96 results on '"Takemoto JY"'
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2. Bioactive lipopeptides of ice-nucleating snow bacterium Pseudomonas syringae strain 31R1
- Author
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Fiore A, Mannina L, Sobolev AP, Salzano AM, Scaloni A, Grgurina I, Fullone MR, Gallo M, Swasey C, Fogliano V, and Takemoto JY.
- Abstract
The production of secondary metabolite lipopeptides by ice-nucleating Pseudomonas syringae strain 31R1 was investigated. Pseudomonas syringae strain 31R1 is a rifampicin-resistant derivative of P. syringae no. 31 used for the commercial production of snow. It is shown that P. syringae strain 31R1 produces antifungal lipodepsipeptides, syringomycins E and G, and, in addition, a novel and unique lipopeptide, peptin31. Spectroscopic and spectrometric analyses revealed that peptin31 is a linear undecalipopeptide with sequence identities to N- and C-terminal portions but lacking 11 amino acids of known lipodepsipeptide syringopeptin SPPhv. Peptin31 displayed antifungal activities against Rhodotorula pilimanae, Rhizoctonia solani, and Trichoderma harzianum and also hemolytic and antibacterial activities. Extracts of P. syringae strain 31R1 grown in medium with chloride were fungicidal, but not when grown without chloride. The latter extracts lacked peptin 31 and contained des-chloro forms of syringomycins E and G with low antifungal activities. Thus, the three lipopeptides account for the fungicidal properties of P. syringae 31R1 extracts. The occurrence of these bioactive metabolites should be considered when P. syringae no. 31 and its derivatives are used in products for making artificial snow.
- Published
- 2008
3. Synthesis of kanamycin-azole hybrids and investigation of their antifungal activities.
- Author
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Poudyal N, Subedi YP, Shakespear M, Grilley M, Takemoto JY, and Chang CT
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- Structure-Activity Relationship, Candida albicans drug effects, Candida drug effects, Molecular Structure, Humans, Dose-Response Relationship, Drug, Antifungal Agents pharmacology, Antifungal Agents chemical synthesis, Antifungal Agents chemistry, Microbial Sensitivity Tests, Kanamycin pharmacology, Kanamycin chemistry, Kanamycin chemical synthesis, Cryptococcus neoformans drug effects, Azoles chemistry, Azoles pharmacology, Azoles chemical synthesis
- Abstract
The World Health Organization (WHO) recognizes Candida albicans and Cryptococcus neoformans as the critical priority fungal pathogens for which therapeutic solutions are needed. Azole-based antifungal agents, including triazoles, diazoles, and thiazoles, are widely used in the treatments for fungal infections. In light of past successes in the transformation of antibacterial kanamycin into antifungal derivatives via chemical modifications, a new library of kanamycin-azole hybrids was synthesized and tested against a panel of azole-resistant and susceptible Candida and Cryptococcus strains. Structure activity relationship (SAR) studies revealed pivotal roles for antifungal activity of the azole ring (imidazole vs triazole) and halogen substituents on the benzene ring (F vs Cl). Most notably, hybrids 13, 14 and 15 were active against resistant C. albicans, C. tropicalis and C. neoformans strains and non-toxic towards mammalian cells. Mode of action investigations using fluorogenic dyes, (SYTOX
TM ) showed the fungal active compounds could permeabilize fungal membranes even at ¼ MICs. These findings reveal novel azole-based antifungals that could offer new therapeutic options for candidiasis and cryptococcosis., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)- Published
- 2024
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4. Mesobiliverdin IXα-enriched microalgae feed additive eliminates reliance on antibiotic tylosin to promote intestinal health of weaning piglets.
- Author
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Liao TS, Chen CY, Lin CS, Chang CT, Takemoto JY, and Lin YY
- Subjects
- Animals, Swine, Weaning, Tylosin pharmacology, Anti-Bacterial Agents pharmacology, Diet veterinary, Cytokines, Animal Feed analysis, Dietary Supplements, Microalgae
- Abstract
Weaning is a critical period in raising pigs. Novel animal feed additives that promote gut health and regulate immune function of piglets without antibiotics are needed. In this study, we aimed to test the ability of mesobiliverdin IXα-enriched microalgae (MBV IXα-enriched microalgae) to eliminate reliance on antibiotics to promote intestinal health in piglets. Eighty 28-day-old weaned piglets were randomly allocated to four groups each with four replicate pens and five piglets per pen. The dietary treatments were a basal diet as control (NC), basal diet plus 0.05% tylosin (PC), basal diet plus 0.1% or 0.5% MBV IXα-enriched microalgae as low (MBV-SP1) or high (MBV-SP2) dose respectively. All treated animals showed no significant differences in live weight, average daily gain and feed efficiency compared to control animals. Histological examination showed that MBV-SP1 and particularly MBV-SP2 increased the ratio of villus height to crypt depth in the jejunum and ileum compared to NC (p < 0.05). Similarly, tylosin treatment also increased villi lengths and the ratio of villus height to crypt depth in the jejunum and ileum compared to the NC (p < 0.05). MBV-SP1 and particularly MBV-SP2 reduced the levels of inflammatory cytokines interleukin-6 and tumour necrosis factor-alpha in the small intestine. MBV-SP2 and tylosin similarly reduced the lipid peroxidation marker (TBARS value) in the duodenum and ileum. In conclusion, feed supplementation with MBV IXα-enriched microalgae improved gut health by villus height and production of immunomodulators that correlated with down-regulated secretion of inflammatory cytokines., (© 2023 Wiley-VCH GmbH. Published by John Wiley & Sons Ltd.)
- Published
- 2023
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5. Amphiphilic aminoglycosides: Modifications that revive old natural product antibiotics.
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Takemoto JY, Altenberg GA, Poudyal N, Subedi YP, and Chang CT
- Abstract
Widely-used Streptomyces -derived antibacterial aminoglycosides have encountered challenges because of antibiotic resistance and toxicity. Today, they are largely relegated to medicinal topical applications. However, chemical modification to amphiphilic aminoglycosides can revive their efficacy against bacterial pathogens and expand their targets to other pathogenic microbes and disorders associated with hyperactive connexin hemichannels. For example, amphiphilic versions of neomycin and neamine are not subject to resistance and have expanded antibacterial spectra, and amphiphilic kanamycins are effective antifungals and have promising therapeutic uses as connexin hemichannel inhibitors. With further research and discoveries aimed at improved formulations and delivery, amphiphilic aminoglycosides may achieve new horizons in pharmacopeia and agriculture for Streptomyces aminoglycosides beyond just serving as topical antibacterials., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Takemoto, Altenberg, Poudyal, Subedi and Chang.)
- Published
- 2022
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6. Mesobiliverdin IXα ameliorates osteoporosis via promoting osteogenic differentiation of mesenchymal stem cells.
- Author
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Lin YY, Takemoto JY, Chang CT, and Peng CA
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- Animals, Biliverdine analogs & derivatives, Biomarkers metabolism, Cell Differentiation, Cells, Cultured, Humans, Mice, Osteogenesis, Mesenchymal Stem Cells, Osteoporosis drug therapy, Osteoporosis metabolism
- Abstract
Heme oxygenase-1 (HO-1) expression promotes osteogenesis, but the mechanisms remain unclear and therapeutic strategies using it to target bone disorders such as osteoporosis have not progressed. Mesobiliverdin IXα is a naturally occurring bilin analog of HO-1 catalytic product biliverdin IXα. Inclusion of mesobiliverdin IXα in the feed diet of ovariectomized osteoporotic mice was observed to increase femur bone volume, trabecular thickness and osteogenesis serum markers osteoprotegrin and osteocalcin and to decrease bone resorption serum markers cross-linked N-teleopeptide and tartrate-resistant acid phosphatase 5b. Moreover, in vitro exposure of human bone marrow mesenchymal stem cells to mesobiliverdin IXα enhanced osteogenic differentiation efficiency by two-fold over non-exposed controls. Our results imply that mesobiliverdin IXα promotes osteogenesis in ways that reflect the potential therapeutic effects of induced HO-1 expression in alleviating osteoporosis., Competing Interests: Declaration of competing interest The authors declare no conflict of interest., (Copyright © 2022 Elsevier Inc. All rights reserved.)
- Published
- 2022
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7. Effects of Mesobiliverdin IXα-Enriched Microalgae Feed on Gut Health and Microbiota of Broilers.
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Chang CT, Takemoto JY, Chang PE, AlFindee MN, and Lin YY
- Abstract
Gut inflammatory bowel diseases (IBDs) links to animal medicinal feed and antibiotic-resistance are fueling major economic impacts in the agricultural livestock industry. New animal feeds that promote livestock gut health and control of IBDs without antibiotics are needed. This study investigates the effects of mesobiliverdin IXα (MBV)-enriched microalgae spirulina extracts on the growth performance, blood parameters, intestinal morphology, and gut microbiota of broilers. A total of 288 1-day-old broiler chicks (Arbor Acres) were randomly allotted to six dietary treatments (4 pens/treatment and 12 birds/pen). The dietary treatments comprised a basal diet as control (CON), basal diet plus 0.05 and 0.1% microalgae extract as low and high dose, respectively (SP1 and SP2), basal diet plus 0.05 and 0.1% MBV-enriched microalgae extract as low and high dose, respectively (MBV-SP1 and MBV-SP2), and basal diet plus 0.1% amoxicillin (AMX). All treated animals showed no significant differences in live weight, average daily gain, and feed efficiency compared to control animals. Histological examination showed that AMX treatment decreased the villi lengths of the duodenum and ileum below control villi length ( P < 0.05) while MBV-SP1 and particularly MBV-SP2 increased villi lengths in the duodenum, jejunum, and ileum above AMX -treatment lengths ( P < 0.05). The Firmicutes / Bacteroidetes ratio increased in the cecum of broilers fed AMX ( P < 0.05) while SP2, MBV-SP1, and MBV-SP2-fed animals showed (in order) increasing ratios up to the AMX level. The abundance of bacterial species of the genus Lactobacillus increased in MBV-SP1 and MBV-SP2-fed groups including a striking increase in Lactobacillus salivarius abundance with MBV-SP2 ( P < 0.05). Feeding MBV-SP1 and MBV-SP2 decreased the level of pro-inflammatory cytokine IL-6 in plasma of broilers to a greater extent than SP1 and SP2. These results reveal that MBV-enriched microalgae extracts improve the intestinal health and beneficial microflora composition of broilers., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Chang, Takemoto, Chang, AlFindee and Lin.)
- Published
- 2021
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8. Label-free discrimination and quantitative analysis of oxidative stress induced cytotoxicity and potential protection of antioxidants using Raman micro-spectroscopy and machine learning.
- Author
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Zhang W, Rhodes JS, Garg A, Takemoto JY, Qi X, Harihar S, Tom Chang CW, Moon KR, and Zhou A
- Subjects
- Humans, Machine Learning, Oxidative Stress, Spectrum Analysis, Raman, Vehicle Emissions, Antioxidants pharmacology, Particulate Matter
- Abstract
Diesel exhaust particles (DEPs) are major constituents of air pollution and associated with numerous oxidative stress-induced human diseases. In vitro toxicity studies are useful for developing a better understanding of species-specific in vivo conditions. Conventional in vitro assessments based on oxidative biomarkers are destructive and inefficient. In this study, Raman spectroscopy, as a non-invasive imaging tool, was used to capture the molecular fingerprints of overall cellular component responses (nucleic acid, lipids, proteins, carbohydrates) to DEP damage and antioxidant protection. We apply a novel data visualization algorithm called PHATE, which preserves both global and local structure, to display the progression of cell damage over DEP exposure time. Meanwhile, a mutual information (MI) estimator was used to identify the most informative Raman peaks associated with cytotoxicity. A health index was defined to quantitatively assess the protective effects of two antioxidants (resveratrol and mesobiliverdin IXα) against DEP induced cytotoxicity. In addition, a number of machine learning classifiers were applied to successfully discriminate different treatment groups with high accuracy. Correlations between Raman spectra and immunomodulatory cytokine and chemokine levels were evaluated. In conclusion, the combination of label-free, non-disruptive Raman micro-spectroscopy and machine learning analysis is demonstrated as a useful tool in quantitative analysis of oxidative stress induced cytotoxicity and for effectively assessing various antioxidant treatments, suggesting that this framework can serve as a high throughput platform for screening various potential antioxidants based on their effectiveness at battling the effects of air pollution on human health., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier B.V. All rights reserved.)
- Published
- 2020
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9. Microbial lag phase can be indicative of, or independent from, cellular stress.
- Author
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Hamill PG, Stevenson A, McMullan PE, Williams JP, Lewis ADR, S S, Stevenson KE, Farnsworth KD, Khroustalyova G, Takemoto JY, Quinn JP, Rapoport A, and Hallsworth JE
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- Cell Survival, Culture Media, Temperature, Aspergillus physiology, Bacillus subtilis physiology, Cell Growth Processes physiology, Escherichia coli physiology, Stress, Physiological physiology
- Abstract
Measures of microbial growth, used as indicators of cellular stress, are sometimes quantified at a single time-point. In reality, these measurements are compound representations of length of lag, exponential growth-rate, and other factors. Here, we investigate whether length of lag phase can act as a proxy for stress, using a number of model systems (Aspergillus penicillioides; Bacillus subtilis; Escherichia coli; Eurotium amstelodami, E. echinulatum, E. halophilicum, and E. repens; Mrakia frigida; Saccharomyces cerevisiae; Xerochrysium xerophilum; Xeromyces bisporus) exposed to mechanistically distinct types of cellular stress including low water activity, other solute-induced stresses, and dehydration-rehydration cycles. Lag phase was neither proportional to germination rate for X. bisporus (FRR3443) in glycerol-supplemented media (r
2 = 0.012), nor to exponential growth-rates for other microbes. In some cases, growth-rates varied greatly with stressor concentration even when lag remained constant. By contrast, there were strong correlations for B. subtilis in media supplemented with polyethylene-glycol 6000 or 600 (r2 = 0.925 and 0.961), and for other microbial species. We also analysed data from independent studies of food-spoilage fungi under glycerol stress (Aspergillus aculeatinus and A. sclerotiicarbonarius); mesophilic/psychrotolerant bacteria under diverse, solute-induced stresses (Brochothrix thermosphacta, Enterococcus faecalis, Pseudomonas fluorescens, Salmonella typhimurium, Staphylococcus aureus); and fungal enzymes under acid-stress (Terfezia claveryi lipoxygenase and Agaricus bisporus tyrosinase). These datasets also exhibited diversity, with some strong- and moderate correlations between length of lag and exponential growth-rates; and sometimes none. In conclusion, lag phase is not a reliable measure of stress because length of lag and growth-rate inhibition are sometimes highly correlated, and sometimes not at all.- Published
- 2020
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10. Scalable and cost-effective tosylation-mediated synthesis of antifungal and fungal diagnostic 6″-Modified amphiphilic kanamycins.
- Author
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Subedi YP, Pandey U, Alfindee MN, Montgomery H, Roberts P, Wight J, Nichols G, Grilley M, Takemoto JY, and Chang CT
- Subjects
- Anti-Bacterial Agents chemistry, Anti-Bacterial Agents economics, Antifungal Agents chemistry, Antifungal Agents economics, Cell Survival drug effects, Cost-Benefit Analysis, Dose-Response Relationship, Drug, HeLa Cells, Humans, Hydrophobic and Hydrophilic Interactions, Kanamycin chemistry, Kanamycin economics, Microbial Sensitivity Tests, Molecular Structure, Structure-Activity Relationship, Surface-Active Agents chemistry, Surface-Active Agents economics, Anti-Bacterial Agents pharmacology, Antifungal Agents pharmacology, Bacteria drug effects, Fungi drug effects, Kanamycin pharmacology, Surface-Active Agents pharmacology
- Abstract
Amphiphilic kanamycins bearing hydrophobic modifications at the 6″ position have attracted interest due to remarkable antibacterial-to-antifungal switches in bioactivity. In this report, we investigate a hurdle that hinders practical applications of these amphiphilic kanamycins: a cost-effective synthesis that allows the incorporation of various connecting functionalities to which the hydrophobic moieties are connected to the kanamycin core. A cost-effective tosylation enables various modifications at the 6″ position, which is scalable to a 90-g scale. The connecting functionalities, such as amine and thiol, were not the dominant factor for biological activity. Instead, the linear chain length played the decisive role. Amphiphilic kanamycin attached with tetradecyl (C14) or hexadecyl (C16) showed strong antifungal and modest antibacterial activities than with shorter chains (C6-C10). However, increases in chain length were closely correlated with an increase in HeLa cell toxicity. Thus, a compromise between the antimicrobial activities and cytotoxicities, for optimal efficacy of amphiphilic kanamycins may contain chain lengths between C8 and C12. Finally, the described synthetic protocol also allows the preparation of a fluorescent amphiphilic kanamycin selective toward fungi., (Copyright © 2019 Elsevier Masson SAS. All rights reserved.)
- Published
- 2019
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11. Antifungal Activities of 4″,6″-Disubstituted Amphiphilic Kanamycins.
- Author
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Alfindee MN, Subedi YP, Grilley MM, Takemoto JY, and Chang CT
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- Cell Membrane metabolism, Cell Membrane Permeability drug effects, Fungi drug effects, Kinetics, Microbial Sensitivity Tests, Molecular Structure, Reactive Oxygen Species metabolism, Structure-Activity Relationship, Antifungal Agents chemistry, Antifungal Agents pharmacology, Kanamycin chemistry, Kanamycin pharmacology
- Abstract
Amphiphilic kanamycins derived from the classic antibiotic kanamycin have attracted interest due to their novel bioactivities beyond inhibition of bacteria. In this study, the recently described 4″,6″-diaryl amphiphilic kanamycins reported as inhibitors of connexin were examined for their antifungal activities. Nearly all 4″,6″-diaryl amphiphilic kanamycins tested had antifungal activities comparable to those of 4″,6″-dialkyl amphiphilic kanamycins, reported previously against several fungal strains. The minimal growth inhibitory concentrations (MICs) correlated with the degree of amphiphilicity (cLogD) of the di-substituted amphiphilic kanamycins. Using the fluorogenic dyes, SYTOX
TM Green and propidium iodide, the most active compounds at the corresponding MICs or at 2×MICs caused biphasic dye fluorescence increases over time with intact cells. Further lowering the concentrations to half MICs caused first-order dye fluorescence increases. Interestingly, 4×MIC or 8×MIC levels resulted in fluorescence suppression that did not correlate with the MIC and plasma membrane permeabilization. The results show that 4″,6″-diaryl amphiphilic kanamycins are antifungal and that amphiphilicity parameter cLogD is useful for the design of the most membrane-active versions. A cautionary limitation of fluorescence suppression was revealed when using fluorogenic dyes to measure cell-permeation mechanisms with these antifungals at high concentrations. Finally, 4″,6″-diaryl amphiphilic kanamycins elevate the production of cellular reactive oxygen species as other reported amphiphilic kanamycins.- Published
- 2019
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12. Development of Fungal Selective Amphiphilic Kanamycin: Cost-Effective Synthesis and Use of Fluorescent Analogs for Mode of Action Investigation.
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Subedi YP, Roberts P, Grilley M, Takemoto JY, and Chang CT
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- Antifungal Agents chemistry, Antifungal Agents economics, Candida drug effects, Candida metabolism, Chemistry Techniques, Synthetic economics, Cryptococcus neoformans drug effects, Cryptococcus neoformans metabolism, Fluorescence, Fusarium drug effects, Fusarium metabolism, Kanamycin chemistry, Kanamycin economics, Microbial Sensitivity Tests, Reactive Oxygen Species metabolism, Antifungal Agents chemical synthesis, Antifungal Agents pharmacology, Chemistry Techniques, Synthetic methods, Kanamycin chemical synthesis, Kanamycin pharmacology
- Abstract
Amphiphilic aminoglycosides have attracted interest due to their novel antifungal activities. A crucial but often neglected factor for drug development in academia is cost of production. Herein is reported a one-step, inexpensive synthesis of amphiphilic alkyl kanamycins constituted with only natural components. The synthetic methodology also enabled the preparation of a series fluorescent amphiphilic aryl kanamycins for direct structure-activity mode of action studies. The lead compounds showed prominent antifungal activities against a panel of fungi, including Fusarium graminearum, Cryptococcus neoformans, and several Candida sp., and also significant antibacterial activities. With fluorescence-based whole cell assays, the aryl amphiphilic kanamycins were observed to permeabilize fungal surface membranes at faster rates than bacterial surface membranes. Also, the antifungal action of the amphiphilic kanamycins was observed to occur in a biphasic mode with an initial fast phase correlated with rapid membrane permeabilization at subminimal inhibitory concentrations and a slower phase membrane permeabilization that elevates the reactive oxygen species production leading to cell death. Inactive hydrophobic amphiphilic kanamycins displayed no membrane permeabilization. The results offer cost-effective methods for producing amphiphilic kanamycins and reveal insights into how nonfungal specific amphiphilic kanamycins can be employed for fungal specific diagnostic and therapeutic applications.
- Published
- 2019
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13. Synthesis and biological activity investigation of azole and quinone hybridized phosphonates.
- Author
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Subedi YP, Alfindee MN, Shrestha JP, Becker G, Grilley M, Takemoto JY, and Chang CT
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- Anti-Bacterial Agents chemical synthesis, Anti-Bacterial Agents chemistry, Antifungal Agents chemical synthesis, Antifungal Agents chemistry, Antineoplastic Agents chemical synthesis, Antineoplastic Agents chemistry, Aspergillus flavus drug effects, Azoles chemistry, Candida albicans drug effects, Cell Proliferation drug effects, Dose-Response Relationship, Drug, Drug Screening Assays, Antitumor, Fusarium drug effects, HeLa Cells, Humans, Methicillin-Resistant Staphylococcus aureus drug effects, Microbial Sensitivity Tests, Molecular Structure, Organophosphonates chemistry, Quinones chemistry, Structure-Activity Relationship, Anti-Bacterial Agents pharmacology, Antifungal Agents pharmacology, Antineoplastic Agents pharmacology, Azoles pharmacology, Organophosphonates pharmacology, Quinones pharmacology
- Abstract
Phosphonates, azoles and quinones are pharmacophores found in bioactive compounds. A series of phosphonates conjugated to azoles and quinones with variable carbon chain lengths were synthesized in 3-4 steps with good yield. Antifungal assay of these compounds showed that ethyl protected phosphates have excellent inhibitory activity against phytopathogenic fungus Fusarium graminearum, and the free-base phosphates have good activity against human pathogenic fungi Aspergillus flavus and Candida albicans. Structure- activity relationship (SAR) studies showed activity increases with longer carbon chain length between phosphonate and anthraquinone analogs consisting of azole and quinone moieties. These newly synthesized compounds also have mild antibacterial activities to Gram positive bacteria, including methicillin-resistant Staphylococcus aureus (MRSA). Cytotoxicity analysis of these compounds against HeLa cells reveals that the phosphoric acid analogs are less toxic compared to ethyl protected phosphonates. Three leads compounds have been identified with prominent antifungal activity and low cytotoxicity., (Copyright © 2018 Elsevier Ltd. All rights reserved.)
- Published
- 2018
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14. Suppression of wheat Fusarium head blight by novel amphiphilic aminoglycoside fungicide K20.
- Author
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Takemoto JY, Wegulo SN, Yuen GY, Stevens JA, Jochum CC, Chang CT, Kawasaki Y, and Miller GW
- Subjects
- Microbial Sensitivity Tests, Aminoglycosides pharmacology, Fungicides, Industrial pharmacology, Fusarium drug effects, Plant Diseases microbiology, Strobilurins adverse effects, Triticum microbiology
- Abstract
K20 is a novel amphiphilic aminoglycoside capable of inhibiting many fungal species. K20's capabilities to inhibit Fusarium graminearum the causal agent wheat Fusarium head blight (FHB) and to this disease were examined. K20 inhibited the growth of F. graminearum (minimum inhibitory concentrations, 7.8-15.6 mg L
-1 ) and exhibited synergistic activity when combined with triazole and strobilurin fungicides. Application of K20 up to 720 mg L-1 to wheat heads in the greenhouse showed no phytotoxic effects. Spraying wheat heads in the greenhouse with K20 alone at 360 mg L-1 lowered FHB severity below controls while combining K20 with half-label rates of Headline (pyraclostrobin) improved its disease control efficacy. In field trials, spraying K20 at 180 mg L-1 and 360 mg L-1 combined with half-label rates of Headline, Proline 480 SC (prothioconazole), Prosaro 421 SC (prothioconazole + tebuconazole), and Caramba (metconazole) reduced FHB indices synergistically. In addition, the K20 plus Proline 480 SC combination reduced levels of the mycotoxin deoxinivalenol by 75 % compared to the control. These data suggest that K20 may be useful as a fungicide against plant diseases such as FHB particularly when combined with commercial fungicides applied at below recommended rates., (Copyright © 2017 British Mycological Society. Published by Elsevier Ltd. All rights reserved.)- Published
- 2018
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15. The second International Symposium on Fungal Stress: ISFUS.
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Alder-Rangel A, Bailão AM, da Cunha AF, Soares CMA, Wang C, Bonatto D, Dadachova E, Hakalehto E, Eleutherio ECA, Fernandes ÉKK, Gadd GM, Braus GH, Braga GUL, Goldman GH, Malavazi I, Hallsworth JE, Takemoto JY, Fuller KK, Selbmann L, Corrochano LM, von Zeska Kress MR, Bertolini MC, Schmoll M, Pedrini N, Loera O, Finlay RD, Peralta RM, and Rangel DEN
- Subjects
- Brazil, Environmental Microbiology, Industrial Microbiology, Mycology, Fungi pathogenicity, Fungi physiology, Stress, Physiological
- Abstract
The topic of 'fungal stress' is central to many important disciplines, including medical mycology, chronobiology, plant and insect pathology, industrial microbiology, material sciences, and astrobiology. The International Symposium on Fungal Stress (ISFUS) brought together researchers, who study fungal stress in a variety of fields. The second ISFUS was held in May 8-11 2017 in Goiania, Goiás, Brazil and hosted by the Instituto de Patologia Tropical e Saúde Pública at the Universidade Federal de Goiás. It was supported by grants from CAPES and FAPEG. Twenty-seven speakers from 15 countries presented their research related to fungal stress biology. The Symposium was divided into seven topics: 1. Fungal biology in extreme environments; 2. Stress mechanisms and responses in fungi: molecular biology, biochemistry, biophysics, and cellular biology; 3. Fungal photobiology in the context of stress; 4. Role of stress in fungal pathogenesis; 5. Fungal stress and bioremediation; 6. Fungal stress in agriculture and forestry; and 7. Fungal stress in industrial applications. This article provides an overview of the science presented and discussed at ISFUS-2017., (Copyright © 2017 British Mycological Society. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2018
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16. Antifungal amphiphilic kanamycins: new life for an old drug.
- Author
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Subedi YP, AlFindee MN, Takemoto JY, and Chang CT
- Abstract
Classical aminoglycoside antibiotics are obsolete or hampered by the emergence of drug resistant bacteria. Recent discoveries of antifungal amphiphilic kanamycins offer new strategies for reviving and repurposing these old drugs. A simple structural modification turns the clinically obsolete antibacterial kanamycin into an antifungal agent. Structure-activity relationship studies have led to the production of K20 , an antifungal kanamycin that can be mass-produced for uses in agriculture as well as in animals. This review delineates the path to the discovery of K20 and other related antifungal amphiphilic kanamycins, determination of its mode of action, and findings in greenhouse and field trials with K20 that could lead to crop disease protection strategies.
- Published
- 2018
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17. One-step synthesis of carbohydrate esters as antibacterial and antifungal agents.
- Author
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AlFindee MN, Zhang Q, Subedi YP, Shrestha JP, Kawasaki Y, Grilley M, Takemoto JY, and Chang CT
- Subjects
- Animals, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents toxicity, Antifungal Agents pharmacology, Antifungal Agents toxicity, Candida albicans drug effects, Cell Line, Tumor, Cell Survival drug effects, Escherichia coli drug effects, Esters pharmacology, Esters toxicity, Fusarium drug effects, Humans, Methicillin-Resistant Staphylococcus aureus drug effects, Microbial Sensitivity Tests, Staphylococcus aureus drug effects, Structure-Activity Relationship, Anti-Bacterial Agents chemical synthesis, Antifungal Agents chemical synthesis, Bacteria drug effects, Carbohydrates chemistry, Esters chemistry, Fungi drug effects
- Abstract
Carbohydrate esters are biodegradable, and the degraded adducts are naturally occurring carbohydrates and fatty acids which are environmentally friendly and non-toxic to human. A simple one-step regioselective acylation of mono-carbohydrates has been developed that leads to the synthesis of a wide range of carbohydrate esters. Screening of these acylated carbohydrates revealed that several compounds were active against a panel of bacteria and fungi, including Staphylococcus aureus, methicillin-resistant S. aureus (MRSA), Candida albicans, Cryptococcus neoformans, Aspergillus flavus and Fusarium graminearum. Unlike prior studies on carbohydrate esters that focus only on antibacterial applications, our compounds are found to be active against both bacteria and fungi. Furthermore, the synthetic methodology is suitable to scale-up production for a variety of acylated carbohydrates. The identified lead compound, MAN014, can be used as an antimicrobial in applications such as food processing and preservation and for treatment of bacterial and fungal diseases in animals and plants., (Copyright © 2017 Elsevier Ltd. All rights reserved.)
- Published
- 2018
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18. Synthesis and bioactivity investigation of quinone-based dimeric cationic triazolium amphiphiles selective against resistant fungal and bacterial pathogens.
- Author
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Shrestha JP, Baker C, Kawasaki Y, Subedi YP, Vincent de Paul NN, Takemoto JY, and Chang CT
- Subjects
- Anti-Bacterial Agents pharmacology, Antifungal Agents pharmacology, Azoles, Benzoquinones chemistry, Cell Line, Tumor, Drug Design, Drug Resistance, Bacterial drug effects, Drug Resistance, Fungal drug effects, Humans, Sensitivity and Specificity, Surface-Active Agents pharmacology, Triazoles pharmacology, Anti-Bacterial Agents chemical synthesis, Antifungal Agents chemical synthesis, Surface-Active Agents chemical synthesis, Triazoles chemical synthesis
- Abstract
A series of synthetic dimeric cationic anthraquinone analogs (CAAs) with potent antimicrobial activities against a broad range of fungi and bacteria were developed. These compounds were prepared in 2-3 steps with high overall yield and possess alkyl chain, azole, quinone, and quaternary ammonium complexes (QACs). In vitro biological evaluations reveal prominent inhibitory activities of lead compounds against several drug-susceptible and drug-resistant fungal and bacterial strains, including MRSA, VRE, Candida albicans and Aspergillus flavus. Mode of action investigation reveals that the synthesized dimeric CAA's can disrupt the membrane integrity of fungi. Computational studies reveal possible designs that can revive the activity of QACs against drug-resistant bacteria. Cytotoxicity assays in SKOV-3, a cancer cell line, show that the lead compounds are selectively toxic to fungi and bacteria over human cells., (Copyright © 2016 Elsevier Masson SAS. All rights reserved.)
- Published
- 2017
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19. Divergent Synthesis of Three Classes of Antifungal Amphiphilic Kanamycin Derivatives.
- Author
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Zhang Q, Alfindee MN, Shrestha JP, Nziko VP, Kawasaki Y, Peng X, Takemoto JY, and Chang CT
- Subjects
- Anti-Bacterial Agents chemistry, Anti-Bacterial Agents pharmacology, Antifungal Agents pharmacology, Aspergillus flavus drug effects, Carbohydrate Conformation, Carbohydrate Sequence, Carbon-13 Magnetic Resonance Spectroscopy, Escherichia coli drug effects, Fusarium drug effects, Kanamycin chemistry, Kanamycin pharmacology, Microbial Sensitivity Tests, Proton Magnetic Resonance Spectroscopy, Spectrometry, Mass, Electrospray Ionization, Staphylococcus aureus drug effects, Antifungal Agents chemistry, Kanamycin analogs & derivatives
- Abstract
A concise and novel method for site-selective alkylation of 1,3,6',3″-tetraazidokanamycin has been developed that leads to the divergent synthesis of three classes of kanamycin A derivatives. These new amphiphilic kanamycin derivatives bearing alkyl chains length of 4, 6, 7, 8, 9, 10, 12, 14, and 16 have been tested for their antibacterial and antifungal activities. The antibacterial effect of the synthesized kanamycin derivatives declines or disappears as compared to the original kanamycin A. Several compounds, especially those with octyl chain at O-4″ and/or O-6″ positions on the ring III of kanamycin A, show very strong activity as antifungal agents. In addition, these compounds display no toxicity toward mammalian cells. Finally, computational calculation has revealed possible factors that are responsible for the observed regioselectivity. The simplicity in chemical synthesis and the fungal specific property make the lead compounds ideal candidates for the development of novel antifungal agents.
- Published
- 2016
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20. In vitro antifungal synergy between amphiphilic aminoglycoside K20 and azoles against Candida species and Cryptococcus neoformans.
- Author
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Shrestha SK, Grilley M, Anderson T, Dhiman C, Oblad J, Chang CW, Sorensen KN, and Takemoto JY
- Subjects
- Candida growth & development, Cryptococcus neoformans growth & development, Humans, Microbial Sensitivity Tests, Aminoglycosides pharmacology, Antifungal Agents pharmacology, Azoles pharmacology, Candida drug effects, Cryptococcus neoformans drug effects, Drug Synergism
- Abstract
Several azoles are widely used to treat human fungal infections. Increasing resistance to these azoles has prompted exploration of their synergistic antifungal activities when combined with other agents. The amphiphilic aminoglycoside, K20, was recently shown to inhibit filamentous fungi, yeasts and heterokonts, but not bacteria. In this study, in vitro synergistic growth inhibition by combinations of K20 and azoles (fluconazole, itraconazole, voriconazole, clotrimazole, or posaconazole) were examined against Candida species and Cryptococcus neoformans. Checkerboard microbroth dilution, time-kill curve, and disk diffusion assays revealed that K20 has synergistic inhibitory activities with all five azoles against C. albicans including azole-resistant C. albicans strains ATCC 64124 and ATCC 10231. Four (fluconazole, itraconazole, clotrimazole, posaconazole) and three (fluconazole, itraconazole, voriconazole) azoles were synergistically inhibitory with K20 against C. lusitaniae and C. tropicalis, respectively. Only posaconazole showed synergy with K20 against two Cryptococcus neoformans strains (90-26 and VR-54). Time-kill curves with azole-resistant C. albicans 64124 and azole-sensitive C. albicans MYA-2876 confirmed the K20-azole synergistic interactions with a ≥ 2 log10 decrease in colony-forming units (CFU)/ml compared with the corresponding azoles alone. These results suggest that combinations of K20 and azoles offer a possible strategy for developing therapies against candidiasis., (© The Author 2015. Published by Oxford University Press on behalf of The International Society for Human and Animal Mycology. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2015
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21. Structure-activity relationships for antibacterial to antifungal conversion of kanamycin to amphiphilic analogues.
- Author
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Fosso M, AlFindee MN, Zhang Q, Nziko Vde P, Kawasaki Y, Shrestha SK, Bearss J, Gregory R, Takemoto JY, and Chang CW
- Subjects
- Anti-Bacterial Agents chemistry, Antifungal Agents chemistry, Carbohydrate Conformation, Carbohydrate Sequence, Drug Discovery, Molecular Sequence Data, Structure-Activity Relationship, Surface-Active Agents chemistry, Anti-Bacterial Agents chemical synthesis, Antifungal Agents chemical synthesis, Kanamycin chemistry, Surface-Active Agents chemical synthesis
- Abstract
Novel fungicides are urgently needed. It was recently reported that the attachment of an octyl group at the O-4″ position of kanamycin B converts this antibacterial aminoglycoside into a novel antifungal agent. To elucidate the structure-activity relationship (SAR) for this phenomenon, a lead compound FG03 with a hydroxyl group replacing the 3″-NH2 group of kanamycin B was synthesized. FG03's antifungal activity and synthetic scheme inspired the synthesis of a library of kanamycin B analogues alkylated at various hydroxyl groups. SAR studies of the library revealed that for antifungal activity the O-4″ position is the optimal site for attaching a linear alkyl chain and that the 3″-NH2 and 6″-OH groups of the kanamycin B parent molecule are not essential for antifungal activity. The discovery of lead compound, FG03, is an example of reviving clinically obsolete drugs like kanamycin by simple chemical modification and an alternative strategy for discovering novel antimicrobials.
- Published
- 2015
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22. Three enzymes involved in the N-methylation and incorporation of the pradimicin sugar moieties.
- Author
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Napan KL, Zhang S, Anderson T, Takemoto JY, and Zhan J
- Subjects
- Actinobacteria chemistry, Actinobacteria enzymology, Actinobacteria metabolism, Anthracyclines chemistry, Glycosylation, Glycosyltransferases genetics, Glycosyltransferases metabolism, Methylation, Mutation, Recombination, Genetic, Anthracyclines metabolism
- Abstract
Pradimicins are antifungal and antiviral natural products from Actinomadura hibisca P157-2. The sugar moieties play a critical role in the biological activities of these compounds. There are two glycosyltransferase genes in the pradimicin biosynthetic gene cluster, pdmS and pdmQ, which are putatively responsible for the introduction of the sugar moieties during pradimicin biosynthesis. In this study, we disrupted these two genes using a double crossover approach. Disruption of pdmS led to the production of pradimicinone I, the aglycon of pradimicin A, which confirmed that PdmS is the O-glycosyltransferase responsible for the first glycosylation step and attaching the 4',6'-dideoxy-4'-amino-d-galactose or 4',6'-dideoxy-4'-methylamino-d-galactose moiety to the 5-OH. Disruption of pdmQ resulted in the production of pradimicin B, indicating that this enzyme is the second glycosyltransferase that introduces the d-xylose moiety to the 3'-OH of the first sugar moiety. Insertion of an integrative plasmid before pdmO might have interfered with the dedicated promoter, yielding a mutant that produces pradimicin C as the major metabolite, which suggested that PdmO is the enzyme that specifically methylates the 4'-NH2 of the 4',6'-dideoxy-4'-amino-d-galactose moiety. Functional characterization of these sugar-decorating and -incorporating enzymes thus facilitates the understanding of the pradimicin biosynthetic pathway., (Copyright © 2015 Elsevier Ltd. All rights reserved.)
- Published
- 2015
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23. Antifungal amphiphilic aminoglycoside K20: bioactivities and mechanism of action.
- Author
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Shrestha SK, Chang CW, Meissner N, Oblad J, Shrestha JP, Sorensen KN, Grilley MM, and Takemoto JY
- Abstract
K20 is a novel amphiphilic antifungal aminoglycoside that is synthetically derived from the antibiotic kanamycin A. Reported here are investigations of K20's antimicrobial activities, cytotoxicity, and fungicidal mechanism of action. In vitro growth inhibitory activities against a variety of human and plant pathogenic yeasts, filamentous fungi, and bacteria were determined using microbroth dilution assays and time-kill curve analyses, and hemolytic and animal cell cytotoxic activities were determined. Effects on Cryptococcus neoformans H-99 infectivity were determined with a preventive murine lung infection model. The antifungal mechanism of action was studied using intact fungal cells, yeast lipid mutants, and small unilamellar lipid vesicles. K20 exhibited broad-spectrum in vitro antifungal activities but not antibacterial activities. Pulmonary, single dose-administration of K20 reduced C. neoformans lung infection rates 4-fold compared to controls. Hemolysis and half-maximal cytotoxicities of mammalian cells occurred at concentrations that were 10 to 32-fold higher than fungicidal MICs. With fluorescein isothiocyanate (FITC), 20-25 mg/L K20 caused staining of >95% of C. neoformans and Fusarium graminearum cells and at 31.3 mg/L caused rapid leakage (30-80% in 15 min) of calcein from preloaded small unilamellar lipid vesicles. K20 appears to be a broad-spectrum fungicide, capable of reducing the infectivity of C. neoformans, and exhibits low hemolytic activity and mammalian cell toxicity. It perturbs the plasma membrane by mechanisms that are lipid modulated. K20 is a novel amphiphilic aminoglycoside amenable to scalable production and a potential lead antifungal for therapeutic and crop protection applications.
- Published
- 2014
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24. Synergistic actions of tailoring enzymes in pradimicin biosynthesis.
- Author
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Napan K, Zhang S, Morgan W, Anderson T, Takemoto JY, and Zhan J
- Subjects
- Anthracyclines chemistry, Molecular Conformation, Anthracyclines metabolism, Cytochrome P-450 Enzyme System metabolism
- Abstract
Three key tailoring enzymes in pradimicin biosynthesis: PdmJ, PdmW, and PdmN, were investigated. PdmW was characterized as the C-6 hydroxylase by structural characterization of the corresponding product, 6-hydroxy-G-2A. The efficiencies of the C-5 and C-6 hydroxylations, catalyzed respectively by PdmJ and PdmW, were low when they were expressed individually with the early biosynthetic enzymes that form G-2A. When these two cytochrome P450 enzymes were co-expressed, a dihydroxylated product, 5,6-dihydroxy-G-2A, was efficiently produced, indicating that these two enzymes work synergistically in pradimicin biosynthesis. Heterologously expressed PdmN in Streptomyces coelicolor CH999 converted G-2A to JX137a by ligating a unit of D-alanine to the carboxyl group. PdmN has relaxed substrate specificity toward both amino acid donors and acceptors. Through combinatorial biosynthesis, a series of new pradimicin analogues were produced., (© 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2014
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25. Production of destruxins from Metarhizium spp. fungi in artificial medium and in endophytically colonized cowpea plants.
- Author
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Golo PS, Gardner DR, Grilley MM, Takemoto JY, Krasnoff SB, Pires MS, Fernandes ÉK, Bittencourt VR, and Roberts DW
- Subjects
- Animals, Depsipeptides analysis, Fabaceae chemistry, Fabaceae physiology, Fungal Proteins analysis, Mycotoxins analysis, Depsipeptides metabolism, Fabaceae microbiology, Fungal Proteins metabolism, Insecta microbiology, Metarhizium physiology, Mycotoxins metabolism
- Abstract
Destruxins (DTXs) are cyclic depsipeptides produced by many Metarhizium isolates that have long been assumed to contribute to virulence of these entomopathogenic fungi. We evaluated the virulence of 20 Metarhizium isolates against insect larvae and measured the concentration of DTXs A, B, and E produced by these same isolates in submerged (shaken) cultures. Eight of the isolates (ARSEF 324, 724, 760, 1448, 1882, 1883, 3479, and 3918) did not produce DTXs A, B, or E during the five days of submerged culture. DTXs were first detected in culture medium at 2-3 days in submerged culture. Galleria mellonella and Tenebrio molitor showed considerable variation in their susceptibility to the Metarhizium isolates. The concentration of DTXs produced in vitro did not correlate with percent or speed of insect kill. We established endophytic associations of M. robertsii and M. acridum isolates in Vigna unguiculata (cowpeas) and Cucumis sativus (cucumber) plants. DTXs were detected in cowpeas colonized by M. robertsii ARSEF 2575 12 days after fungal inoculation, but DTXs were not detected in cucumber. This is the first instance of DTXs detected in plants endophytically colonized by M. robertsii. This finding has implications for new approaches to fungus-based biological control of pest arthropods.
- Published
- 2014
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26. Antifungal Amphiphilic Aminoglycosides.
- Author
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Chang CW and Takemoto JY
- Abstract
The attachment of alkyl and other hydrophobic groups to traditional antibacterial kanamycins and neomycins creates amphiphilic aminoglycosides with altered antimicrobial properties. In this review, we summarize the discovery of amphiphilic kanamycins that are antifungal, but not antibacterial, and that inhibit the growth of fungi by perturbation of plasma membrane functions. With low toxicities against plant and mammalian cells, they appear to specifically target the fungal plasma membrane. These new antifungal agents offer new options for fighting fungal pathogens and are examples of reviving old drugs to confront new therapeutic challenges.
- Published
- 2014
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27. Membrane lipid-modulated mechanism of action and non-cytotoxicity of novel fungicide aminoglycoside FG08.
- Author
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Shrestha S, Grilley M, Fosso MY, Chang CW, and Takemoto JY
- Subjects
- Aminoglycosides chemistry, Aminoglycosides toxicity, Animals, Antifungal Agents chemistry, Antifungal Agents toxicity, Cell Line, Tumor, Cell Membrane chemistry, Cell Membrane drug effects, Cell Membrane metabolism, Coated Vesicles metabolism, Dose-Response Relationship, Drug, Fluoresceins metabolism, Fluorescent Dyes metabolism, Mice, Microbial Sensitivity Tests, Mutation, NIH 3T3 Cells, Potassium metabolism, Saccharomyces cerevisiae drug effects, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae metabolism, Sphingolipids biosynthesis, Trisaccharides chemistry, Trisaccharides toxicity, Aminoglycosides pharmacology, Antifungal Agents pharmacology, Membrane Lipids metabolism, Trisaccharides pharmacology
- Abstract
A novel aminoglycoside, FG08, that differs from kanamycin B only by a C8 alkyl chain at the 4″-O position, was previously reported. Unlike kanamycin B, FG08 shows broad-spectrum fungicidal but not anti-bacterial activities. To understand its specificity for fungi, the mechanism of action of FG08 was studied using intact cells of the yeast Saccharomyces cerevisiae and small unilamellar membrane vesicles. With exposure to FG08 (30 µg mL(-1)), 8-fold more cells were stained with fluorescein isothiocyanate, cells had 4 to 6-fold higher K(+) efflux rates, and 18-fold more cells were stained with SYTOX Green in comparison to exposure to kanamycin B (30 µg mL(-1)). Yeast mutants with aberrant membrane sphingolipids (no sphingoid base C4 hydroxyl group, truncated very long fatty acid chain, or lacking the terminal phosphorylinositol group of mannosyl-diinositolphosphorylphytoceramide were 4 to 8-fold less susceptible to growth inhibition with FG08 and showed 2 to 10-fold lower SYTOX Green dye uptake rates than did the isogenic wild-type strain. FG08 caused leakage of pre-loaded calcein from 50% of small unilamellar vesicles with glycerophospholipid and sterol compositions that mimic the compositions of fungal plasma membranes. Less than 5 and 10% of vesicles with glycerophospholipid and sterol compositions that mimic bacterial and mammalian cell plasma membranes, respectively, showed calcein leakage. In tetrazolium dye cytotoxicity tests, mammalian cell lines NIH3T3 and C8161.9 showed FG08 toxicity at concentrations that were 10 to 20-fold higher than fungicidal minimal inhibitory concentrations. It is concluded that FG08's growth inhibitory specificity for fungi lie in plasma membrane permeability changes involving mechanisms that are modulated by membrane lipid composition.
- Published
- 2013
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28. Mesobiliverdin IXα Enhances Rat Pancreatic Islet Yield and Function.
- Author
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Ito T, Chen D, Chang CW, Kenmochi T, Saito T, Suzuki S, and Takemoto JY
- Abstract
The aims of this study were to produce mesobiliverdin IXα, an analog of anti-inflammatory biliverdin IXα, and to test its ability to enhance rat pancreatic islet yield for allograft transplantation into diabetic recipients. Mesobiliverdin IXα was synthesized from phycocyanobilin derived from cyanobacteria, and its identity and purity were analyzed by chromatographic and spectroscopic methods. Mesobiliverdin IXα was a substrate for human NADPH biliverdin reductase. Excised Lewis rat pancreata infused with mesobiliverdin IXα and biliverdin IXα-HCl (1-100 μM) yielded islet equivalents as high as 86.7 and 36.5%, respectively, above those from non-treated controls, and the islets showed a high degree of viability based on dithizone staining. When transplanted into livers of streptozotocin-induced diabetic rats, islets from pancreata infused with mesobiliverdin IXα lowered non-fasting blood glucose (BG) levels in 55.6% of the recipients and in 22.2% of control recipients. In intravenous glucose tolerance tests, fasting BG levels of 56 post-operative day recipients with islets from mesobiliverdin IXα infused pancreata were lower than those for controls and showed responses that indicate recovery of insulin-dependent function. In conclusion, mesobiliverdin IXα infusion of pancreata enhanced yields of functional islets capable of reversing insulin dysfunction in diabetic recipients. Since its production is scalable, mesobiliverdin IXα has clinical potential as a protectant of pancreatic islets for allograft transplantation.
- Published
- 2013
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29. Scalable production of biliverdin IXα by Escherichia coli.
- Author
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Chen D, Brown JD, Kawasaki Y, Bommer J, and Takemoto JY
- Subjects
- Batch Cell Culture Techniques, Biliverdine genetics, Bioreactors, Heme Oxygenase (Decyclizing) genetics, Oxidoreductases Acting on CH-CH Group Donors genetics, Oxidoreductases Acting on CH-CH Group Donors metabolism, Biliverdine biosynthesis, Escherichia coli metabolism
- Abstract
Background: Biliverdin IXα is produced when heme undergoes reductive ring cleavage at the α-methene bridge catalyzed by heme oxygenase. It is subsequently reduced by biliverdin reductase to bilirubin IXα which is a potent endogenous antioxidant. Biliverdin IXα, through interaction with biliverdin reductase, also initiates signaling pathways leading to anti-inflammatory responses and suppression of cellular pro-inflammatory events. The use of biliverdin IXα as a cytoprotective therapeutic has been suggested, but its clinical development and use is currently limited by insufficient quantity, uncertain purity, and derivation from mammalian materials. To address these limitations, methods to produce, recover and purify biliverdin IXα from bacterial cultures of Escherichia coli were investigated and developed., Results: Recombinant E. coli strains BL21(HO1) and BL21(mHO1) expressing cyanobacterial heme oxygenase gene ho1 and a sequence modified version (mho1) optimized for E. coli expression, respectively, were constructed and shown to produce biliverdin IXα in batch and fed-batch bioreactor cultures. Strain BL21(mHO1) produced roughly twice the amount of biliverdin IXα than did strain BL21(HO1). Lactose either alone or in combination with glycerol supported consistent biliverdin IXα production by strain BL21(mHO1) (up to an average of 23. 5mg L(-1) culture) in fed-batch mode and production by strain BL21 (HO1) in batch-mode was scalable to 100L bioreactor culture volumes. Synthesis of the modified ho1 gene protein product was determined, and identity of the enzyme reaction product as biliverdin IXα was confirmed by spectroscopic and chromatographic analyses and its ability to serve as a substrate for human biliverdin reductase A., Conclusions: Methods for the scalable production, recovery, and purification of biliverdin IXα by E. coli were developed based on expression of a cyanobacterial ho1 gene. The purity of the produced biliverdin IXα and its ability to serve as substrate for human biliverdin reductase A suggest its potential as a clinically useful therapeutic.
- Published
- 2012
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30. Probing DNA-lipid membrane interactions with a lipopeptide nanopore.
- Author
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Bessonov A, Takemoto JY, and Simmel FC
- Subjects
- Cell Membrane chemistry, DNA chemistry, Electric Conductivity, Lipid Bilayers chemistry, Lipid Bilayers metabolism, Lipopeptides chemistry, Nucleic Acid Hybridization, Cell Membrane metabolism, DNA metabolism, Lipopeptides metabolism, Nanopores, Nanotechnology methods
- Abstract
Association of DNA molecules with lipid bilayer membranes is of considerable interest for a large variety of applications in biotechnology. Here we introduce syringomycin E (SRE), a small pore-forming lipopeptide produced by the bacterium Pseudomonas syringae, as a facile sensor for the detection of DNA interactions with lipid membranes. SRE forms highly reproducible pores in cellular and artificial membranes. The pore structure involves bilayer lipids, which have a pronounced influence on open channel conductance and gating. SRE channels act as ionic diodes that serve as current rectifiers sensitive to the charge of the bilayer. We employ this intrinsic property to electronically monitor the association of DNA molecules with the membrane in a variety of different settings. We show that SRE can be used for quantitatively probing electrostatic interactions of DNA and DNA-cholesterol conjugates with a lipid membrane. Furthermore, we demonstrate that SRE channels allow monitoring of hybridization reactions between lipid-anchored probe strands and complementary strands in solution. In the presence of double-stranded DNA, SRE channels display a particularly high degree of rectification. Finally, the formation of multilayered structures assembled from poly-(L)-lysine and DNA oligonucleotides on the membrane was precisely monitored with SRE.
- Published
- 2012
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31. A key cytochrome P450 hydroxylase in pradimicin biosynthesis.
- Author
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Napan KL, Zeng J, Takemoto JY, and Zhan J
- Subjects
- Amino Acid Sequence, Chemistry, Pharmaceutical methods, Chromatography, High Pressure Liquid, Chromatography, Liquid methods, Cytochrome P-450 Enzyme System metabolism, Dose-Response Relationship, Drug, Drug Design, Escherichia coli enzymology, Kinetics, Mass Spectrometry methods, Models, Chemical, Molecular Sequence Data, Polyketides chemistry, Sequence Homology, Amino Acid, Substrate Specificity, Anthracyclines chemistry, Cytochrome P-450 Enzyme System chemistry, Cytochrome P-450 Enzyme System physiology
- Abstract
Pradimicins A-C (1-3) are a group of antifungal and antiviral polyketides from Actinomadura hibisca. The sugar moieties in pradimicins are required for their biological activities. Consequently, the 5-OH that is used for glycosylation plays a critical role in pradimicin biosynthesis. A cytochrome P450 monooxygenase gene, pdmJ, was amplified from the genomic DNA of A. hibisca and expressed in Escherichia coli BL21(DE3). PdmJ introduced a hydroxyl group to G-2A (4), a key pradimicin biosynthetic intermediate, at C-5 to form JX134 (5). A d-Ala-containing pradimicin analog, JX137a (6) was tested as an alternative substrate, but no product was detected by LC-MS, indicating that PdmJ has strict substrate specificity. Kinetic studies revealed a typical substrate inhibition of PdmJ activity. The optimal substrate concentration for the highest velocity is 115μM under the test conditions. Moreover, the conversion rate of 4 to 5 was reduced by the presence of 6, likely due to competitive inhibition. Coexpression of PdmJ and a glucose 1-dehydrogenase in E. coli BL21(DE3) provides an efficient method to produce the important intermediate 5 from 4., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2012
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32. Fungicidal Activities and Mechanisms of Action of Pseudomonas syringae pv. syringae Lipodepsipeptide Syringopeptins 22A and 25A.
- Author
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Bensaci MF, Gurnev PA, Bezrukov SM, and Takemoto JY
- Abstract
The plant-associated bacterium Pseudomonas syringae pv. syringae simultaneously produces two classes of metabolites: the small cyclic lipodepsinonapeptides such as the syringomycins and the larger cyclic lipodepsipeptide syringopeptins SP22 or SP25. The syringomycins inhibit a broad spectrum of fungi (but particularly yeasts) by lipid-dependent membrane interaction. The syringopeptins are phytotoxic and inhibitory to Gram-positive bacteria. In this study, the fungicidal activities of two major syringopeptins, SP22A and SP25A, and their mechanisms of action were investigated and compared to those of syringomycin E. SP22A and SP25A were observed to inhibit the fungal yeasts Saccharomyces cerevisiae and Candida albicans although less effectively than syringomycin E. S. cerevisiae mutants defective in ergosterol and sphingolipid biosyntheses were less susceptible to SP22A and SP25A but the relative inhibitory capabilities of SRE vs. SP22A and SP25A were maintained. Similar differences were observed for capabilities to cause cellular K(+) and Ca(2+) fluxes in S. cerevisiae. Interestingly, in phospholipid bilayers the syringopeptins are found to induce larger macroscopic ionic conductances than syringomycin E but form single channels with similar properties. These findings suggest that the syringopeptins target the yeast plasma membrane, and, like syringomycin E, employ a lipid-dependent channel-forming mechanism of action. The differing degrees of growth inhibition by these lipodepsipeptides may be explained by differences in their hydrophobicities. The more hydrophobic SP22A and SP25A might interact more strongly with the yeast cell wall that would create a selective barrier for their incorporation into the plasma membrane.
- Published
- 2011
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33. Antibacterial to antifungal conversion of neamine aminoglycosides through alkyl modification. Strategy for reviving old drugs into agrofungicides.
- Author
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Chang CW, Fosso M, Kawasaki Y, Shrestha S, Bensaci MF, Wang J, Evans CK, and Takemoto JY
- Subjects
- Aminoglycosides chemistry, Aminoglycosides toxicity, Anti-Bacterial Agents chemistry, Antifungal Agents chemistry, Antifungal Agents toxicity, Cell Membrane drug effects, Crops, Agricultural microbiology, Fungicides, Industrial chemistry, Fungicides, Industrial pharmacology, Fungicides, Industrial toxicity, Kanamycin pharmacology, Plant Diseases microbiology, Plant Leaves, Trisaccharides chemistry, Trisaccharides toxicity, Triticum microbiology, Aminoglycosides pharmacology, Anti-Bacterial Agents pharmacology, Antifungal Agents pharmacology, Fusarium drug effects, Kanamycin analogs & derivatives, Trisaccharides pharmacology
- Abstract
Many Actinomycetes aminoglycosides are widely used antibiotics. Although mainly antibacterials, a few known aminoglycosides also inhibit yeasts, protozoans and important crop pathogenic fungal oomycetes. Here we show that attachment of a C8 alkyl chain to ring III of a neamine-based aminoglycoside specifically at the 4″-o position yields a broad-spectrum fungicide (FG08) without the antibacterial properties typical for aminoglycosides. Leaf infection assays and greenhouse studies show that FG08 is capable of suppressing wheat fungal infections by Fusarium graminearum-the causative agent of Fusarium head blight-at concentrations that are minimally phytotoxic. Unlike typical aminoglycoside action of ribosomal protein translation miscoding, FG08's antifungal action involves perturbation of the plasma membrane. This antibacterial to antifungal transformation could pave the way for the development of a new class of aminoglycoside-based fungicides suitable for use in crop disease applications. In addition, this strategy is an example of reviving a clinically obsolete drug by simple chemical modification to yield a new application.
- Published
- 2010
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34. Synthesis and combinational antibacterial study of 5''-modified neomycin.
- Author
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Zhang J, Keller K, Takemoto JY, Bensaci M, Litke A, Czyryca PG, and Chang CW
- Subjects
- Drug Synergism, Drug Therapy, Combination, Enterococcus drug effects, Humans, Methicillin-Resistant Staphylococcus aureus drug effects, Microbial Sensitivity Tests, Molecular Conformation, Structure-Activity Relationship, Vancomycin Resistance, Anti-Bacterial Agents chemical synthesis, Anti-Bacterial Agents chemistry, Anti-Bacterial Agents pharmacology, Gram-Negative Bacteria drug effects, Gram-Positive Bacteria drug effects, Neomycin analogs & derivatives, Neomycin chemical synthesis, Neomycin chemistry, Neomycin pharmacology
- Abstract
A library of 5''-modified neomycin derivatives were synthesized for an antibacterial structure-activity optimization strategy. Two leads exhibited prominent activity against both methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant enterococci (VRE). Antibacterial activities were measured when combined with other clinically used antibiotics. Significant synergistic activities were observed, which may lead to the development of novel therapeutic practices in the battle against infectious bacteria.
- Published
- 2009
- Full Text
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35. Altering the activity of syringomycin E via the membrane dipole potential.
- Author
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Ostroumova OS, Malev VV, Bessonov AN, Takemoto JY, and Schagina LV
- Subjects
- Antifungal Agents pharmacology, Cell Membrane Permeability drug effects, Electrophysiology, Lipid Bilayers, Membrane Potentials physiology, Peptides, Cyclic pharmacology
- Abstract
The membrane dipole potential is responsible for the modulation of numerous biological processes. It was previously shown (Ostroumova, O. S.; Kaulin, Y. A.; Gurnev, P. A.; Schagina, L. V. Langmuir 2007, 23, 6889-6892) that variations in the dipole potential lead to changes in the channel properties of the antifungal lipodepsipeptide syringomycin E (SRE). Here, data are presented demonstrating the effect of the membrane dipole potential on the channel-forming activity of SRE. A rise in the dipole potential is accompanied by both an increase in the minimum SRE concentration required for the detection of single channels at fixed voltage and a decrease in the steady-state number of open SRE channels at a given SRE concentration and voltage. These alterations are determined by several factors: gating charge, connected with translocations of lipid and SRE dipoles during channel formation, the bilayer-water solution partitioning of SRE, and the chemical work related to conformational changes during channel formation.
- Published
- 2008
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36. Syringopeptin SP25A-mediated killing of gram-positive bacteria and the role of teichoic acid d-alanylation.
- Author
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Bensaci MF and Takemoto JY
- Subjects
- Amino Acid Sequence, Gram-Positive Bacteria genetics, Gram-Positive Bacteria growth & development, Humans, Microbial Sensitivity Tests, Molecular Sequence Data, Peptides, Cyclic chemistry, Peptides, Cyclic isolation & purification, Alanine metabolism, Bacterial Toxins pharmacology, Gram-Positive Bacteria drug effects, Peptides, Cyclic pharmacology, Teichoic Acids metabolism
- Abstract
The Pseudomonas syringae syringopeptins are cationic cyclic lipodepsipeptides that inhibit fungi and bacteria. The homolog syringopeptin (SP)25A was strongly inhibitory to several Gram-positive bacteria with minimum inhibitory concentrations ranging between 1.95 and 7.8 microg mL(-1). In contrast, it was not inhibitory to several Gram-negative bacteria. At 5 and 10 microg mL(-1), SP25A rapidly inhibited the growth of Bacillus subtilis and was bacteriocidal. Teichoic acid D-alanylation dltB- and dltD-defective mutant strains of B. subtilis were more susceptible to SP25A compared with the parental wild-type strain. The degree of susceptibility of the parent strain, but not the dltB and dltD mutant strains, increased at alkaline pH (9.0). In contrast, the parental and mutant strains had the same susceptibilities to syringopeptins SP22A and SP508A at pH 7.0 and 9.0. These results suggest that the cell wall anionic teichoic acids modulate SP25A action against B. subtilis, and they provide an explanation for the selective inhibition of Gram-positive bacteria by SP25A.
- Published
- 2007
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37. Sonication-assisted library synthesis of oxazolidinone-carbohydrate conjugates.
- Author
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Zhang J, Chen HN, Chiang FI, Takemoto JY, Bensaci M, and Chang CW
- Subjects
- Anti-Infective Agents pharmacology, Carbohydrates pharmacology, Combinatorial Chemistry Techniques methods, Escherichia coli drug effects, Microbial Sensitivity Tests, Molecular Structure, Mycobacterium smegmatis drug effects, Oxazolidinones pharmacology, Rhodotorula drug effects, Sonication, Staphylococcus aureus drug effects, Anti-Infective Agents chemical synthesis, Carbohydrates chemical synthesis, Oxazolidinones chemical synthesis
- Published
- 2007
- Full Text
- View/download PDF
38. Actin and amphiphilic polymers influence on channel formation by Syringomycin E in lipid bilayers.
- Author
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Bessonov AN, Schagina LV, Takemoto JY, Gurnev PA, Kuznetsova IM, Turoverov KK, and Malev VV
- Subjects
- Computer Simulation, Hydrophobic and Hydrophilic Interactions, Membrane Potentials, Peptides, Cyclic, Actins chemistry, Ion Channels chemistry, Lipid Bilayers chemistry, Membrane Fluidity, Models, Chemical, Models, Molecular, Polymers chemistry
- Abstract
The bacterial lipodepsipeptide syringomycin E (SRE) added to one (cis-) side of bilayer lipid membrane forms voltage dependent ion channels. It was found that G-actin increased the SRE-induced membrane conductance due to formation of additional SRE-channels only in the case when actin and SRE were applied to opposite sides of a lipid bilayer. The time course of conductance relaxation depended on the sequence of SRE and actin addition, suggesting that actin binds to the lipid bilayer and binding is a limiting step for SRE-channel formation. G-actin adsorption on the membrane was irreversible. The amphiphilic polymers, Konig's polyanion (KP) and poly(Lys, Trp) (PLT) produced the actin-like effect. It was shown that the increase in the SRE membrane activity was due to hydrophobic interactions between the adsorbing molecules and membrane. Nevertheless, hydrophobic interactions were not sufficient for the increase of SRE channel-forming activity. The dependence of the number of SRE-channels on the concentration of adsorbing species gave an S-shaped curve indicating cooperative adsorption of the species. Kinetic analysis of SRE-channel number growth led to the conclusion that the actin, KP, and PLT molecules form aggregates (domains) on the trans-monolayer. It is suggested that an excess of SRE-channel formation occurs within the regions of the cis-monolayer adjacent to the domains of the adsorbed molecules, which increase the effective concentration of SRE-channel precursors.
- Published
- 2006
- Full Text
- View/download PDF
39. Novel cyclic lipodepsipeptide from Pseudomonas syringae pv. lachrymans strain 508 and syringopeptin antimicrobial activities.
- Author
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Grgurina I, Bensaci M, Pocsfalvi G, Mannina L, Cruciani O, Fiore A, Fogliano V, Sorensen KN, and Takemoto JY
- Subjects
- Microbial Sensitivity Tests, Peptides, Cyclic chemistry, Peptides, Cyclic genetics, Anti-Infective Agents pharmacology, Depsipeptides pharmacology, Lipoproteins pharmacology, Mycobacterium smegmatis drug effects, Peptides, Cyclic pharmacology, Pseudomonas syringae chemistry
- Abstract
The syringopeptins are a group of antimicrobial cyclic lipodepsipeptides produced by several plant-associated pseudomonads. A novel syringopeptin, SP508, was shown to be produced as two homologs (A and B) by Pseudomonas syringae pv. lachrymans strain 508 from apple and to structurally resemble syringopeptin SP22. SP508 differed from SP22 and other syringopeptins by having three instead of four alpha,beta-unsaturated amino acids and a longer beta-hydroxy acyl chain. Both SP508 and SP22 displayed growth-inhibitory activities against Mycobacterium smegmatis, other gram-positive bacteria, and yeasts but not against gram-negative bacteria. Structure-activity analyses of the SP508 and SP22 homologs indicated chemical structural features that lead to enhanced antimycobacterial activity by these pseudomonad cyclic lipodepsipeptides.
- Published
- 2005
- Full Text
- View/download PDF
40. Voltage-dependent synchronization of gating of syringomycin E ion channels.
- Author
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Ostroumova OS, Malev VV, Kaulin YA, Gurnev PA, Takemoto JY, and Schagina LV
- Subjects
- Membrane Potentials, Ion Channel Gating physiology, Ion Channels physiology, Peptides, Cyclic physiology
- Abstract
Antifungal lipodepsipeptide syringomycin E (SRE) forms two major conductive states in lipid bilayers: "small" and "large". Large SRE channels are cluster of several small ones, demonstrating synchronous opening and closure. To get insight into the mechanism of such synchronization we investigated how transmembrane potential, membrane surface charge, and ionic strength affect the number of small SRE channels synchronously functioning in the cluster. Here, we report that the large SRE channels can be presented as 3-8 simultaneously gating small channels. The increase in the absolute value of the transmembrane potential (from 50 to 200 mV) decreases the number of synchronously gated channels in the clusters. Voltage-dependence of channel synchronization was influenced by the ionic strength of the bathing solution, but not by membrane surface charge. We propose a mechanism for the voltage-dependent cluster behavior that involves a voltage-induced reorientation of lipid dipoles associated with the channel pores.
- Published
- 2005
- Full Text
- View/download PDF
41. Sphingolipids influence the sensitivity of lipid bilayers to fungicide, syringomycin E.
- Author
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Kaulin YA, Takemoto JY, Schagina LV, Ostroumova OS, Wangspa R, Teeter JH, and Brand JG
- Subjects
- Electric Conductivity, Fungicides, Industrial chemistry, Lipid Bilayers chemistry, Membrane Potentials, Peptides, Cyclic chemistry, Sphingolipids chemistry
- Abstract
Sphingolipids with long chain bases hydroxylated at the C4 position are a requisite for the yeast, Saccharomyces cerevisia, to be sensitive to the ion channel forming antifungal agent, syringomycin E (SRE). A mutant S. cerevisiae strain, Deltasyr2, having sphingolipids with a sphingoid base devoid of C4-hydroxylation, is resistant to SRE. To explore the mechanism of this resistance, we investigated the channel forming activity of SRE in lipid bilayers of varying composition. We found that the addition of sphingolipid-rich fraction from Deltasyr2 to the membrane-forming solution (DOPS/DOPE/ergosterol) resulted in lipid bilayers with lower sensitivity to SRE compared with those containing sphingolipid fraction from wild-type S. cerevisiae. Other conditions being equal, the rate of increase of bilayer conductance was about 40 times slower, and the number of SRE channels was about 40 times less, with membranes containing Deltasyr2 versus wild-type sphingolipids. Deltasyr2 sphingolipids altered neither SRE single channel conductance nor the gating charge but the ability of SRE channels to open synchronously was diminished. The results suggest that the resistance of the Deltasyr2 mutant to SRE may be partly due to the ability of sphingolipids without the C4 hydroxyl group to decrease the channel forming activity of SRE.
- Published
- 2005
- Full Text
- View/download PDF
42. [Kinetic parameters of single ion channels and stationary conductivities of phytotoxin modified lipid bilayers].
- Author
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Ostroumova OS, Gur'nev FA, Takemoto JY, Shchagina LV, and Malev VV
- Subjects
- Bacterial Toxins pharmacology, Electric Conductivity, Ion Channels metabolism, Kinetics, Lipid Bilayers chemical synthesis, Membrane Potentials, Peptides, Cyclic chemistry, Peptides, Cyclic pharmacology, Pseudomonas syringae metabolism, Ion Channels chemistry, Lipid Bilayers metabolism
- Abstract
As shown earlier, phytotoxins produced by Pseudomonas syringae pv. syringae form ion channels of "small" and "large" conductance when incorporated into planar lipid membranes. The multilevel conductance is due to cluster organization of the channels (Kaulin et al., 1998; Gurnev et al., 2002). In this study the kinetic parameters of syringomycin E (SRE) and syringostatin A (SSA) channels in negatively charged bilayer lipid membranes were estimated. The average time of open state of the small channels (t(s)(open)) did not depend on transmembrane voltage (in the range of +/- 200 mV). The channel characteristics differed between two phytotoxins: the t(s)(open) for the SRE-channels was much larger than that for SSA-channels. An energetic diagram with two non-conducting states illustrating the formation of the small channel is proposed to explain the voltage independence of the kinetic parameters. The probability for synchronous functioning of small channels with SSA was higher than that with SRE. To analyse the role of the clusters in the biological activities of SRE and SSA, we estimated the cluster contribution to a net transmembrane currents to be 60 and 90%, respectively.
- Published
- 2005
43. Synthesis of trehalose-based compounds and their inhibitory activities against Mycobacterium smegmatis.
- Author
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Wang J, Elchert B, Hui Y, Takemoto JY, Bensaci M, Wennergren J, Chang H, Rai R, and Chang CW
- Subjects
- Combinatorial Chemistry Techniques, Dose-Response Relationship, Drug, Isoniazid, Microbial Sensitivity Tests, Structure-Activity Relationship, Trehalose chemistry, Mycobacterium smegmatis drug effects, Trehalose chemical synthesis, Trehalose pharmacology
- Abstract
The synthesis of a library of trehalose-based compounds has been accomplished, and their activities against Mycobacterium smegmatis have been determined. A preliminary structure-activity relationship (SAR) is reported. Despite not having a potent lead, one of the trehalose derivatives displays strong activity when applied with isoniazid (INH), which is known to have low sterilizing activity. The bacteriocidal nature of our compounds against Mycobacterium may be significant for the development of new therapies against tuberculosis.
- Published
- 2004
- Full Text
- View/download PDF
44. Sphingolipid C4 hydroxylation influences properties of yeast detergent-insoluble glycolipid-enriched membranes.
- Author
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Idkowiak-Baldys J, Grilley MM, and Takemoto JY
- Subjects
- Cell Fractionation, Cell Membrane metabolism, Centrifugation, Density Gradient, Detergents, Saccharomyces cerevisiae drug effects, Solubility, Glycolipids metabolism, Membrane Lipids metabolism, Saccharomyces cerevisiae physiology, Sphingolipids metabolism, Sphingolipids pharmacology
- Abstract
Sphingoid base C4 hydroxylation is required for syringomycin E action on the yeast plasma membrane. Detergent-insoluble glycolipid-enriched membranes (DIGs) from a yeast strain lacking C4 hydroxylated sphingoid bases (sur2delta) are composed of linear membrane fragments instead of vesicular structures observed for wild-type DIGs, though they have similar lipid compositions and amounts of DIG marker proteins. Light-scattering bands collected from sur2delta after centrifugation of Triton X-100-treated cell lysates in continuous density gradients have lower buoyant densities than that of the wild-type. The results show that C4 hydroxylation influences the physical and structural properties of DIGs and suggest that syringomycin E interacts with lipid rafts.
- Published
- 2004
- Full Text
- View/download PDF
45. Application of the synthetic aminosugars for glycodiversification: synthesis and antimicrobial studies of pyranmycin.
- Author
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Elchert B, Li J, Wang J, Hui Y, Rai R, Ptak R, Ward P, Takemoto JY, Bensaci M, and Chang CW
- Subjects
- Aminoglycosides chemistry, Aminoglycosides pharmacology, Anti-Bacterial Agents chemistry, Anti-Bacterial Agents pharmacology, Anti-HIV Agents chemistry, Anti-HIV Agents pharmacology, Escherichia coli drug effects, Gene Products, rev biosynthesis, Gene Products, rev genetics, Gene Products, tat biosynthesis, Gene Products, tat genetics, HeLa Cells, Humans, Microbial Sensitivity Tests, Molecular Structure, Structure-Activity Relationship, Transfection, Amino Sugars chemistry, Aminoglycosides chemical synthesis, Anti-Bacterial Agents chemical synthesis, Anti-HIV Agents chemical synthesis
- Abstract
A divergent approach was employed for the synthesis of aminosugars, from which a novel library of aminoglycoside antibiotics (pyranmycins) was synthesized. Pyranmycins have comparable antibacterial activity as neomycin, a clinically used aminoglycoside antibiotic, against Escherichia coli, Staphylococcus aureus, Bacillus subtilis, and Mycobacterium smegmatis. In addition, pyranmycins, like streptomycin, are bacteriocidal while isoniazid (INH) is bacteriostatic. Therefore, pyranmycins may provide new therapeutic options in the treatment against tuberculosis. Several members of pyranmycins also manifest modest anti-Tat and anti-Rev activities, which may aid in the development of new anti-HIV agents. Although the antibacterial activity of pyranmycins against aminoglycoside resistant bacteria is less than expected, the synthetic methodologies of utilizing a library of aminosugars can be a model for future studies of glycodiversification or glycorandomization.
- Published
- 2004
- Full Text
- View/download PDF
46. [Interaction between filamentous actin and lipid bilayer causes the increase of syringomycin E channel-forming activity].
- Author
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Bessonov AN, Gur'nev FA, Kuznetsova IM, Takemoto JY, Turoverov KK, Malev VV, and Shchagina LV
- Subjects
- Actins pharmacology, Ion Channels chemistry, Lipid Bilayers chemistry, Membrane Potentials drug effects, Time Factors, Actins metabolism, Bacterial Toxins pharmacology, Ion Channels metabolism, Lipid Bilayers metabolism, Peptides, Cyclic pharmacology
- Abstract
The effect of filamentous (F) actin on the channel-forming activity of syringomycin E (SRE) in negatively charged and uncharged bilayer lipid membranes (BLM) was studied. F-actin did not affect the membrane conductance in the absence of SRE. No changes in SRE-induced membrane conductance were observed when the above agents were added to the same side of BLM. However, the opposite side addition of F-actin and SRE provokes a multiple increase in membrane conductance. The similar voltage dependence of membrane conductance, equal values of single channel conductance and the effective gating charge of the channels upon F-actin action suggests that the actin-dependent increase in BLM conductance may result from an increase in the number of opened SRE-channels. BLM conductance kinetics depends on the sequence of SRE and F-actin addition, suggesting that actin-dependent rise of conductance may be induced by BLM structural changes that follow F-actin adsorption. F-actin exerted similar effect on membrane conductance of both negatively charged and uncharged bilayers, as well as on conductance of BLM with high ionic strength bathing solution, suggesting the major role for hydrophobic interactions in F-actin adsorption on lipid bilayer.
- Published
- 2004
47. Structure-function studies of yeast C-4 sphingolipid long chain base hydroxylase.
- Author
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Idkowiak-Baldys J, Takemoto JY, and Grilley MM
- Subjects
- Amino Acid Sequence, Antifungal Agents pharmacology, Histidine metabolism, Molecular Sequence Data, Mutagenesis, Site-Directed, Peptides, Cyclic pharmacology, Saccharomyces cerevisiae drug effects, Saccharomyces cerevisiae Proteins drug effects, Saccharomyces cerevisiae Proteins metabolism, Structure-Activity Relationship, Mixed Function Oxygenases, Saccharomyces cerevisiae enzymology, Saccharomyces cerevisiae Proteins chemistry, Sphingolipids metabolism
- Abstract
The roles of putative active site residues of the Saccharomyces cerevisiae sphingolipid C-4 long chain base hydroxylase (Sur2p) were investigated by site-directed mutagenesis. The replacement of any one of conserved His residues of three histidine-rich motifs with an alanine eliminated hydroxylase activity in vivo and in vitro, indicating that they are all essential elements of the active site. An additional conserved His residue (His 249) outside of the histidine-rich cluster region was also found to be crucial for activity. Additional mutants altered in residues in close proximity to the histidine-rich cluster were generated. In order to determine their roles in hydroxylase vs. desaturase activities, residues were replaced with conserved residues from the yeast Delta7-sterol-C5(6)-desaturase, Erg3p. Residues Phe 174, Asn 182, Ser 191, Leu 196, Pro 199, Asn 266, Tyr 269, Asp 271 and Gln 275 appear to be additionally important elements of the active site but their conversion into corresponding Erg3p residues did not lead to a gain in desaturase activity. It is concluded that Sur2p is a membrane-bound hydroxylase that belongs to the diiron family of eight-histidine motif enzymes.
- Published
- 2003
- Full Text
- View/download PDF
48. DmAMP1, an antifungal plant defensin from dahlia (Dahlia merckii), interacts with sphingolipids from Saccharomyces cerevisiae.
- Author
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Thevissen K, François IE, Takemoto JY, Ferket KK, Meert EM, and Cammue BP
- Subjects
- Enzyme-Linked Immunosorbent Assay, Ergosterol metabolism, Gene Deletion, Glycosylphosphatidylinositols metabolism, Membrane Glycoproteins genetics, Microbial Sensitivity Tests, Saccharomyces cerevisiae growth & development, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae Proteins metabolism, Antimicrobial Cationic Peptides metabolism, Antimicrobial Cationic Peptides pharmacology, Defensins, Plant Proteins metabolism, Plant Proteins pharmacology, Saccharomyces cerevisiae drug effects, Sphingolipids metabolism
- Abstract
DmAMP1, an antifungal plant defensin from Dahlia merckii, was shown previously to require the presence of sphingolipids for fungicidal action against Saccharomyces cerevisiae. Sphingolipids may stabilize glycosylphosphatidylinositol (GPI)-anchored proteins, which interact with DmAMP1, or they may directly serve as DmAMP1 binding sites. In the present study, we demonstrate that S. cerevisiae disruptants in GPI-anchored proteins showed small or no increased resistance towards DmAMP1 indicating no involvement of these proteins in DmAMP1 action. Further, studies using an enzyme-linked immunosorbent assay (ELISA)-based binding assay revealed that DmAMP1 interacts directly with sphingolipids isolated from S. cerevisiae and that this interaction is enhanced in the presence of equimolar concentrations of ergosterol. Therefore, DmAMP1 antifungal action involving membrane interaction with sphingolipids and ergosterol is proposed.
- Published
- 2003
- Full Text
- View/download PDF
49. Effective gating charge of ion channels induced by toxin syringomycin E in lipid bilayers.
- Author
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Schagina LV, Gurnev PA, Takemoto JY, and Malev VV
- Subjects
- Phloretin pharmacology, Phosphatidylserines metabolism, Ion Channel Gating drug effects, Ion Channels metabolism, Lipid Bilayers metabolism, Peptides, Cyclic pharmacology
- Abstract
To elucidate the voltage gating of syringomycin E (SRE) ion channels in lipid bilayers, the effective gating charge q was measured under different conditions. It was shown that q and its sign are dependent on membrane surface charge, dipole potential, and the outer potential (Delta phi). The q values were positive for charged bilayers and negative for uncharged bilayers bathed in the same 0.1 M NaCl solutions. Effects of dipole modifying agents on the gating properties of SRE channels were measured. In uncharged bilayers, addition of phloretin resulted in an increase of q values. For charged bilayers, the presence of RH-421 or 6-ketocholestanol leads to the reverse in the sign of q from positive to negative. The q values were potential-dependent at higher negative voltages with charged membranes bathed in solutions with high salt concentrations. It is concluded that lipid molecules participating in the SRE channel structure contribute to channel formation work due to Coulomb and dipolar interactions with the electric field applied to a membrane. The potential dependence of q is explained by interactions of charged and uncharged lipids with SRE molecules in the channels.
- Published
- 2003
- Full Text
- View/download PDF
50. IPT1-independent sphingolipid biosynthesis and yeast inhibition by syringomycin E and plant defensin DmAMP1.
- Author
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Im YJ, Idkowiak-Baldys J, Thevissen K, Cammue BP, and Takemoto JY
- Subjects
- Antimicrobial Cationic Peptides pharmacology, Culture Media pharmacology, Plant Proteins pharmacology, Saccharomyces cerevisiae growth & development, Defensins, Peptides, Cyclic pharmacology, Phosphotransferases (Alcohol Group Acceptor) metabolism, Saccharomyces cerevisiae drug effects, Saccharomyces cerevisiae enzymology, Saccharomyces cerevisiae Proteins, Sphingolipids biosynthesis
- Abstract
Both bacterial cyclic lipodepsipeptide syringomycin E and plant defensin DmAMP1 were shown previously to require expression of the yeast gene IPT1 for fungicidal action against Saccharomyces cerevisiae. IPT1 encodes a sphingolipid biosynthetic pathway glycotransferase that produces the terminal sphingolipid mannosyldiinositolphosphoceramide. However, when grown in half-strength potato dextrose medium, an ipt1 deletion mutant of S. cerevisiae was observed to be sensitive to syringomycin E and DmAMP1 and to produce small amounts of mannosyldiinositolphosphoceramide. These results show that the terminal sphingolipid but not IPT1 expression is required for fungicidal activity, and they suggest an IPT1-independent route for mannosyldiinositolphosphoceramide biosynthesis.
- Published
- 2003
- Full Text
- View/download PDF
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