128,036 results on '"Taha, A."'
Search Results
2. SoK: Come Together -- Unifying Security, Information Theory, and Cognition for a Mixed Reality Deception Attack Ontology & Analysis Framework
- Author
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Teymourian, Ali, Webb, Andrew M., Gharaibeh, Taha, Ghildiyal, Arushi, and Baggili, Ibrahim
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Computer Science - Cryptography and Security ,Computer Science - Human-Computer Interaction - Abstract
We present a primary attack ontology and analysis framework for deception attacks in Mixed Reality (MR). This is achieved through multidisciplinary Systematization of Knowledge (SoK), integrating concepts from MR security, information theory, and cognition. While MR grows in popularity, it presents many cybersecurity challenges, particularly concerning deception attacks and their effects on humans. In this paper, we use the Borden-Kopp model of deception to develop a comprehensive ontology of MR deception attacks. Further, we derive two models to assess impact of MR deception attacks on information communication and decision-making. The first, an information-theoretic model, mathematically formalizes the effects of attacks on information communication. The second, a decision-making model, details the effects of attacks on interlaced cognitive processes. Using our ontology and models, we establish the MR Deception Analysis Framework (DAF) to assess the effects of MR deception attacks on information channels, perception, and attention. Our SoK uncovers five key findings for research and practice and identifies five research gaps to guide future work., Comment: Accepted to USENIX Security '25
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- 2025
3. A Note on Exact State Visit Probabilities in Two-State Markov Chains
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Shah, Mohammad Taha
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Mathematics - Probability - Abstract
In this note we derive the exact probability that a specific state in a two-state Markov chain is visited exactly $k$ times after $N$ transitions. We provide a closed-form solution for $\mathbb{P}(N_l = k \mid N)$, considering initial state probabilities and transition dynamics. The solution corrects and extends prior incomplete results, offering a rigorous framework for enumerating state transitions. Numerical simulations validate the derived expressions, demonstrating their applicability in stochastic modeling., Comment: Brief Communication of 8 pages and 2 figures
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- 2025
4. The Spine of a Supersingular $\ell$-Isogeny graph
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Hedayat, Taha, Arpin, Sarah, and Scheidler, Renate
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Mathematics - Number Theory - Abstract
Supersingular elliptic curve $\ell$-isogeny graphs over finite fields offer a setting for a number of quantum-resistant cryptographic protocols. The security analysis of these schemes typically assumes that these graphs behave randomly. Motivated by this debatable assertion, we explore structural properties of these graphs. We detail the behavior, governed by congruence conditions on $p$, of the $\ell$-isogeny graph over $\mathbb{F}_p$ when passing to the spine, i.e.\ the subgraph induced by the $\mathbb{F}_p$-vertices in the full $\ell$-isogeny graph. We describe the diameter of the spine and offer numerical data on the number of vertices, over both $\mathbb{F}_p$ and $\overline{\mathbb{F}}_p$, in the center of the $\ell$-isogeny graph. Our plots of these counts exhibit an intriguing wave-shaped pattern which warrants further investigation. Accompanying code: https://github.com/TahaHedayat/LUCANT-2025-Supersingular-Ell-Isogeny-Spine
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- 2025
5. Predictive Beamforming with Distributed MIMO
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Akçalı, Hasret Taha, Demir, Özlem Tuğfe, Girici, Tolga, and Björnson, Emil
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Electrical Engineering and Systems Science - Signal Processing ,Computer Science - Information Theory - Abstract
In vehicle-to-everything (V2X) applications, roadside units (RSUs) can be tasked with both sensing and communication functions to enable sensing-assisted communications. Recent studies have demonstrated that distance, angle, and velocity information obtained through sensing can be leveraged to reduce the overhead associated with communication beam tracking. In this work, we extend this concept to scenarios involving multiple distributed RSUs and distributed MIMO (multiple-input multiple-output) systems. We derive the state evolution model, formulate the extended Kalman-filter equations, and implement predictive beamforming for distributed MIMO. Simulation results indicate that, when compared with a co-located massive MIMO antenna array, distributed antennas lead to more uniform and robust sensing performance, coverage, and data rates, while the vehicular user is in motion., Comment: 8 pages, 6 figures, submitted as a conference paper
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- 2025
6. Robust Mobile Robot Path Planning via LLM-Based Dynamic Waypoint Generation
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Tariq, Muhammad Taha, Wang, Congqing, and Hussain, Yasir
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Computer Science - Robotics - Abstract
Mobile robot path planning in complex environments remains a significant challenge, especially in achieving efficient, safe and robust paths. The traditional path planning techniques like DRL models typically trained for a given configuration of the starting point and target positions, these models only perform well when these conditions are satisfied. In this paper, we proposed a novel path planning framework that embeds Large Language Models to empower mobile robots with the capability of dynamically interpreting natural language commands and autonomously generating efficient, collision-free navigation paths. The proposed framework uses LLMs to translate high-level user inputs into actionable waypoints while dynamically adjusting paths in response to obstacles. We experimentally evaluated our proposed LLM-based approach across three different environments of progressive complexity, showing the robustness of our approach with llama3.1 model that outperformed other LLM models in path planning time, waypoint generation success rate, and collision avoidance. This underlines the promising contribution of LLMs for enhancing the capability of mobile robots, especially when their operation involves complex decisions in large and complex environments. Our framework has provided safer, more reliable navigation systems and opened a new direction for the future research. The source code of this work is publicly available on GitHub., Comment: 18 pages, 6 figures, submitted in Journal Expert Systems with Applications
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- 2025
7. Automatic detection and prediction of nAMD activity change in retinal OCT using Siamese networks and Wasserstein Distance for ordinality
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Emre, Taha, Araújo, Teresa, Oghbaie, Marzieh, Lachinov, Dmitrii, Aresta, Guilherme, and Bogunović, Hrvoje
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Electrical Engineering and Systems Science - Image and Video Processing ,Computer Science - Computer Vision and Pattern Recognition ,Computer Science - Machine Learning - Abstract
Neovascular age-related macular degeneration (nAMD) is a leading cause of vision loss among older adults, where disease activity detection and progression prediction are critical for nAMD management in terms of timely drug administration and improving patient outcomes. Recent advancements in deep learning offer a promising solution for predicting changes in AMD from optical coherence tomography (OCT) retinal volumes. In this work, we proposed deep learning models for the two tasks of the public MARIO Challenge at MICCAI 2024, designed to detect and forecast changes in nAMD severity with longitudinal retinal OCT. For the first task, we employ a Vision Transformer (ViT) based Siamese Network to detect changes in AMD severity by comparing scan embeddings of a patient from different time points. To train a model to forecast the change after 3 months, we exploit, for the first time, an Earth Mover (Wasserstein) Distance-based loss to harness the ordinal relation within the severity change classes. Both models ranked high on the preliminary leaderboard, demonstrating that their predictive capabilities could facilitate nAMD treatment management., Comment: Solution to the MICCAI 2024 MARIO Challange. First 3 authors contributed equally. Models can be found at https://github.com/EmreTaha/Siamese-EMD-for-AMD-Change
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- 2025
8. On the Almost Sure Convergence of the Stochastic Three Points Algorithm
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Kadi, Taha El Bakkali El and Saadi, Omar
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Mathematics - Optimization and Control - Abstract
The stochastic three points (STP) algorithm is a derivative-free optimization technique designed for unconstrained optimization problems in $\mathbb{R}^d$. In this paper, we analyze this algorithm for three classes of functions: smooth functions that may lack convexity, smooth convex functions, and smooth functions that are strongly convex. Our work provides the first almost sure convergence results of the STP algorithm, alongside some convergence results in expectation. For the class of smooth functions, we establish that the best gradient iterate of the STP algorithm converges almost surely to zero at a rate arbitrarily close to $o(\frac{1}{\sqrt{T}})$, where $T$ is the number of iterations. Furthermore, within the same class of functions, we establish both almost sure convergence and convergence in expectation of the final gradient iterate towards zero. For the class of smooth convex functions, we establish that $f(\theta^T)$ converges to $\inf_{\theta \in \mathbb{R}^d} f(\theta)$ almost surely at a rate arbitrarily close to $o(\frac{1}{T})$, and in expectation at a rate of $O(\frac{d}{T})$ where $d$ is the dimension of the space. Finally, for the class of smooth functions that are strongly convex, we establish that when step sizes are obtained by approximating the directional derivatives of the function, $f(\theta^T)$ converges to $\inf_{\theta \in \mathbb{R}^d} f(\theta)$ in expectation at a rate of $O((1-\frac{\mu}{dL})^T)$, and almost surely at a rate arbitrarily close to $o((1-\frac{\mu}{dL})^T)$, where $\mu$ and $L$ are the strong convexity and smoothness parameters of the function.
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- 2025
9. HEPPO: Hardware-Efficient Proximal Policy Optimization -- A Universal Pipelined Architecture for Generalized Advantage Estimation
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Taha, Hazem and Abdelhadi, Ameer M. S.
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Computer Science - Hardware Architecture ,Computer Science - Artificial Intelligence ,Computer Science - Machine Learning ,B.2 ,B.3 ,B.5 ,B.6 ,B.7 ,C.1 ,C.3 ,I.2 - Abstract
This paper introduces HEPPO, an FPGA-based accelerator designed to optimize the Generalized Advantage Estimation (GAE) stage in Proximal Policy Optimization (PPO). Unlike previous approaches that focused on trajectory collection and actor-critic updates, HEPPO addresses GAE's computational demands with a parallel, pipelined architecture implemented on a single System-on-Chip (SoC). This design allows for the adaptation of various hardware accelerators tailored for different PPO phases. A key innovation is our strategic standardization technique, which combines dynamic reward standardization and block standardization for values, followed by 8-bit uniform quantization. This method stabilizes learning, enhances performance, and manages memory bottlenecks, achieving a 4x reduction in memory usage and a 1.5x increase in cumulative rewards. We propose a solution on a single SoC device with programmable logic and embedded processors, delivering throughput orders of magnitude higher than traditional CPU-GPU systems. Our single-chip solution minimizes communication latency and throughput bottlenecks, significantly boosting PPO training efficiency. Experimental results show a 30% increase in PPO speed and a substantial reduction in memory access time, underscoring HEPPO's potential for broad applicability in hardware-efficient reinforcement learning algorithms., Comment: Accepted at the 2024 International Conference on Field Programmable Technology (ICFPT 2023)
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- 2025
10. DenoMAE: A Multimodal Autoencoder for Denoising Modulation Signals
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Faysal, Atik, Boushine, Taha, Rostami, Mohammad, Roshan, Reihaneh Gh., Wang, Huaxia, Muralidhar, Nikhil, Sahoo, Avimanyu, and Yao, Yu-Dong
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Computer Science - Machine Learning - Abstract
We propose Denoising Masked Autoencoder (Deno-MAE), a novel multimodal autoencoder framework for denoising modulation signals during pretraining. DenoMAE extends the concept of masked autoencoders by incorporating multiple input modalities, including noise as an explicit modality, to enhance cross-modal learning and improve denoising performance. The network is pre-trained using unlabeled noisy modulation signals and constellation diagrams, effectively learning to reconstruct their equivalent noiseless signals and diagrams. Deno-MAE achieves state-of-the-art accuracy in automatic modulation classification tasks with significantly fewer training samples, demonstrating a 10% reduction in unlabeled pretraining data and a 3% reduction in labeled fine-tuning data compared to existing approaches. Moreover, our model exhibits robust performance across varying signal-to-noise ratios (SNRs) and supports extrapolation on unseen lower SNRs. The results indicate that DenoMAE is an efficient, flexible, and data-efficient solution for denoising and classifying modulation signals in challenging noise-intensive environments.
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- 2025
11. Fanar: An Arabic-Centric Multimodal Generative AI Platform
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Fanar Team, Abbas, Ummar, Ahmad, Mohammad Shahmeer, Alam, Firoj, Altinisik, Enes, Asgari, Ehsannedin, Boshmaf, Yazan, Boughorbel, Sabri, Chawla, Sanjay, Chowdhury, Shammur, Dalvi, Fahim, Darwish, Kareem, Durrani, Nadir, Elfeky, Mohamed, Elmagarmid, Ahmed, Eltabakh, Mohamed, Fatehkia, Masoomali, Fragkopoulos, Anastasios, Hasanain, Maram, Hawasly, Majd, Husaini, Mus'ab, Jung, Soon-Gyo, Lucas, Ji Kim, Magdy, Walid, Messaoud, Safa, Mohamed, Abubakr, Mohiuddin, Tasnim, Mousi, Basel, Mubarak, Hamdy, Musleh, Ahmad, Naeem, Zan, Ouzzani, Mourad, Popovic, Dorde, Sadeghi, Amin, Sencar, Husrev Taha, Shinoy, Mohammed, Sinan, Omar, Zhang, Yifan, Ali, Ahmed, Kheir, Yassine El, Ma, Xiaosong, and Ruan, Chaoyi
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Computer Science - Computation and Language ,Computer Science - Artificial Intelligence ,I.2.0 ,D.2.0 - Abstract
We present Fanar, a platform for Arabic-centric multimodal generative AI systems, that supports language, speech and image generation tasks. At the heart of Fanar are Fanar Star and Fanar Prime, two highly capable Arabic Large Language Models (LLMs) that are best in the class on well established benchmarks for similar sized models. Fanar Star is a 7B (billion) parameter model that was trained from scratch on nearly 1 trillion clean and deduplicated Arabic, English and Code tokens. Fanar Prime is a 9B parameter model continually trained on the Gemma-2 9B base model on the same 1 trillion token set. Both models are concurrently deployed and designed to address different types of prompts transparently routed through a custom-built orchestrator. The Fanar platform provides many other capabilities including a customized Islamic Retrieval Augmented Generation (RAG) system for handling religious prompts, a Recency RAG for summarizing information about current or recent events that have occurred after the pre-training data cut-off date. The platform provides additional cognitive capabilities including in-house bilingual speech recognition that supports multiple Arabic dialects, voice and image generation that is fine-tuned to better reflect regional characteristics. Finally, Fanar provides an attribution service that can be used to verify the authenticity of fact based generated content. The design, development, and implementation of Fanar was entirely undertaken at Hamad Bin Khalifa University's Qatar Computing Research Institute (QCRI) and was sponsored by Qatar's Ministry of Communications and Information Technology to enable sovereign AI technology development.
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- 2025
12. Logarithmic Memory Networks (LMNs): Efficient Long-Range Sequence Modeling for Resource-Constrained Environments
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Taha, Mohamed A.
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Computer Science - Artificial Intelligence ,Computer Science - Machine Learning - Abstract
Long-range sequence modeling is a crucial aspect of natural language processing and time series analysis. However, traditional models like Recurrent Neural Networks (RNNs) and Transformers suffer from computational and memory inefficiencies, especially when dealing with long sequences. This paper introduces Logarithmic Memory Networks (LMNs), a novel architecture that leverages a hierarchical logarithmic tree structure to efficiently store and retrieve past information. LMNs dynamically summarize historical context, significantly reducing the memory footprint and computational complexity of attention mechanisms from O(n2) to O(log(n)). The model employs a single-vector, targeted attention mechanism to access stored information, and the memory block construction worker (summarizer) layer operates in two modes: a parallel execution mode during training for efficient processing of hierarchical tree structures and a sequential execution mode during inference, which acts as a memory management system. It also implicitly encodes positional information, eliminating the need for explicit positional encodings. These features make LMNs a robust and scalable solution for processing long-range sequences in resource-constrained environments, offering practical improvements in efficiency and scalability. The code is publicly available under the MIT License on GitHub: https://github.com/AhmedBoin/LogarithmicMemory., Comment: 18 pages, 10 figures
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- 2025
13. Casting Computational Fluid Mechanics into a Convex Quadratic Optimization Framework
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Sababha, Hussam, Taha, Haithem, and Daqaq, Mohammed
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Physics - Fluid Dynamics - Abstract
We employ the principle of minimum pressure gradient to transform problems in unsteady computational fluid dynamics (CFD) into a convex optimization framework subject to linear constraints. This formulation permits solving, for the first time, CFD problems efficiently using well-established quadratic programming tools or using the well-known Karush-Kuhn-Tucker (KKT) condition. The proposed approach is demonstrated using three benchmark examples. In particular, it is shown through comparison with traditional CFD tools that the proposed framework is capable of predicting the flow field in a lid-driven cavity, in a uniform pipe (Poiseuille flow), and that past a backward facing step. The results highlight the potential of the method as a simple, robust, and potentially transformative alternative to traditional CFD approaches.
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- 2025
14. On the Separating Flow Behind a Cylinder: Insights from the Principle of Minimum Pressure Gradient
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Shorbagy, Mohamed and Taha, Haithem
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Physics - Fluid Dynamics - Abstract
We study the separating flow over a circular cylinder with two objectives: (i) to demonstrate the validity of the condition of matching curvature, and (ii) to obtain a reasonable estimate of the separation angle in the subcritical regime (Re=10^4-10^5) without explicitly modeling the boundary layer. First, we study Roshko's free streamline model (1954); it is an ideal flow model with sheets of discontinuities that represent the separating shear layers in the near wake region. The model fails to predict the correct separation angle over a cylinder. Roshko attributed this discrepancy to the condition of matching curvature, which asserts that the curvature of the separating streamline at the separation point must match that of the cylinder. We show that such a condition is legitimate and is not the real culprit for the failure of Roshko's model in predicting separation. Second, we employ the principle of minimum pressure gradient (PMPG), which asserts that, an incompressible flow evolves by minimizing the total magnitude of the pressure gradient over the domain. Encouraged by the fact that the flow characteristics in the range Re=10^4-10^5 are fairly independent of Re, we aim to predict the separation angle in this regime without modeling the boundary layer -- a task that may seem impossible, though anticipated by Prandtl in his seminal paper (Prandtl 1904). Over the family of kinematically-admissible, equilibrium flows, we utilize the PMPG to single out the separating flow with the minimum pressure gradient cost. Interestingly, the obtained separation angles match experimental measurements over the regime Re=10^4-10^5.
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- 2025
15. Deep Linear Hawkes Processes
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Chang, Yuxin, Boyd, Alex, Xiao, Cao, Kass-Hout, Taha, Bhatia, Parminder, Smyth, Padhraic, and Warrington, Andrew
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Statistics - Machine Learning ,Computer Science - Machine Learning - Abstract
Marked temporal point processes (MTPPs) are used to model sequences of different types of events with irregular arrival times, with broad applications ranging from healthcare and social networks to finance. We address shortcomings in existing point process models by drawing connections between modern deep state-space models (SSMs) and linear Hawkes processes (LHPs), culminating in an MTPP that we call the deep linear Hawkes process (DLHP). The DLHP modifies the linear differential equations in deep SSMs to be stochastic jump differential equations, akin to LHPs. After discretizing, the resulting recurrence can be implemented efficiently using a parallel scan. This brings parallelism and linear scaling to MTPP models. This contrasts with attention-based MTPPs, which scale quadratically, and RNN-based MTPPs, which do not parallelize across the sequence length. We show empirically that DLHPs match or outperform existing models across a broad range of metrics on eight real-world datasets. Our proposed DLHP model is the first instance of the unique architectural capabilities of SSMs being leveraged to construct a new class of MTPP models.
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- 2024
16. The Cozero part of the pointfree version of $C_c (X)$
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Estaji, Ali Akbar and Taha, Maryam
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Mathematics - General Topology ,Mathematics - Rings and Algebras ,Primary: 06D22, Secondary: 54C05, 54C30, 17C27 - Abstract
Let $\mathcal C_{c}(L):= \{\alpha\in \mathcal{R}(L) \mid R_{\alpha} \, \text{ is a countable subset of } \, \mathbb R \}$, where $R_\alpha:=\{r\in\mathbb R \mid {\mathrm{coz}}(\alpha-r)\neq\top\}$ for every $\alpha\in\mathcal R (L).$ By using idempotent elements, it is going to prove that ${{\mathrm{Coz}}}_c[L]:= \{{\mathrm{coz}}(\alpha) \mid \alpha\in\mathcal{C}_c (L) \}$ is a $\sigma$-frame for every completely regular frame $L,$ and from this, we conclude that it is regular, paracompact, perfectly normal and an Alexandroff algebra frame such that each cover of it is shrinkable. Also, we show that $L$ is a zero-dimensional frame if and only if $ L$ is a $c$-completely regular frame.
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- 2024
17. Comprehensive Study on Lumbar Disc Segmentation Techniques Using MRI Data
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Salturk, Serkan, Sayin, Irem, Balci, Ibrahim Cem, Pamukcu, Taha Emre, Soydan, Zafer, and Uvet, Huseyin
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Electrical Engineering and Systems Science - Image and Video Processing ,Computer Science - Artificial Intelligence ,Computer Science - Computer Vision and Pattern Recognition - Abstract
Lumbar disk segmentation is essential for diagnosing and curing spinal disorders by enabling precise detection of disk boundaries in medical imaging. The advent of deep learning has resulted in the development of many segmentation methods, offering differing levels of accuracy and effectiveness. This study assesses the effectiveness of several sophisticated deep learning architectures, including ResUnext, Ef3 Net, UNet, and TransUNet, for lumbar disk segmentation, highlighting key metrics like as Pixel Accuracy, Mean Intersection over Union (Mean IoU), and Dice Coefficient. The findings indicate that ResUnext achieved the highest segmentation accuracy, with a Pixel Accuracy of 0.9492 and a Dice Coefficient of 0.8425, with TransUNet following closely after. Filtering techniques somewhat enhanced the performance of most models, particularly Dense UNet, improving stability and segmentation quality. The findings underscore the efficacy of these models in lumbar disk segmentation and highlight potential areas for improvement., Comment: 8 pages, 2 figures
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- 2024
18. Computational Sociology of Humans and Machines; Conflict and Collaboration
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Yasseri, Taha
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Computer Science - Computers and Society ,Computer Science - Human-Computer Interaction ,Computer Science - Social and Information Networks ,Physics - Physics and Society - Abstract
This Chapter examines the dynamics of conflict and collaboration in human-machine systems, with a particular focus on large-scale, internet-based collaborative platforms. While these platforms represent successful examples of collective knowledge production, they are also sites of significant conflict, as diverse participants with differing intentions and perspectives interact. The analysis identifies recurring patterns of interaction, including serial attacks, reciprocal revenge, and third-party interventions. These microstructures reveal the role of experience, cultural differences, and topic sensitivity in shaping human-human, human-machine, and machine-machine interactions. The chapter further investigates the role of algorithmic agents and bots, highlighting their dual nature: they enhance collaboration by automating tasks but can also contribute to persistent conflicts with both humans and other machines. We conclude with policy recommendations that emphasize transparency, balance, cultural sensitivity, and governance to maximize the benefits of human-machine synergy while minimizing potential detriments., Comment: Please cite as: Yasseri, T. (2025). Computational Sociology of Humans and Machines; Conflict and Collaboration. In: T. Yasseri (Ed.), Handbook of Computational Social Science. Edward Elgar Publishing Ltd
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- 2024
19. Probabilistic Shaping for Nonlinearity Tolerance
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Askari, Mohammad Taha and Lampe, Lutz
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Electrical Engineering and Systems Science - Signal Processing ,Computer Science - Information Theory - Abstract
Optimizing the input probability distribution of a discrete-time channel is a standard step in the information-theoretic analysis of digital communication systems. Nevertheless, many practical communication systems transmit uniformly and independently distributed symbols drawn from regular constellation sets. The introduction of the probabilistic amplitude shaping architecture has renewed interest in using optimized probability distributions, i.e., probabilistic shaping. Traditionally, probabilistic shaping has been employed to reduce the transmit power required for a given information rate over additive noise channels. While this translates into substantive performance gains for optical fiber communication systems, the interaction of shaping and fiber nonlinearity has posed intriguing questions. At first glance, probabilistic shaping seems to exacerbate nonlinear interference noise (NLIN) due to larger higher-order standardized moments. Therefore, the optimization of shaping distributions must differ from those used for linear channels. Secondly, finite-length effects related to the memory of the nonlinear fiber channel have been observed. This suggests that the marginal input-symbol distribution is not the only consideration. This paper provides a tutorial-style discussion of probabilistic shaping for optical fiber communication. Since the distinguishing property of the channel is the signal-dependent NLIN, we speak of probabilistic shaping for nonlinearity tolerance. Our analysis builds on the first-order time-domain perturbation approximation of the nonlinear fiber channel and revisits the notion of linear and nonlinear shaping gain. We largely focus on probabilistic amplitude shaping with popular shaping methods. The concept of shaping via sequence selection is given special consideration, as it inherently optimizes a multivariate distribution for shaped constellations., Comment: 17 pages, 23 figures, Submitted to IEEE Journal of Lightwave Technology on July 20, 2024
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- 2024
20. Toxic behavior silences online political conversations
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Juncosa, Gabriela, Yasseri, Taha, Koltai, Julia, and Iniguez, Gerardo
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Computer Science - Social and Information Networks ,Computer Science - Computers and Society - Abstract
Quantifying how individuals react to social influence is crucial for tackling collective political behavior online. While many studies of opinion in public forums focus on social feedback, they often overlook the potential for human interactions to result in self-censorship. Here, we investigate political deliberation in online spaces by exploring the hypothesis that individuals may refrain from expressing minority opinions publicly due to being exposed to toxic behavior. Analyzing conversations under YouTube videos from six prominent US news outlets around the 2020 US presidential elections, we observe patterns of self-censorship signaling the influence of peer toxicity on users' behavior. Using hidden Markov models, we identify a latent state consistent with toxicity-driven silence. Such state is characterized by reduced user activity and a higher likelihood of posting toxic content, indicating an environment where extreme and antisocial behaviors thrive. Our findings offer insights into the intricacies of online political deliberation and emphasize the importance of considering self-censorship dynamics to properly characterize ideological polarization in digital spheres.
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- 2024
21. Multimodal Biometric Authentication Using Camera-Based PPG and Fingerprint Fusion
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Zheng, Xue Xian, Rahma, M. M. Ur, Taha, Bilal, Masood, Mudassir, Hatzinakos, Dimitrios, and Al-Naffouri, Tareq
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Computer Science - Computer Vision and Pattern Recognition - Abstract
Camera-based photoplethysmography (PPG) obtained from smartphones has shown great promise for personalized healthcare and secure authentication. This paper presents a multimodal biometric system that integrates PPG signals extracted from videos with fingerprint data to enhance the accuracy of user verification. The system requires users to place their fingertip on the camera lens for a few seconds, allowing the capture and processing of unique biometric characteristics. Our approach employs a neural network with two structured state-space model (SSM) encoders to manage the distinct modalities. Fingerprint images are transformed into pixel sequences, and along with segmented PPG waveforms, they are input into the encoders. A cross-modal attention mechanism then extracts refined feature representations, and a distribution-oriented contrastive loss function aligns these features within a unified latent space. Experimental results demonstrate the system's superior performance across various evaluation metrics in both single-session and dual-session authentication scenarios.
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- 2024
22. A Variational Computational-based Framework for Unsteady Incompressible Flows
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Sababha, H., Elmaradny, A., Taha, H., and Daqaq, M.
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Physics - Fluid Dynamics ,Computer Science - Machine Learning ,Mathematics - Optimization and Control - Abstract
Advancements in computational fluid mechanics have largely relied on Newtonian frameworks, particularly through the direct simulation of Navier-Stokes equations. In this work, we propose an alternative computational framework that employs variational methods, specifically by leveraging the principle of minimum pressure gradient, which turns the fluid mechanics problem into a minimization problem whose solution can be used to predict the flow field in unsteady incompressible viscous flows. This method exhibits two particulary intriguing properties. First, it circumvents the chronic issues of pressure-velocity coupling in incompressible flows, which often dominates the computational cost in computational fluid dynamics (CFD). Second, this method eliminates the reliance on unphysical assumptions at the outflow boundary, addressing another longstanding challenge in CFD. We apply this framework to three benchmark examples across a range of Reynolds numbers: (i) unsteady flow field in a lid-driven cavity, (ii) Poiseuille flow, and (iii) flow past a circular cylinder. The minimization framework is carried out using a physics-informed neural network (PINN), which integrates the underlying physical principles directly into the training of the model. The results from the proposed method are validated against high-fidelity CFD simulations, showing an excellent agreement. Comparison of the proposed variational method to the conventional method, wherein PINNs is directly applied to solve Navier-Stokes Equations, reveals that the proposed method outperforms conventional PINNs in terms of both convergence rate and time, demonstrating its potential for solving complex fluid mechanics problems.
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- 2024
23. AI's assigned gender affects human-AI cooperation
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Bazazi, Sepideh, Karpus, Jurgis, and Yasseri, Taha
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Computer Science - Computers and Society ,Computer Science - Artificial Intelligence ,Computer Science - Computer Science and Game Theory ,Computer Science - Human-Computer Interaction - Abstract
Cooperation between humans and machines is increasingly vital as artificial intelligence (AI) becomes more integrated into daily life. Research indicates that people are often less willing to cooperate with AI agents than with humans, more readily exploiting AI for personal gain. While prior studies have shown that giving AI agents human-like features influences people's cooperation with them, the impact of AI's assigned gender remains underexplored. This study investigates how human cooperation varies based on gender labels assigned to AI agents with which they interact. In the Prisoner's Dilemma game, 402 participants interacted with partners labelled as AI (bot) or humans. The partners were also labelled male, female, non-binary, or gender-neutral. Results revealed that participants tended to exploit female-labelled and distrust male-labelled AI agents more than their human counterparts, reflecting gender biases similar to those in human-human interactions. These findings highlight the significance of gender biases in human-AI interactions that must be considered in future policy, design of interactive AI systems, and regulation of their use., Comment: Manuscript under review
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- 2024
24. Ground State Energy Estimation on Current Quantum Hardware Through The Variational Quantum Eigensolver: A Comprehensive Study
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Belaloui, Nacer Eddine, Tounsi, Abdellah, Khamadja, Rabah Abdelmouheymen, Louamri, Mohamed Messaoud, Benslama, Achour, Neira, David E. Bernal, and Rouabah, Mohamed Taha
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Quantum Physics - Abstract
While numerical simulations are presented in most papers introducing new methods to enhance the VQE performance, comprehensive, comparative, and applied studies remain relatively rare. We present a comprehensive, yet concise guide for the implementation of the VQE for molecular problems on NISQ devices, specifically applied to estimate the ground state energy of the BeH2 molecule using hardware-efficient and chemically informed ans\"atze. This work clarifies several under-documented aspects in the literature, such as the construction of the electronic Hamiltonian, the transformation of fermionic operators into qubit operators via second quantization, and the mathematical framework's details for the unitary coupled cluster single and double (UCCSD) ansatz. Our methodology, implemented using Qiskit 1.2, the latest release as of the date of this writing, is demonstrated on a noiseless simulator and further tested with noisy quantum circuits. The resilience of the VQE to quantum noise remains an open question. This study compares the computational accuracy of ground state energy estimations for molecules using the VQE across three different current quantum hardware noise models. Furthermore, our experiment on IBM's 156-qubit actual quantum computer revealed valuable insights on the real performance of the VQE on current quantum hardware.
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- 2024
25. Removing Spurious Correlation from Neural Network Interpretations
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Fotouhi, Milad, Bahadori, Mohammad Taha, Feyisetan, Oluwaseyi, Arabshahi, Payman, and Heckerman, David
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Computer Science - Computation and Language ,Computer Science - Artificial Intelligence ,Computer Science - Machine Learning ,Statistics - Applications ,Statistics - Methodology - Abstract
The existing algorithms for identification of neurons responsible for undesired and harmful behaviors do not consider the effects of confounders such as topic of the conversation. In this work, we show that confounders can create spurious correlations and propose a new causal mediation approach that controls the impact of the topic. In experiments with two large language models, we study the localization hypothesis and show that adjusting for the effect of conversation topic, toxicity becomes less localized.
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- 2024
26. Lipid mediators in post-mortem brain samples from patients with Alzheimer's disease: A systematic review
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Tyrrell, Aidan D, Cisbani, Giulia, Smith, Mackenzie E, Chen, Chuck T, Chen, Yue-Tong, Chouinard-Watkins, Raphael, Hopperton, Kathryn E, Taha, Ameer Y, and Bazinet, Richard P
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Biomedical and Clinical Sciences ,Clinical Sciences ,Immunology ,Neurosciences ,Neurodegenerative ,Alzheimer's Disease ,Acquired Cognitive Impairment ,Brain Disorders ,Alzheimer's Disease including Alzheimer's Disease Related Dementias (AD/ADRD) ,Dementia ,Aging ,2.1 Biological and endogenous factors ,Neurological ,Clinical sciences - Abstract
A proposed contributor to Alzheimer's disease (AD) pathology is the induction of neuroinflammation due to tau and beta-amyloid protein accumulation causing neuronal injury and dysfunction. Dysregulation of lipid mediators derived from polyunsaturated fatty acids may contribute to this inflammatory response in the brain of patients with AD, yet the literature has not yet been systematically reviewed. A systematic search was conducted in Medline, Embase and PsychINFO for articles published up to April 22, 2024. Papers were included if they measured levels of lipid mediators and/or enzymes involved in their production in post-mortem brain samples from patients with AD and control without neurological disease. A total of 50 relevant studies were identified. Despite heterogeneity in the results, pro-inflammatory lipid mediators, including 5-, 11-, 12- and 15-hydroxyeicosatetraenoic acid oxylipins and prostaglandin D2, were significantly higher, while anti-inflammatory lipoxin A4 and DHA-derived docosanoids were significantly lower in brains of patients with AD compared to control (16 studies). Thirty-seven articles reported on enzymes, with 32 reporting values for enzyme level changes between AD and controls. Among the 32 articles, the majority reported on levels of cyclooxygenase (COX) (18/32), with fewer studies reporting on phospholipase (8/32), lipoxygenase (LOX) (4/32) and prostaglandin E synthase (4/32). Enzyme levels also exhibited variability in the literature, with a trend towards elevated expression of enzymes involved in the pro-inflammatory response, including COX and LOX enzymes. Overall, these results are consistent with the involvement of neuroinflammation in the pathogenesis of AD measured by lipid mediators. However, the specific contribution of each lipid metabolite and enzymes to either the progression or persistence of AD remains unclear, and more research is required.
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- 2025
27. Magnetic order in nanogranular iron germanium (Fe0.53Ge0.47) films
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Zielinski, Ruthi, Nguyen, Nhat, Herrington, Bryce, Tarkian, Amir, Taha, Omar, Chin, Wai Kiat, Mahmood, Ather, Chen, Xiaoqian, Klewe, Christoph, Shafer, Padraic, Ciston, Jim, Ashby, Paul, Mazzoli, Claudio, and Streubel, Robert
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Physical Sciences ,Condensed Matter Physics ,amorphous film ,topological magnetism ,magnetic moment ,strain ,magnetic imaging ,x-ray photon correlation spectroscopy ,Materials Engineering ,Nanotechnology ,Fluids & Plasmas ,Materials engineering ,Condensed matter physics - Abstract
We study the effect of strain on the magnetic properties and magnetization configurations in nanogranular FexGe1-xfilms (x=0.53±0.05) with and without B20 FeGe nanocrystals surrounded by an amorphous structure. Relaxed films on amorphous silicon nitride membranes reveal a disordered skyrmion phase while films near and on top of a rigid substrate favor ferromagnetism and an anisotropic hybridization of Fedlevels and spin-polarized Gespband states. The weakly coupled topological states emerge at room temperature and become more abundant at cryogenic temperatures without showing indications of pinning at defects or confinement to individual grains. These results demonstrate the possibility to control magnetic exchange and topological magnetism by strain and inform magnetoelasticity-mediated voltage control of topological phases in amorphous quantum materials.
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- 2025
28. Trends and disparities in cardiovascular disease-related mortality among adults with myeloproliferative neoplasms in USA.
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Agarwal, Siddharth, Qamar, Usama, Khan, Muhammad, Al-Juhaishi, Taha, Naqash, Abdul, Guha, Avirup, Yang, Eric, Barac, Ana, and Ul Abideen Asad, Zain
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Cardiovascular disease ,Disparities ,Ischaemic heart disease ,Mortality ,Myeloproliferative neoplasms ,Outcome - Abstract
AIMS: We aimed to perform a retrospective cohort study using the Centers for Disease Control and Preventions (CDCs) Wide-Ranging Online Data for Epidemiologic Research (WONDER) database to analyse the trends in cardiovascular disease (CVD)-related mortality in patients with myeloproliferative neoplasms (MPNs) from 1999 to 2020. METHODS AND RESULTS: We analysed the death certificate data from the CDC WONDER database from 1999 to 2020 for CVD with co-morbid myeloproliferative disorders in the US population. Age-adjusted mortality rates (AAMRs) and 95% confidence intervals (CIs) were computed per 1 million population by standardizing crude mortality rates to the 2000 US census population. To assess annual national mortality trends, we employed the Joinpoint regression model, calculating the annual per cent change in AAMR and corresponding 95% CIs. A total of 15 269 deaths related to CVD occurred in patients with co-morbid MPNs from 1999 to 2020. Overall, there was a decreasing trend in CVD-related AAMRs throughout these years. Males contributed to 51% of total deaths, and their AAMR was persistently higher than women throughout the study. Non-Hispanic (NH) Whites had the highest overall AAMR, followed by NH Blacks, NH American Indians or Alaska Natives, Hispanics or Latinos, and NH Asian or Pacific Islanders. CONCLUSION: Our findings indicate a significant decline with notable gender, racial/ethnic, and regional differences in CVD-related mortality among patients with MPN over the past two decades. We emphasize the importance of a collaborative approach between oncologists and cardiologists in managing these patients, highlighting the potential benefits of integrating cardio-oncology services to enhance patient outcomes.
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- 2025
29. Association of Hyperautofluorescence Signals with Geographic Atrophy Progression in the METformin for the MINimization of Geographic Atrophy Progression Trial
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Taha, Abu Tahir, Shen, Liangbo Linus, Diaz, Antonio, Chahal, Noor, Saroya, Jasmeet, Sun, Mengyuan, Allingham, Michael J, Farsiu, Sina, Yiu, Glenn, Keenan, Jeremy D, and Stewart, Jay M
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Biomedical and Clinical Sciences ,Ophthalmology and Optometry ,Clinical Research ,AMD ,Geographic atrophy ,RAFH - Abstract
PurposeTo investigate the association between rim area focal hyperautofluorescence (RAFH) signals and geographic atrophy (GA) growth rates, as well as the impact of oral metformin on the longitudinal change of RAFH.DesignSecondary analysis of a randomized controlled trial.ParticipantsSeventy-one eyes from 44 participants with GA and ≥6 months of follow-up in the METformin for the MINimization of geographic atrophy progression study.MethodsFundus autofluorescence images were captured using a 488 nm excitation wavelength. Two masked graders identified and measured RAFH lesions using proprietary semiautomatic segmentation software and ImageJ. We calculated RAFH by dividing the areas of hyperautofluorescence within a 450-μm rim circumscribing the GA by the total area enclosed within this rim.Main outcome measuresLongitudinal changes in RAFH and GA area.ResultsBaseline RAFH was positively associated with the baseline square root of GA area 0.065/year (P < 0.001). In the entire study cohort, higher baseline RAFH was associated with a faster GA area growth rate in mm2/year (Spearman's ρ = 0.53; P < 0.001). The association became weaker in square root-transformed GA area growth (ρ = 0.19, P = 0.11) and perimeter-adjusted GA growth rate (ρ = 0.28, P = 0.02), achieving statistical significance only in the latter. When this analysis was stratified into 3 baseline GA tertiles, the first and second tertiles showed weak to moderate association with statistical significance in all 3 modes of GA growth rates. Rim area focal hyperautofluorescence increased slightly but significantly over time at 0.020/year (P < 0.01). Rim area focal hyperautofluorescence increased slightly but significantly over time at 0.020/year (P < 0.01). The use of oral metformin was not significantly associated with the change in RAFH over time compared with the observation group (0.023/year vs. 0.016/year; P = 0.29).ConclusionsIncreased baseline RAFH is associated with faster GA area progression. However, the effect size of this association may depend on the baseline GA lesion size such that small to medium-sized GA lesions display this relationship regardless of the mode of the calculation of GA growth rate.Financial disclosuresProprietary or commercial disclosure may be found in the Footnotes and Disclosures at the end of this article.
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- 2025
30. Dietary resistant starch supplementation increases gut luminal deoxycholic acid abundance in mice
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Reuter, Melanie A, Tucker, Madelynn, Marfori, Zara, Shishani, Rahaf, Bustamante, Jessica Miranda, Moreno, Rosalinda, Goodson, Michael L, Ehrlich, Allison, Taha, Ameer Y, Lein, Pamela J, Joshi, Nikhil, Brito, Ilana, Durbin-Johnson, Blythe, Nandakumar, Renu, and Cummings, Bethany P
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Microbiology ,Biological Sciences ,Complementary and Integrative Health ,Nutrition ,Dietary Supplements ,Digestive Diseases ,Microbiome ,Liver Disease ,1.1 Normal biological development and functioning ,Oral and gastrointestinal ,Infection ,Mice ,Male ,Female ,Animals ,Resistant Starch ,Gastrointestinal Microbiome ,Bile Acids and Salts ,Bacteria ,Deoxycholic Acid ,Resistant starch ,7-alpha-dehydroxylation ,bile acid ,gut microbiome ,DCA ,metagenomics ,7-α-dehydroxylation - Abstract
Bile acids (BA) are among the most abundant metabolites produced by the gut microbiome. Primary BAs produced in the liver are converted by gut bacterial 7-α-dehydroxylation into secondary BAs, which can differentially regulate host health via signaling based on their varying affinity for BA receptors. Despite the importance of secondary BAs in host health, the regulation of 7-α-dehydroxylation and the role of diet in modulating this process is incompletely defined. Understanding this process could lead to dietary guidelines that beneficially shift BA metabolism. Dietary fiber regulates gut microbial composition and metabolite production. We tested the hypothesis that feeding mice a diet rich in a fermentable dietary fiber, resistant starch (RS), would alter gut bacterial BA metabolism. Male and female wild-type mice were fed a diet supplemented with RS or an isocaloric control diet (IC). Metabolic parameters were similar between groups. RS supplementation increased gut luminal deoxycholic acid (DCA) abundance. However, gut luminal cholic acid (CA) abundance, the substrate for 7-α-dehydroxylation in DCA production, was unaltered by RS. Further, RS supplementation did not change the mRNA expression of hepatic BA producing enzymes or ileal BA transporters. Metagenomic assessment of gut bacterial composition revealed no change in the relative abundance of bacteria known to perform 7-α-dehydroxylation. P. ginsenosidimutans and P. multiformis were positively correlated with gut luminal DCA abundance and increased in response to RS supplementation. These data demonstrate that RS supplementation enriches gut luminal DCA abundance without increasing the relative abundance of bacteria known to perform 7-α-dehydroxylation.
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- 2024
31. Retisert implantation without incisional sclerotomy in patients with uveitis and extensive pars plana fibrosis.
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Taha, Abu, Wu, Joshua, Schallhorn, Julie, and Stewart, Jay
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Fibrosis ,Retisert ,Uveitis - Abstract
PURPOSE: To describe an alternate surgical technique for fluocinolone acetonide (Retisert) implantation in patients with extensive pars plana and pars plicata fibrosis secondary to chronic non-infectious uveitis. METHODS: This retrospective, interventional case series included five eyes of four patients who had poorly controlled chronic non-infectious uveitis. Retisert was implanted successfully using a novel approach. The device was introduced into the posterior segment through the anterior chamber and posterior capsulotomy, forgoing the need for full-thickness scleral incision and minimizing the risk of retinal detachment and associated complications. RESULTS: Five eyes underwent passage of Retisert implant through the anterior segment via a limbal incision and a posterior capsulotomy. Retisert was successfully implanted in all patients in the posterior chamber. No intraoperative or postoperative complications were encountered. Up until the last follow-up, all eyes demonstrated the stability of the implant. Visual acuity improved in four out of five eyes. CONCLUSIONS: Retisert can be implanted via the anterior chamber in patients with extensive fibrosis in the pars plana and pars plicata regions. This approach may minimize the risk of retinal traction and damage to the implant when compared to the traditional full-thickness sclerotomy method in these high-risk cases.
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- 2024
32. Fine Grained Analysis and Optimization of Large Scale Automotive Radar Networks
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Shah, Mohammad Taha, Ghatak, Gourab, and Ram, Shobha Sundar
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Computer Science - Information Theory ,Electrical Engineering and Systems Science - Signal Processing - Abstract
Advanced driver assistance systems (ADAS) enabled by automotive radars have significantly enhanced vehicle safety and driver experience. However, the extensive use of radars in dense road conditions introduces mutual interference, which degrades detection accuracy and reliability. Traditional interference models are limited to simple highway scenarios and cannot characterize the performance of automotive radars in dense urban environments. In our prior work, we employed stochastic geometry (SG) to develop two automotive radar network models: the Poisson line Cox process (PLCP) for dense city centers and smaller urban zones and the binomial line Cox process (BLCP) to encompass both urban cores and suburban areas. In this work, we introduce the meta-distribution (MD) framework upon these two models to distinguish the sources of variability in radar detection metrics. Additionally, we optimize the radar beamwidth and transmission probability to maximize the number of successful detections of a radar node in the network. Further, we employ a computationally efficient Chebyshev-Markov (CM) bound method for reconstructing MDs, achieving higher accuracy than the conventional Gil-Pelaez theorem. Using the framework, we analyze the specific impacts of beamwidth, detection range, and interference on radar detection performance and offer practical insights for developing adaptive radar systems tailored to diverse traffic and environmental conditions., Comment: Submitted to IEEE TSP
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- 2024
33. Minimizing Nature's Cost: Exploring Data-Free Physics-Informed Neural Network Solvers for Fluid Mechanics Applications
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Elmaradny, Abdelrahman, Atallah, Ahmed, and Taha, Haithem
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Physics - Fluid Dynamics ,Physics - Computational Physics - Abstract
In this paper, we present a novel approach for fluid dynamic simulations by harnessing the capabilities of Physics-Informed Neural Networks (PINNs) guided by the newly unveiled principle of minimum pressure gradient (PMPG). In a PINN formulation, the physics problem is converted into a minimization problem (typically least squares). The PMPG asserts that for incompressible flows, the total magnitude of the pressure gradient over the domain must be minimum at every time instant, turning fluid mechanics into minimization problems, making it an excellent choice for PINNs formulation. Following the PMPG, the proposed PINN formulation seeks to construct a neural network for the flow field that minimizes Nature's cost function for incompressible flows in contrast to traditional PINNs that minimize the residuals of the Navier-Stokes equations. This technique eliminates the need to train a separate pressure model, thereby reducing training time and computational costs. We demonstrate the effectiveness of this approach through a case study of inviscid flow around a cylinder, showing its ability to capture the underlying physics, while reducing computational cost and training time. The proposed approach outperforms the traditional PINNs approach in terms of Root Mean Square Error, training time, convergence rate, and compliance with physical metrics. While demonstrated on a simple geometry, the methodology is extendable to more complex flow fields (e.g., Three-Dimensional, unsteady, viscous flows) within the incompressible realm, which is the region of applicability of the PMPG.
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- 2024
34. BiomedCoOp: Learning to Prompt for Biomedical Vision-Language Models
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Koleilat, Taha, Asgariandehkordi, Hojat, Rivaz, Hassan, and Xiao, Yiming
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Computer Science - Computer Vision and Pattern Recognition ,Computer Science - Computation and Language - Abstract
Recent advancements in vision-language models (VLMs), such as CLIP, have demonstrated substantial success in self-supervised representation learning for vision tasks. However, effectively adapting VLMs to downstream applications remains challenging, as their accuracy often depends on time-intensive and expertise-demanding prompt engineering, while full model fine-tuning is costly. This is particularly true for biomedical images, which, unlike natural images, typically suffer from limited annotated datasets, unintuitive image contrasts, and nuanced visual features. Recent prompt learning techniques, such as Context Optimization (CoOp) intend to tackle these issues, but still fall short in generalizability. Meanwhile, explorations in prompt learning for biomedical image analysis are still highly limited. In this work, we propose BiomedCoOp, a novel prompt learning framework that enables efficient adaptation of BiomedCLIP for accurate and highly generalizable few-shot biomedical image classification. Our approach achieves effective prompt context learning by leveraging semantic consistency with average prompt ensembles from Large Language Models (LLMs) and knowledge distillation with a statistics-based prompt selection strategy. We conducted comprehensive validation of our proposed framework on 11 medical datasets across 9 modalities and 10 organs against existing state-of-the-art methods, demonstrating significant improvements in both accuracy and generalizability. The code will be publicly available at https://github.com/HealthX-Lab/BiomedCoOp., Comment: 18 pages, 5 figures, 10 tables
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- 2024
35. The Epistemology of Contemporary Physics: Classical Mechanics II
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Sochi, Taha
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Physics - Popular Physics ,Physics - History and Philosophy of Physics - Abstract
In this paper of "The Epistemology of Contemporary Physics" series we investigate Newton's third law and discuss and analyze its epistemological significance from some aspects with special attention to its relation to the principle of conservation of linear and angular momentum. The main issue in this investigation is the potential violations of this law according to the claims made in the literature of mainstream physics. This issue may cast a shadow on the validity of classical mechanics, and its Newtonian formulation in particular, formally and epistemologically and could have important implications and consequences on contemporary physics in general. However, what is more important about this issue from our perspective is the lack of clarity, comprehensibility and coherence in the investigation and analysis of this issue and its implications marked by the absence of appropriate conceptual and epistemological frameworks to deal with this issue properly and systematically. As a result, what we find in the literature is a collection of contradicting views which are mostly based on personal choices and preferences and selective or biased theoretical analysis with the lack of proper experimental verification and substantiation., Comment: 29 pages
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- 2024
36. Deep Learning 2.0: Artificial Neurons That Matter -- Reject Correlation, Embrace Orthogonality
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Bouhsine, Taha
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Computer Science - Machine Learning ,Computer Science - Computer Vision and Pattern Recognition ,Mathematics - General Topology - Abstract
We introduce a yat-product-powered neural network, the Neural Matter Network (NMN), a breakthrough in deep learning that achieves non-linear pattern recognition without activation functions. Our key innovation relies on the yat-product and yat-product, which naturally induces non-linearity by projecting inputs into a pseudo-metric space, eliminating the need for traditional activation functions while maintaining only a softmax layer for final class probability distribution. This approach simplifies network architecture and provides unprecedented transparency into the network's decision-making process. Our comprehensive empirical evaluation across different datasets demonstrates that NMN consistently outperforms traditional MLPs. The results challenge the assumption that separate activation functions are necessary for effective deep-learning models. The implications of this work extend beyond immediate architectural benefits, by eliminating intermediate activation functions while preserving non-linear capabilities, yat-MLP establishes a new paradigm for neural network design that combines simplicity with effectiveness. Most importantly, our approach provides unprecedented insights into the traditionally opaque "black-box" nature of neural networks, offering a clearer understanding of how these models process and classify information., Comment: fixed proof, added softermax
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- 2024
37. Circulating Currents in Electric Machines: Positive Impact of The End Windings Length on Losses
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Hajji, Taha El, Lehikoinen, Antti, and Belahcen, Anouar
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Electrical Engineering and Systems Science - Systems and Control ,Mathematical Physics - Abstract
Circulating currents occurring in windings of electric machines received rising interest recent years. Circulating currents represent unwanted currents flowing between parallel-connected conductors. This phenomenon is due to various reasons such as asymmetries in the winding and differences in electric potential between parallel-connected conductors. This effect occurs both at no-load and on-load conditions, and always lead to uneven distribution of the current between the parallel conductors, therefore leading to higher losses, as proven in the authors' previous work. Circulating currents are occurring mainly due to asymmetries and electric potential difference in the active part, meaning that long end windings are advantageous to mitigate the effect of circulating currents. Losses due to circulating currents decrease at a rate proportional to the inverse square of the end windings length. The aim of this paper is to mathematically prove this property and present a case study application in an electric machine.
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- 2024
38. Fitting Multiple Machine Learning Models with Performance Based Clustering
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Lorasdagi, Mehmet Efe, Koc, Ahmet Berker, Koc, Ali Taha, and Kozat, Suleyman Serdar
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Computer Science - Machine Learning ,Electrical Engineering and Systems Science - Signal Processing - Abstract
Traditional machine learning approaches assume that data comes from a single generating mechanism, which may not hold for most real life data. In these cases, the single mechanism assumption can result in suboptimal performance. We introduce a clustering framework that eliminates this assumption by grouping the data according to the relations between the features and the target values and we obtain multiple separate models to learn different parts of the data. We further extend our framework to applications having streaming data where we produce outcomes using an ensemble of models. For this, the ensemble weights are updated based on the incoming data batches. We demonstrate the performance of our approach over the widely-studied real life datasets, showing significant improvements over the traditional single-model approaches.
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- 2024
39. NeuReg: Domain-invariant 3D Image Registration on Human and Mouse Brains
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Razzaq, Taha and Iqbal, Asim
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Computer Science - Computer Vision and Pattern Recognition ,Computer Science - Artificial Intelligence ,Computer Science - Machine Learning ,Computer Science - Neural and Evolutionary Computing ,Quantitative Biology - Quantitative Methods - Abstract
Medical brain imaging relies heavily on image registration to accurately curate structural boundaries of brain features for various healthcare applications. Deep learning models have shown remarkable performance in image registration in recent years. Still, they often struggle to handle the diversity of 3D brain volumes, challenged by their structural and contrastive variations and their imaging domains. In this work, we present NeuReg, a Neuro-inspired 3D image registration architecture with the feature of domain invariance. NeuReg generates domain-agnostic representations of imaging features and incorporates a shifting window-based Swin Transformer block as the encoder. This enables our model to capture the variations across brain imaging modalities and species. We demonstrate a new benchmark in multi-domain publicly available datasets comprising human and mouse 3D brain volumes. Extensive experiments reveal that our model (NeuReg) outperforms the existing baseline deep learning-based image registration models and provides a high-performance boost on cross-domain datasets, where models are trained on 'source-only' domain and tested on completely 'unseen' target domains. Our work establishes a new state-of-the-art for domain-agnostic 3D brain image registration, underpinned by Neuro-inspired Transformer-based architecture., Comment: 15 pages, 5 figures, 5 tables
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- 2024
40. Designing a Light-based Communication System with a Biomolecular Receiver
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Sajjad, Taha and Eckford, Andrew W.
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Computer Science - Information Theory - Abstract
Biological systems transduce signals from their surroundings in numerous ways. This paper introduces a communication system using the light-gated ion channel Channelrhodopsin-2 (ChR2), which causes an ion current to flow in response to light. Our design includes a ChR2-based receiver along with encoding, modulation techniques and detection. Analyzing the resulting communication system, we discuss the effect of different parameters on the performance of the system. Finally, we discuss its potential design in the context of bio-engineering and light-based communication and show that the data rate scales up with the number of receptors, indicating that high-speed communication may be possible., Comment: 11 pages, 16 figures and 4 Tables
- Published
- 2024
- Full Text
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41. dsld: A Socially Relevant Tool for Teaching Statistics
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Abdullah, Taha, Ashok, Arjun, Estrada, Brandon, Matloff, Norman, and Mittal, Aditya
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Statistics - Methodology ,Computer Science - Information Retrieval ,Computer Science - Machine Learning ,Statistics - Applications - Abstract
The growing power of data science can play a crucial role in addressing social discrimination, necessitating nuanced understanding and effective mitigation strategies of potential biases. Data Science Looks At Discrimination (dsld) is an R and Python package designed to provide users with a comprehensive toolkit of statistical and graphical methods for assessing possible discrimination related to protected groups, such as race, gender, and age. Our software offers techniques for discrimination analysis by identifying and mitigating confounding variables, along with methods for reducing bias in predictive models. In educational settings, dsld offers instructors powerful tools to teach important statistical principles through motivating real world examples of discrimination analysis. The inclusion of an 80-page Quarto book further supports users, from statistics educators to legal professionals, in effectively applying these analytical tools to real world scenarios., Comment: To be submitted to the Journal of Statistics and Data Science Education
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- 2024
42. Observability and Generalized Sensor Placement for Nonlinear Quality Models in Drinking Water Networks
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Kazma, Mohamad H., Elsherif, Salma M., and Taha, Ahmad F.
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Electrical Engineering and Systems Science - Systems and Control - Abstract
This paper studies the problem of optimal geographic placement of water quality (WQ) sensors in drinking water distribution networks (WDNs), with a specific focus on chlorine transport, decay, and reaction models. Such models are traditionally used as suitable proxies for WQ. The literature on this topic is indeed inveterate, but has a key limitation: it utilizes simplified single-species decay and reaction models that do not capture WQ transients for nonlinear, multi-species interactions. This results in sensor placements that do not account for nonlinear WQ dynamics. Furthermore, and as WQ simulations are parameterized by hydraulic profiles and demand patterns, the placement of sensors are often hydraulics-dependent. This study produces a simple algorithm that addresses the two aforementioned limitations. The presented algorithm is grounded in nonlinear dynamic system sciences and observability theory, and yields sensor placements that are robust to hydraulic changes. Thorough case studies on benchmark water networks are provided. The key findings provide practical recommendations for WDN operators.
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- 2024
43. Dispersion Measures of Fast Radio Bursts through the Epoch of Reionization
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Ziegler, Joshua J., Shapiro, Paul R., Dawoodbhoy, Taha, Beniamini, Paz, Kumar, Pawan, Freese, Katherine, Ocvirk, Pierre, Aubert, Dominique, Lewis, Joseph S. W., Teyssier, Romain, Park, Hyunbae, Ahn, Kyungjin, Sorce, Jenny G., Iliev, Ilian T., Yepes, Gustavo, and Gottlober, Stefan
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Astrophysics - Cosmology and Nongalactic Astrophysics ,Astrophysics - Solar and Stellar Astrophysics - Abstract
Dispersion measures (DM) of fast radio bursts (FRBs) probe the density of electrons in the intergalactic medium (IGM) along their lines-of-sight, including the average density versus distance to the source and its variations in direction. While previous study focused on low-redshift, FRBs are potentially detectable out to high redshift, where their DMs can, in principle, probe the epoch of reionization (EOR) and its patchiness. We present the first predictions from large-scale, radiation-hydrodynamical simulation of fully-coupled galaxy formation and reionization, using Cosmic Dawn (``CoDa")~II to model the density and ionization fields of the universe down to redshifts through the end of the EOR at $z_{re}\approx6.1$. Combining this with an N-body simulation CoDa~II--Dark Matter of the fully-ionized epoch from the EOR to the present, we calculate the mean and standard deviation of FRB DMs as functions of their source redshift. The mean and standard deviation of DM increase with redshift, reaching a plateau by $z(x_{HII}\lesssim0.25)\gtrsim8$, i.e. well above $z_{re}$. The mean-DM asymptote $\mathcal{DM}_{max} \approx 5900~\mathrm{pc\, cm^{-3}}$ reflects the end of the EOR and its duration. The standard deviation there is $\sigma_{DM, max}\approx497 ~\mathrm{pc\, cm^{-3}}$, reflecting inhomogeneities of both patchy reionization and density. Inhomogeneities in ionization during the EOR contribute $\mathcal{O}(1$ per cent) of this value of $\sigma_{DM,max}$ from FRBs at redshifts $z\gtrsim 8$. Current estimates of FRB rates suggest this may be detectable within a few years of observation., Comment: 14 pages, 10 figures, 2 tables, 2 appendices
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- 2024
44. Control Node Placement and Structural Controllability of Water Quality Dynamics in Drinking Networks
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Elsherif, Salma M. and Taha, Ahmad F.
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Electrical Engineering and Systems Science - Systems and Control - Abstract
Chlorine, the most widely used disinfectant, needs to be adequately distributed in water distribution networks (WDNs) to maintain consistent residual levels and ensure water safety. This is performed through control node injections at the treatment plant via booster stations scattered in WDNs. While previous studies have applied various optimization metrics for booster station placement, many have failed to consider the coverage of the station injections and the dynamic nature of WDNs. In particular, variations in hydraulics and demand significantly impact the reachability and efficacy of chlorine injections which then impact optimal placement of booster stations. This study introduces a novel formulation that combines control- and graph-theoretic approaches to solve the booster station placement problem. Unlike traditional methods, our approach emphasizes maximizing the system's ability to control disinfectant levels with minimal energy, taking into account the time-varying hydraulic profiles that lead to different optimal station placements. We propose a simple weighting technique to determine the placements by assessing the structural controllability of each configuration, based on the network's topology and independent of specific parameters like decay rates or pipe roughness. This method ensures effective chlorine coverage across the network. Our approach is validated on different networks, demonstrating its operational effectiveness, scalability, and practicality.
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- 2024
45. Dynamic Uncertainty Ranking: Enhancing Retrieval-Augmented In-Context Learning for Long-Tail Knowledge in LLMs
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Yu, Shuyang, Bao, Runxue, Bhatia, Parminder, Kass-Hout, Taha, Zhou, Jiayu, and Xiao, Cao
- Subjects
Computer Science - Computation and Language - Abstract
Large language models (LLMs) can learn vast amounts of knowledge from diverse domains during pre-training. However, long-tail knowledge from specialized domains is often scarce and underrepresented, rarely appearing in the models' memorization. Prior work has shown that in-context learning (ICL) with retriever augmentation can help LLMs better capture long-tail knowledge, reducing their reliance on pre-trained data. Despite these advances, we observe that LLM predictions for long-tail questions remain uncertain to variations in retrieved samples. To take advantage of the uncertainty in ICL for guiding LLM predictions toward correct answers on long-tail samples, we propose a reinforcement learning-based dynamic uncertainty ranking method for ICL that accounts for the varying impact of each retrieved sample on LLM predictions. Our approach prioritizes more informative and stable samples while demoting misleading ones, updating rankings based on the feedback from the LLM w.r.t. each retrieved sample. To enhance training efficiency and reduce query costs, we introduce a learnable dynamic ranking threshold, adjusted when the model encounters negative prediction shifts. Experimental results on various question-answering datasets from different domains show that our method outperforms the best baseline by $2.76\%$, with a notable $5.96\%$ boost in accuracy on long-tail questions that elude zero-shot inference., Comment: Accepted by NAACL 2025
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- 2024
46. Order of Addition in Orthogonally Blocked Mixture and Component-Amount Designs
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Hasan, Taha and Ahmad, Touqeer
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Statistics - Methodology ,Statistics - Applications - Abstract
Mixture experiments often involve process variables, such as different chemical reactors in a laboratory or varying mixing speeds in a production line. Organizing the runs in orthogonal blocks allows the mixture model to be fitted independently of the process effects, ensuring clearer insights into the role of each mixture component. Current literature on mixture designs in orthogonal blocks ignores the order of addition of mixture components in mixture blends. This paper considers the order of addition of components in mixture and mixture-amount experiments, using the variable total amount taken into orthogonal blocks. The response depends on both the mixture proportions or the amounts of the components and the order of their addition. Mixture designs in orthogonal blocks are constructed to enable the estimation of mixture or component-amount model parameters and the order-of-addition effects. The G-efficiency criterion is used to assess how well the design supports precise and unbiased estimation of the model parameters. The fraction of the Design Space plot is used to provide a visual assessment of the prediction capabilities of a design across the entire design space., Comment: 15, 1
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- 2024
47. Two-spinon effects on the thermal Tonks-Girardeau gas
- Author
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Sant'Ana, Felipe Taha and Liu, Hui
- Subjects
Condensed Matter - Quantum Gases ,Condensed Matter - Statistical Mechanics ,Nonlinear Sciences - Exactly Solvable and Integrable Systems - Abstract
We study the effects of the two-spinon excitations on the field-field correlator of the Tonks-Girardeau gas at thermal equilibrium. Recently, such excitations were investigated for the ground state of the system, and discovered that they prevail for evaluating the one-body correlation function of the infinitely repulsive Lieb-Liniger model. Here we extend it for finite temperatures., Comment: 19 pages, 4 figures
- Published
- 2024
48. Some Characterizations of Weakly Pseudo Primary 2-Absorbing Submodules in Terms of some Types of Modules
- Author
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Taha, Omar Hisham and Salih, Marwa Abdullah
- Subjects
Mathematics - Rings and Algebras ,Mathematics - Commutative Algebra ,13A05, 13C13, 13C60, 13C10, 13E05, 13F15 ,G.1.3 - Abstract
All rings are commutative, and all modules are unital. The purpose of this paper is to investigate the characterizations of weakly pseudo primary 2-absorbing sub-module in terms of some types of modules. We provide characterizations for the class of multiplication modules with the help of some types of modules such as faithful, non-singular, Z-regular, and projective modules. Furthermore, we add some conditions to prove the residual of a weakly pseudo primary 2-absorbing sub-module is a weakly pseudo primary 2-absorbing ideal., Comment: 12 pages
- Published
- 2024
49. ChunkRAG: Novel LLM-Chunk Filtering Method for RAG Systems
- Author
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Singh, Ishneet Sukhvinder, Aggarwal, Ritvik, Allahverdiyev, Ibrahim, Taha, Muhammad, Akalin, Aslihan, Zhu, Kevin, and O'Brien, Sean
- Subjects
Computer Science - Computation and Language - Abstract
Retrieval-Augmented Generation (RAG) systems using large language models (LLMs) often generate inaccurate responses due to the retrieval of irrelevant or loosely related information. Existing methods, which operate at the document level, fail to effectively filter out such content. We propose LLM-driven chunk filtering, ChunkRAG, a framework that enhances RAG systems by evaluating and filtering retrieved information at the chunk level. Our approach employs semantic chunking to divide documents into coherent sections and utilizes LLM-based relevance scoring to assess each chunk's alignment with the user's query. By filtering out less pertinent chunks before the generation phase, we significantly reduce hallucinations and improve factual accuracy. Experiments show that our method outperforms existing RAG models, achieving higher accuracy on tasks requiring precise information retrieval. This advancement enhances the reliability of RAG systems, making them particularly beneficial for applications like fact-checking and multi-hop reasoning.
- Published
- 2024
50. Link, Synthesize, Retrieve: Universal Document Linking for Zero-Shot Information Retrieval
- Author
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Hwang, Dae Yon, Taha, Bilal, Pande, Harshit, and Nechaev, Yaroslav
- Subjects
Computer Science - Artificial Intelligence ,Computer Science - Information Retrieval ,Computer Science - Machine Learning - Abstract
Despite the recent advancements in information retrieval (IR), zero-shot IR remains a significant challenge, especially when dealing with new domains, languages, and newly-released use cases that lack historical query traffic from existing users. For such cases, it is common to use query augmentations followed by fine-tuning pre-trained models on the document data paired with synthetic queries. In this work, we propose a novel Universal Document Linking (UDL) algorithm, which links similar documents to enhance synthetic query generation across multiple datasets with different characteristics. UDL leverages entropy for the choice of similarity models and named entity recognition (NER) for the link decision of documents using similarity scores. Our empirical studies demonstrate the effectiveness and universality of the UDL across diverse datasets and IR models, surpassing state-of-the-art methods in zero-shot cases. The developed code for reproducibility is included in https://github.com/eoduself/UDL, Comment: Accepted for publication at EMNLP 2024 Main Conference
- Published
- 2024
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