Search

This study introduces a compositional autoencoder (CAE) framework designed to disentangle the complex interplay between genotypic and environmental factors in high-dimensional phenotype data to improve trait prediction in plant breeding and genetics programs. Traditional predictive methods, which use compact representations of high-dimensional data through handcrafted features or latent features like PCA or more recently autoencoders, do not separate genotype-specific and environment-specific factors. We hypothesize that disentangling these features into genotype-specific and environment-specific components can enhance predictive models. To test this, we developed a compositional autoencoder (CAE) that decomposes high-dimensional data into distinct genotype-specific and environment-specific latent features. Our CAE framework employs a hierarchical architecture within an autoencoder to effectively separate these entangled latent features. Applied to a maize diversity panel dataset, the CAE demonstrates superior modeling of environmental influences and 5-10 times improved predictive performance for key traits like Days to Pollen and Yield, compared to the traditional methods, including standard autoencoders, PCA with regression, and Partial Least Squares Regression (PLSR). By disentangling latent features, the CAE provides powerful tool for precision breeding and genetic research. This work significantly enhances trait prediction models, advancing agricultural and biological sciences.

Skin cancer is a serious and potentially fatal disease caused by DNA damage. Early detection significantly increases survival rates, making accurate diagnosis crucial. In this groundbreaking study, we present a hybrid framework based on Deep Learning (DL) that achieves precise classification of benign and malignant skin lesions. Our approach begins with dataset preprocessing to enhance classification accuracy, followed by training two separate pre-trained DL models, InceptionV3 and DenseNet121. By fusing the results of each model using the weighted sum rule, our system achieves exceptional accuracy rates. Specifically, we achieve a 92.27% detection accuracy rate, 92.33% sensitivity, 92.22% specificity, 90.81% precision, and 91.57% F1-score, outperforming existing models and demonstrating the robustness and trustworthiness of our hybrid approach. Our study represents a significant advance in skin cancer diagnosis and provides a promising foundation for further research in the field. With the potential to save countless lives through earlier detection, our hybrid deep-learning approach is a game-changer in the fight against skin cancer.

Federated Learning (FL) has emerged as a transformative approach for enabling distributed machine learning while preserving user privacy, yet it faces challenges like communication inefficiencies and reliance on centralized infrastructures, leading to increased latency and costs. This paper presents a novel FL methodology that overcomes these limitations by eliminating the dependency on edge servers, employing a server-assisted Proximity Evaluation for dynamic cluster formation based on data similarity, performance indices, and geographical proximity. Our integrated approach enhances operational efficiency and scalability through a Hybrid Decentralized Aggregation Protocol, which merges local model training with peer-to-peer weight exchange and a centralized final aggregation managed by a dynamically elected driver node, significantly curtailing global communication overhead. Additionally, the methodology includes Decentralized Driver Selection, Check-pointing to reduce network traffic, and a Health Status Verification Mechanism for system robustness. Validated using the breast cancer dataset, our architecture not only demonstrates a nearly tenfold reduction in communication overhead but also shows remarkable improvements in reducing training latency and energy consumption while maintaining high learning performance, offering a scalable, efficient, and privacy-preserving solution for the future of federated learning ecosystems., Comment: This research article got accepted in COMPSAC conference and going to be published to IEEE

Our study presents a multifaceted approach to enhancing user interaction and content relevance in social media platforms through a federated learning framework. We introduce personalized GPT and Context-based Social Media LLM models, utilizing federated learning for privacy and security. Four client entities receive a base GPT-2 model and locally collected social media data, with federated aggregation ensuring up-to-date model maintenance. Subsequent modules focus on categorizing user posts, computing user persona scores, and identifying relevant posts from friends' lists. A quantifying social engagement approach, coupled with matrix factorization techniques, facilitates personalized content suggestions in real-time. An adaptive feedback loop and readability score algorithm also enhance the quality and relevance of content presented to users. Our system offers a comprehensive solution to content filtering and recommendation, fostering a tailored and engaging social media experience while safeguarding user privacy., Comment: This research paper is submitted to ASONAM 2024 conference on Advances in Social Networks Analysis and Mining and going to be published in Springer

Our paper introduces a novel approach to social network information retrieval and user engagement through a personalized chatbot system empowered by Federated Learning GPT. The system is designed to seamlessly aggregate and curate diverse social media data sources, including user posts, multimedia content, and trending news. Leveraging Federated Learning techniques, the GPT model is trained on decentralized data sources to ensure privacy and security while providing personalized insights and recommendations. Users interact with the chatbot through an intuitive interface, accessing tailored information and real-time updates on social media trends and user-generated content. The system's innovative architecture enables efficient processing of input files, parsing and enriching text data with metadata, and generating relevant questions and answers using advanced language models. By facilitating interactive access to a wealth of social network information, this personalized chatbot system represents a significant advancement in social media communication and knowledge dissemination., Comment: This research paper is submitted to ASONAM 2024 conference on Advances in Social Networks Analysis and Mining and going to be published in Springer

Plant stress phenotyping traditionally relies on expert assessments and specialized models, limiting scalability in agriculture. Recent advances in multimodal large language models (LLMs) offer potential solutions to this challenge. We present AgEval, a benchmark comprising 12 diverse plant stress phenotyping tasks, to evaluate these models' capabilities. Our study assesses zero-shot and few-shot in-context learning performance of state-of-the-art models, including Claude, GPT, Gemini, and LLaVA. Results show significant performance improvements with few-shot learning, with F1 scores increasing from 46.24% to 73.37% in 8-shot identification for the best-performing model. Few-shot examples from other classes in the dataset have negligible or negative impacts, although having the exact category example helps to increase performance by 15.38%. We also quantify the consistency of model performance across different classes within each task, finding that the coefficient of variance (CV) ranges from 26.02% to 58.03% across models, implying that subject matter expertise is needed - of 'difficult' classes - to achieve reliability in performance. AgEval establishes baseline metrics for multimodal LLMs in agricultural applications, offering insights into their promise for enhancing plant stress phenotyping at scale. Benchmark and code can be accessed at: https://anonymous.4open.science/r/AgEval/

Federated learning has become a significant approach for training machine learning models using decentralized data without necessitating the sharing of this data. Recently, the incorporation of generative artificial intelligence (AI) methods has provided new possibilities for improving privacy, augmenting data, and customizing models. This research explores potential integrations of generative AI in federated learning, revealing various opportunities to enhance privacy, data efficiency, and model performance. It particularly emphasizes the importance of generative models like generative adversarial networks (GANs) and variational autoencoders (VAEs) in creating synthetic data that replicates the distribution of real data. Generating synthetic data helps federated learning address challenges related to limited data availability and supports robust model development. Additionally, we examine various applications of generative AI in federated learning that enable more personalized solutions., Comment: We are going to submit this research article into a conference which is best fit for this topic

User activities can influence their subsequent interactions with a post, generating interest in the user. Typically, users interact with posts from friends by commenting and using reaction emojis, reflecting their level of interest on social media such as Facebook, Twitter, and Reddit. Our objective is to analyze user history over time, including their posts and engagement on various topics. Additionally, we take into account the user's profile, seeking connections between their activities and social media platforms. By integrating user history, engagement, and persona, we aim to assess recommendation scores based on relevant item sharing by Hit Rate (HR) and the quality of the ranking system by Normalized Discounted Cumulative Gain (NDCG), where we achieve the highest for NeuMF 0.80 and 0.6 respectively. Our hybrid approach solves the cold-start problem when there is a new user, for new items cold-start problem will never occur, as we consider the post category values. To improve the performance of the model during cold-start we introduce collaborative filtering by looking for similar users and ranking the users based on the highest similarity scores., Comment: This research paper has been accepted in the Social Media Sway: Unraveling the Impact of Social Media on Human Behavior - SMS workshop, to be held in conjunction with the International Conference on Social Networks Analysis and Mining (ASONAM 2024) and will be published in Springer

Social media platforms are extensively used for sharing personal emotions, daily activities, and various life events, keeping people updated with the latest happenings. From the moment a user creates an account, they continually expand their network of friends or followers, freely interacting with others by posting, commenting, and sharing content. Over time, user behavior evolves based on demographic attributes and the networks they establish. In this research, we propose a predictive method to understand how a user evolves on social media throughout their life and to forecast the next stage of their evolution. We fine-tune a GPT-like decoder-only model (we named it E-GPT: Evolution-GPT) to predict the future stages of a user's evolution in online social media. We evaluate the performance of these models and demonstrate how user attributes influence changes within their network by predicting future connections and shifts in user activities on social media, which also addresses other social media challenges such as recommendation systems., Comment: This article has been accepted as a long paper in the MSNDS 2024 workshop, to be held in conjunction with the International Conference on Social Networks Analysis and Mining (ASONAM 2024), September 2-5, 2024. and will be published in Springer

Can Visual Question Answering (VQA) systems perform just as well when deployed in the real world? Or are they susceptible to realistic corruption effects e.g. image blur, which can be detrimental in sensitive applications, such as medical VQA? While linguistic or textual robustness has been thoroughly explored in the VQA literature, there has yet to be any significant work on the visual robustness of VQA models. We propose the first large-scale benchmark comprising 213,000 augmented images, challenging the visual robustness of multiple VQA models and assessing the strength of realistic visual corruptions. Additionally, we have designed several robustness evaluation metrics that can be aggregated into a unified metric and tailored to fit a variety of use cases. Our experiments reveal several insights into the relationships between model size, performance, and robustness with the visual corruptions. Our benchmark highlights the need for a balanced approach in model development that considers model performance without compromising the robustness.

The scarcity of comprehensive datasets in surveillance, identification, image retrieval systems, and healthcare poses a significant challenge for researchers in exploring new methodologies and advancing knowledge in these respective fields. Furthermore, the need for full-body image datasets with detailed attributes like height, weight, age, and gender is particularly significant in areas such as fashion industry analytics, ergonomic design assessment, virtual reality avatar creation, and sports performance analysis. To address this gap, we have created the 'Celeb-FBI' dataset which contains 7,211 full-body images of individuals accompanied by detailed information on their height, age, weight, and gender. Following the dataset creation, we proceed with the preprocessing stages, including image cleaning, scaling, and the application of Synthetic Minority Oversampling Technique (SMOTE). Subsequently, utilizing this prepared dataset, we employed three deep learning approaches: Convolutional Neural Network (CNN), 50-layer ResNet, and 16-layer VGG, which are used for estimating height, weight, age, and gender from human full-body images. From the results obtained, ResNet-50 performed best for the system with an accuracy rate of 79.18% for age, 95.43% for gender, 85.60% for height and 81.91% for weight., Comment: Accepted for publication in 3rd International Conference on Advanced Communication and Intelligent Systems

Data augmentation is a powerful tool for improving deep learning-based image classifiers for plant stress identification and classification. However, selecting an effective set of augmentations from a large pool of candidates remains a key challenge, particularly in imbalanced and confounding datasets. We propose an approach for automated class-specific data augmentation using a genetic algorithm. We demonstrate the utility of our approach on soybean [Glycine max (L.) Merr] stress classification where symptoms are observed on leaves; a particularly challenging problem due to confounding classes in the dataset. Our approach yields substantial performance, achieving a mean-per-class accuracy of 97.61% and an overall accuracy of 98% on the soybean leaf stress dataset. Our method significantly improves the accuracy of the most challenging classes, with notable enhancements from 83.01% to 88.89% and from 85.71% to 94.05%, respectively. A key observation we make in this study is that high-performing augmentation strategies can be identified in a computationally efficient manner. We fine-tune only the linear layer of the baseline model with different augmentations, thereby reducing the computational burden associated with training classifiers from scratch for each augmentation policy while achieving exceptional performance. This research represents an advancement in automated data augmentation strategies for plant stress classification, particularly in the context of confounding datasets. Our findings contribute to the growing body of research in tailored augmentation techniques and their potential impact on disease management strategies, crop yields, and global food security. The proposed approach holds the potential to enhance the accuracy and efficiency of deep learning-based tools for managing plant stresses in agriculture.

We present a self-supervised framework that learns population-level codes for arbitrary ensembles of neural recordings at scale. We address two key challenges in scaling models with neural time-series data: sparse and variable electrode distribution across subjects and datasets. The Population Transformer (PopT) stacks on top of pretrained representations and enhances downstream decoding by enabling learned aggregation of multiple spatially-sparse data channels. The pretrained PopT lowers the amount of data required for downstream decoding experiments, while increasing accuracy, even on held-out subjects and tasks. Compared to end-to-end methods, this approach is computationally lightweight and more interpretable, while still retaining competitive performance. We further show how our framework is generalizable to multiple time-series embeddings and neural data modalities. Beyond decoding, we interpret the pretrained PopT and fine-tuned models to show how they can be used to extract neuroscience insights from massive amounts of data. We release our code as well as a pretrained PopT to enable off-the-shelf improvements in multi-channel intracranial data decoding and interpretability., Comment: 19 pages, 11 figures, submitted to ICLR 2025

With the proliferation of edge devices, there is a significant increase in attack surface on these devices. The decentralized deployment of threat intelligence on edge devices, coupled with adaptive machine learning techniques such as the in-context learning feature of Large Language Models (LLMs), represents a promising paradigm for enhancing cybersecurity on resource-constrained edge devices. This approach involves the deployment of lightweight machine learning models directly onto edge devices to analyze local data streams, such as network traffic and system logs, in real-time. Additionally, distributing computational tasks to an edge server reduces latency and improves responsiveness while also enhancing privacy by processing sensitive data locally. LLM servers can enable these edge servers to autonomously adapt to evolving threats and attack patterns, continuously updating their models to improve detection accuracy and reduce false positives. Furthermore, collaborative learning mechanisms facilitate peer-to-peer secure and trustworthy knowledge sharing among edge devices, enhancing the collective intelligence of the network and enabling dynamic threat mitigation measures such as device quarantine in response to detected anomalies. The scalability and flexibility of this approach make it well-suited for diverse and evolving network environments, as edge devices only send suspicious information such as network traffic and system log changes, offering a resilient and efficient solution to combat emerging cyber threats at the network edge. Thus, our proposed framework can improve edge computing security by providing better security in cyber threat detection and mitigation by isolating the edge devices from the network.

For natural language understanding and generation, embedding concepts using an order-based representation is an essential task. Unlike traditional point vector based representation, an order-based representation imposes geometric constraints on the representation vectors for explicitly capturing various semantic relationships that may exist between a pair of concepts. In existing literature, several approaches on order-based embedding have been proposed, mostly focusing on capturing hierarchical relationships; examples include vectors in Euclidean space, complex, Hyperbolic, order, and Box Embedding. Box embedding creates region-based rich representation of concepts, but along the process it sacrifices simplicity, requiring a custom-made optimization scheme for learning the representation. Hyperbolic embedding improves embedding quality by exploiting the ever-expanding property of Hyperbolic space, but it also suffers from the same fate as box embedding as gradient descent like optimization is not simple in the Hyperbolic space. In this work, we propose Binder, a novel approach for order-based representation. Binder uses binary vectors for embedding, so the embedding vectors are compact with an order of magnitude smaller footprint than other methods. Binder uses a simple and efficient optimization scheme for learning representation vectors with a linear time complexity. Our comprehensive experimental results show that Binder is very accurate, yielding competitive results on the representation task. But Binder stands out from its competitors on the transitive closure link prediction task as it can learn concept embeddings just from the direct edges, whereas all existing order-based approaches rely on the indirect edges.

Blood cell classification and counting are vital for the diagnosis of various blood-related diseases, such as anemia, leukemia, and thrombocytopenia. The manual process of blood cell classification and counting is time-consuming, prone to errors, and labor-intensive. Therefore, we have proposed a DL based automated system for blood cell classification and counting from microscopic blood smear images. We classify total of nine types of blood cells, including Erythrocyte, Erythroblast, Neutrophil, Basophil, Eosinophil, Lymphocyte, Monocyte, Immature Granulocytes, and Platelet. Several preprocessing steps like image resizing, rescaling, contrast enhancement and augmentation are utilized. To segment the blood cells from the entire microscopic images, we employed the U-Net model. This segmentation technique aids in extracting the region of interest (ROI) by removing complex and noisy background elements. Both pixel-level metrics such as accuracy, precision, and sensitivity, and object-level evaluation metrics like Intersection over Union (IOU) and Dice coefficient are considered to comprehensively evaluate the performance of the U-Net model. The segmentation model achieved impressive performance metrics, including 98.23% accuracy, 98.40% precision, 98.25% sensitivity, 95.97% Intersection over Union (IOU), and 97.92% Dice coefficient. Subsequently, a watershed algorithm is applied to the segmented images to separate overlapped blood cells and extract individual cells. We have proposed a BloodCell-Net approach incorporated with custom light weight convolutional neural network (LWCNN) for classifying individual blood cells into nine types. Comprehensive evaluation of the classifier's performance is conducted using metrics including accuracy, precision, recall, and F1 score. The classifier achieved an average accuracy of 97.10%, precision of 97.19%, recall of 97.01%, and F1 score of 97.10%., Comment: 24 pages, 7 tables and 13 Figures

The rise of fake news has made the need for effective detection methods, including in languages other than English, increasingly important. The study aims to address the challenges of Bangla which is considered a less important language. To this end, a complete dataset containing about 50,000 news items is proposed. Several deep learning models have been tested on this dataset, including the bidirectional gated recurrent unit (GRU), the long short-term memory (LSTM), the 1D convolutional neural network (CNN), and hybrid architectures. For this research, we assessed the efficacy of the model utilizing a range of useful measures, including recall, precision, F1 score, and accuracy. This was done by employing a big application. We carry out comprehensive trials to show the effectiveness of these models in identifying bogus news in Bangla, with the Bidirectional GRU model having a stunning accuracy of 99.16%. Our analysis highlights the importance of dataset balance and the need for continual improvement efforts to a substantial degree. This study makes a major contribution to the creation of Bangla fake news detecting systems with limited resources, thereby setting the stage for future improvements in the detection process., Comment: Accepted for publication in the 7th International Conference on Networking, Intelligent Systems & Security. The conference Proceedings will be published by ACM International Conference Proceeding Series (ICPS) ISBN N{\deg}: 979-8-4007-0019-4. 8 pages, 11 figures

Sugarcane, a key crop for the world's sugar industry, is prone to several diseases that have a substantial negative influence on both its yield and quality. To effectively manage and implement preventative initiatives, diseases must be detected promptly and accurately. In this study, we present a unique model called sugarcaneNet2024 that outperforms previous methods for automatically and quickly detecting sugarcane disease through leaf image processing. Our proposed model consolidates an optimized weighted average ensemble of seven customized and LASSO-regularized pre-trained models, particularly InceptionV3, InceptionResNetV2, DenseNet201, DenseNet169, Xception, and ResNet152V2. Initially, we added three more dense layers with 0.0001 LASSO regularization, three 30% dropout layers, and three batch normalizations with renorm enabled at the bottom of these pre-trained models to improve the performance. The accuracy of sugarcane leaf disease classification was greatly increased by this addition. Following this, several comparative studies between the average ensemble and individual models were carried out, indicating that the ensemble technique performed better. The average ensemble of all modified pre-trained models produced outstanding outcomes: 100%, 99%, 99%, and 99.45% for f1 score, precision, recall, and accuracy, respectively. Performance was further enhanced by the implementation of an optimized weighted average ensemble technique incorporated with grid search. This optimized sugarcaneNet2024 model performed the best for detecting sugarcane diseases, having achieved accuracy, precision, recall, and F1 score of 99.67%, 100%, 100%, and 100% , respectively., Comment: 32 pages, 11 Figures, 13 Tables

The rapid expansion of varied network systems, including the Internet of Things (IoT) and Industrial Internet of Things (IIoT), has led to an increasing range of cyber threats. Ensuring robust protection against these threats necessitates the implementation of an effective Intrusion Detection System (IDS). For more than a decade, researchers have delved into supervised machine learning techniques to develop IDS to classify normal and attack traffic. However, building effective IDS models using supervised learning requires a substantial number of benign and attack samples. To collect a sufficient number of attack samples from real-life scenarios is not possible since cyber attacks occur occasionally. Further, IDS trained and tested on known datasets fails in detecting zero-day or unknown attacks due to the swift evolution of attack patterns. To address this challenge, we put forth two strategies for semi-supervised learning based IDS where training samples of attacks are not required: 1) training a supervised machine learning model using randomly and uniformly dispersed synthetic attack samples; 2) building a One Class Classification (OCC) model that is trained exclusively on benign network traffic. We have implemented both approaches and compared their performances using 10 recent benchmark IDS datasets. Our findings demonstrate that the OCC model based on the state-of-art anomaly detection technique called usfAD significantly outperforms conventional supervised classification and other OCC based techniques when trained and tested considering real-life scenarios, particularly to detect previously unseen attacks., Comment: Deakin University, Australia | This material is based upon work supported by the Air Force Office of Scientific Research under award number FA2386-23-1-4003

With the increased use of network technologies like Internet of Things (IoT) in many real-world applications, new types of cyberattacks have been emerging. To safeguard critical infrastructures from these emerging threats, it is crucial to deploy an Intrusion Detection System (IDS) that can detect different types of attacks accurately while minimizing false alarms. Machine learning approaches have been used extensively in IDS and they are mainly using flat multi-class classification to differentiate normal traffic and different types of attacks. Though cyberattack types exhibit a hierarchical structure where similar granular attack subtypes can be grouped into more high-level attack types, hierarchical classification approach has not been explored well. In this paper, we investigate the effectiveness of hierarchical classification approach in IDS. We use a three-level hierarchical classification model to classify various network attacks, where the first level classifies benign or attack, the second level classifies coarse high-level attack types, and the third level classifies a granular level attack types. Our empirical results of using 10 different classification algorithms in 10 different datasets show that there is no significant difference in terms of overall classification performance (i.e., detecting normal and different types of attack correctly) of hierarchical and flat classification approaches. However, flat classification approach misclassify attacks as normal whereas hierarchical approach misclassify one type of attack as another attack type. In other words, the hierarchical classification approach significantly minimises attacks from misclassified as normal traffic, which is more important in critical systems., Comment: Deakin University, Australia | This material is based upon work supported by the Air Force Office of Scientific Research under award number FA2386-23-1-4003

In today's digital age, our dependence on IoT (Internet of Things) and IIoT (Industrial IoT) systems has grown immensely, which facilitates sensitive activities such as banking transactions and personal, enterprise data, and legal document exchanges. Cyberattackers consistently exploit weak security measures and tools. The Network Intrusion Detection System (IDS) acts as a primary tool against such cyber threats. However, machine learning-based IDSs, when trained on specific attack patterns, often misclassify new emerging cyberattacks. Further, the limited availability of attack instances for training a supervised learner and the ever-evolving nature of cyber threats further complicate the matter. This emphasizes the need for an adaptable IDS framework capable of recognizing and learning from unfamiliar/unseen attacks over time. In this research, we propose a one-class classification-driven IDS system structured on two tiers. The first tier distinguishes between normal activities and attacks/threats, while the second tier determines if the detected attack is known or unknown. Within this second tier, we also embed a multi-classification mechanism coupled with a clustering algorithm. This model not only identifies unseen attacks but also uses them for retraining them by clustering unseen attacks. This enables our model to be future-proofed, capable of evolving with emerging threat patterns. Leveraging one-class classifiers (OCC) at the first level, our approach bypasses the need for attack samples, addressing data imbalance and zero-day attack concerns and OCC at the second level can effectively separate unknown attacks from the known attacks. Our methodology and evaluations indicate that the presented framework exhibits promising potential for real-world deployments., Comment: Deakin University, Australia | This material is based upon work supported by the Air Force Office of Scientific Research under award number FA2386-23-1-4003

Brain-related diseases are more sensitive than other diseases due to several factors, including the complexity of surgical procedures, high costs, and other challenges. Alzheimer's disease is a common brain disorder that causes memory loss and the shrinking of brain cells. Early detection is critical for providing proper treatment to patients. However, identifying Alzheimer's at an early stage using manual scanning of CT or MRI scans is challenging. Therefore, researchers have delved into the exploration of computer-aided systems, employing Machine Learning and Deep Learning methodologies, which entail the training of datasets to detect Alzheimer's disease. This study aims to present a hybrid model that combines a CNN model's feature extraction capabilities with an LSTM model's detection capabilities. This study has applied the transfer learning called VGG16 in the hybrid model to extract features from MRI images. The LSTM detects features between the convolution layer and the fully connected layer. The output layer of the fully connected layer uses the softmax function. The training of the hybrid model involved utilizing the ADNI dataset. The trial findings revealed that the model achieved a level of accuracy of 98.8%, a sensitivity rate of 100%, and a specificity rate of 76%. The proposed hybrid model outperforms its contemporary CNN counterparts, showcasing a superior performance., Comment: Accepted In The 26th International Conference on Computer and Information Technology (ICCIT) On 13-15 December 2023

A major goal in neuroscience is to discover neural data representations that generalize. This goal is challenged by variability along recording sessions (e.g. environment), subjects (e.g. varying neural structures), and sensors (e.g. sensor noise), among others. Recent work has begun to address generalization across sessions and subjects, but few study robustness to sensor failure which is highly prevalent in neuroscience experiments. In order to address these generalizability dimensions we first collect our own electroencephalography dataset with numerous sessions, subjects, and sensors, then study two time series models: EEGNet (Lawhern et al., 2018) and TOTEM (Talukder et al., 2024). EEGNet is a widely used convolutional neural network, while TOTEM is a discrete time series tokenizer and transformer model. We find that TOTEM outperforms or matches EEGNet across all generalizability cases. Finally through analysis of TOTEM's latent codebook we observe that tokenization enables generalization., Comment: 9 pages, 8 figures

Soybean production is susceptible to biotic and abiotic stresses, exacerbated by extreme weather events. Water limiting stress, i.e. drought, emerges as a significant risk for soybean production, underscoring the need for advancements in stress monitoring for crop breeding and production. This project combines multi-modal information to identify the most effective and efficient automated methods to investigate drought response. We investigated a set of diverse soybean accessions using multiple sensors in a time series high-throughput phenotyping manner to: (1) develop a pipeline for rapid classification of soybean drought stress symptoms, and (2) investigate methods for early detection of drought stress. We utilized high-throughput time-series phenotyping using UAVs and sensors in conjunction with machine learning (ML) analytics, which offered a swift and efficient means of phenotyping. The red-edge and green bands were most effective to classify canopy wilting stress. The Red-Edge Chlorophyll Vegetation Index (RECI) successfully differentiated susceptible and tolerant soybean accessions prior to visual symptom development. We report pre-visual detection of soybean wilting using a combination of different vegetation indices. These results can contribute to early stress detection methodologies and rapid classification of drought responses in screening nurseries for breeding and production applications., Comment: 25 pages, 5 figures

With the advent of Information technology, the Bioinformatics research field is becoming increasingly attractive to researchers and academicians. The recent development of various Bioinformatics toolkits has facilitated the rapid processing and analysis of vast quantities of biological data for human perception. Most studies focus on locating two connected diseases and making some observations to construct diverse gene regulatory interaction networks, a forerunner to general drug design for curing illness. For instance, Hypopharyngeal cancer is a disease that is associated with EGFR-mutated lung adenocarcinoma. In this study, we select EGFR-mutated lung adenocarcinoma and Hypopharyngeal cancer by finding the Lung metastases in hypopharyngeal cancer. To conduct this study, we collect Mircorarray datasets from GEO (Gene Expression Omnibus), an online database controlled by NCBI. Differentially expressed genes, common genes, and hub genes between the selected two diseases are detected for the succeeding move. Our research findings have suggested common therapeutic molecules for the selected diseases based on 10 hub genes with the highest interactions according to the degree topology method and the maximum clique centrality (MCC). Our suggested therapeutic molecules will be fruitful for patients with those two diseases simultaneously., Comment: Accepted In The FEBS OPEN BIO (Q2, SCOPUS, SCIE, IF: 2.6, CS: 4.7), Wiley Journal, On FEB 25, 2024

The field of general time series analysis has recently begun to explore unified modeling, where a common architectural backbone can be retrained on a specific task for a specific dataset. In this work, we approach unification from a complementary vantage point: unification across tasks and domains. To this end, we explore the impact of discrete, learnt, time series data representations that enable generalist, cross-domain training. Our method, TOTEM, or TOkenized Time Series EMbeddings, proposes a simple tokenizer architecture that embeds time series data from varying domains using a discrete vectorized representation learned in a self-supervised manner. TOTEM works across multiple tasks and domains with minimal to no tuning. We study the efficacy of TOTEM with an extensive evaluation on 17 real world time series datasets across 3 tasks. We evaluate both the specialist (i.e., training a model on each domain) and generalist (i.e., training a single model on many domains) settings, and show that TOTEM matches or outperforms previous best methods on several popular benchmarks. The code can be found at: https://github.com/SaberaTalukder/TOTEM.

Financial institutions and businesses face an ongoing challenge from fraudulent transactions, prompting the need for effective detection methods. Detecting credit card fraud is crucial for identifying and preventing unauthorized transactions.Timely detection of fraud enables investigators to take swift actions to mitigate further losses. However, the investigation process is often time-consuming, limiting the number of alerts that can be thoroughly examined each day. Therefore, the primary objective of a fraud detection model is to provide accurate alerts while minimizing false alarms and missed fraud cases. In this paper, we introduce a state-of-the-art hybrid ensemble (ENS) dependable Machine learning (ML) model that intelligently combines multiple algorithms with proper weighted optimization using Grid search, including Decision Tree (DT), Random Forest (RF), K-Nearest Neighbor (KNN), and Multilayer Perceptron (MLP), to enhance fraud identification. To address the data imbalance issue, we employ the Instant Hardness Threshold (IHT) technique in conjunction with Logistic Regression (LR), surpassing conventional approaches. Our experiments are conducted on a publicly available credit card dataset comprising 284,807 transactions. The proposed model achieves impressive accuracy rates of 99.66%, 99.73%, 98.56%, and 99.79%, and a perfect 100% for the DT, RF, KNN, MLP and ENS models, respectively. The hybrid ensemble model outperforms existing works, establishing a new benchmark for detecting fraudulent transactions in high-frequency scenarios. The results highlight the effectiveness and reliability of our approach, demonstrating superior performance metrics and showcasing its exceptional potential for real-world fraud detection applications., Comment: Q1, Scopus, ISI, ESCI, IF: 4.8 (Accepted on Jan 19, 2024 - Cybersecurity, Springer Open Journal)

Wireless Sensor Networks (WSNs) play a pivotal role as infrastructures, encompassing both stationary and mobile sensors. These sensors self-organize and establish multi-hop connections for communication, collectively sensing, gathering, processing, and transmitting data about their surroundings. Despite their significance, WSNs face rapid and detrimental attacks that can disrupt functionality. Existing intrusion detection methods for WSNs encounter challenges such as low detection rates, computational overhead, and false alarms. These issues stem from sensor node resource constraints, data redundancy, and high correlation within the network. To address these challenges, we propose an innovative intrusion detection approach that integrates Machine Learning (ML) techniques with the Synthetic Minority Oversampling Technique Tomek Link (SMOTE-TomekLink) algorithm. This blend synthesizes minority instances and eliminates Tomek links, resulting in a balanced dataset that significantly enhances detection accuracy in WSNs. Additionally, we incorporate feature scaling through standardization to render input features consistent and scalable, facilitating more precise training and detection. To counteract imbalanced WSN datasets, we employ the SMOTE-Tomek resampling technique, mitigating overfitting and underfitting issues. Our comprehensive evaluation, using the WSN Dataset (WSN-DS) containing 374,661 records, identifies the optimal model for intrusion detection in WSNs. The standout outcome of our research is the remarkable performance of our model. In binary, it achieves an accuracy rate of 99.78% and in multiclass, it attains an exceptional accuracy rate of 99.92%. These findings underscore the efficiency and superiority of our proposal in the context of WSN intrusion detection, showcasing its effectiveness in detecting and mitigating intrusions in WSNs., Comment: International Journal of Information Security, Springer Journal - Q1, Scopus, ISI, SCIE, IF: 3.2 - Accepted on Jan 17, 2024

We evaluate different Neural Radiance Fields (NeRFs) techniques for the 3D reconstruction of plants in varied environments, from indoor settings to outdoor fields. Traditional methods usually fail to capture the complex geometric details of plants, which is crucial for phenotyping and breeding studies. We evaluate the reconstruction fidelity of NeRFs in three scenarios with increasing complexity and compare the results with the point cloud obtained using LiDAR as ground truth. In the most realistic field scenario, the NeRF models achieve a 74.6% F1 score after 30 minutes of training on the GPU, highlighting the efficacy of NeRFs for 3D reconstruction in challenging environments. Additionally, we propose an early stopping technique for NeRF training that almost halves the training time while achieving only a reduction of 7.4% in the average F1 score. This optimization process significantly enhances the speed and efficiency of 3D reconstruction using NeRFs. Our findings demonstrate the potential of NeRFs in detailed and realistic 3D plant reconstruction and suggest practical approaches for enhancing the speed and efficiency of NeRFs in the 3D reconstruction process., Comment: Published in 'Plant Phenomics'

Cybersecurity has emerged as a critical global concern. Intrusion Detection Systems (IDS) play a critical role in protecting interconnected networks by detecting malicious actors and activities. Machine Learning (ML)-based behavior analysis within the IDS has considerable potential for detecting dynamic cyber threats, identifying abnormalities, and identifying malicious conduct within the network. However, as the number of data grows, dimension reduction becomes an increasingly difficult task when training ML models. Addressing this, our paper introduces a novel ML-based network intrusion detection model that uses Random Oversampling (RO) to address data imbalance and Stacking Feature Embedding based on clustering results, as well as Principal Component Analysis (PCA) for dimension reduction and is specifically designed for large and imbalanced datasets. This model's performance is carefully evaluated using three cutting-edge benchmark datasets: UNSW-NB15, CIC-IDS-2017, and CIC-IDS-2018. On the UNSW-NB15 dataset, our trials show that the RF and ET models achieve accuracy rates of 99.59% and 99.95%, respectively. Furthermore, using the CIC-IDS2017 dataset, DT, RF, and ET models reach 99.99% accuracy, while DT and RF models obtain 99.94% accuracy on CIC-IDS2018. These performance results continuously outperform the state-of-art, indicating significant progress in the field of network intrusion detection. This achievement demonstrates the efficacy of the suggested methodology, which can be used practically to accurately monitor and identify network traffic intrusions, thereby blocking possible threats., Comment: Accepted in Journal of Big Data (Q1, IF: 8.1, SCIE) on Jan 19, 2024

This article introduces a novel, low-cost technique for hiding data in commercially available resistive-RAM (ReRAM) chips. The data is kept hidden in ReRAM cells by manipulating its analog physical properties through switching ($\textit{set/reset}$) operations. This hidden data, later, is retrieved by sensing the changes in cells' physical properties (i.e., $\textit{set/reset}$ time of the memory cells). The proposed system-level hiding technique does not affect the normal memory operations and does not require any hardware modifications. Furthermore, the proposed hiding approach is robust against temperature variations and the aging of the devices through normal read/write operation. The silicon results show that our proposed data hiding technique is acceptably fast with ${\sim}0.4bit/min$ of encoding and ${\sim}15.625bits/s$ of retrieval rates, and the hidden message is unrecoverable without the knowledge of the secret key, which is used to enhance the security of hidden information., Comment: arXiv admin note: text overlap with arXiv:2204.02104

We electrically characterized melt-quenched amorphized Ge2Sb2Te5 (GST) phase-change memory cells of 20 nm thickness, ~66-124 nm width and ~100-600 nm length with and without photoexcitation in 80-275 K temperature range. The cells show distinctly different current-voltage characteristics in the low-field (< ~19 MV/m), with a clear response to optical excitation by red light (wavelength = 613 nm), and high-field (> ~19 MV/m) regimes, with very weak response to optical excitation. The reduction in carrier activation energy with photoexcitation in the low-field regime increases from ~10 meV at 80 K to ~50 meV at 150 K (highest sensitivity) and decreases again to 5 meV at 275 K. The heterojunctions at the amorphous-crystalline GST interfaces at the two sides of the amorphous region lead to formation of a potential well for holes and a potential barrier for electrons with activation energies in the order of 0.7 eV at room temperature. The alignment of the steady state energy bands suggests formation of tunnel junctions at the interfaces for electrons and an overall electronic conduction by electrons. When photoexcited, the photo-generated holes are expected to be stored in the amorphous region, leading to positive charging of the amorphous region, reducing the barrier for electrons at the junctions and hence the device resistance in the low-field regime. Holes accumulated in the amorphous region are drained under high electric fields, hence the cells' response to photoexcitation is significantly reduced. These results support electronic origin of resistance drift in amorphous GST., Comment: Submitted for publication in Applied Physics Letters

We characterized resistance drift in phase change memory devices in the 80 K to 300 K temperature range by performing measurements on 20 nm thick, ~70-100 nm wide lateral Ge2Sb2Te5 (GST) line cells. The cells were amorphized using 1.5-2.5 V pulses with ~50-100 ns duration leading to ~0.4-1.1 mA peak reset currents resulting in amorphized lengths between ~50 and 700 nm. Resistance drift coefficients in the amorphized cells are calculated using constant voltage measurements starting as fast as within a second after amorphization and for 1 hour duration. Drift coefficients are in the range between ~0.02 and 0.1 with significant device-to-device variability and variations during the measurement period. At lower temperatures (higher resistance states) some devices show a complex dynamic behavior, with the resistance repeatedly increasing and decreasing significantly over periods in the order of seconds.

Time-resolved spectroscopy-based pump-probe experiments performed on quantum cascade lasers (QCLs) exhibit an initial fast gain recovery followed by a slow tail such that the equilibrium gain is not recovered in a cavity round-trip time. This ultra-slow gain recovery or non-recovered gain cannot be explained by only the intersubband carrier dynamics of QCLs. This work shows that the Fabry-Perot cavity dynamics and localized intersubband electron heating of QCLs are essential in ultra-slow and nonrecovered gain recovery. We developed a comprehensive model, coupling cavity dynamics to the intersubband electrons' thermal evolution. We employ a four-level coupled Maxwell-Bloch model that considers temperature-dependent scattering and transport mechanisms in calculating the gain recovery dynamics. If an intense pump pulse electrically pumped close to the threshold propagates in the forward direction after being coupled into the cavity, the reflected pump pulse will significantly deplete the gain medium while propagating in the backward direction. Additionally, we show that the intersubband electron sustains a localized high temperature even after the pump pulse has left, which affects the overall carrier dynamics and leads to an ultra-slow gain recovery process. At near-perfect reflectivity, we observe a gain depletion of 4% for 2 mm QCL. We further demonstrate that an additional 10% gain depletion of probe pulse is seen at a steady state when the laser is pumped at 1.6 times the threshold compared to the case where the hot electron effect is not considered., Comment: 20 pages, 11 figures

This work examines a symmetry-protected bound state in the continuum (BIC) supported unique all-dielectric dome-shaped metasurface (MS). The simple unit MS is made up of four dome-shaped nanobars of silicon in the top layer and silica glass as the substrate. Two strong transmission dips denoted as an electric dipole (ED) and magnetic dipole (MD) quasi-BIC with a high Q-factor that surpasses the value of 104 are observed after the symmetry between the nanobars is broken by a small angle from their initial position. A crossover between the ED and MD resonances is noticed when the periodicity of the MS is changed in the y direction. In addition, transmission spectra show the avoided-crossing phenomenon of dipole quasi-BIC resonances when the superstrate's refractive index (RI) is reduced from its initial value. Other widely used dielectric materials are additionally employed in dome-shaped nanobars to evaluate their performances in terms of sharpness and near-zero transmission. Moreover, Other forms of symmetry breakdown such as diagonal width and length asymmetry have been investigated for their impact on the Q-factor. Finally, we have demonstrated two significant applications, including refractometric glucose sensing and third harmonic generation (THG). Our dome-shaped MS is roughly 300 times more efficient at generating third harmonics than a flat rectangular silicon film MS. Our proposed BIC and q-BIC-facilitated MS may provide a method for enhancing the functionality of biological sensors, multimodal lasing, optical switches, and nonlinear optics., Comment: 15 pages, 6 figures, 1 table