Diagnostic performance rates of the ACR-TIRADS and EU-TIRADS based on histopathological evidence
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İlhan Hekimsoy, Egemen Öztürk, Yeşim Ertan, Mehmet Nurullah Orman, Gülgün Kavukçu, Ahmet Gökhan Özgen, Murat Özdemir, and Süha Süreyya Özbek
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Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
PURPOSEIn this study, we aimed to assess the effectiveness of malignancy stratification algorithms of the American College of Radiology (ACR) and European Thyroid Association (ETA) in the delineation of thyroid nodules using a database of nodules that were unequivocally diagnosed by means of histopathological examination and meticulously matched with the imaged nodules.METHODSA total of 165 patients having 251 thyroid nodules with histopathologically proven definitive diagnoses during a 5-year period were included in this study. All patients had preoperatively undergone ultrasonography (US) examination, and US characteristics of the thyroid nodules were retrospectively analyzed and assigned in compliance with the thyroid imaging reporting and data system categories recommended by the ACR (ACR-TIRADS) and ETA (EU-TIRADS). The diagnostic effectiveness in the delineation of thyroid nodules and unnecessary fine-needle aspiration (FNAB) rates were evaluated.RESULTSOverall, 189 nodules (75.30%) were diagnosed as benign, while 62 nodules (24.70%) were reported to be malignant based on histopathological assessment. Sensitivity and specificity rates were 71% and 75% for ACR-TIRADS and 73% and 80% for EU-TIRADS. The area under the curve values were 0.78 and 0.80 for ACR-TIRADS and EU-TIRADS, respectively. The unnecessary FNAB rates were 61% for ACR-TIRADS and 64% for EU-TIRADS as per the recommended criteria of each algorithm.CONCLUSIONThe diagnostic performance of both malignancy stratification systems was signified to be moderate and sufficient in a cohort of nodules with definite histopathological diagnosis. In light of our results, we demonstrated the strengths and weaknesses of the ACR- and EU-TIRADS for physicians who should be familiar with them for optimal management of thyroid nodules.
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- 2021
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9. Impact of the HEAD-US Scoring System for Observing the Protective Effect of Prophylaxis in Hemophilia Patients: A Prospective, Multicenter, Observational Study
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Kaan Kavaklı, Süha Süreyya Özbek, Ali Bülent Antmen, Fahri Şahin, Şevkiye Selin Aytaç, Alphan Küpesiz, Bülent Zülfikar, Mehmet Sönmez, Ümran Çalışkan, Can Balkan, Tuğana Akbaş, Taner Arpacı, İpek Tamsel, Turgut Seber, Berna Oğuz, Can Çevikol, Mesut Bulakçı, Polat Koşucu, Demet Aydoğdu, İlgen Şaşmaz, Gülen Tüysüz, Başak Koç, Hüseyin Tokgöz, Zuhal Demirci, and Burcu Özkan
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hemophilic arthropathy ,joint scores ,hjhs ,ultrasonography ,Diseases of the blood and blood-forming organs ,RC633-647.5 - Abstract
Objective: This study aimed to observe the preventive effect of prophylactic treatment on joint health in people with hemophilia (PwH) and to investigate the importance of integration of ultrasonographic examination into clinical and radiological evaluation of the joints. Materials and Methods: This national, multicenter, prospective, observational study included male patients aged ≥6 years with the diagnosis of moderate or severe hemophilia A or B from 8 centers across Turkey between January 2017 and March 2019. Patients were followed for 1 year with 5 visits (baseline and 3rd, 6th, 9th, and 12th month visits). The Hemophilia Joint Health Score (HJHS) was used for physical examination of joints, the Pettersson scoring system was used for radiological assessment, point-of-care (POC) ultrasonography was used for bilateral examinations of joints, and the Hemophilia Early Arthropathy Detection with Ultrasound (HEAD-US) score was used for evaluation of ultrasonography results. Results: Seventy-three PwH, of whom 62 had hemophilia A and 11 had hemophilia B, were included and 24.7% had target joints at baseline. The HJHS and HEAD-US scores were significantly increased at the 12th month in all patients. These scores were also higher in the hemophilia A subgroup than the hemophilia B subgroup. However, in the childhood group, the increment of scores was not significant. The HEAD-US total score was significantly correlated with both the HJHS total score and Pettersson total score at baseline and at the 12th month. Conclusion: The HEAD-US and HJHS scoring systems are valuable tools during follow-up examinations of PwH and they complement each other. We suggest that POC ultrasonographic evaluation and the HEAD-US scoring system may be integrated into differential diagnosis of bleeding and long-term monitoring for joint health as a routine procedure.
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- 2021
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10. What does peritoneal thickness in peritoneal dialysis patients tell us?
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Soner, Duman, Suha Sureyya, Ozbek, Ebru Sevinc, Gunay, Devrim, Bozkurt, Gulay, Asci, Savas, Sipahi, Fatih, Kirçelli, Muhittin, Ertilav, Mehmet, Ozkahya, and Ercan, Ok
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Adult ,Male ,Time Factors ,Body Weight ,Humans ,Female ,Middle Aged ,Peritoneum ,Peritoneal Dialysis ,Body Height ,Aged ,Ultrasonography - Abstract
Loss of peritoneal function is a major factor leading to failure of treatment in peritoneal dialysis (PD). Although the precise biologic mechanisms responsible for these changes have not been defined, the general assumption is that alterations in peritoneal function are related to structural changes in the peritoneal membrane. The aim of the present study was to uncover the relationship between functional parameters of peritoneum and peritoneal thickness as measured by ultrasonography. We studied 43 prevalent patients who had been on PD for at least 12 months in the Ege University PD unit. We recorded body weight, height, age, sex, PD duration, episodes of peritonitis, and results of peritoneal equilibration tests. Parietal peritoneal thickness was measured from four abdominal quadrants at the mid-clavicular line. The peritoneal thickness measurement was determined as the mean of the four separate measurements. (In some cases, the measurement at one of the lower quadrants was excluded from the calculation if the peritoneal catheter was present near the area probed.) Mean peritoneal thickness in the patients was 446 +/- 164 microm (range: 250-930 microm), which was significantly correlated with mean body weight (r = 0.31, p0.05), height (r = 0.31, p0.05), end-to-initial ratio of dialysate glucose (r = -0.44, p0. 01), dialysate-to-plasma creatinine (r = 0.51, p0.01), and PD duration (r = 0.48, p0.01). Peritoneal thickness was positively correlated with time on dialysis, being a median of 370 microm [interquartile range (IQR): 283-400 microm] in patients who had been on PD for less than 24 months up and 660 microm (IQR: 483-733 microm) in patients who had undergone PD for more than 6 years. Ultrasound examination is a simple and noninvasive method of measuring peritoneal thickness in PD patients. It may be useful in the study of peritoneal structure and function. Sequential measurements over time may be useful for early diagnosis of encapsulating peritoneal sclerosis.
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- 2007
11. Hepatic and splenic sonographic and sonoelastographic findings in pulmonary arterial hypertension
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İlhan Hekimsoy, Burçin Kibar Öztürk, Hatice Soner Kemal, Meral Kayıkçıoğlu, Ömer Faruk Dadaş, Gülgün Kavukçu, Mehmet Nurullah Orman, Sanem Nalbantgil, Sadık Tamsel, Hakan Kültürsay, and Süha Süreyya Özbek
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congestion ,pulmonary arterial hypertension ,shear wave elastography ,elasticity imaging techniques ,stiffness ,Medical technology ,R855-855.5 - Abstract
Purpose The aim of this study was to evaluate the associations of sonographic and sonoelastographic parameters with clinical cardiac parameters, as well as to assess their value in predicting survival in patients with pulmonary arterial hypertension (PAH). Methods Thirty-six patients with PAH and normal liver function were prospectively enrolled in this prospective study along with 26 healthy controls, all of whom underwent ultrasound and point shear wave elastography examinations. Additionally, the portal vein pulsatility index (PVPI), inferior vena cava collapsibility index, and clinical cardiac variables were obtained in PAH patients. The values of hepatic (LVs) and splenic shear wave velocity (SVs) were compared between PAH patients and controls. The relationships between all sonographic and clinical parameters in the PAH patients were analyzed. Furthermore, their prognostic value in predicting survival was investigated. Results LVs values in PAH patients (median, 1.62 m/s) were significantly higher than in controls (median, 0.99 m/s), while no significant difference was observed in SVs values. Patients with higher grades of tricuspid regurgitation (TR) had significantly different values of PVPI (P=0.010) and sonoelastographic parameters (P
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- 2021
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12. COVID-19 radiology CT personnel management
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Halil İbrahim Özdemir, Recep Savaş, and Süha Süreyya Özbek
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Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
A new coronavirus outbreak called COVID-19 started in December 2019. In Turkey, the first case was reported on 10 March 2020. In this article, information will be given about the patient and staff management and organization that we have implemented in the Radiology Department of our hospital during the COVID-19 pandemic. The rules we followed were: 1- Performing the examinations of COVID-19 patients and suspects with a CT device isolated from other patients; 2- Reducing the unnecessary workload in imaging modalities other than CT, emergency radiography, and emergency ultrasonography; 3- Directing and managing patients and their relatives in accordance with the mask and distancing rules; 4- Disinfecting the device with an appropriate disinfectant after each patient in order to prevent cross-contamination; 5- Protecting the entire technician team from infection by employing one week work, two weeks off shifts of fixed teams; 6- Ensuring adequate ventilation of the gantry room. Adhering to the above rules, no infection spread was reported from the Radiology department and especially the COVID-19 CT unit.
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- 2021
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13. US findings in euthyroid patients with positive antithyroid autoantibody tests compared to normal and hypothyroid cases
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Türker Acar,, Süha Süreyya Özbek,, Mehmet Erdoğan,, Ahmet Gökhan Özgen,, and Selçuk Orhan Demirel
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Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
PURPOSEWe aimed to compare the ultrasonographic and laboratory parameters of euthyroid patients who have only positive antithyroid autoantibody test results with those of patients with a hypothyroid status of Hashimoto’s thyroiditis (HT).MATERIALS AND METHODSThirty-five patients with newly diagnosed HT, 35 euthyroid patients who have autoantibodies against thyroid peroxidase (TPOAb) and/or thyroglobulin (TgAb), and 40 controls were enrolled in the study. Plasma free T3, free T4, thyroid stimulating hormone, TPOAb, and TgAb levels were obtained retrospectively. For gray-scale ultrasonography, each thyroid gland of all individuals graded with gray-scale grading (GSG), which was determined according to the gland size, parenchymal structure, echogenicity, micronodulation, contour irregularity, and existence of hyperechoic septa. For Doppler analysis, the peak systolic velocity (S), resistive index (RI), and pulsatility index (PI) values were obtained from the superior thyroid artery (STA) and intrathyroidal artery (ITA). The color pixel ratio (CPR), which was computationally evaluated from a power Doppler image of all individuals, was used for quantification of the intrathyroidal vascularity.RESULTSAlthough the mean GSG values were higher in the HT and antibody-positive groups than they were in the control group, there was no significant difference between the HT and antibody-positive groups. The three study groups demonstrated no statistically significant difference with regard to the S, RI, or PI variables obtained from the STAs and ITAs. Although the CPR values were highest in the HT group, the difference between the HT and antibody-positive group did not reach statistical significance.CONCLUSIONThe euthyroid antibody-positive group revealed gray-scale and Doppler ultrasonographic findings that were similar to those of the HT group.
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- 2013
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