450 results on '"TUBB3"'
Search Results
2. Identification of TUBB3 as an immunotherapy target in lung cancer by genome wide in vivo CRISPR screening
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Zhao, Dan, Deshpande, Ravindra, Wu, Kerui, Tyagi, Abhishek, Sharma, Sambad, Wu, Shih-Ying, Xing, Fei, O'Neill, Stacey, Ruiz, Jimmy, Lyu, Feng, and Watabe, Kounosuke
- Published
- 2025
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3. TUBB3 Expression in Nonsmall Cell Lung Cancer Tissue: Reasons for Immunohistochemical Assay Discordance and an Approach to Overcome It.
- Author
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Bogush, T. A., Lee, A., Kalyuzhny, S. A., Bogush, E. A., Melnikov, M. Ya., and Kosorukov, V. S.
- Abstract
The reasons for discordance data on the contribution of a TUBB3 microtubule protein to resistance to antitumor drugs and the metastatic potential of tumors with an assessment of prognostic significance of TUBB3 expression in nonsmall cell lung cancer tissue are analyzed. The need to introduce quantitative analysis methods in molecular diagnostics of tumors (in particular, immunofluorescence assessment associated with flow cytometry) is substantiated. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
4. Clinical and genetic characteristics of Chinese patients with congenital fibrosis of the extraocular muscles
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Jin Wu, Lijuan Huang, Yunyu Zhou, Yan Xie, Tong Mo, and Ningdong Li
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Congenital fibrosis of the extraocular muscles ,KIF21A ,TUBB3 ,Mutation ,Medicine - Abstract
Abstract Objective This study aimed to describe the clinical and genetic characteristics of Chinese patients with congenital fibrosis of the extraocular muscles (CFEOM), and to evaluate the phenotype–genotype correlations in these patients. Methods This was a retrospective study. Patients with CFEOM underwent detailed ophthalmic examinations and magnetic resonance imaging (MRI). Panel-based next-generation sequencing was performed to identify pathogenic variants of disease-causing genes. Results Sixty-two patients with CFEOM were recruited into this study. Thirty-nine patients were diagnosed with CFEOM1 and 23 with CFEOM3. Forty-nine of the 62 patients with CFEOM carried either KIF21A (41/49) or TUBB3 variants (8/49). Six known missense variants in the KIF21A and TUBB3 genes, and a novel variant (c.3906T > A, p.D1302E) in the KIF21A gene were detected. Most patients with CFEOM1 carrying the KIF21A mutation displayed isolated CFEOM, whereas patients with CFEOM3 carrying the TUBB3 mutation had a wide range of clinical manifestations, either CFEOM alone or syndromes. Nystagmus was also present in 12 patients with CFEOM. Furthermore, the MRI findings varied, ranging from attenuation of the extraocular muscles to dysgenesis of the cranial nerves and brain structure. Conclusions The novel variants identified in this study will further expand the spectrum of pathogenic variants in CFEOM-related genes. However, no phenotype–genotype correlations were established because of the diversity of the clinical characteristics of these patients.
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- 2024
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5. Clinical and genetic characteristics of Chinese patients with congenital fibrosis of the extraocular muscles.
- Author
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Wu, Jin, Huang, Lijuan, Zhou, Yunyu, Xie, Yan, Mo, Tong, and Li, Ningdong
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MAGNETIC resonance imaging ,CHINESE people ,MISSENSE mutation ,CRANIAL nerves ,BRAIN anatomy - Abstract
Objective: This study aimed to describe the clinical and genetic characteristics of Chinese patients with congenital fibrosis of the extraocular muscles (CFEOM), and to evaluate the phenotype–genotype correlations in these patients. Methods: This was a retrospective study. Patients with CFEOM underwent detailed ophthalmic examinations and magnetic resonance imaging (MRI). Panel-based next-generation sequencing was performed to identify pathogenic variants of disease-causing genes. Results: Sixty-two patients with CFEOM were recruited into this study. Thirty-nine patients were diagnosed with CFEOM1 and 23 with CFEOM3. Forty-nine of the 62 patients with CFEOM carried either KIF21A (41/49) or TUBB3 variants (8/49). Six known missense variants in the KIF21A and TUBB3 genes, and a novel variant (c.3906T > A, p.D1302E) in the KIF21A gene were detected. Most patients with CFEOM1 carrying the KIF21A mutation displayed isolated CFEOM, whereas patients with CFEOM3 carrying the TUBB3 mutation had a wide range of clinical manifestations, either CFEOM alone or syndromes. Nystagmus was also present in 12 patients with CFEOM. Furthermore, the MRI findings varied, ranging from attenuation of the extraocular muscles to dysgenesis of the cranial nerves and brain structure. Conclusions: The novel variants identified in this study will further expand the spectrum of pathogenic variants in CFEOM-related genes. However, no phenotype–genotype correlations were established because of the diversity of the clinical characteristics of these patients. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
6. NOTCH3 promotes docetaxel resistance of prostate cancer cells through regulating TUBB3 and MAPK signaling pathway.
- Author
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Sun, Xianchao, Zhang, Ying, Xin, Shiyong, Jin, Liang, Cao, Qiong, Wang, Hong, Wang, Keyi, Liu, Xiang, Tang, Chaozhi, Li, Weiyi, Li, Ziyao, Wen, Xiaofei, Yang, Guosheng, Guo, Changcheng, Liu, Zhiyu, and Ye, Lin
- Abstract
Docetaxel is the preferred chemotherapeutic agent in patients with castrate‐resistant prostate cancer (CRPC). However, patients eventually develop docetaxel resistance and in the absence of effective treatment options. Consequently, it is essential to investigate the mechanisms generating docetaxel resistance and develop novel alternative therapeutic targets. RNA sequencing was undertaken on docetaxel‐sensitive and docetaxel‐resistant prostate cancer (PCa) cells. Subsequently, chemoresistance, cancer stemness, and lipid metabolism were investigated. To obtain insight into the precise activities and action mechanisms of NOTCH3 in docetaxel‐resistant PCa, immunoprecipitation, mass spectrometry, ChIP, luciferase reporter assay, cell metabolism, and animal experiments were performed. Through RNA sequencing analysis, we found that NOTCH3 expression was markedly higher in docetaxel‐resistant cells relative to parental cells, and that this trend was continued in docetaxel‐resistant PCa tissues. Experiments in vitro and in vivo revealed that NOTCH3 enhanced stemness, lipid metabolism, and docetaxel resistance in PCa. Mechanistically, NOTCH3 is bound to TUBB3 and activates the MAPK signaling pathway. Moreover, NOTCH3 was directly regulated by MEF2A in docetaxel‐resistant cells. Notably, targeting NOTCH3 and the MEF2A/TUBB3 signaling axis was related to docetaxel chemoresistance in PCa. Overall, these results demonstrated that NOTCH3 fostered stemness, lipid metabolism, and docetaxel resistance in PCa via the TUBB3 and MAPK signaling pathways. Therefore, NOTCH3 may be employed as a prognostic biomarker in PCa patients. NOTCH3 could be a therapeutic target for PCa patients, particularly those who have developed docetaxel resistance. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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7. The role of microtubule-associated protein tau in netrin-1 attractive signaling.
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Huai Huang, Majumder, Tanushree, Khot, Bhakti, Suriyaarachchi, Harindi, Tao Yang, Qiangqiang Shao, Tirukovalluru, Shraddha, and Guofa Liu
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MICROTUBULE-associated proteins , *TUBULINS , *TAU proteins , *AXONS , *EPHRIN receptors , *MICROTUBULES - Abstract
Direct binding of netrin receptorswith dynamic microtubules (MTs) in the neuronal growth cone plays an important role in netrin-mediated axon guidance. However, how netrin-1 (NTN1) regulates MT dynamics in axon turning remains amajor unanswered question. Here, we show that the coupling of netrin-1 receptor DCC with tau (MAPT)-regulated MTs is involved in netrin-1-promoted axon attraction. Tau directly interacts with DCC and partially overlaps with DCC in the growth cone of primary neurons. Netrin-1 induces this interaction and the colocalization of DCC and tau in the growth cone. The netrin-1-induced interaction of tau with DCC relies on MT dynamics and TUBB3, a highly dynamic ß-tubulin isotype in developing neurons. Netrin-1 increased cosedimentation of DCC with tau and TUBB3 in MTs, and knockdown of either tau or TUBB3 mutually blocked this effect. Downregulation of endogenous tau levels by tau shRNAs inhibited netrin-1-induced axon outgrowth, branching and commissural axon attraction in vitro, and led to defects in spinal commissural axon projection in vivo. These findings suggest that tau is a keyMT-associated protein coupling DCC with MT dynamics in netrin-1-promoted axon attraction. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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8. Congenital Fibrosis of the Extraocular Muscles (CFEOM): A Baby with Poor Tracking and Exotropia
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Whitman, Mary C., Engle, Elizabeth C., Heidary, Gena, editor, and Phillips, Paul H., editor
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- 2023
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9. Editorial: Tubulinopathies: fundamental and clinical challenges.
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Sferra, Antonella, Bertini, Enrico, and Haase, Georg
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AXONAL transport ,FAMILIAL spastic paraplegia - Published
- 2023
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10. Otoprotective Effects of Quercetin Against Oxidative Damage in the Rat's Cochlea Induced by Noise and Silver Nanoparticles.
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Goodarzi, Zahra, Khavanin, Ali, Karami, Esmaeil, Rashidy-Pour, Ali, Belji Kangarlou, Marzieh, Kiani, Mehrafarin, and Razmjouei, Jaleh
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SILVER nanoparticles , *COCHLEA , *NOISE-induced deafness , *QUERCETIN , *NOISE , *INNER ear , *COCHLEA physiology - Abstract
[Display omitted] • SNPs, noise, independently and combined, decreased hearing performance. • TUBB3, MYH-7 expression decrease in rat cochlea after exposure to SNPs and noise. • The treatments changed IL-6, TNF-α, NOX3 expression in rat cochlea. • Quercetin improves hearing, reduces oxidative stress in noise-exposed and SNPs. • Que improves independent exposures more than combined exposures the treatments. The aim of this study was to investigate the otoprotective effects of Quercetin (Que) against both noise-induced hearing loss (NIHL) and the ototoxicity of silver nanoparticles (SNPs) in rats. Forty-two male Wistar rats were divided into seven groups (n = 6): control, SNPs, Que (100 mg/kg) plus SNPs (100 mg/kg), noise (104 dB), Que plus noise, noise plus SNPs, and noise plus Que plus SNPs. In the weight change results, there was no significant difference between the groups exposed to noise plus SNPs and SNPs compared to the control group. However, animals had significant changes in DPOAE amplitude at 1 and 3 days post-exposure when compared to baseline. Additionally, the DPOAE value of rats administered with Que plus SNPs was higher than in all other groups. Que also decreased the levels of TACT, MDA, IL-6, TNF-α, and NOX3 in the groups exposed to noise and SNPs and increased the SOD level and expression of myosin heavy chain VII (MYH7) and β-tubulin III (TUBB3) proteins. Furthermore, Que decreased structural changes in the animals' cochlea. Our findings indicate that pretreatment with Que efficiently counteracted the adverse effects of noise and SNPs on inner hair cell, outer hair cell, and nerve cells, which are responsible for high-frequency perception. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
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11. Clinicopathological significance of TUBB3 in upper tract urothelial carcinoma and possible application in urine cytology.
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Kobayashi, Go, Hayashi, Tetsutaro, Sentani, Kazuhiro, Uraoka, Naohiro, Fukui, Takafumi, Kido, Aya, Katsuya, Narutaka, Ishikawa, Akira, Babasaki, Takashi, Sekino, Yohei, Nose, Hiroyuki, Hinata, Nobuyuki, and Oue, Naohide
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TRANSITIONAL cell carcinoma , *CYTOLOGY , *RENAL cell carcinoma , *CLINICAL pathology , *BLADDER cancer , *TUBULINS - Abstract
βIII‐Tubulin, encoded by the TUBB3 gene, is a microtubule protein. We previously reported that TUBB3 is overexpressed in renal cell carcinoma. We investigated the clinicopathological significance of TUBB3 in upper tract urothelial carcinoma (UTUC) by immunohistochemistry. In normal tissue, TUBB3 expression was weak or absent. In contrast, TUBB3 overexpression was observed in urothelial carcinoma (UC) tissues in 51 (49%) of 103 UTUC cases. TUBB3 overexpression was associated with nodular/flat morphology, high‐grade disease, high T stage, and a poor prognosis. Similar results were obtained in The Cancer Genome Atlas bladder cancer cohort. TUBB3 expression was also associated with high Ki‐67 labeling index, CD44v9, HER2, EGFR, and p53 expression in UTUC. Among representative cancer‐related molecules, TUBB3 was an independent predictor of progression‐free survival and high‐grade UC. Finally, using urine cytology samples, we analyzed TUBB3 expression by immunocytochemistry. TUBB3 expression was more frequently found in UC cells than in nonneoplastic cells. The diagnostic accuracy of urine cytology was improved when combined with TUBB3 immunostaining. The findings suggest the importance of TUBB3 in tumor progression and its potential application as a biomarker for high‐grade disease and the prognosis of UC. Moreover, combination with TUBB3 immunostaining might improve the diagnostic accuracy of urine cytology. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
12. OSGIN1 is a novel TUBB3 regulator that promotes tumor progression and gefitinib resistance in non-small cell lung cancer.
- Author
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Xie, Xiaomeng, Laster, Kyle Vaughn, Li, Jian, Nie, Wenna, Yi, Yong Weon, Liu, Kangdong, Seong, Yeon-Sun, Dong, Zigang, and Kim, Dong Joon
- Abstract
Background: Oxidative stress induced growth inhibitor 1 (OSGIN1) regulates cell death. The role and underlying molecular mechanism of OSGIN1 in non-small cell lung cancer (NSCLC) are uncharacterized. Methods: OSGIN1 expression in NSCLC samples was detected using immunohistochemistry and Western blotting. Growth of NSCLC cells and gefitinib-resistant cells expressing OSGIN1 or TUBB3 knockdown was determined by MTT, soft agar, and foci formation assays. The effect of OSGIN1 knockdown on in vivo tumor growth was assessed using NSCLC patient-derived xenograft models and gefitinib-resistant patient-derived xenograft models. Potentially interacting protein partners of OSGIN1 were identified using IP-MS/MS, immunoprecipitation, PLA, and Western blotting assays. Microtubule dynamics were explored by tubulin polymerization assay and immunofluorescence. Differential expression of signaling molecules in OSGIN1 knockdown cells was investigated using phospho-proteomics, KEGG analysis, and Western blotting. Results: We found that OSGIN1 is highly expressed in NSCLC tissues and is positively correlated with low survival rates and tumor size in lung cancer patients. OSGIN1 knockdown inhibited NSCLC cell growth and patient-derived NSCLC tumor growth in vivo. Knockdown of OSGIN1 strongly increased tubulin polymerization and re-established gefitinib sensitivity in vitro and in vivo. Additionally, knockdown of TUBB3 strongly inhibited NSCLC cell proliferation. Mechanistically, we found that OSGIN1 enhances DYRK1A-mediated TUBB3 phosphorylation, which is critical for inducing tubulin depolymerization. The results of phospho-proteomics and ontology analysis indicated that knockdown of OSGIN1 led to reduced propagation of the MKK3/6-p38 signaling axis. Conclusions: We propose that OSGIN1 modulates microtubule dynamics by enhancing DYRK1A-mediated phosphorylation of TUBB3 at serine 172. Moreover, elevated OSGIN1 expression promotes NSCLC tumor growth and gefitinib resistance through the MKK3/6-p38 signaling pathway. Our findings unveil a new mechanism of OSGIN1 and provide a promising therapeutic target for NSCLC treatment in the clinic. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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13. TUBB3 and KIF21A in neurodevelopment and disease.
- Author
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Puri, Dharmendra, Barry, Brenda J., and Engle, Elizabeth C.
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MOLECULAR motor proteins ,MISSENSE mutation ,MUTANT proteins ,TUBULINS ,NEURAL development - Abstract
Neuronal migration and axon growth and guidance require precise control of microtubule dynamics and microtubule-based cargo transport. TUBB3 encodes the neuronal-specific β-tubulin isotype III, TUBB3, a component of neuronal microtubules expressed throughout the life of central and peripheral neurons. Human pathogenic TUBB3 missense variants result in altered TUBB3 function and cause errors either in the growth and guidance of cranial and, to a lesser extent, central axons, or in cortical neuronal migration and organization, and rarely in both. Moreover, human pathogenic missense variants in KIF21A, which encodes an anterograde kinesin motor protein that interacts directly with microtubules, alter KIF21A function and cause errors in cranial axon growth and guidance that can phenocopy TUBB3 variants. Here, we review reported TUBB3 and KIF21A variants, resulting phenotypes, and corresponding functional studies of both wildtype and mutant proteins. We summarize the evidence that, in vitro and in mouse models, loss-of-function and missense variants can alter microtubule dynamics and microtubule-kinesin interactions. Lastly, we highlight additional studies that might contribute to our understanding of the relationship between specific tubulin isotypes and specific kinesin motor proteins in health and disease. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
14. Editorial: Tubulinopathies: fundamental and clinical challenges
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Antonella Sferra, Enrico Bertini, and Georg Haase
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tubulinopathies ,tubulin (microtubules) ,neurodegeneration ,neurodevelopment ,TUBA1A ,TUBB3 ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2023
- Full Text
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15. Gene expression and locomotor recovery in adult rats with spinal cord injury and plasma-synthesized polypyrrole/iodine application combined with a mixed rehabilitation scheme.
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Coyoy-Salgado, Angélica, Orozco-Barrios, Carlos, Sánchez-Torres, Stephanie, Olayo, María Guadalupe, Cruz, Guillermo Jesus, Morales-Corona, Juan, Olayo, Roberto, Diaz-Ruiz, Araceli, Ríos, Camilo, Alvarez-Mejia, Laura, Mondragón-Lozano, Rodrigo, Morales-Guadarrama, Axayacatl, Alonso-García, Ana Lucía, Fabela-Sánchez, Omar, and Salgado-Ceballos, Hermelinda
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SPINAL cord injuries ,GENE expression ,POLYPYRROLE ,SYNAPTIC vesicles ,NEURON development - Abstract
Introduction: Spinal cord injury (SCI) can cause paralysis, for which effective therapeutic strategies have not been developed yet. The only accepted strategy for patients is rehabilitation (RB), although this does not allow complete recovery of lost functions, which makes it necessary to combine it with strategies such as plasma-synthesized polypyrrole/iodine (PPy/I), a biopolymer with different physicochemical properties than PPy synthesized by conventional methods. After SCI in rats, PPy/I promotes functional recovery. Therefore, the purpose of this study was to increase the beneficial effects of both strategies and identify which genes activate PPy/I when applied alone or in combination with a mixed scheme of RB by swimming and enriched environment (SW/EE) in rats with SCI. Methods: Microarray analysis was performed to identify mechanisms of action underlying the effects of PPy/I and PPy/I+SW/EE on motor function recovery as evaluated by the BBB scale. Results: Results showed robust upregulation by PPy/I in genes related to the developmental process, biogenesis, synapse, and synaptic vesicle trafficking. In addition, PPy/I+SW/EE increased the expression of genes related to proliferation, biogenesis, cell development, morphogenesis, cell differentiation, neurogenesis, neuron development, and synapse formation processes. Immunofluorescence analysis showed the expression of ß-III tubulin in all groups, a decreased expression of caspase-3 in the PPy/I group and GFAP in the PPy/I+SW/EE group (p < 0.05). Better preservation of nerve tissue was observed in PPy/I and PPy/SW/EE groups (p < 0.05). In the BBB scale, the control group scored 1.72 ± 0.41, animals with PPy/I treatment scored 4.23 ± 0.33, and those with PPy/I+SW/EE scored 9.13 ± 0.43 1 month after follow-up. Conclusion: Thus, PPy/I+SW/EE could represent a therapeutic alternative for motor function recovery after SCI. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
16. Genetics of Strabismus
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Whitman, Mary C., Engle, Elizabeth C., Chiang, Michael, Section editor, Albert, Daniel M., editor, Miller, Joan W., editor, Azar, Dimitri T., editor, and Young, Lucy H., editor
- Published
- 2022
- Full Text
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17. Congenital Ptosis
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Ng, John D., Steele, Eric, Section editor, Ng, John, Section editor, Albert, Daniel M., editor, Miller, Joan W., editor, Azar, Dimitri T., editor, and Young, Lucy H., editor
- Published
- 2022
- Full Text
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18. Early expression of Tubulin Beta-III in avian cranial neural crest cells
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Chacon, Jose and Rogers, Crystal D
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Biological Sciences ,Genetics ,Neurosciences ,Stem Cell Research ,Dental/Oral and Craniofacial Disease ,Pediatric ,Stem Cell Research - Nonembryonic - Non-Human ,1.1 Normal biological development and functioning ,Underpinning research ,Neurological ,Animals ,Axons ,Cell Differentiation ,Cell Movement ,Chick Embryo ,Embryonic Development ,Gene Expression Regulation ,Developmental ,Gene Regulatory Networks ,Neural Crest ,Neural Tube ,Neurogenesis ,Neurons ,Stem Cells ,Tubulin ,Vertebrates ,Tubulin Beta-III ,TUBB3 ,SOX9 ,SNAI2 ,Neural crest ,Neuron ,Clinical Sciences ,Developmental Biology - Abstract
Neural crest cells are a transient stem-like cell population that forms in the dorsal neural tube of vertebrate embryos and then migrates to various locations to differentiate into diverse derivatives such as craniofacial bone, cartilage, and the enteric and peripheral nervous systems. The current dogma of neural crest cell development suggests that there is a specific hierarchical gene regulatory network (GRN) that controls the induction, specification, and differentiation of these cells at specific developmental times. Our lab has identified that a marker of differentiated neurons, Tubulin Beta-III (TUBB3), is expressed in premigratory neural crest cells. TUBB3 has previously been identified as a major constituent of microtubules and is required for the proper guidance and maintenance of axons during development. Using the model organism, Gallus gallus, we have characterized the spatiotemporal localization of TUBB3 in early stages of development. Here we show TUBB3 is expressed in the developing neural plate, is upregulated in the pre-migratory cranial neural crest prior to cell delamination and migration, and it is maintained or upregulated in neurons in later developmental stages. We believe that TUBB3 likely has a role in early neural crest formation and migration separate from its role in neurogenesis.
- Published
- 2019
19. TUBB3 and KIF21A in neurodevelopment and disease
- Author
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Dharmendra Puri, Brenda J. Barry, and Elizabeth C. Engle
- Subjects
CFEOM ,KIF21A ,TUBB3 ,tublinopathy ,tubulin ,microtubule ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Neuronal migration and axon growth and guidance require precise control of microtubule dynamics and microtubule-based cargo transport. TUBB3 encodes the neuronal-specific β-tubulin isotype III, TUBB3, a component of neuronal microtubules expressed throughout the life of central and peripheral neurons. Human pathogenic TUBB3 missense variants result in altered TUBB3 function and cause errors either in the growth and guidance of cranial and, to a lesser extent, central axons, or in cortical neuronal migration and organization, and rarely in both. Moreover, human pathogenic missense variants in KIF21A, which encodes an anterograde kinesin motor protein that interacts directly with microtubules, alter KIF21A function and cause errors in cranial axon growth and guidance that can phenocopy TUBB3 variants. Here, we review reported TUBB3 and KIF21A variants, resulting phenotypes, and corresponding functional studies of both wildtype and mutant proteins. We summarize the evidence that, in vitro and in mouse models, loss-of-function and missense variants can alter microtubule dynamics and microtubule-kinesin interactions. Lastly, we highlight additional studies that might contribute to our understanding of the relationship between specific tubulin isotypes and specific kinesin motor proteins in health and disease.
- Published
- 2023
- Full Text
- View/download PDF
20. Gene expression and locomotor recovery in adult rats with spinal cord injury and plasma-synthesized polypyrrole/iodine application combined with a mixed rehabilitation scheme
- Author
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Angélica Coyoy-Salgado, Carlos Orozco-Barrios, Stephanie Sánchez-Torres, María Guadalupe Olayo, Guillermo Jesus Cruz, Juan Morales-Corona, Roberto Olayo, Araceli Diaz-Ruiz, Camilo Ríos, Laura Alvarez-Mejia, Rodrigo Mondragón-Lozano, Axayacatl Morales-Guadarrama, Ana Lucía Alonso-García, Omar Fabela-Sánchez, and Hermelinda Salgado-Ceballos
- Subjects
spinal cord injury ,gene expression ,VEGF ,Tubb3 ,biopolymers ,plasma-synthesized polypyrrole/iodine ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
IntroductionSpinal cord injury (SCI) can cause paralysis, for which effective therapeutic strategies have not been developed yet. The only accepted strategy for patients is rehabilitation (RB), although this does not allow complete recovery of lost functions, which makes it necessary to combine it with strategies such as plasma-synthesized polypyrrole/iodine (PPy/I), a biopolymer with different physicochemical properties than PPy synthesized by conventional methods. After SCI in rats, PPy/I promotes functional recovery. Therefore, the purpose of this study was to increase the beneficial effects of both strategies and identify which genes activate PPy/I when applied alone or in combination with a mixed scheme of RB by swimming and enriched environment (SW/EE) in rats with SCI.MethodsMicroarray analysis was performed to identify mechanisms of action underlying the effects of PPy/I and PPy/I+SW/EE on motor function recovery as evaluated by the BBB scale.ResultsResults showed robust upregulation by PPy/I in genes related to the developmental process, biogenesis, synapse, and synaptic vesicle trafficking. In addition, PPy/I+SW/EE increased the expression of genes related to proliferation, biogenesis, cell development, morphogenesis, cell differentiation, neurogenesis, neuron development, and synapse formation processes. Immunofluorescence analysis showed the expression of β-III tubulin in all groups, a decreased expression of caspase-3 in the PPy/I group and GFAP in the PPy/I+SW/EE group (p < 0.05). Better preservation of nerve tissue was observed in PPy/I and PPy/SW/EE groups (p < 0.05). In the BBB scale, the control group scored 1.72 ± 0.41, animals with PPy/I treatment scored 4.23 ± 0.33, and those with PPy/I+SW/EE scored 9.13 ± 0.43 1 month after follow-up.ConclusionThus, PPy/I+SW/EE could represent a therapeutic alternative for motor function recovery after SCI.
- Published
- 2023
- Full Text
- View/download PDF
21. Mirror Movements Due To a TUBB3 Variant.
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Desjardins, Clément, Gras, Domitille, Trouillard, Oriane, Dubacq, Caroline, Boespflug Tanguy, Odile, and Roze, Emmanuel
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- *
MIRRORS - Published
- 2023
- Full Text
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22. Tubb3 expression levels are sensitive to neuronal activity changes and determine microtubule growth and kinesin-mediated transport.
- Author
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Radwitz, Jennifer, Hausrat, Torben J., Heisler, Frank F., Janiesch, Philipp C., Pechmann, Yvonne, Rübhausen, Michael, and Kneussel, Matthias
- Abstract
Microtubules are dynamic polymers of α/β-tubulin. They regulate cell structure, cell division, cell migration, and intracellular transport. However, functional contributions of individual tubulin isotypes are incompletely understood. The neuron-specific β-tubulin Tubb3 displays highest expression around early postnatal periods characterized by exuberant synaptogenesis. Although Tubb3 mutations are associated with neuronal disease, including abnormal inhibitory transmission and seizure activity in patients, molecular consequences of altered Tubb3 levels are largely unknown. Likewise, it is unclear whether neuronal activity triggers Tubb3 expression changes in neurons. In this study, we initially asked whether chemical protocols to induce long-term potentiation (cLTP) affect microtubule growth and the expression of individual tubulin isotypes. We found that growing microtubules and Tubb3 expression are sensitive to changes in neuronal activity and asked for consequences of Tubb3 downregulation in neurons. Our data revealed that reduced Tubb3 levels accelerated microtubule growth in axons and dendrites. Remarkably, Tubb3 knockdown induced a specific upregulation of Tubb4 gene expression, without changing other tubulin isotypes. We further found that Tubb3 downregulation reduces tubulin polyglutamylation, increases KIF5C motility and boosts the transport of its synaptic cargo N-Cadherin, which is known to regulate synaptogenesis and long-term potentiation. Due to the large number of tubulin isotypes, we developed and applied a computational model based on a Monte Carlo simulation to understand consequences of tubulin expression changes in silico. Together, our data suggest a feedback mechanism with neuronal activity regulating tubulin expression and consequently microtubule dynamics underlying the delivery of synaptic cargoes. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
23. Silencing TUBB3 Expression Destroys the Tegument and Flame Cells of Echinococcus multilocularis Protoscoleces.
- Author
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Shi, Qiqi, Liu, Congshan, Huo, Lele, Tao, Yi, and Zhang, Haobing
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ECHINOCOCCUS multilocularis , *ECHINOCOCCUS granulosus , *FLAME , *NEGLECTED diseases , *TRANSMISSION electron microscopy , *SCANNING electron microscopy - Abstract
Simple Summary: Echinococcus multilocularis is a fox and carnivore tapeworm with important zoonotic potential, as the larval stage can cause alveolar echinococcosis in both humans and livestock. An understanding of the molecular mechanisms of parasite growth and development is essential for disease diagnosis, management and control. This study investigates the potential role of E. multilocularis TUBB3 in protoscoleces through RNA interference in vitro with specific short interfering RNAs. Our results show that EmTUBB3 might contribute to tegument formation and protonephridial system flame cell integrity in E. multilocularis protoscoleces. Alveolar echinococcosis (AE), caused by infection with the larvae of Echinococcus multilocularis, is a neglected tropical disease and zoonosis that causes remarkable morbidity in humans and has economic importance in the livestock industry worldwide. The growth of this parasite resembles the invasion and proliferation of malignant tumours. Microtubules, especially the β-tubulin subunit in the exposed end, are the targets of many antitumour drugs. However, the role of TUBB3, which is the most studied isotype in solid tumours and is also a marker of biological aggressiveness associated with the modulation of tumour metastatic abilities in the growth and development of platyhelminths, is unknown. In this study, protoscoleces (PSCs) are cultivated in monophasic medium in vitro. Using electroporated short interfering RNA (siRNA), EmTUBB3 knockdown was performed with two EmTUBB3-specific siRNAs (siRNA-1 and siRNA-2). qRT–PCR was performed to detect the expression of TUBB3. PSCs viability and the evagination rate and number of body contractions were quantified under a light microscope. Scanning electron microscopy (SEM) and transmission electron microscopy (TEM) were used to observe the ultra-morphological changes of the parasites. After siRNA interference, the EmTUBB3 expression in E. multilocularis PSCs was significantly reduced. Reduced viability, a decreased evagination rate and a decreased number of body contractions were also documented. In particular, shrinkage and roughness of the tegument were observed. Ultrastructural changes included marked damage to flame cells, cracked cilia structures enclosed in the cell body and ruptured microtubule structures. EmTUBB3 possibly plays a crucial role in tegument and flame cell integrity in E. multilocularis PSCs. Novel drugs targeting this specific beta-tubulin isotype in E. multilocularis are potential methods for disease control and deserve further attention. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
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24. Exosomal TUBB3 mRNA expression of metastatic castration‐resistant prostate cancer patients: Association with patient outcome under abiraterone
- Author
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Sha Zhu, Yuchao Ni, Guangxi Sun, Zilin Wang, Junru Chen, Xingming Zhang, Jinge Zhao, Xudong Zhu, Jindong Dai, Zhenhua Liu, Jiayu Liang, Haoran Zhang, Yaowen Zhang, Pengfei Shen, and Hao Zeng
- Subjects
abiraterone acetate ,exosomes ,messenger ,prostatic neoplasms ,RNA ,TUBB3 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background To use ddPCR to quantify plasma exosomal class III β‐tubulin (βIII‐tubulin, TUBB3, encoded by the TUBB3 gene) mRNA expression in metastatic castration‐resistant prostate cancer (mCRPC) patients, and study the association of this expression with abiraterone efficacy. Methods Blood samples were prospectively collected from 52 mCRPC patients using abiraterone as first‐line therapy to measure plasma exosomal TUBB3 mRNA expression value before the initiation of abiraterone. Study endpoints were PSA response rate, PSA‐progression‐free survival (PSA‐PFS), and overall survival (OS, from CRPC to death). Results Patients with positive exosomal TUBB3 expression showed shorter PSA‐PFS (negative TUBB3 vs. positive TUBB3: 11.0 vs. 7.9 months; p = 0.014). Further analysis demonstrated that patients with strongly positive exosomal TUBB3 (>20 copies/20 µl) was associated with even shorter PSA‐PFS (negative TUBB3 vs. positive TUBB3 [20 copies/20 µl]: 11.0 vs. 8.3 vs. 3.6 months, p = 0.005). In multivariate analyzes, TUBB3 (+) (HR: 2.114, p = 0.033) and ECOG score >2 (HR: 3.039, p = 0.006) were independent prognosticators of poor PSA‐PFS. PSA response and OS did not present significant differences. Conclusion The exosomal TUBB3 mRNA expression level is associated with poor PSA‐PFS of abiraterone in mCRPC patients. The detection of exosomal TUBB3 can be valuable in their management.
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- 2021
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25. SRC Kinase-Mediated Tyrosine Phosphorylation of TUBB3 Regulates Its Stability and Mitotic Spindle Dynamics in Prostate Cancer Cells.
- Author
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Alfano, Alan, Xu, Jin, Yang, Xi, Deshmukh, Dhanraj, and Qiu, Yun
- Subjects
- *
SPINDLE apparatus , *TUBULINS , *PROSTATE cancer , *CANCER cells , *TYROSINE , *PROTEIN-tyrosine kinases - Abstract
Tubulin is an integral part of the cytoskeleton and plays a pivotal role in cellular signaling, maintenance, and division. β-tubulin is also the molecular target for taxane compounds such as docetaxel (DTX) and cabazitaxel (CTX), both first-line treatments for several solid cancers. Increased expression of Class III β-tubulin (TUBB3), a primarily neural isoform of β-tubulin, correlates with taxane resistance and poor prognosis. Although tyrosine kinase c-Src has been implicated to phosphorylate β-tubulins during both hematopoietic and neural differentiation, the mechanisms by which Src modulates tubulins functions are still poorly understood. Here, we report, for the first time, that TUBB3 is phosphorylated at Tyrosine 340 (Y340) by c-SRC in prostate cancer cells. We also showed that Y340 phosphorylation regulates TUBB3 protein stability and subcellular localization. Furthermore, we demonstrated that inhibition of SRC kinase activity compromises spindle stability in mitotic cells, at least partly due to the lack of TUBB3 Y340 phosphorylation. Given the importance of TUBB3 as a clinical biomarker of poor prognosis and drug resistance, characterization of TUBB3 posttranslational regulation could potentially serve as new biomarkers for disease recurrence and/or treatment failure. [ABSTRACT FROM AUTHOR]
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- 2022
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26. TUBB3 immunostaining improves the diagnostic accuracy of oral liquid‐based cytology in squamous cell carcinoma.
- Author
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Oya, Kaori, Kondo, Yuko, Fukuda, Yasuo, Kishino, Mitsunobu, and Toyosawa, Satoru
- Subjects
- *
SQUAMOUS cell carcinoma , *CYTOLOGY , *IMMUNOSTAINING , *ORAL mucosa - Abstract
Objective: Although class III beta‐tubulin (TUBB3) is not expressed in normal epithelium, its expression in cancers of some organs has been reported. Herein, we investigated the expression pattern and expression levels of TUBB3 in oral squamous cell carcinoma (SCC), and assessed whether TUBB3 immunostaining could improve the diagnostic accuracy of oral scraping liquid‐based cytology (LBC). Methods: Paraffin sections of biopsies from 107 patients with primary SCC and 30 patients with squamous papilloma of the tongue or gingiva were immunostained for TUBB3. In addition, 15 LBC samples obtained from the study participants with SCC were immunostained for TUBB3. Seven LBC samples were false‐negative. The TUBB3 expression level in each sample was evaluated and classified as 3+, 2+, 1+, or 0. Results: TUBB3 expression was confirmed in 91.6% of paraffin‐embedded SCC specimens. Clear and diffuse positivity (2+ or above) was observed in 77.6% of the total cases. In the well‐differentiated type, tumour cells in the middle layer of the parenchyma specifically expressed TUBB3. In almost LBC samples, cancerous intermediate cells showed immunopositivity similar to that of paraffin samples, even if cellular atypia was not clear in Papanicolaou staining. Conclusions: TUBB3 immunostaining is useful for diagnosing oral SCC in scraping LBC, especially when samples consist of intermediate cells with little morphological change. Moreover, TUBB3 immunostaining could improve the diagnostic accuracy of oral scraping LBC by reducing false‐negatives. [ABSTRACT FROM AUTHOR]
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- 2022
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27. Microtubule Protein βIII-Tubulin: Structure, Expression and Functions in Normal and Tumor Cells
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I. A. Mamichev, T. A. Bogush, E. A. Bogush, N. S. Terentyeva, V. Y. Kirsanov, and M. M. Davydov
- Subjects
ß-тубулин ,tubb3 ,ß-tubulin ,microtubules ,cytoskeleton ,neoplastic transformation ,metastasis ,drug-resistance ,prognostic markers ,molecular diagnosis of malignant tumors ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
The present review contains data on microtubular protein ßIII-tubulin (TUBB3): its structure, functions, role in tumor progression, expression in normal cells and in neural and epithelial tumors of different origins. Basic working principles of microtubular system and links between TUBB3 and related β-tubulins are also briefly reviewed. We analyzed the clinical potential of TUBB3 as prognostic marker of tumor aggressiveness and drug-resistance and suggested that locally disseminated tumor cells might be found by comparison of TUBB3 expression in normal and tumor tissue of each patient. Finally, we conclude that screening for TUBB3 and other tumor markers in morphologically normal tissue adjacent to the tumor is essential for accurate diagnostics.
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- 2020
28. βIII-Tubulin Gene Regulation in Health and Disease
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Alastair M. P. Duly, Felicity C. L. Kao, Wee Siang Teo, and Maria Kavallaris
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TUBB3 ,βIII-tubulin ,microtubule ,gene regulation ,cancer ,neuronal tubulin ,Biology (General) ,QH301-705.5 - Abstract
Microtubule proteins form a dynamic component of the cytoskeleton, and play key roles in cellular processes, such as vesicular transport, cell motility and mitosis. Expression of microtubule proteins are often dysregulated in cancer. In particular, the microtubule protein βIII-tubulin, encoded by the TUBB3 gene, is aberrantly expressed in a range of epithelial tumours and is associated with drug resistance and aggressive disease. In normal cells, TUBB3 expression is tightly restricted, and is found almost exclusively in neuronal and testicular tissues. Understanding the mechanisms that control TUBB3 expression, both in cancer, mature and developing tissues will help to unravel the basic biology of the protein, its role in cancer, and may ultimately lead to the development of new therapeutic approaches to target this protein. This review is devoted to the transcriptional and posttranscriptional regulation of TUBB3 in normal and cancerous tissue.
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- 2022
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29. Targeting TUBB3 Suppresses Anoikis Resistance and Bone Metastasis in Prostate Cancer.
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Dong B, Gu Y, Sun X, Wang X, Zhou Y, Rong Z, Zhang J, Shi X, Zhang Z, He X, Chen L, Xiong Q, Pang X, and Cui Y
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- Male, Humans, Cell Line, Tumor, Animals, Mice, Epithelial-Mesenchymal Transition genetics, Nanoparticles chemistry, Cell Movement drug effects, RNA, Small Interfering genetics, Mice, Nude, Anoikis drug effects, Prostatic Neoplasms pathology, Prostatic Neoplasms metabolism, Prostatic Neoplasms genetics, Bone Neoplasms secondary, Bone Neoplasms metabolism, Bone Neoplasms pathology, Tubulin metabolism
- Abstract
Bone metastases occur in more than 70% of advanced prostate cancer (PCa) patients, leading to a poor prognosis. Resistance to detachment-induced apoptosis, also known as anoikis, plays a crucial role in the onset of tumor metastasis. Targeting anoikis resistance is of immense therapeutic significance in repression of metastatic spread. In this study, based on an anoikis-related prognostic risk model of PCa, this study identifies TUBB3 as a key anoikis-related prognostic gene that is highly expressed in bone metastatic PCa. TUBB3 expression is increased in anoikis-resistant PCa cells, and TUBB3 depletion significantly reverses anoikis resistance during extracellular matrix (ECM) detachment and inhibits anoikis-resistance-induced PCa cell invasion and migration as well as epithelial-mesenchymal transition (EMT) process. TUBB3 knockdown significantly reduces αvβ3/FAK/Src axis activation, blocking its downstream oncogenic signaling. In addition, this work develops bone-targeting lipid nanoparticles (BT-LNP) based on bisphosphonate-modified ionizable lipid for systemic delivery of siRNA targeting TUBB3 (siTUBB3). BT-LNP-delivered siTUBB3 therapy with localization in the bone microenvironment significantly attenuate PCa bone metastasis progression in vivo upon intravenous administration. These findings pinpoint that TUBB3, as a key regulator of anoikis resistance, is an effective therapeutic target in bone metastatic PCa and that BT-LNP-mediated systemic delivery of siTUBB3 can be developed as a novel therapeutic strategy for this disease., (© 2024 The Author(s). Advanced Healthcare Materials published by Wiley‐VCH GmbH.)
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- 2024
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30. Exosomal TUBB3 mRNA expression of metastatic castration‐resistant prostate cancer patients: Association with patient outcome under abiraterone.
- Author
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Zhu, Sha, Ni, Yuchao, Sun, Guangxi, Wang, Zilin, Chen, Junru, Zhang, Xingming, Zhao, Jinge, Zhu, Xudong, Dai, Jindong, Liu, Zhenhua, Liang, Jiayu, Zhang, Haoran, Zhang, Yaowen, Shen, Pengfei, and Zeng, Hao
- Subjects
GENE expression ,CASTRATION-resistant prostate cancer ,PROSTATE cancer patients ,TREATMENT effectiveness ,OVERALL survival - Abstract
Background: To use ddPCR to quantify plasma exosomal class III β‐tubulin (βIII‐tubulin, TUBB3, encoded by the TUBB3 gene) mRNA expression in metastatic castration‐resistant prostate cancer (mCRPC) patients, and study the association of this expression with abiraterone efficacy. Methods: Blood samples were prospectively collected from 52 mCRPC patients using abiraterone as first‐line therapy to measure plasma exosomal TUBB3 mRNA expression value before the initiation of abiraterone. Study endpoints were PSA response rate, PSA‐progression‐free survival (PSA‐PFS), and overall survival (OS, from CRPC to death). Results: Patients with positive exosomal TUBB3 expression showed shorter PSA‐PFS (negative TUBB3 vs. positive TUBB3: 11.0 vs. 7.9 months; p = 0.014). Further analysis demonstrated that patients with strongly positive exosomal TUBB3 (>20 copies/20 µl) was associated with even shorter PSA‐PFS (negative TUBB3 vs. positive TUBB3 [<20 copies/20 µl] vs. strongly positive TUBB3 [>20 copies/20 µl]: 11.0 vs. 8.3 vs. 3.6 months, p = 0.005). In multivariate analyzes, TUBB3 (+) (HR: 2.114, p = 0.033) and ECOG score >2 (HR: 3.039, p = 0.006) were independent prognosticators of poor PSA‐PFS. PSA response and OS did not present significant differences. Conclusion: The exosomal TUBB3 mRNA expression level is associated with poor PSA‐PFS of abiraterone in mCRPC patients. The detection of exosomal TUBB3 can be valuable in their management. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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- View/download PDF
31. Congenital Mirror Movements Associated With Brain Malformations.
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Nissenkorn, Andreea, Yosovich, Keren, Leibovitz, Zvi, Hartman, Tamar Gur, Zelcer, Itay, Hugirat, Mohammad, Lev, Dorit, Lerman-Sagie, Tally, and Blumkin, Lubov
- Subjects
- *
CORPUS callosum , *HUMAN abnormalities , *FATHER-daughter relationship , *MIRRORS , *MOTHER-son relationship - Abstract
Background: Congenital mirror movements are involuntary movements of a side of the body imitating intentional movements on the opposite side, appearing in early childhood and persisting beyond 7 years of age. Congenital mirror movements are usually idiopathic but have been reported in association with various brain malformations. Methods: We describe clinical, genetic, and radiologic features in 9 individuals from 5 families manifesting congenital mirror movements. Results: The brain malformations associated with congenital mirror movements were: dysplastic corpus callosum in father and daughter with a heterozygous p.Met1* mutation in DCC ; hypoplastic corpus callosum, dysgyria, and malformed vermis in a mother and son with a heterozygous p.Thr312Met mutation in TUBB3 ; dysplastic corpus callosum, dysgyria, abnormal vermis, and asymmetric ventricles in a father and 2 daughters with a heterozygous p.Arg121Trp mutation in TUBB; hypoplastic corpus callosum, dysgyria, malformed basal ganglia and abnormal vermis in a patient with a heterozygous p.Glu155Asp mutation in TUBA1A ; hydrocephalus, hypoplastic corpus callosum, polymicrogyria, and cerebellar cysts in a patient with a homozygous p.Pro312Leu mutation in POMGNT1. Conclusion: DCC, TUBB3, TUBB, TUBA1A, POMGNT1 cause abnormal axonal guidance via different mechanisms and result in congenital mirror movements associated with brain malformations. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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32. Tubulin mutations in neurodevelopmental disorders as a tool to decipher microtubule function.
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Fourel, Geneviève and Boscheron, Cécile
- Subjects
- *
TUBULINS , *MICROTUBULES , *CELL populations , *CHILDHOOD epilepsy , *MISSENSE mutation , *INTELLECTUAL disabilities , *HETERODIMERS - Abstract
Malformations of cortical development (MCDs) are a group of severe brain malformations associated with intellectual disability and refractory childhood epilepsy. Human missense heterozygous mutations in the 9 α‐tubulin and 10 β‐tubulin isoforms forming the heterodimers that assemble into microtubules (MTs) were found to cause MCDs. However, how a single mutated residue in a given tubulin isoform can perturb the entire microtubule population in a neuronal cell remains a crucial question. Here, we examined 85 MCD‐associated tubulin mutations occurring in TUBA1A, TUBB2, and TUBB3 and their location in a three‐dimensional (3D) microtubule cylinder. Mutations hitting residues exposed on the outer microtubule surface are likely to alter microtubule association with partners, while alteration of intradimer contacts may impair dimer stability and straightness. Other types of mutations are predicted to alter interdimer and lateral contacts, which are responsible for microtubule cohesion, rigidity, and dynamics. MCD‐associated tubulin mutations surprisingly fall into all categories, thus providing unexpected insights into how a single mutation may impair microtubule function and elicit dominant effects in neurons. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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33. TUBB3 Is Associated with High-Grade Histology, Poor Prognosis, p53 Expression, and Cancer Stem Cell Markers in Clear Cell Renal Cell Carcinoma.
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Sekino, Yohei, Han, Xiangrui, Babasaki, Takashi, Miyamoto, Shunsuke, Kitano, Hiroyuki, Kobayashi, Go, Goto, Keisuke, Inoue, Shogo, Hayashi, Tetsutaro, Teishima, Jun, Sakamoto, Naoya, Sentani, Kazuhiro, Oue, Naohide, Yasui, Wataru, and Matsubara, Akio
- Subjects
- *
CONFIDENCE intervals , *GENE expression , *HISTOLOGY , *NERVE tissue proteins , *RENAL cell carcinoma , *STATISTICS , *STEM cells , *T-test (Statistics) , *TUMOR markers , *MULTIPLE regression analysis , *DATA analysis software , *DESCRIPTIVE statistics , *MANN Whitney U Test - Abstract
Background: βIII-Tubulin, encoded by the TUBB3 gene, is a microtubule protein. Several studies have shown that overexpression of TUBB3 is linked to poor prognosis and is involved in taxane resistance in some cancers. Objective: The aim of this study was to analyze the expression and function of TUBB3 in clear cell renal cell carcinoma (ccRCC). Methods: The expression of TUBB3 was determined using immuno-histochemistry in ccRCC specimens. The effects of TUBB3 knockdown on cell growth and invasion were evaluated in RCC cell lines. We analyzed the interaction between TUBB3, p53, cancer stem cell markers, and PD-L1. Results: In 137 cases of ccRCC, immunohistochemistry showed that 28 (20%) of the ccRCC cases were positive for TUBB3. High TUBB3 expression was significantly correlated with high nuclear grade, high T stage, and N stage. A Kaplan-Meier analysis showed that high expression of TUBB3 was associated with poor overall survival after nephrectomy. In silico analysis also showed that high TUBB3 expression was correlated with overall survival. Knockdown of TUBB3 suppressed cell growth and invasion in 786-O and Caki-1 cells. High TUBB3 expression was associated with CD44, CD133, PD-L1, and p53 in ccRCC. We generated p53 knockout cells using the CRISPR-Cas9 system. Western blotting revealed that p53 knockout upregulated the expression of TUBB3. Conclusion: These results suggest that TUBB3 may play an oncogenic role and could be a potential therapeutic target in ccRCC. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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34. Investigation of the most common clinical and imaging findings and the role of tubulin genes in the etiology of malformations of cortical development.
- Author
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KILIÇARSLAN, Özge AKSEL, ATAMAN, Esra, GÜRSOY, Semra, GÜRBÜZ, Gürkan, ÜNALP, Aycan, GENÇPINAR, Pınar, DÜNDAR, Nihal OLGAÇ, EDİZER, Selvinaz, ÜLGENALP, Ayfer, and BOZKAYA, Özlem GİRAY
- Subjects
- *
AGENESIS of corpus callosum , *ETIOLOGY of diseases , *GENETIC mutation , *HUMAN abnormalities , *DIAGNOSTIC imaging , *GENETIC counseling - Abstract
Background and aim: The number of reports on the role of tubulin gene mutations (TUBA1A, TUBB2B, and TUBB3) in etiology of malformations of cortical development has peaked in recent years. We aimed to determine tubulin gene defects on a patient population with simple and complex malformations of cortical development, and investigate the relationship between tubulin gene mutations and disease phenotype. Materials and methods: We evaluated 47 patients with simple or complex malformations of cortical development, as determined by radiological examination, for demographic features, clinical findings and mutations on TUBA1A, TUBB2B, and TUBB3 genes. Results: According to the magnetic resonance imaging findings, 19 patients (40.5%) had simple malformations of cortical development and 28 (59.5%) patients had complex malformations of cortical development. Focal cortical dysplasia was the most common simple malformation, lissencephaly was the most common coexisting cortical malformation, and corpus callosum anomalies were the most common coexisting extracortical neurodevelopmental abnormalities. None of the patients had genetic alterations on TUBA1A, TUBB2B, and TUBB3 genes causing protein dysfunction. On the other hand, the frequencies of some polymorphisms were higher when compared to the literature. Conclusion: It is crucial to identify the etiology in patients with malformations of cortical development in order to provide appropriate genetic counseling and prenatal diagnosis. We consider that multicenter studies with higher patient numbers and also including other malformations of cortical development-related genes are required to determine underlying etiological factors of malformations of cortical development patients. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
35. miR‐200b‐3p mitigates oxaliplatin resistance via targeting TUBB3 in colorectal cancer.
- Author
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Wu, Yu‐Zhu, Lin, Hong‐Yue, Zhang, Yin, and Chen, Wen‐Fa
- Abstract
Background: Numerous abnormally expressed miRs have been reported involved in oxaliplatin (L‐OHP) resistance of colorectal cancer (CRC). The present study aimed to investigate whether miR‐200b‐3p could regulate L‐OHP resistance via targeting TUBB3 in CRC cells. Methods: L‐OHP resistant HT29 and HCT116 cells were exposed to escalating concentrations of L‐OHP up to 30 μm. The effect of miR‐200b‐3p on L‐OHP resistant CRC cells was then evaluated using the cell counting kit‐8 (CCK‐8) assay. CRC cell apoptosis was detected using Annexin V‐FITC/PI double staining. Bioinformatics algorithms and luciferase reporter assays were also performed to investigate whether TUBB3 was a direct target of miR‐200b‐3p. Results: miR‐200b‐3p declined in L‐OHP resistant CRC tissues and cell lines, and the overexpression of miR‐200b‐3p elevated the L‐OHP sensitivity in L‐OHP resistant HT29 and HCT116 cells. In addition, we determined the potential mechanisms underlying miR‐200b‐3p‐mediated reversal of L‐OHP resistance by mediating its downstream target TUBB3, and the overexpression of miR‐200b‐3p could induce migration and growth inhibition and apoptosis in L‐OHP resistant HT29 and HCT116 cells by silencing βIII‐tubulin protein expression. However, the overexpression of TUBB3 reversed miR‐200b‐3p mimic‐induced migration, as well as growth inhibition and apoptosis, in L‐OHP resistant CRC cells. Conclusions: miR‐200b‐3p improved L‐OHP resistance and induced growth inhibition and cell apoptosis in L‐OHP resistant CRC cells, and the underlying mechanism was mediated, at least partially, through the suppression of βIII‐tubulin protein expression. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
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36. Autosomal dominant TUBB3-related syndrome: Fetal, radiologic, clinical and morphological features.
- Author
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Blumkin, Lubov, Leibovitz, Zvi, Krajden-Haratz, Karina, Arad, Ayala, Yosovich, Keren, Gindes, Liat, Zerem, Ayelet, Ben-Sira, Liat, Lev, Dorit, Nissenkorn, Andrea, Kidron, Dvora, Dobyns, William B., Malinger, Gustavo, Bahi-Buisson, Nadia, Leventer, Richard J., and Lerman-Sagie, Tally
- Subjects
FETAL brain ,NEMALINE myopathy ,CORPUS callosum ,AGENESIS of corpus callosum ,MUSCLE weakness ,DEVELOPMENTAL delay ,MOTHER-son relationship - Abstract
To describe fetal, clinical, radiological, morphological features of TUBB3 related syndrome. We report two families each of two generations harboring a novel and a previously described heterozygous TUBB3 pathogenic variants. We compared these patients with other published TUBB3 -related cases. We describe the pathological features of dysgyria in the two aborted fetuses. The mother and son from family 1 had a history of mild developmental delay in motor and language skills and demonstrated mild cerebellar signs and mirror movements. Neuroimaging findings included: hypoplastic corpus callosum (CC), asymmetric ventriculomegaly and cerebellar vermis hypoplasia in all patients and frontal dysgyria in three. Autopsy of the fetal brain showed an unusual shape and orientation of the frontal sulci and gyri with normal cortical layering and no abnormal cell types. The mother of family 2 had congenital strabismus, mild muscle weakness on the right and a past history of developmental delay. Fetal brain MRI showed abnormal cerebral sulcation, hemispheric asymmetry, asymmetric ventriculomegaly, dysmorphic short CC and frontal cortical interdigitation. Autopsy demonstrated fronto-parietal predominant dysgyria, bilateral ventriculomegaly, hippocampal and CC hypoplasia, abnormal Sylvian fissure. Lamination and neuron morphology in the areas of dysgyria were normal. TUBB3 related cortical malformations can be mild, consistent with dysgyria rather than typical pachygyria or polymicrogyria. The autopsy findings in fetal TUBB3 related dysgyria are abnormal orientation of sulci and gyri, but normal neuron morphology and layering. We suggest that TUBB3 – associated brain malformations can be suspected in-utero which in turn can aid in prognostic counselling and interpretation of genetic testing. • We report clinical, radiological and morphological features of TUBB3 related syndrome. • We describe for the first time the pathological features of dysgyria. • We define "tubulin associated dysgyrias" as a gyral irregularity and sulcal misorientation with normal cortical layering. • TUBB3 related cortical malformations can be mild, consistent with dysgyria rather than typical pachygyria or polymicrogyria. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
37. Axonal precursor miRNAs hitchhike on endosomes and locally regulate the development of neural circuits.
- Author
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Corradi, Eloina, Dalla Costa, Irene, Gavoci, Antoneta, Iyer, Archana, Roccuzzo, Michela, Otto, Tegan A, Oliani, Eleonora, Bridi, Simone, Strohbuecker, Stephanie, Santos‐Rodriguez, Gabriela, Valdembri, Donatella, Serini, Guido, Abreu‐Goodger, Cei, and Baudet, Marie‐Laure
- Subjects
- *
NEURAL circuitry , *NEURAL development , *MICRORNA , *AMYLOID beta-protein precursor , *NON-coding RNA , *AXONS , *MELANOPSIN , *LYSOSOMES - Abstract
Various species of non‐coding RNAs (ncRNAs) are enriched in specific subcellular compartments, but the mechanisms orchestrating their localization and their local functions remain largely unknown. We investigated both aspects using the elongating retinal ganglion cell axon and its tip, the growth cone, as models. We reveal that specific endogenous precursor microRNAs (pre‐miRNAs) are actively trafficked to distal axons by hitchhiking primarily on late endosomes/lysosomes. Upon exposure to the axon guidance cue semaphorin 3A (Sema3A), pre‐miRNAs are processed specifically within axons into newly generated miRNAs, one of which, in turn, silences the basal translation of tubulin beta 3 class III (TUBB3), but not amyloid beta precursor protein (APP). At the organismal level, these mature miRNAs are required for growth cone steering and a fully functional visual system. Overall, our results uncover a novel mode of ncRNA transport from one cytosolic compartment to another within polarized cells. They also reveal that newly generated miRNAs are critical components of a ncRNA‐based signaling pathway that transduces environmental signals into the structural remodeling of subcellular compartments. Synopsis: Mechanisms regulating subcellular localization and local function of non‐coding RNA are not well understood. Here, neuronal pre‐miRNAs are found to traffic along axons docked to endosomes, with axonal processing of pre‐miRNAs leading to the inhibition of local protein synthesis. Precursor miRNAs hitchhike onto late endosomes/lysosomes to reach the growth cone.Sema3A, but not Slit2, axon guidance cue induces local biogenesis of specific miRNAs within axons.Newly generated miRNAs inhibit basal translation of TUBB3 but not APP upon Sema3A exposure.miRNAs regulate growth cone steering and the establishment of functional connections. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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- View/download PDF
38. A modified natural small molecule inhibits triple-negative breast cancer growth by interacting with Tubb3.
- Author
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Han, Hongwei, Yang, Minkai, Wen, Zhongling, Wang, Xuan, Lai, Xiaohui, Zhang, Yahan, Fang, Rongjun, Yin, Tongming, Yang, Xiaorong, Wang, Xiaoming, Zhao, Quan, Qi, Jinliang, Chen, Hongyuan, Lin, Hongyan, and Yang, Yonghua
- Abstract
Triple-negative breast cancer (TNBC) is a malignant tumor without specific therapeutic targets and a poor prognosis. Chemotherapy is currently the first-line therapeutic option for TNBC. However, due to the heterogeneity of TNBC, not all of TNBC patients are responsive to chemotherapeutic agents. Therefore, the demand for new targeted agents is critical. β -tubulin isotype III (Tubb3) is a prognostic factor associated with cancer progression, including breast cancer, and targeting Tubb3 may lead to improve TNBC disease control. Shikonin, the active compound in the roots of Lithospermun erythrorhizon suppresses the growth of various types of tumors, and its efficacy can be improved by altering its chemical structure. In this work, the anti-TNBC effect of a shikonin derivative (PMMB276) was investigated, and its mechanism was also investigated. This study combines flow cytometry, immunofluorescence staining, immunoblotting, immunoprecipitation, siRNA silencing, and the iTRAQ proteomics assay to analyze the inhibition potential of PMMB276 on TNBC. In vivo study was performed, Balb/c female murine models with or without the small molecule treatments. Herein, we screened 300 in-house synthesized analogs of shikonin against TNBC and identified a novel small molecule, PMMB276; it suppressed cell proliferation, induced apoptosis, and arrested the cell cycle at the G2/M phase, suggesting that it could have a tumor suppressive role in TNBC. Tubb3 was identified as the target of PMMB276 using proteomic and biological activity analyses. Meanwhile, PMMB276 regulated microtubule dynamics in vitro by inducing microtubule depolymerization and it could act as a tubulin stabilizer by a different process than that of paclitaxel. Moreover, suppressing or inhibiting Tubb3 with PMMB276 reduced the growth of breast cancer in an experimental mouse model, indicating that Tubb3 plays a significant role in TNBC progression. The findings support the therapeutic potential of PMMB276, a Tubb3 inhibitor, as a treatment for TNBC. Our findings might serve as a foundation for the utilization of shikonin and its derivatives in the development of anti-TNBC. A small novel molecule, i.e., α-lipoic acyl shikonin, modified form of a natural product (shikonin), acts as a novel inhibitor of Tubb3. [Display omitted] [ABSTRACT FROM AUTHOR]
- Published
- 2024
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39. A Case Report Demonstrating the Potential Clinical Benefit of Exhaustive Molecular Profiling in an Aggressive Muscle-Invasive High-Grade Metastatic Urothelial Carcinoma
- Author
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Amaya Ramírez de Olano, Joaquim Bellmunt, Ana Rodrigo, Luis Álvarez, Adriana Terrádez, Jesús García-Foncillas, and Jean-François Laes
- Subjects
Urothelial carcinoma ,RB1 ,TOP2A ,TUBB3 ,Adriamycin ,Abraxane ,Next-generation sequencing ,Immunohistochemistry ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
We present a muscle-invasive high-grade metastatic urothelial carcinoma patient, aged 71 years, with rapid progression from the diagnosis and a poor prognosis after 3 lines of treatment. A clinical exhaustive genomic profile was performed with the goal of finding potential actionable molecular alterations. The patient showed significant symptomatic and laboratory improvement with a nonstandard chemotherapy combination treatment identified by the molecular profiling, which would otherwise not have been considered. This approach illustrates the clinical benefit of a comprehensive genomic analysis in an aggressive and refractory urothelial carcinoma.
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- 2017
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40. ALDH1A1 in patient‐derived bladder cancer spheroids activates retinoic acid signaling leading to TUBB3 overexpression and tumor progression.
- Author
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Namekawa, Takeshi, Ikeda, Kazuhiro, Horie‐Inoue, Kuniko, Suzuki, Takashi, Okamoto, Koji, Ichikawa, Tomohiko, Yano, Akihiro, Kawakami, Satoru, and Inoue, Satoshi
- Subjects
BLADDER cancer ,TRETINOIN ,RETINOIC acid receptors ,CANCER invasiveness ,ALDEHYDE dehydrogenase ,DRUG resistance in cancer cells ,CANCER cells - Abstract
Acquired chemoresistance is a critical issue for advanced bladder cancer patients during long‐term treatment. Recent studies reveal that a fraction of tumor cells with enhanced tumor‐initiating potential, or cancer stem‐like cells (CSCs), may particularly contribute to acquired chemoresistance and recurrence. Thus, CSC characterization will be the first step towards understanding the mechanisms underlying advanced disease. Here we generated long‐term patient‐derived cancer cells (PDCs) from bladder cancer patient specimens in spheroid culture, which is favorable for CSC enrichment. Pathological features of bladder cancer PDCs and PDC‐dependent patient‐derived xenografts (PDXs) were basically similar to those of their corresponding patients' specimens. Notably, CSC marker aldehyde dehydrogenase 1A1 (ALDH1A1), a critical enzyme that synthesizes retinoic acid (RA), was abundantly expressed in PDCs. ALDH1A1 inhibitors and shRNAs repressed both PDC proliferation and spheroid formation, whereas all‐trans RA could rescue ALDH1A1 shRNA‐suppressed spheroid formation. ALDH inhibitor also reduced the in vivo growth of PDC‐derived xenografts. ALDH1A1 knockdown study showed that tubulin beta III (TUBB3) was one of the downregulated genes in PDCs. We identified functional RA response elements in TUBB3 promoter, whose transcriptional activities were substantially activated by RA. Clinical survival database reveals that TUBB3 expression may associate with poor prognosis in bladder cancer patients. Moreover, TUBB3 knockdown was sufficient to suppress PDC proliferation and spheroid formation. Taken together, our results indicate that ALDH1A1 and its putative downstream target TUBB3 are overexpressed in bladder cancer, and those molecules could be applied to alternative diagnostic and therapeutic options for advanced disease. What's new? Cancer stem‐like cells can contribute to acquired chemoresistance. Studying the characteristics of these cells could yield new ways to thwart chemoresistance. Here, the authors generated 3D cell cultures from patient‐derived bladder cancer cells. They found the cells produced an abundance of aldehyde dehydrogenase 1A1 (ALDH1A1), a stem cell marker. By inhibiting ALDH1A1, they repressed proliferation and spheroid formation. Adding retinoic acid at least partly restored proliferation in ALDH1A1 knockdowns. They also showed that knocking down TUBB3, a target of retinoic acid receptor alpha, likewise repressed proliferation. Thus, they suggest, ALDH1A1 and TUBB3 could be promising therapeutic targets. [ABSTRACT FROM AUTHOR]
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- 2020
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41. 2,3′,4,4′,5-Pentachlorobiphenyl induced autophagy of the thyrocytes via DAPK2/PKD/VPS34 pathway.
- Author
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Zhou, Qi, Wang, Li, Chen, Huanhuan, Xu, Bojin, Xu, Wenli, Sheng, Yunlu, and Duan, Yu
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AUTOPHAGY , *TUBULINS , *SMALL interfering RNA , *PROTEIN kinases , *TRANSMISSION electron microscopy , *PROTEIN expression - Abstract
2,3′,4,4′,5-Pentachlorobiphenyl (PCB118) has been shown to cause thyroidal ultrastructure lesions, but the underlying mechanism remains elusive. This study aimed to elucidate the mechanism by which PCB118 induces the abnormalities of the thyrocytes. Wistar rats were injected intraperitoneally with PCB118 (0, 10, 100 and 1000 μg/kg/d) for 13 weeks, and FRTL-5 cells were treated with PCB118 (0, 0.25, 2.5 and 25 nM). Transmission electron microscopy showed typical autophagosomes in the thyroid of PCB118-treated rats. Immunofluorescence staining showed dose-dependent increase of autophagy in FRTL-5 cells exposed to PCB118. In vivo and vitro studies found that Tubulin beta 3 class III (Tubb3) mRNA and protein levels decreased significantly, while Death-associated protein kinase 2 (DAPK2) increased after PCB118 exposure, and the binding between Tubb3 and DAPK2 was enhanced by PCB118 in a dose-dependent manner. Moreover, PCB118 resulted in the upregulation of Protein kinase D (PKD) and downregulation of Phosphatidylinositol 3-kinase (VPS34) in mRNA levels, and the activation of PKD and VPS34 phosphorylation. Additionally, Tubb3 small interfering RNA (siTubb3) suppressed DAPK2 protein expression and PKD phosphorylation in FRTL-5 cells, while VPS34 phosphorylation was inhibited by siPKD. Furthermore, DAPK2, PKD and VPS34 were upregulated by Tubb3 overexpression following PCB118 exposure. Our results demonstrate that low concentrations of PCB118 could promote thyroid autophagy formation and cause the abnormalities in thyroidal ultrastructure, and these effects are likely to be mediated by DAPK2/PKD/VPS34 dependent pathway. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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42. Selectively high efficacy of eribulin against high-grade invasive recurrent and/or metastatic squamous cell carcinoma of the head and neck.
- Author
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Kobayashi, Yutaka, Kitahara, Hiroko, Hirai, Mariko, Tanaka, Akira, Jokaji, Rei, Kobayashi, Kazuhiko, Bou-Gharios, George, Nakamura, Hiroyuki, and Kawashiri, Shuichi
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SQUAMOUS cell carcinoma , *ERIBULIN , *THERAPEUTICS - Abstract
Patients with recurrent and/or metastatic squamous cell carcinoma of the head and neck (R/M SCCHN) have a poor prognosis. Over the past decade, a major development in the first-line treatment of R/M SCCHN was the introduction of cetuximab in combination with platinum plus 5-fluorouracil chemotherapy. Currently, a promising novel treatment option in R/M SCCHN has emerged, termed immune checkpoint inhibitors. However, only a few patients presenting with R/M SCCHN have exhibited meaningful tumor regression with these agents. Therefore, novel agents are required to order improve the overall survival of patients with R/M SCCHN. Recently, we demonstrated that R/M SCCHN cells are highly sensitive to eribulin. In the present study, the effects of eribulin, paclitaxel and vinblastine were investigated in R/M SCCHN (OLC-01 and OSC-19) and locally advanced SCCHN (OSC-20) cells. Tumour-inhibitory activities of eribulin against R/M SCCHN were evaluated in orthotopic xenograft models. The data revealed that eribulin has sub-nM growth inhibitory activities in vitro against OLC-01 cells, and that it is more potent than paclitaxel and vinblastine. The reduced expression of Tubulin Beta 3 Class III (TUBB3) following treatment was correlated with a high sensitivity to eribulin. Histological analysis of OLC-01 cells in NOD-SCID mice demonstrated that they had a higher invasiveness in the tissue around the alveolar cancer when compared with the histology of OSC-19 cells, which has been reported in our previous study. Treatment with eribulin revealed marked inhibitory activities in vivo at 0.125 mg/kg against OLC-01 cells orthotopic xenografts. In conclusion, the results highlight the existence of invasive-type heterogeneity in R/M SCCHN with respect to eribulin sensitivity. Eribulin is already an approved clinical agent; therefore, the continued investigation of its preclinical antitumor attributes may contribute significantly to the future process of identifying novel uses of eribulin against R/M SCCHN. [ABSTRACT FROM AUTHOR]
- Published
- 2019
43. The regulation of survival and differentiation of neural stem cells by miR-124 via modulating PAX3.
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Wei, Chunxia, Ren, Lanfen, Li, Kui, and Lu, Zuneng
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SURVIVAL , *NEURAL stem cells , *MICRORNA , *DEVELOPMENTAL neurobiology , *CELL proliferation - Abstract
MicroRNAs (miRNAs) have crucial functions in the regulation of proliferation and differentiation of neural stem cells (NSCs). MiR-124 has been reported to be implicated in neurogenesis. However, the precise function and mechanism of miR-124 still need further verification. In this study, we identified paired box 3 (PAX3) as a potential target of miR-124 using bioinformatics approaches. Next, we found PAX3 had reversed expression pattern with miR-124 as well as TUBB3 and GFAP. Dual-luciferase assay showed that miR-124 could bind to the 3′-UTR of PAX3 mRNA and restrain its expression. It was demonstrated that overexpression and knocking down of miR-124 in NSCs could promote the survival and suppress the apoptosis of NSCs. Meanwhile, miR-124 enhanced the expression of TUBB3 and GFAP via impairing PAX3 expression. Mechanistic study revealed that augmented Akt-GSK3β signaling pathway was the driving-force for the regulatory functions of miR-124 in NSCs. In summary, this study for the first time uncovered that miR-124 could suppress PAX3 expression, which in turn regulated the differentiation of NSCs. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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44. Human TUBB3 Mutations Disrupt Netrin Attractive Signaling.
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Huang, Huai, Yang, Tao, Shao, Qiangqiang, Majumder, Tanushree, Mell, Kristopher, and Liu, Guofa
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MISSENSE mutation , *NEURODEGENERATION , *NETRINS , *NERVOUS system , *CELLULAR signal transduction - Abstract
Heterozygous missense mutations in human TUBB3 gene result in a spectrum of brain malformations associated with defects in axon guidance, neuronal migration and differentiation. However, the molecular mechanisms underlying mutation-related axon guidance abnormalities are unclear. Recent studies have shown that netrin-1, a canonical guidance cue, induced the interaction of TUBB3 with the netrin receptor deleted in colorectal cancer (DCC). Furthermore, TUBB3 is required for netrin-1-induced axon outgrowth, branching and pathfinding. Here, we provide evidence that TUBB3 mutations impair netrin/DCC signaling in the developing nervous system. The interaction of DCC with most TUBB3 mutants (eight out of twelve) is significantly reduced compared to the wild-type TUBB3. TUBB3 mutants R262C and A302V exhibit decreased subcellular colocalization with DCC in the growth cones of primary neurons. Netrin-1 increases the interaction of endogenous DCC with wild-type human TUBB3, but not R262C or A302V, in primary neurons. Netrin-1 also increases co-sedimentation of DCC with polymerized microtubules (MTs) in primary neurons expressing the wild-type TUBB3, but not R262C or A302V. Expression of either R262C or A302V not only suppresses netrin-1-induced neurite outgrowth, branching and attraction in vitro , but also causes defects in spinal cord commissural axon (CA) projection and pathfinding in ovo . Our study reveals that missense TUBB3 mutations specifically disrupt netrin/DCC-mediated attractive signaling. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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45. Identification of Novel Biomarkers Related to Lung Squamous Cell Carcinoma Using Integrated Bioinformatics Analysis
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Haiyan Wang, Jing Ji, Zhen Wang, Lizhi Huang, Yuanyuan Zheng, and Li Chen
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Integrins ,Lung Neoplasms ,Article Subject ,Bioinformatics analysis ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Computational biology ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Tubulin ,Databases, Genetic ,Plasminogen Activator Inhibitor 1 ,Biomarkers, Tumor ,medicine ,Carcinoma ,Humans ,Gene Regulatory Networks ,Protein Interaction Maps ,RNA, Messenger ,Epithelial Sodium Channels ,Gene ,TUBB3 ,General Immunology and Microbiology ,Gene Expression Profiling ,Applied Mathematics ,Carcinoma in situ ,Lung squamous cell carcinoma ,Computational Biology ,General Medicine ,Prognosis ,medicine.disease ,Gene Expression Regulation, Neoplastic ,Gene expression profiling ,Modeling and Simulation ,Ppi network ,Carcinoma, Squamous Cell ,Research Article - Abstract
Background. Lung squamous cell carcinoma (LUSC) is one of the most common types of lung carcinoma and has specific clinicopathologic characteristics. In this study, we screened novel molecular biomarkers relevant to the prognosis of LUSC to explore new diagnostic and treatment approaches for this disease. Methods. We downloaded GSE73402 from the Gene Expression Omnibus (GEO) database. GSE73402 contains 62 samples, which could be classified as four subtypes according to their pathology and stages. Via weighted gene coexpression network analysis (WGCNA), the main module was identified and was further analyzed using differentially expressed genes (DEGs) analysis. Then, by protein-protein interaction (PPI) network and Gene Expression Profiling Interactive Analysis (GEPIA), hub genes were screened for potential biomarkers of LUSC. Results. Via WGCNA, the yellow module containing 349 genes was identified, and it is strongly related to the subtype of CIS (carcinoma in situ). DEGs analysis detected 180 genes that expressed differentially between the subtype of CIS and subtype of early-stage carcinoma (Stage I and Stage II). A PPI network of DEGs was constructed, and the top 20 genes with the highest correlations were selected for GEPIA database to explore their effect on LUSC survival prognosis. Finally, ITGA5, TUBB3, SCNN1B, and SERPINE1 were screened as hub genes in LUSC. Conclusions. ITGA5, TUBB3, SCNN1B, and SERPINE1 may have great diagnostic and prognostic significance for LUSC and have great potential to be new treatment targets for LUSC.
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- 2021
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46. Comprehensive expressional analysis of chemosensitivity‐related markers in large cell neuroendocrine carcinoma of the lung
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Osamu Kawashima, Toshiki Yajima, Ken Shirabe, Hitoshi Igai, Yoichi Ohtaki, Ryoichi Onozato, Kyoichi Kaira, Bilguun Erkhem-Ochir, Seshiru Nakazawa, Takashi Ibe, Toshiteru Nagashima, Tetsunari Oyama, Takayuki Kosaka, and Mitsuhiro Kamiyoshihara
- Subjects
Adult ,Male ,Vascular Endothelial Growth Factor A ,Pulmonary and Respiratory Medicine ,topoisomerase II ,Lung Neoplasms ,Antineoplastic Agents ,thymidylate synthase ,Thymidylate synthase ,Disease-Free Survival ,chemistry.chemical_compound ,Immune system ,Tubulin ,Biomarkers, Tumor ,Humans ,Medicine ,Lung cancer ,large cell neuroendocrine carcinoma ,RC254-282 ,Aged ,Retrospective Studies ,Aged, 80 and over ,TUBB3 ,biology ,business.industry ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Original Articles ,General Medicine ,Middle Aged ,Large cell neuroendocrine carcinoma of the lung ,medicine.disease ,Carcinoma, Neuroendocrine ,Vascular endothelial growth factor ,chemosensitivity ,lung cancer ,Lymphatic system ,Oncology ,chemistry ,Tumor progression ,Cancer research ,biology.protein ,Female ,Original Article ,business ,DNA Topoisomerases - Abstract
Objectives Various drug‐sensitivity markers have been reported to be associated with tumor progression and chemotherapy resistance. Detailed expression profiles of sensitivity markers for cytotoxic chemotherapy in pulmonary large cell neuroendocrine carcinoma (LCNEC) remain unclear. Herein, we aimed to clarify the correlation between the expression of drug‐sensitivity markers and clinicopathological features, prognostic impact, and status of tumor immunity in patients with LCNEC. Methods We retrospectively analyzed the correlation between clinicopathological features and the expression of drug‐sensitivity‐related markers, including vascular endothelial growth factor 2 (VEGFR2), thymidylate synthase (TS), tubulin beta 3 class III (TUBB3), topoisomerase I (Topo‐I), and Topo‐II in 92 surgically resected LCNEC samples. Furthermore, we examined the prognostic significance of expression of these and their correlation with the immune cell status. Results Overall, high expression of TS, TUBB3, VEGFR2, Topo‐I, and Topo‐II was detected in 50 (54%), 31 (34%), 23 (25%), 65 (71%), and 36 (39%) samples, respectively. Univariate and multivariate analyses revealed that advanced pathological T and N factors, positive lymphatic permeation, and Topo‐II expression were independent unfavorable prognosticators for recurrence‐free survival, and advanced pathological T and N factors, Topo‐II positive expression, and TS positive expression were independent unfavorable prognosticators for overall survival. In terms of correlation with immune cell status, higher expression of VEGFR2 was closely linked to negative PD‐L1 expression. Conclusions These findings suggest that elevated Topo‐II and TS expression may contribute to poor outcomes through protumoral biology in patients with LCNEC, and elevated VEGFR2 expression might negatively impact tumor immune reactions in LCNEC., High expression of chemosensitive markers such as Topo‐II and TS may be responsible for the poor prognosis of LCNEC patients. Furthermore, VEGFR2 expression is negatively correlated with antitumor immune response and may not be just a chemosensitive marker. The expression of chemosensitive markers is an important prognostic factor for LCNEC and may be a biomarker of resistance to overall treatment of lung cancer, such as immune checkpoint inhibitors.
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- 2021
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47. Experimental Verification on the Hypothesis about the Possibility of Molecular Diagnostics of Local Tumor Spread on the Lewis Lung Carcinoma Model
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A. N. Grishanina, E. A. Bogush, A. A. Kamensky, O. M. Ryabinina, T. A. Bogush, A. A. Basharina, N. S. Saprykina, M. A. Maiak, and V. S. Kosorukov
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Pathology ,medicine.medical_specialty ,TUBB3 ,medicine.diagnostic_test ,biology ,Chemistry ,Lewis lung carcinoma ,General Chemistry ,Molecular diagnostics ,Malignancy ,medicine.disease ,Immunofluorescence ,Flow cytometry ,Transplantation ,Tubulin ,medicine ,biology.protein - Abstract
Expression of tumor-associated protein beta-III tubulin (TUBB3) was evaluated quantitatively by immunofluorescence analysis using flow cytometry in lung tissue of intact animals and on day 11 after the Lewis lung carcinoma transplantation as well in lung metastasis tissue and in visually “normal” surrounding tissue. It was shown that the tumor is characterized by a high TUBB3 expression, while also the expression of the marker was detected in both variants of visually normal lung tissue: it was lower than in tumor tissue but significantly higher than in lung tissue of intact animals. The detection of TUBB3 outside the tumor indicates that the tissue appeared to be normal has already involved in malignancy and this supports the hypothesis that tumor-associated protein TUBB3 can be used as a molecular marker of local tumor spread.
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- 2021
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48. Epilepsy in Tubulinopathy: Personal Series and Literature Review
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Romina Romaniello, Claudio Zucca, Filippo Arrigoni, Paolo Bonanni, Elena Panzeri, Maria T. Bassi, and Renato Borgatti
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tubulin genes ,epilepsy ,malformations cortical development ,EEG ,TUBA1A ,TUBB2B ,TUBB3 ,Cytology ,QH573-671 - Abstract
Mutations in tubulin genes are responsible for a large spectrum of brain malformations secondary to abnormal neuronal migration, organization, differentiation and axon guidance and maintenance. Motor impairment, intellectual disability and epilepsy are the main clinical symptoms. In the present study 15 patients from a personal cohort and 75 from 21 published studies carrying mutations in TUBA1A, TUBB2B and TUBB3 tubulin genes were evaluated with the aim to define a clinical and electrophysiological associated pattern. Epilepsy shows a wide range of severity without a specific pattern. Mutations in TUBA1A (60%) and TUBB2B (74%) and TUBB3 (25%) genes are associated with epilepsy. The accurate analysis of the Electroencephalogram (EEG) pattern in wakefulness and sleep in our series allows us to detect significant abnormalities of the background activity in 100% of patients. The involvement of white matter and of the inter-hemispheric connection structures typically observed in tubulinopathies is evidenced by the high percentage of asynchronisms in the organization of sleep activity recorded. In addition to asymmetries of the background activity, excess of slowing, low amplitude and Magnetic Resonance (MR) imaging confirm the presence of extensive brain malformations involving subcortical and midline structures. In conclusion, epilepsy in tubulinopathies when present has a favorable evolution over time suggesting a not particularly aggressive therapeutic approach.
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- 2019
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49. Comparative Immunofluorescence Analysis of Beta-III Tubulin (TUBB3) Expression in the Gastric Cancer Tissue and Morphologically Normal Tissue Adjacent to the Tumor
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T. A. Bogush, V. Yu. Kirsanov, A. A. Basharina, V. S. Kosorukov, E. M. Kapura-Brekhovskikh, E. A. Bogush, O. B. Abu-Khaidar, and N. O. Vikhlyantseva
- Subjects
TUBB3 ,Pathology ,medicine.medical_specialty ,medicine.diagnostic_test ,biology ,Chemistry ,Normal tissue ,Cancer ,General Chemistry ,medicine.disease ,Immunofluorescence ,Flow cytometry ,Postoperative management ,Tubulin ,medicine ,biology.protein ,Beta (finance) - Abstract
The immunofluorescence analysis of the tumor-associated protein TUBB3 in gastric cancer tissue and morphologically normal tissue adjacent to the tumor was carried out using flow cytometry (in total 48 samples). Expression of TUBB3 was detected in 100% of the tumors and in 79.2% of the normal tissue samples. The marker expression level in 36.8% of the normal tissue samples was approximately equal to that in the tumor; it was significantly (by a factor of 1.8) lower in 63.2% of the cases. Direct correlation was found between the level of TUBB3 expression in the tumor and normal tissue (p = 0.0061). It is concluded that the TUBB3 expression in morphologically normal tissue adjacent to the tumor can be a molecular marker of the local spread of gastric cancer and a guideline in selecting the optimal postoperative patient management.
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- 2021
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50. Two different prenatal imaging cerebral patterns of tubulinopathy
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Rabih Chaoui, Catherine Garel, J. Hartung, M. Delius, Gaetan Lesca, K. Karl, Laurent Guibaud, and Sara Cabet
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TUBB3 ,Interhemispheric fissure ,Radiological and Ultrasound Technology ,business.industry ,Obstetrics and Gynecology ,Prenatal imaging ,General Medicine ,Anatomy ,Microlissencephaly ,Dysgenesis ,Reproductive Medicine ,TUBB2B gene ,Medicine ,Radiology, Nuclear Medicine and imaging ,Brainstem ,business ,Kinked brainstem - Abstract
To illustrate the prenatal imaging cerebral features associated with tubulinopathies, we report the data of five affected individuals from unrelated families with de novo heterozygous variants in tubulin genes (TUBA1A, TUBB2B, or TUBB3). We identified two distinct prenatal imaging patterns related to tubulinopathies: a severe form, characterized by voluminous germinal matrices, microlissencephaly, and a kinked brainstem, and a mild prenatal form which has not previously been reported in the prenatal literature. This latter form is associated with non-specific features, including an asymmetric brainstem, distortion of the anterior part of the interhemispheric fissure with subsequent impacted medial borders of the frontal lobes, callosal dysgenesis, and a lack of Sylvian fissure operculation, the combination of which is highly suggestive of tubulinopathies, in the absence of additional extra-cerebral anomalies. This article is protected by copyright. All rights reserved.
- Published
- 2021
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