59 results on '"Tamás Földes"'
Search Results
2. Uncovering low-frequency vibrations in surface-enhanced Raman of organic molecules
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Alexandra Boehmke Amoruso, Roberto A. Boto, Eoin Elliot, Bart de Nijs, Ruben Esteban, Tamás Földes, Fernando Aguilar-Galindo, Edina Rosta, Javier Aizpurua, and Jeremy J. Baumberg
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Science - Abstract
Abstract Accessing the terahertz (THz) spectral domain through surface-enhanced Raman spectroscopy (SERS) is challenging and opens up the study of low-frequency molecular and electronic excitations. Compared to direct THz probing of heterogenous ensembles, the extreme plasmonic confinement of visible light to deep sub-wavelength scales allows the study of hundreds or even single molecules. We show that self-assembled molecular monolayers of a set of simple aromatic thiols confined inside single-particle plasmonic nanocavities can be distinguished by their low-wavenumber spectral peaks below 200 cm−1, after removal of a bosonic inelastic contribution and an exponential background from the spectrum. Developing environment-dependent density-functional-theory simulations of the metal-molecule configuration enables the assignment and classification of their THz vibrations as well as the identification of intermolecular coupling effects and of the influence of the gold surface configuration. Furthermore, we show dramatically narrower THz SERS spectra from individual molecules at picocavities, which indicates the possibility to study intrinsic vibrational properties beyond inhomogeneous broadening, further supporting the key role of local environment.
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- 2024
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3. Effect of surface cleaning on seam quality of laser beam welded mixed joints
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Attila Zsolt Kenéz, Tamás Földes, and Éva Lublóy
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Surface cleaning method ,Laser beam welding ,Mechanical testing ,Micro-hardness testing ,Micro-Computer Tomography testing ,Materials of engineering and construction. Mechanics of materials ,TA401-492 - Abstract
In this study, different surface cleaning methods were used to remove greases and oils from the surface of the E235 steel tube component of the diamond segmented drill bit before laser beam welding. The mechanical, chemical and electromechanical cleaning methods were selected because they are suitable for removing greases and oils adhering to the surface during tube production. The cleaned samples were successfully welded using the same heat inputs by laser welding. The effect of mechanical processes with sandblasting and dry-ice blasting, chemical processes with isopropyl alcohol, acetone and alkaline acidic liquid, electromechanical process with a laser beam on micro-computer tomography, break-out value and micro-hardness measurement examined. The cleanliness of the surfaces and strength of the laser-welded joint was inferred from the break-out value (BOV), as this is the principal qualification value in mass production. The results were compared to the untreated sample. According to the results obtained in this study, any defects in the seams were analyzed, and no cracks founded by computer tomography. According to a shade of grey diagram, all the pretreated samples had a higher absorption than the untreated sample. While the chemical methods had a significant effect (59–66 %), the mechanical and electromechanical methods had a positive effect (22–48 %) compared to the untreated sample. In addition, the break-out values showed that the mechanical methods had a significantly higher effect (19 %) than the other surface cleaning methods. This test showed different results from the micro-CT scan. The microhardness test showed no difference between the hardnesses of the cleaned and uncleaned samples and no difference in seam thicknesses. The optimal oil removal process discusses in the conclusion part.
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- 2023
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4. Resolving sub-angstrom ambient motion through reconstruction from vibrational spectra
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Jack Griffiths, Tamás Földes, Bart de Nijs, Rohit Chikkaraddy, Demelza Wright, William M. Deacon, Dénes Berta, Charlie Readman, David-Benjamin Grys, Edina Rosta, and Jeremy J. Baumberg
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Science - Abstract
Tracking single molecule movements is a challenging task, but highly desired for applications and fundamental studies. Here the authors reconstruct the sub-angstrom relative movements of a molecule interacting with a metal adatom, by measuring its vibrational spectrum in a self-assembled monolayer, continuously modified by the adatom in a nanoparticle-on-mirror construct.
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- 2021
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5. Joint neutron/X-ray crystal structure of a mechanistically relevant complex of perdeuterated urate oxidase and simulations provide insight into the hydration step of catalysis
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Lindsay McGregor, Tamás Földes, Soi Bui, Martine Moulin, Nicolas Coquelle, Matthew P. Blakeley, Edina Rosta, and Roberto A. Steiner
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neutron/x-ray diffraction ,urate oxidase ,protein perdeuteration ,cofactor-independent oxidase ,biomolecular simulations ,Crystallography ,QD901-999 - Abstract
Cofactor-independent urate oxidase (UOX) is an ∼137 kDa tetrameric enzyme essential for uric acid (UA) catabolism in many organisms. UA is first oxidized by O2 to dehydroisourate (DHU) via a peroxo intermediate. DHU then undergoes hydration to 5-hydroxyisourate (5HIU). At different stages of the reaction both catalytic O2 and water occupy the `peroxo hole' above the organic substrate. Here, high-resolution neutron/X-ray crystallographic analysis at room temperature has been integrated with molecular dynamics simulations to investigate the hydration step of the reaction. The joint neutron/X-ray structure of perdeuterated Aspergillus flavus UOX in complex with its 8-azaxanthine (8AZA) inhibitor shows that the catalytic water molecule (W1) is present in the peroxo hole as neutral H2O, oriented at 45° with respect to the ligand. It is stabilized by Thr57 and Asn254 on different UOX protomers as well as by an O—H...π interaction with 8AZA. The active site Lys10–Thr57 dyad features a charged Lys10–NH3+ side chain engaged in a strong hydrogen bond with Thr57OG1, while the Thr57OG1–HG1 bond is rotationally dynamic and oriented toward the π system of the ligand, on average. Our analysis offers support for a mechanism in which W1 performs a nucleophilic attack on DHUC5 with Thr57HG1 central to a Lys10-assisted proton-relay system. Room-temperature crystallography and simulations also reveal conformational heterogeneity for Asn254 that modulates W1 stability in the peroxo hole. This is proposed to be an active mechanism to facilitate W1/O2 exchange during catalysis.
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- 2021
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6. Optical probes of molecules as nano-mechanical switches
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Dean Kos, Giuliana Di Martino, Alexandra Boehmke, Bart de Nijs, Dénes Berta, Tamás Földes, Sara Sangtarash, Edina Rosta, Hatef Sadeghi, and Jeremy J. Baumberg
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Science - Abstract
The development of molecular electronics at single molecule level calls for new tools beyond electrical characterisation. Kos et al. show an optical probe of molecular junctions in a plasmonic nanocavity geometry, which supports in situ interrogation of molecular configurations.
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- 2020
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7. Femtosecond Laser Surface Cleaning for Diamond Segmented Drill Bit Manufacturing
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Attila Zsolt Kenéz, Éva Lublóy, Gyula Bagyinszki, and Tamás Földes
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laser surface cleaning ,femtosecond laser ,ablation ,laser-beam welding ,mechanical testing ,micro-computer tomography testing ,Crystallography ,QD901-999 - Abstract
Microsecond and nanosecond lasers have been studied in the past for laser cleaning applications and, today, femtosecond lasers are also being used successfully for removing paint, rust, and surface contamination. For diamond segmented drill bits, it may be also necessary to improve the mechanical properties of the laser-welded joint, i.e., to increase the tensile strength and toughness. Therefore, in this study, we investigated the possibility of using femtosecond lasers to clean the surface before laser welding to see what effect it has on the mechanical properties of the joint. The end surface of the thin-walled tube was pretreated to remove grease and oil before laser-beam welding a powder metallurgical segment onto it and the results are compared to an untreated sample. The laser-welded seams were investigated by micro-computer tomography, break-out test, and optical microscopy. Any defects in the seams were analyzed and, according to the results obtained in this study, no cracks were found by computer tomography, a shade of grey diagram shows, and all the pre-treated samples had a higher absorption than the untreated sample. Four of the six treating parameters had a significant effect, +30% on average, and two treating parameters had a positive effect, +13.5% on average, compared to the untreated sample. In addition, the break-out values showed that only one treating parameter had a significantly, +19%, higher effect than the other treating parameters. This test showed different results from the micro-CT scan. The optimal process parameters for oil and grease removal are discussed in the conclusion.
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- 2023
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8. The Influence of Secondary Interactions on the [N−I−N] + Halogen Bond
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Tamás Földes, Sofia Lindblad, Emily R. Gonnering, Imre Pápai, Nathan P. Bowling, Zakarias L. Driscoll, Máté Erdélyi, Herh G. Vang, Flóra Boróka Németh, and Daniel von der Heiden
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inorganic chemicals ,Steric effects ,Halogenation ,Hot Paper ,Electrons ,Medicinal chemistry ,Catalysis ,chemistry.chemical_compound ,NMR spectroscopy ,Halogens ,Pyridine ,Halonium ion ,Moiety ,Reactivity (chemistry) ,Organisk kemi ,Halogen bond ,Full Paper ,Chemistry ,Organic Chemistry ,General Chemistry ,Full Papers ,Iodides ,iodonium ion ,density functional calculations ,Electrophile ,Halogen ,halogen bond ,Iodine - Abstract
[Bis(pyridine)iodine(I)]+ complexes offer controlled access to halonium ions under mild conditions. The reactivity of such stabilized halonium ions is primarily determined by their three‐center, four‐electron [N−I−N]+ halogen bond. We studied the importance of chelation, strain, steric hindrance and electrostatic interaction for the structure and reactivity of halogen bonded halonium ions by acquiring their 15N NMR coordination shifts and measuring their iodenium release rates, and interpreted the data with the support of DFT computations. A bidentate ligand stabilizes the [N−I−N]+ halogen bond, decreasing the halenium transfer rate. Strain weakens the bond and accordingly increases the release rate. Remote modifications in the backbone do not influence the stability as long as the effect is entirely steric. Incorporating an electron‐rich moiety close by the [N−I−N]+ motif increases the iodenium release rate. The analysis of the iodine(I) transfer mechanism highlights the impact of secondary interactions, and may provide a handle on the induction of stereoselectivity in electrophilic halogenations., Halogen bond‐stabilized halonium ions are mild halenium transfer agents. The dependence of their reactivity on chelation, strain, steric hindrance and electrostatic interaction has been evaluated using NMR, DFT and kinetics experiments. The mechanistic analysis of the transfer is expected to provide a handle in the induction of stereoselectivity in electrophilic halogenations.
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- 2021
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9. Carboxylate Catalyzed Isomerization of β,γ‐Unsaturated N ‐Acetylcysteamine Thioesters**
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Saara Riuttamäki, Gergely Laczkó, Ádám Madarász, Tamás Földes, Imre Pápai, Anton Bannykh, and Petri M. Pihko
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Kinetics ,Isomerism ,Isotopes ,Organic Chemistry ,Carboxylic Acids ,General Chemistry ,Catalysis - Abstract
We demonstrate herein the capacity of simple carboxylate salts - tetrametylammonium and tetramethylguanidinium pivalate - to act as catalysts in the isomerization of β,γ-unsaturated thioesters to α,β-unsaturated thioesters. The carboxylate catalysts gave reaction rates comparable to those obtained with DBU, but with fewer side reactions. The reaction exhibits a normal secondary kinetic isotope effect (k
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- 2022
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10. Joint neutron/X-ray crystal structure of a mechanistically relevant complex of perdeuterated urate oxidase and simulations provide insight into the hydration step of catalysis
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Tamás Földes, Edina Rosta, Soi Bui, Lindsay McGregor, Nicolas Coquelle, Martine Moulin, Matthew P. Blakeley, and Roberto A. Steiner
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NEUTRON/X-RAY DIFFRACTION ,Neutron/X-ray diffraction ,Crystal structure ,010402 general chemistry ,PROTEIN PERDEUTERATION ,01 natural sciences ,Biochemistry ,Catalysis ,03 medical and health sciences ,Molecular dynamics ,BIOMOLECULAR SIMULATIONS ,Side chain ,Cofactor-independent oxidase ,Molecule ,General Materials Science ,Biomolecular simulations ,030304 developmental biology ,Protein perdeuteration ,0303 health sciences ,Crystallography ,biology ,COFACTOR-INDEPENDENT OXIDASE ,Hydrogen bond ,Ligand ,Chemistry ,Urate oxidase ,technology, industry, and agriculture ,Active site ,General Chemistry ,Condensed Matter Physics ,Research Papers ,0104 chemical sciences ,QD901-999 ,biological sciences ,biology.protein - Abstract
The joint neutron/X-ray crystallographic structure of perdeuterated Aspergillus flavus urate oxidase in complex with the inhibitor 8-azaxanthine and a catalytic water bound in the peroxo hole is presented together with an integrated analysis using biomolecular simulations., Cofactor-independent urate oxidase (UOX) is an ∼137 kDa tetrameric enzyme essential for uric acid (UA) catabolism in many organisms. UA is first oxidized by O2 to dehydroisourate (DHU) via a peroxo intermediate. DHU then undergoes hydration to 5-hydroxyisourate (5HIU). At different stages of the reaction both catalytic O2 and water occupy the ‘peroxo hole’ above the organic substrate. Here, high-resolution neutron/X-ray crystallographic analysis at room temperature has been integrated with molecular dynamics simulations to investigate the hydration step of the reaction. The joint neutron/X-ray structure of perdeuterated Aspergillus flavus UOX in complex with its 8-azaxanthine (8AZA) inhibitor shows that the catalytic water molecule (W1) is present in the peroxo hole as neutral H2O, oriented at 45° with respect to the ligand. It is stabilized by Thr57 and Asn254 on different UOX protomers as well as by an O—H⋯π interaction with 8AZA. The active site Lys10–Thr57 dyad features a charged Lys10–NH3 + side chain engaged in a strong hydrogen bond with Thr57OG1, while the Thr57OG1–HG1 bond is rotationally dynamic and oriented toward the π system of the ligand, on average. Our analysis offers support for a mechanism in which W1 performs a nucleophilic attack on DHUC5 with Thr57HG1 central to a Lys10-assisted proton-relay system. Room-temperature crystallography and simulations also reveal conformational heterogeneity for Asn254 that modulates W1 stability in the peroxo hole. This is proposed to be an active mechanism to facilitate W1/O2 exchange during catalysis.
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- 2021
11. Combined free energy calculation and machine learning methods for understanding ligand unbinding kinetics
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Magd Badaoui, Pedro J. Buigues, Dénes Berta, Gaurav M. Mandana, Hankang Gu, Tamás Földes, Callum J. Dickson, Viktor Hornak, Mitsunori Kato, Carla Molteni, Simon Parsons, and Edina Rosta
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Machine Learning ,Kinetics ,F100 Chemistry ,G700 Artificial Intelligence ,Molecular Dynamics Simulation ,Physical and Theoretical Chemistry ,G760 Machine Learning ,Ligands ,Protein Binding ,Computer Science Applications - Abstract
The determination of drug residence times, which define the time an inhibitor is in complex with its target, is a fundamental part of the drug discovery process. Synthesis and experimental measurements of kinetic rate constants are, however, expensive and time consuming. In this work, we aimed to obtain drug residence times computationally. Furthermore, we propose a novel algorithm to identify molecular design objectives based on ligand unbinding kinetics. We designed an enhanced sampling technique to accurately predict the free-energy profiles of the ligand unbinding process, focusing on the free-energy barrier for unbinding. Our method first identifies unbinding paths determining a corresponding set of internal coordinates (ICs) that form contacts between the protein and the ligand; it then iteratively updates these interactions during a series of biased molecular dynamics (MD) simulations to reveal the ICs that are important for the whole of the unbinding process. Subsequently, we performed finite-temperature string simulations to obtain the free-energy barrier for unbinding using the set of ICs as a complex reaction coordinate. Importantly, we also aimed to enable the further design of drugs focusing on improved residence times. To this end, we developed a supervised machine learning (ML) approach with inputs from unbiased "downhill"trajectories initiated near the transition state (TS) ensemble of the string unbinding path. We demonstrate that our ML method can identify key ligand-protein interactions driving the system through the TS. Some of the most important drugs for cancer treatment are kinase inhibitors. One of these kinase targets is cyclin-dependent kinase 2 (CDK2), an appealing target for anticancer drug development. Here, we tested our method using two different CDK2 inhibitors for the potential further development of these compounds. We compared the free-energy barriers obtained from our calculations with those observed in available experimental data. We highlighted important interactions at the distal ends of the ligands that can be targeted for improved residence times. Our method provides a new tool to determine unbinding rates and to identify key structural features of the inhibitors that can be used as starting points for novel design strategies in drug discovery.
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- 2022
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12. Resolving sub-angstrom ambient motion through reconstruction from vibrational spectra
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Demelza Wright, Rohit Chikkaraddy, William M. Deacon, Jack Griffiths, Bart de Nijs, Jeremy J. Baumberg, Edina Rosta, Dénes Berta, Charlie Readman, David-Benjamin Grys, Tamás Földes, de Nijs, Bart [0000-0002-8234-723X], Chikkaraddy, Rohit [0000-0002-3840-4188], Grys, David [0000-0002-4038-6388], Baumberg, Jeremy [0000-0002-9606-9488], Apollo - University of Cambridge Repository, Baumberg, Jeremy J. [0000-0002-9606-9488], and Baumberg, Jeremy J [0000-0002-9606-9488]
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639/638/542/971 ,Science ,General Physics and Astronomy ,Motion (geometry) ,Bioengineering ,General Biochemistry, Genetics and Molecular Biology ,639/624/400/1021 ,Nuclear physics ,Nanotechnology ,Organic-inorganic nanostructures ,Angstrom ,Physics ,FOS: Nanotechnology ,Nanophotonics and plasmonics ,Multidisciplinary ,639/638/440/527/1821 ,34 Chemical Sciences ,639/925/357/404 ,article ,General Chemistry ,119/118 ,Surface spectroscopy ,Raman spectroscopy ,3406 Physical Chemistry ,140/133 ,51 Physical Sciences ,Vibrational spectra - Abstract
Metal/organic-molecule interactions underpin many key chemistries but occur on sub-nm scales where nanoscale visualisation techniques tend to average over heterogeneous distributions. Single molecule imaging techniques at the atomic scale have found it challenging to track chemical behaviour under ambient conditions. Surface-enhanced Raman spectroscopy can optically monitor the vibrations of single molecules but understanding is limited by the complexity of spectra and mismatch between theory and experiment. We demonstrate that spectra from an optically generated metallic adatom near a molecule of interest can be inverted into dynamic sub-Å metal-molecule interactions using a comprehensive model, revealing anomalous diffusion of a single atom. Transient metal-organic coordination bonds chemically perturb molecular functional groups > 10 bonds away. With continuous improvements in computational methods for modelling large and complex molecular systems, this technique will become increasingly applicable to accurately tracking more complex chemistries., We acknowledge financial support from EPSRC grant EP/G060649/1, EP/L027151/1, EP/G037221/1, EP/R013012/1, EPSRC NanoDTC, and EU grant THOR 829067 and ERC starting grant BioNet 757850. B.d.N. acknowledges support from the Leverhulme Trust and Isaac Newton Trust. We acknowledge use of the Rosalind computing facility at King’s College London. We are grateful to the UK Materials and Molecular Modelling Hub for computational resources, which is partially funded by EPSRC 397 (EP/P020194/1).
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- 2021
13. Halogen Bonding Helicates Encompassing Iodonium Cations
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Imre Pápai, Andreas Orthaber, Máté Erdélyi, Tamás Földes, Sofia Lindblad, Alan Vanderkooy, and Arvind Kumar Gupta
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Organisk kemi ,Halogen Bonds ,Halogen bond ,010405 organic chemistry ,Chemistry ,Communication ,halogen bonds ,Organic Chemistry ,General Medicine ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Communications ,Catalysis ,3c-4e bonds ,0104 chemical sciences ,Ion ,Crystallography ,halocyclization ,helices ,3c–4e bonds ,iodonium ions - Abstract
The first halonium‐ion‐based helices were designed and synthesized using oligo‐aryl/pyridylene‐ethynylene backbones that fold around reactive iodonium ions. Halogen bonding interactions stabilize the iodonium ions within the helices. Remarkably, the distance between two iodonium ions within a helix is shorter than the sum of their van der Waals radii. The helical conformations were characterized by X‐ray crystallography in the solid state, by NMR spectroscopy in solution and corroborated by DFT calculations. The helical complexes possess potential synthetic utility, as demonstrated by their ability to induce iodocyclization of 4‐penten‐1‐ol.
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- 2019
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14. CT and laboratory test of the wall panels after fire load
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Lili Eszter Hlavicka-Laczák, Kristóf Kapitány, György L. Balázs, Éva Lublóy, Viktor Hlavicka, and Tamás Földes
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Laboratory test ,business.industry ,Environmental science ,General Materials Science ,Building and Construction ,Structural engineering ,business ,Civil and Structural Engineering - Published
- 2019
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15. Optical Suppression of Energy Barriers in Single Molecule-Metal Binding
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Qianqi Lin, Demelza Wright, Edina Rosta, Bart de Nijs, Shu Hu, Tamás Földes, Jeremy J. Baumberg, Jack Griffiths, and Junyang Huang
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Materials science ,Spintronics ,Molecular electronics ,Nanotechnology ,Electrochemistry ,Metal ,symbols.namesake ,visual_art ,visual_art.visual_art_medium ,symbols ,Photocatalysis ,Molecule ,Raman spectroscopy ,Raman scattering - Abstract
Understanding the interactions between molecules and metal surfaces is of widespread importance in electrochemistry, sensing, medical imaging/targeting, molecular electronics and spintronics. Although many techniques have characterized the molecule-metal transient bonds, conflicting conclusions arise from their buried location and heterogeneity, while single-molecule probes are scarce. Confinement of optical fields to picometre length-scales around adatoms (termed picocavities [1] , Fig. 1a ) has enabled tip-enhanced and surface-enhanced Raman spectroscopies (TERS and SERS, Fig. 1e ) of single-molecules. However how adatoms change with molecule-metal interactions, with light (both key ingredients in photocatalysis), and how they link to picocavity formation in metal nanogaps is not understood.
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- 2021
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16. Mechanistic study of an immobilized molecular electrocatalyst by in situ gap-plasmon-assisted spectro-electrochemistry
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Tamás Földes, Demelza Wright, Andreas Wagner, Charlie Readman, Jack Griffiths, Qianqi Lin, Edina Rosta, Erwin Reisner, Jeremy J. Baumberg, Dénes Berta, Berta, D [0000-0002-8299-3784], Wagner, A [0000-0003-4464-4345], Rosta, E [0000-0002-9823-4766], Reisner, E [0000-0002-7781-1616], Baumberg, JJ [0000-0002-9606-9488], and Apollo - University of Cambridge Repository
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13 Climate Action ,Materials science ,34 Chemical Sciences ,Process Chemistry and Technology ,Bioengineering ,Nanotechnology ,Electrocatalyst ,Electrochemistry ,Biochemistry ,Catalysis ,chemistry.chemical_compound ,Transition metal ,chemistry ,3406 Physical Chemistry ,Molecule ,Density functional theory ,Terpyridine ,Plasmon - Abstract
Immobilized first-row transition metal complexes are potential low-cost electrocatalysts for selective CO2 conversion in the production of renewable fuels. Mechanistic understanding of their function is vital for the development of next-generation catalysts, although the poor surface sensitivity of many techniques makes this challenging. Here, a nickel bis(terpyridine) complex is introduced as a CO2 reduction electrocatalyst in a unique electrode geometry, sandwiched by thiol-anchoring moieties between two gold surfaces. Gap-plasmon-assisted surface-enhanced Raman scattering spectroscopy coupled with density functional theory calculations reveals that the nature of the anchoring group plays a pivotal role in the catalytic mechanism. Our in situ spectro-electrochemical measurement enables the detection of as few as eight molecules undergoing redox transformations in individual plasmonic hotspots, together with the calibration of electrical fields via vibrational Stark effects. This advance allows rapid exploration of non-resonant redox reactions at the few-molecule level and provides scope for future mechanistic studies of single molecules. Tracking immobilized molecular complexes under in situ conditions is vital for the development of next-generation catalysts, although the poor surface sensitivity of many techniques makes this challenging. Now, the role of the anchoring group in a nickel bis(terpyridine) complex has been elucidated by in situ gap-plasmon-assisted SERS coupled with DFT calculations.
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- 2021
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17. O-I-O halogen bond of halonium ions
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Tamás Földes, Imre Pápai, Sofia Lindblad, Máté Erdélyi, Alan Vanderkooy, and Flóra Boróka Németh
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inorganic chemicals ,Organisk kemi ,Halogen bond ,Chemistry ,Synthon ,Organic Chemistry ,Metals and Alloys ,Supramolecular chemistry ,General Chemistry ,Catalysis ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Solvent ,Reagent ,Halogen ,Polymer chemistry ,Materials Chemistry ,Ceramics and Composites ,Halonium ion ,Reactivity (chemistry) - Abstract
The reactivity of halonium ions is conveniently modulated by three-center, four-electron halogen bonds. Such stabilized halonium complexes are valuable reagents for oxidations and halofunctionalization reactions. We report the first example of the stabilization of a halenium ion in a three-center, four-electron halogen bond with two oxygen ligands. The influence of electron density and solvent on the stability of the complexes is assessed. O–I–O halogen bond complexes are applicable as synthetic reagents and as supramolecular synthons.
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- 2020
18. Mechanistic Insight into Asymmetric Hetero-Michael Addition of α,β-Unsaturated Carboxylic Acids Catalyzed by Multifunctional Thioureas
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Tamás Földes, Yusuke Kobayashi, Noboru Hayama, Kazuya Nishibayashi, Ryuta Kuramoto, Imre Pápai, and Yoshiji Takemoto
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Tertiary amine ,010405 organic chemistry ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Medicinal chemistry ,Catalysis ,0104 chemical sciences ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,chemistry ,Nucleophile ,Electrophile ,Michael reaction ,Lewis acids and bases ,Carboxylate ,Boronic acid ,Benzoic acid - Abstract
Carboxylic acids and their corresponding carboxylate anions are generally utilized as Brønsted acids/bases and oxygen nucleophiles in organic synthesis. However, a few asymmetric reactions have used carboxylic acids as electrophiles. Although chiral thioureas bearing both arylboronic acid and tertiary amine were found to promote the aza-Michael addition of BnONH2 to α, β-unsaturated carboxylic acids with moderate to good enantioselectivities, the reaction mechanism remains to be clarified. Detailed investigation of the reaction using spectroscopic analysis and kinetic studies identified tetrahedral borate complexes, comprising two carboxylate anions, as reaction intermediates. We realized a dramatic improvement in product enantioselectivity with the addition of 1 equiv of benzoic acid. In this aza-Michael reaction, the boronic acid not only activates the carboxylate ligand as a Lewis acid, together with the thiourea NH-protons, but also functions as a Brønsted base through a benzoyloxy anion to activate the nucleophile. Moreover, molecular sieves were found to play an important role in generating the ternary borate complexes, which were crucial for obtaining high enantioselectivity as demonstrated by DFT calculations. We also designed a new thiourea catalyst for the intramolecular oxa-Michael addition to suppress another catalytic pathway via a binary borate complex using steric hindrance between the catalyst and substrate. Finally, to demonstrate the synthetic versatility of both hetero-Michael additions, we used them to accomplish the asymmetric synthesis of key intermediates in pharmaceutically important molecules, including sitagliptin and α-tocopherol.
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- 2018
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19. Applicability evaluation of advanced processes for elimination of neurophysiological activity of antidepressant fluoxetine
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László Szabó, Dóra J. Kiss, Tünde Tóth, Krisztina J. Kovács, László Wojnárovits, Tamás Németh, György T. Balogh, Viktória Mile, Renáta Homlok, Erzsébet Takács, and Tamás Földes
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Environmental Engineering ,Health, Toxicology and Mutagenesis ,Binding pocket ,010501 environmental sciences ,Hydroxylation ,010402 general chemistry ,01 natural sciences ,Fluoxetine ,medicine ,Animals ,Humans ,Environmental Chemistry ,Organic chemistry ,0105 earth and related environmental sciences ,Quantum chemical ,Chemistry ,Public Health, Environmental and Occupational Health ,Water ,General Medicine ,General Chemistry ,Neurophysiology ,Neurophysiological Monitoring ,Pollution ,Combinatorial chemistry ,Antidepressive Agents ,Peroxides ,0104 chemical sciences ,Molecular Docking Simulation ,Product analysis ,Aromatic hydroxylation ,Antidepressant ,Oxidation-Reduction ,Water Pollutants, Chemical ,Prolonged treatment ,medicine.drug - Abstract
Presence of the antidepressant fluoxetine in different water bodies has raised significant concerns due to its detrimental effects on non-targeted organisms, especially on fish. When seeking for an appropriate technology able to remove fluoxetine residue from a complex water matrix, special attention needs to be paid to the elimination of the neurophysiological activity that eventually lies behind the noxious effects of the parent compound. Our aim was to probe the applicability of advanced oxidation techniques for this purpose using in situ generated free radical system based on OH-initiated peroxyl radical-mediated processes. By performing product analysis experiments along with quantum chemical calculations, the most probable reaction paths were analyzed including aromatic hydroxylation, defluorination, O-dealkylation and C-dealkylation. The candidates for neurophysiological activity were further investigated by molecular docking. The hydroxylated derivatives are well accommodated in the binding pocket of the corresponding protein, suggesting that these compounds may retain the activity of the parent compound. From a worst-case perspective, we suggest that prolonged treatment needs to be applied to further transform hydroxylated derivatives.
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- 2018
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20. CT alkalmazási lehetőségei az építőanyagok vizsgálatánál
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Éva Lublóy, Viktor Hlavicka, Kristóf Kapitány, Tamás Földes, and L. György Balázs
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- 2018
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21. Cover Feature: The Influence of Secondary Interactions on the [N−I−N] + Halogen Bond (Chem. Eur. J. 55/2021)
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Máté Erdélyi, Herh G. Vang, Nathan P. Bowling, Flóra Boróka Németh, Sofia Lindblad, Daniel von der Heiden, Imre Pápai, Emily R. Gonnering, Zakarias L. Driscoll, and Tamás Földes
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Crystallography ,Halogen bond ,Feature (computer vision) ,Chemistry ,Organic Chemistry ,Cover (algebra) ,General Chemistry ,Nuclear magnetic resonance spectroscopy ,Catalysis - Published
- 2021
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22. Correlating electronic and catalytic properties of frustrated Lewis pairs for imine hydrogenation
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Tamás Földes, Tibor Soós, Éva Dorkó, Ádám Gyömöre, Imre Pápai, and Bianka Kótai
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010405 organic chemistry ,Chemistry ,Organic Chemistry ,Imine ,Boranes ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Frustrated Lewis pair ,0104 chemical sciences ,Catalysis ,Inorganic Chemistry ,chemistry.chemical_compound ,Materials Chemistry ,Organic chemistry ,Experimental work ,Lewis acids and bases ,Physical and Theoretical Chemistry - Abstract
• Combined computational and experimental work to probe Lewis acidity of some boranes to be used in FLP hydrogenation.
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- 2017
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23. First report on vertebrate coprolites from the Upper Cretaceous (Santonian) Csehbánya Formation of Iharkút, Hungary
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Tamás Földes, Krisztina Buczkó, Attila Ősi, Emese Bodor, Richárd Tokai, Gábor Botfalvai, Zsolt Dallos, and Martin Segesdi
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010506 paleontology ,biology ,Coprolite ,Paleontology ,Zoology ,Vertebrate ,010502 geochemistry & geophysics ,biology.organism_classification ,01 natural sciences ,Cretaceous ,Csehbánya Formation ,biology.animal ,Subaerial ,Pycnodontiformes ,Sedimentary rock ,Omnivore ,0105 earth and related environmental sciences - Abstract
More than 2600 coprolites produced by vertebrates have been found in the fluvial lacustrine beds of the Upper Cretaceous (Santonian) Csehbanya Formation, Iharkut, western Hungary. In this study the mineral components, embedded dietary residues of these coprolites were examined and their ecological significance are discussed. The coprolite assemblage, containing mostly small-sized (length between 0.8 and 8.6 cm) specimens, can be ordered into seven different morphotypes, among which the spiral ones might have been produced by fish with spiral intestinal valves. The surface of the coprolites is mostly smooth and desiccation cracks were observed in only one case, suggesting that most of these coprolites were buried in-situ without long-term subaerial exposure. The fine-grained matrix of coprolites contains small holes, partially digested plant and animal residues but no sedimentary particles. CT-scanning was an effective method for revealing embedded dietary residues despite that the coprolites contain a large amount of pyrite. The coprolites contain cuticle remains, coalified seeds, pollen grains and diatoms. Animal residues may be the evidence of predation: mollusk shell and bone fragments, ganoid scales of Lepisosteiformes fish were frequent and one Pycnodontiformes fish tooth was found as well. It is not possible to ascertain the real producer of the coprolites, but, according to these remains, the Lepisosteiformes and Pycnodontiformes fish were included in the producer's prey. Not only the bone- but also the plant-bearing coprolites are highly phosphatic with mineral apatite in their matrix. However, the embedding fluvial sediment has significantly different chemical composition. The high phosphatic content of coprolites and the apatite might be derived from the carnivorous diet. Plant remains in the phosphatic coprolites may imply an omnivore producer or were the result of their incidental ingestion. Rapid burial and the mineral content of the animal nutriment might have been the responsible factors for the good preservation of the excrements.
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- 2017
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24. Hydroxyl radical induced transformation of phenylurea herbicides: A theoretical study
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László Wojnárovits, Viktória Mile, Tamás Földes, Ildikó Harsányi, Krisztina J. Kovács, and Erzsébet Takács
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Radiation ,Aqueous solution ,Radical ,010501 environmental sciences ,010402 general chemistry ,Ring (chemistry) ,Photochemistry ,01 natural sciences ,0104 chemical sciences ,Gibbs free energy ,Hydroxylation ,chemistry.chemical_compound ,symbols.namesake ,chemistry ,Radiolysis ,symbols ,Density functional theory ,Hydroxyl radical ,0105 earth and related environmental sciences - Abstract
Aromatic ring hydroxylation reactions occurring during radiolysis of aqueous solutions are studied on the example of phenylurea herbicides by Density Functional Theory calculations. The effect of the aqueous media is taken into account by using the Solvation Model Based on Density model. Hydroxyl radical adds to the ring because the activation free energies (0.4–47.2 kJ mol−1) are low and also the Gibbs free energies have high negative values ((−27.4) to (−5.9) kJ mol−1). According to the calculations in most of cases the ortho- and para-addition is preferred in agreement with the experimental results. In these reactions hydroxycyclohexadienyl type radicals form. In a second type reaction, when loss of chlorine atom takes place, OH/Cl substitution occurs without cyclohexadienyl type intermediate.
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- 2017
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25. Organocatalytic Access to a
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Rossana, Fanelli, Dénes, Berta, Tamás, Földes, Edina, Rosta, Robert Andrew, Atkinson, Hans-Jörg, Hofmann, Kenneth, Shankland, and Alexander J A, Cobb
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Stereoisomerism ,Amino Acids ,Organic Chemicals ,Crystallography, X-Ray ,Peptides ,Catalysis - Abstract
In this study, we have developed a highly enantioselective organocatalytic route to the (1
- Published
- 2019
26. Dynamic Refolding of Ion-Pair Catalysts in Response to Different Anions
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Dimitris Noutsias, Filip Topić, Kari Rissanen, Petri M. Pihko, Antti J. Neuvonen, Tamás Földes, and Imre Pápai
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inorganic chemicals ,Bearing (mechanical) ,anionit ,catalysis ,010405 organic chemistry ,Chemistry ,organic chemicals ,Organic Chemistry ,folding, anion binding ,Ion pairs ,010402 general chemistry ,kidetiede ,01 natural sciences ,0104 chemical sciences ,Catalysis ,law.invention ,Folding (chemistry) ,X-ray ,Crystallography ,conformational change ,law ,katalyysi ,solution structures ,röntgenkristallografia - Abstract
Four distinct folding patterns were identified in two foldamer-type urea-thiourea catalysts bearing a basic dimethylamino unit by a combination of X-ray crystallography, solution NMR studies, and computational studies (DFT). These patterns are characterized by different intramolecular hydrogen bonding schemes that arise largely from different thiourea conformers. The free base forms of the catalysts are characterized by folds where the intramolecular hydrogen bonds between the urea and the thiourea units remain intact. In contrast, the catalytically relevant salt forms of the catalyst, where the catalyst forms an ion pair with the substrate or substrate analogues, appear in two entirely different folding patterns. With larger anions that mimic the dialkyl malonate substrates, the catalysts maintain its native fold both in the solid state and in solution, but with smaller halide anions (fluoride, chloride and bromide), the catalysts fold around the halide anion (anion receptor fold) and the intramolecular hydrogen bonds are disrupted. Titration of catalyst hexafluoroacetylacetonate salt with tetra-n-butylammonium chloride results in dynamic refolding of the catalyst from the native fold to the anion receptor fold. peerReviewed
- Published
- 2019
27. Host-guest Chemistry Meets Electrocatalysis: Cucurbit[6]uril on a Au Surface as Hybrid System in CO2 Reduction
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Andreas Wagner, Erwin Reisner, Nina Heidary, István Szabó, Tamás Földes, Khaleel Assaf, Steven Barrow, Khoa Ly, Nikolay Kornienko, Moritz Kuehnel, Edina Rosta, Ingo Zebger, Werner Nau, Oren Scherman, and Kamil Sokołowski
- Published
- 2019
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28. 1 Host-guest Chemistry Meets Electrocatalysis: Cucurbit[6]uril on a Au Surface as Hybrid System in CO2 Reduction
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Khaleel I. Assaf, Werner M. Nau, Khoa H. Ly, Moritz F. Kuehnel, Kamil Sokołowski, Nikolay Kornienko, István Szabó, Nina Heidary, Steven J. Barrow, Erwin Reisner, Edina Rosta, Oren A. Scherman, Ingo Zebger, Andreas Wagner, and Tamás Földes
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Reduction (complexity) ,Chemical engineering ,Chemistry ,Hybrid system ,Host–guest chemistry ,Electrocatalyst - Published
- 2019
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29. Frontispiece: Halogen Bonding Helicates Encompassing Iodonium Cations
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Alan Vanderkooy, Arvind Kumar Gupta, Tamás Földes, Sofia Lindblad, Andreas Orthaber, Imre Pápai, and Máté Erdélyi
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General Chemistry ,Catalysis - Published
- 2019
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30. Frontispiz: Halogen Bonding Helicates Encompassing Iodonium Cations
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Imre Pápai, Máté Erdélyi, Tamás Földes, Alan Vanderkooy, Sofia Lindblad, Arvind Kumar Gupta, and Andreas Orthaber
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Crystallography ,Halogen bond ,Chemistry ,General Medicine - Published
- 2019
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31. Strong structuring arising from weak cooperative O-H···π and C-H···O hydrogen bonding in benzene-methanol solution
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Camilla Di Mino, Andrew G. Seel, Adam J. Clancy, Thomas F. Headen, Támas Földes, Edina Rosta, Andrea Sella, and Neal T. Skipper
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Science - Abstract
Abstract Weak hydrogen bonds, such as O-H···π and C-H···O, are thought to direct biochemical assembly, molecular recognition, and chemical selectivity but are seldom observed in solution. We have used neutron diffraction combined with H/D isotopic substitution to obtain a detailed spatial and orientational picture of the structure of benzene-methanol mixtures. Our analysis reveals that methanol fully solvates and surrounds each benzene molecule. The expected O-H···π interaction is highly localised and directional, with the methanol hydroxyl bond aligned normal to the aromatic plane and the hydrogen at a distance of 2.30 Å from the ring centroid. Simultaneously, the tendency of methanol to form chain and cyclic motifs in the bulk liquid is manifest in a highly templated solvation structure in the plane of the ring. The methanol molecules surround the benzene so that the O-H bonds are coplanar with the aromatic ring while the oxygens interact with C-H groups through simultaneous bifurcated hydrogen bonds. This demonstrates that weak hydrogen bonding can modulate existing stronger interactions to give rise to highly ordered cooperative structural motifs that persist in the liquid phase.
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- 2023
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32. On the complex •OH/•O−-induced free radical chemistry of arylalkylamines with special emphasis on the contribution of the alkylamine side chain
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Erzsébet Takács, László Wojnárovits, Tamás Földes, György T. Balogh, Viktória Mile, László Szabó, and Tünde Tóth
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chemistry.chemical_compound ,010405 organic chemistry ,Chemistry ,Radical ,Arylalkylamine ,Side chain ,Organic chemistry ,Hydroxyl radical ,General Medicine ,010402 general chemistry ,01 natural sciences ,Biochemistry ,0104 chemical sciences - Abstract
A full account of the •OH-induced free radical chemistry of an arylalkylamine is given taking all the possible reaction pathways quantitatively into consideration. Such knowledge is indispensable w...
- Published
- 2017
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33. The structural properties of full-length annexin A11
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Erika F. Dudas, Mark D. Tully, Tamas Foldes, Geoff Kelly, Gian Gaetano Tartaglia, and Annalisa Pastore
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amyotrophic lateral sclerosis ,annexins ,intrinsically unstructured regions ,NMR ,small angle X-ray scattering ,structure ,Biology (General) ,QH301-705.5 - Abstract
Annexin A11 (ANXA11) is a calcium-dependent phospholipid-binding protein belonging to the annexin protein family and implicated in the neurodegenerative amyotrophic lateral sclerosis. Structurally, ANXA11 contains a conserved calcium-binding C-terminal domain common to all annexins and a putative intrinsically unfolded N-terminus specific for ANXA11. Little is known about the structure and functions of this region of the protein. By analogy with annexin A1, it was suggested that residues 38 to 59 within the ANXA11 N-terminus could form a helical region that would be involved in interactions. Interestingly, this region contains residues that, when mutated, may lead to clinical manifestations. In the present study, we have studied the structural features of the full-length protein with special attention to the N-terminal region using a combination of biophysical techniques which include nuclear magnetic resonance and small angle X-ray scattering. We show that the N-terminus is intrinsically disordered and that the overall features of the protein are not markedly affected by the presence of calcium. We also analyzed the 38–59 helix hypothesis using synthetic peptides spanning both the wild-type sequence and clinically relevant mutations. We show that the peptides have a remarkable character typical of a native helix and that mutations do not alter the behaviour suggesting that they are required for interactions rather than being structurally important. Our work paves the way to a more thorough understanding of the ANXA11 functions.
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- 2024
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34. Ionizing radiation induced degradation of monuron in dilute aqueous solution
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Shijun He, László Wojnárovits, Erzsébet Takács, Viktória Mile, Krisztina J. Kovács, Tamás Földes, and Imre Pápai
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Radiation ,Aqueous solution ,Radical ,Inorganic chemistry ,010501 environmental sciences ,010402 general chemistry ,Photochemistry ,Solvated electron ,01 natural sciences ,Chemical reaction ,0104 chemical sciences ,Chemical kinetics ,chemistry.chemical_compound ,Reaction rate constant ,chemistry ,Radiolysis ,Hydroxyl radical ,0105 earth and related environmental sciences - Abstract
The decomposition of monuron was investigated in dilute aqueous solutions using pulse radiolysis and γ-radiolysis in order to identify the intermediates and final products. The main reaction takes place between monuron and the hydroxyl radicals yielding hydroxycyclohexadienyl type radicals with a second order rate constant of (7.4±0.2)×10 9 mol −1 dm 3 s −1 . In ∙ OH reactions, the aminyl and phenoxyl radicals may also form. Dechlorination was observed in both hydroxyl radical and hydrated electron reactions. The ∙ OH induced dechlorination reactions are suggested to occur through OH substitution or phenoxyl radical formation. The rate of oxidation is very high in the presence of dissolved oxygen. Some of the results are also supported by quantum chemical calculations.
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- 2016
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35. Base-induced reversible H-2 addition to a single Sn(II) centre
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Roland C. Turnell-Ritson, Andrew E. Ashley, Tamás Földes, Robert Cooper, Stella S. Lee, Imre Pápai, Joshua S. Sapsford, Patricia A. Hunt, Engineering & Physical Science Research Council (EPSRC), and The Royal Society
- Subjects
Stereochemistry ,Chemistry, Multidisciplinary ,010402 general chemistry ,Hydrogen atom abstraction ,01 natural sciences ,Frustrated Lewis pair ,Reductive elimination ,Adduct ,BOND ACTIVATION ,ADDUCTS ,OXIDATIVE ADDITION ,Kinetic isotope effect ,PROTON-TRANSFER ,Lewis acids and bases ,AMMONIA ,Science & Technology ,010405 organic chemistry ,Chemistry ,LEWIS PAIR CHEMISTRY ,General Chemistry ,Oxidative addition ,Transition state ,0104 chemical sciences ,HYDROGEN ABSTRACTION ,REDUCTIVE ELIMINATION ,Physical Sciences ,DIHYDROGEN ,METAL ALKYLS - Abstract
A range of amines catalyse the oxidative addition (OA) of H2 to [(Me3Si)2CH]2Sn (1), forming [(Me3Si)2CH]2SnH2 (2). Experimental and computational studies point to ‘frustrated Lewis pair’ mechanisms in which 1 acts as a Lewis acid and involve unusual late transition states; this is supported by the observation of a kinetic isotope effect Image ID:c8sc03110j-t1.gif for Et3N. When DBU is used the energetics of H2 activation are altered, allowing an equilibrium between 1, 2 and adduct [1·DBU] to be established, thus demonstrating reversible oxidative addition/reductive elimination (RE) of H2 at a single main group centre.
- Published
- 2018
36. Evaluation of Concrete Elements with X-Ray Computed Tomography
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Tamás Földes, Éva Lublóy, and György L. Balázs
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Materials science ,medicine.diagnostic_test ,Field (physics) ,business.industry ,0211 other engineering and technologies ,Computed tomography ,02 engineering and technology ,Building and Construction ,021001 nanoscience & nanotechnology ,Optics ,Mechanics of Materials ,X ray computed ,021105 building & construction ,medicine ,General Materials Science ,Tomography ,0210 nano-technology ,Porosity ,business ,Civil and Structural Engineering - Abstract
Nowadays X-ray computed tomography (CT) imaging is being applied in the field of structural engineering. Scanning a concrete specimen by using X-ray tomography provides an insight into the ...
- Published
- 2018
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37. Base-induced reversible H
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Roland C, Turnell-Ritson, Joshua S, Sapsford, Robert T, Cooper, Stella S, Lee, Tamás, Földes, Patricia A, Hunt, Imre, Pápai, and Andrew E, Ashley
- Subjects
Chemistry - Abstract
A ‘frustrated Lewis pair’-type mechanism allows the first observation of reversible H2 addition to a single-site main-group complex., A range of amines catalyse the oxidative addition (OA) of H2 to [(Me3Si)2CH]2Sn (1), forming [(Me3Si)2CH]2SnH2 (2). Experimental and computational studies point to ‘frustrated Lewis pair’ mechanisms in which 1 acts as a Lewis acid and involve unusual late transition states; this is supported by the observation of a kinetic isotope effect for Et3N. When DBU is used the energetics of H2 activation are altered, allowing an equilibrium between 1, 2 and adduct [1·DBU] to be established, thus demonstrating reversible oxidative addition/reductive elimination (RE) of H2 at a single main group centre.
- Published
- 2018
38. Anionic N-heterocyclic carbenes by decarboxylation of sydnone-4-carboxylates
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Ana-Luiza Lücke, Tamás Földes, Sascha Wiechmann, Arnold Adam, Martin Nieger, Mimoza Gjikaj, Andreas Schmidt, Imre Pápai, Tyll Freese, and Department of Chemistry
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Thermogravimetric analysis ,RING ,Decarboxylation ,116 Chemical sciences ,chemistry.chemical_element ,Infrared spectroscopy ,Protonation ,Sydnone ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Medicinal chemistry ,chemistry.chemical_compound ,HYDROGEN-BOND ,CHEMISTRY ,Drug Discovery ,NUCLEOPHILIC CARBENES ,YLIDES ,010405 organic chemistry ,Hydrogen bond ,Organic Chemistry ,Mesoionic ,article ,CONJUGATED MESOMERIC BETAINES ,Mesoionic compound ,BORANE ADDUCTS ,LEWIS PAIR ,0104 chemical sciences ,chemistry ,13. Climate action ,IR spectroscopy ,ddc:540 ,CYCLOADDITION REACTIONS ,Lithium ,Mesoionic compound -- N-heterocyclic carbene -- Sydnone -- Decarboxylation -- IR spectroscopy ,SIGMA-SYDNONYL COMPLEXES ,N-heterocyclic carbene - Abstract
Unstable N-heterocyclic carbenes can be masked and stabilized as pseudo-cross-conjugated hetarenium-carboxylates which decarboxylate on warming. This study deals with the decarboxylation of carboxylates of mesoionic compounds to generate anionic N-heterocyclic carbenes. Lithium sydnone-4-carboxylates were therefore prepared via 4-bromosydnones by halogen-lithium exchange with nBuLi and subsequent treatment with carbon dioxide. Protonation gave the corresponding sydnone-4-carboxylic acids. Thermogravimetric measurements in addition to temperature dependent IR spectroscopy proved the decarboxylation of lithium sydnone-4-carboxylates and formation of the corresponding sydnone anions which can be represented as anionic N-heterocyclic carbenes. In DMSO-d6 solution, water favors the decarboxylation. Calculations have been performed to elucidate the mechanism of the decarboxylation in the absence and presence of water. (C) 2018 Elsevier Ltd. All rights reserved.
- Published
- 2018
39. Moisture-Tolerant Frustrated Lewis Pair Catalyst for Hydrogenation of Aldehydes and Ketones
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Tibor Soós, Attila Domján, Tamás Földes, Ádám Gyömöre, Imre Pápai, and Mária Bakos
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chemistry.chemical_compound ,Chemistry ,Organic chemistry ,General Chemistry ,Lewis acids and bases ,Borane ,Catalysis ,Frustrated Lewis pair - Abstract
In this paper, we report on the development of a bench-stable borane for frustrated Lewis pair catalyzed reduction of aldehydes, ketones, and enones. The deliberate fine-tuning of structural and electronic parameters of Lewis acid component and the choice of Lewis base provided for the first time, a moisture-tolerant FLP catalyst. Related NMR and DFT studies underpinned the unique behavior of this FLP catalyst and gave insight into the catalytic activity of the resulting FLP catalyst.
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- 2015
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40. Modellezett vízelöntés talajszerkezetre gyakorolt hatásának komputertomográfiás vizsgálata
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Tivadar M. Tóth, Norbert Gál, Andrea Farsang, and Tamás Földes
- Subjects
Soil Science ,Agronomy and Crop Science - Abstract
Kutatásunk során a belvíz talajszerkezetre gyakorolt hatását modelleztük háromszor ismételt nedvesítési–száradási ciklussal (WDC) négy darab, közel 10 ezer cm3 térfogatú, bolygatatlan talajmintán. A talajszerkezet változását vizsgáltuk komputertomográffal (CT), annak érdekében, hogy 1) a minták belso szerkezeti viszonyait láthatóvá tegyük, 2) a mintavételezéssel járó, zavaró falhatást kiküszöbölhessük és 3) a nedvesítési–száradási ciklusok után összehasonlító elemzést végezhessünk. A három nedvesedési-száradási ciklusból álló kísérlet során az eredendően talajhibától mentes, jó vízgazdálkodású, jó minoségű talajmintákat 880 × 880 µm2 pixel felbontásban felvételeztük komputertomográffal. Meghatároztuk a vizsgálat szempontjából reprezentatív elemi térfogatot, majd a talajoszlopokat e térfogati elemekre osztva elemeztük tovább. A CT-vel mért, sűrűséget jelző Hounsfield-egységeket átszámoltuk száraz térfogattömeg értékekre. A kísérlet eredményeként a bolygatatlan minták kismértékű térfogattömeg növekedését, valamint a nagyobb méretű pórusok arányának csökkenését figyeltük meg. Ezáltal igazoltuk, hogy talajművelési beavatkozás nélkül, a belvíz okozta tartós vízborítás alatt álló talajok szerkezeti degradációja a későbbiekben tovább növelheti a területen a belvízkockázatot.
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- 2015
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41. Wear Pattern, Dental Function, and Jaw Mechanism in the Late Cretaceous AnkylosaurHungarosaurus
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Tamás Földes, Attila Ősi, Richárd Tokai, and Paul M. Barrett
- Subjects
Histology ,Dental occlusion ,Dental Wear ,Wear pattern ,Hungarosaurus ,Anatomy ,Biology ,biology.organism_classification ,Cretaceous ,Mechanism (engineering) ,stomatognathic diseases ,Scelidosaurus ,stomatognathic system ,Euoplocephalus ,Mechanism (sociology) ,Ecology, Evolution, Behavior and Systematics ,Biotechnology - Abstract
Feeding in thyreophoran dinosaurs is poorly understood. Although the group existed for over 130 million years, only the Early Jurassic basal thyreophoran Scelidosaurus harrisonii and the Late Cretaceous ankylosaurid Euoplocephalus tutus have been studied from this perspective in detail. In contrast to the earlier, conservative hypothesis of a simple "orthal pulping" feeding mode with no or limited tooth-tooth contact, recent studies have demonstrated precise dental occlusion with differing jaw mechanisms in these two species. Here, we describe the first detailed study of feeding related characters in a nodosaurid ankylosaur, Hungarosaurus tormai, from the Late Cretaceous of Hungary. Dental wear patterns comprising small, apical, and low-angled facets on the maxillary and steep, extended, and bowl-like facets on the dentary teeth reveal sophisticated tooth-tooth contact in this basal nodosaurid. The presence of two different scratch generations (vertical and low-angled) on the dentary teeth unambiguously demonstrate a multiphasic powerstroke, which is further supported by the morphology of the quadrate-articular and mandibular symphyseal joints and by the architecture of the reconstructed jaw adductors. Chewing started with an initial slicing phase associated with orthal movement that was followed by a retractive powerstroke with significant occlusal contact. Because of the curved tooth rows, these movements were probably facilitated by some mediolateral translation and/or axial rotation of the mandibles to produce precise shearing along the whole tooth row. These results demonstrate that complex jaw mechanisms and dental occlusion were more widespread among thyreophorans than thought previously and that palinal movement was present in at least two ankylosaurian lineages.
- Published
- 2014
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42. Computed tomography analysis and visual inspection of asphalt core samples
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Kristóf Kapitány, Árpád Barsi, Dávid Ambrus, Éva Lublóy, and Tamás Földes
- Subjects
Core (optical fiber) ,Visual inspection ,medicine.diagnostic_test ,Asphalt ,Acoustics ,medicine ,Computed tomography ,Geology - Published
- 2014
- Full Text
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43. On the complex
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László, Szabó, Viktória, Mile, Tünde, Tóth, György T, Balogh, Tamás, Földes, Erzsébet, Takács, and László, Wojnárovits
- Subjects
Electron Transport ,Kinetics ,Free Radicals ,Hydroxyl Radical ,Water ,Amines ,Hydrogen-Ion Concentration ,Pulse Radiolysis ,Oxidation-Reduction - Abstract
A full account of the
- Published
- 2017
44. Organocatalysts Fold to Generate an Active Site Pocket for the Mannich Reaction
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Ádám Madarász, Antti J. Neuvonen, Tamás Földes, Petri M. Pihko, and Imre Pápai
- Subjects
inorganic chemicals ,organocatalysis, bifunctional, cooperativity, mechanism, kinetics, computations ,Tertiary amine ,cooperativity ,Imine ,mechanism ,010402 general chemistry ,01 natural sciences ,Catalysis ,chemistry.chemical_compound ,Hammett equation ,Mannich reaction ,Organic chemistry ,organocatalysis ,ta116 ,biology ,010405 organic chemistry ,Chemistry ,Foldamer ,Active site ,General Chemistry ,Combinatorial chemistry ,computations ,0104 chemical sciences ,bifunctional ,Malonate ,kinetics ,Organocatalysis ,biology.protein - Abstract
Catalysts containing urea, thiourea and tertiary amine groups fold into a three-dimensional organized structure in solution both in the absence as well as in the presence of substrates or substrate analogues, as indicated by solution NMR and computational studies. These foldamer catalysts promote Mannich reactions with both aliphatic and aromatic imines and malonate esters. Hammett plot and secondary kinetic isotope effects provide evidence for the C-C bond forming event as the turnoverlimiting step of the Mannich reaction. Computational studies suggest two viable pathways for the C-C bond formation step, differing in the activation modes of the malonate and imine substrates. The results show that the foldamer catalysts may promote C-C bond formation with an aliphatic substrate bearing a cyclohexyl group by enhanced binding of the substrates by dispersion interactions, but these interactions are largely absent with a simpler catalyst. Additional control experiments demonstrate the ability of simple thiourea catalysts to promote competing side reactions with aliphatic substrates, such as reversible covalent binding of the thiourea sulfur to the imine which deactivates the catalyst, and imine-to-enamine isomerization reactions. In foldamer catalysts, the nucleophilicity of sulfur is reduced, which prevents catalyst deactivation. The results indicate that the improved catalytic performance of foldamer catalysts in Mannich reactions may not be due to cooperative effects of intramolecular hydrogen bonds, but simply due to the presence of the folded structure that provides an active site pocket, accommodating the substrate and at the same time impeding undesirable side reactions. peerReviewed
- Published
- 2017
45. Stereocontrol in Diphenylprolinol Silyl Ether Catalyzed Michael Additions : Steric Shielding or Curtin-Hammett Scenario?
- Author
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Imre Pápai, Ádám Madarász, Zoltán Dobi, Ágnes Révész, Andrea Hamza, Péter Nagy, Petri M. Pihko, Tamás Földes, and Szilárd Varga
- Subjects
Steric effects ,mechanism ,Protonation ,010402 general chemistry ,01 natural sciences ,Biochemistry ,DFT ,Catalysis ,Colloid and Surface Chemistry ,Computational chemistry ,Organic chemistry ,Reactivity (chemistry) ,organocatalysis ,ta116 ,stereocontrol ,010405 organic chemistry ,Chemistry ,General Chemistry ,0104 chemical sciences ,Catalytic cycle ,kinetics ,Electrophile ,Michael reaction ,Stereoselectivity ,ESI-MS screening - Abstract
The enantioselectivity of amine-catalyzed reactions of aldehydes with electrophiles is often explained by simple steric arguments emphasizing the role of the bulky group of the catalyst that prevents the approach of the electrophile from the more hindered side. This standard steric shielding model has recently been challenged by the discovery of stable downstream intermediates, which appear to be involved in the rate-determining step of the catalytic cycle. The alternative model, referred to as Curtin-Hammett scenario of stereocontrol, assumes that the enantioselectivity is related to the stability and reactivity of downstream intermediates. In our present computational study, we examine the two key processes of the catalytic Michael reaction between propanal and β-nitrostyrene that are relevant to the proposed stereoselectivity models, namely the C-C bond formation and the protonation steps. The free energy profiles obtained for the pathways leading to the enantiomeric products suggest that the rate- and stereo-determining steps are not identical as implied by the previous models. The stereoselectivity can be primarily controlled by C-C bond formation even though the reaction rate is dictated by the protonation step. This kinetic scheme is consistent with all observations of experimental mechanistic studies including those of mass spectrometric back reaction screening experiments, which reveal a mismatch between the stereoselectivity of the back and the forward reactions. peerReviewed
- Published
- 2017
46. Nuclear spin hyperpolarization with ansa-aminoboranes : a metal-free perspective for parahydrogen-induced polarization
- Author
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Ville-Veikko Telkki, Igor V. Koptyug, Kristina Sorochkina, Tamás Földes, Konstantin Chernichenko, Imre Pápai, Bianka Kótai, Vladimir V. Zhivonitko, Timo Repo, Department of Chemistry, and Timo Repo / Principal Investigator
- Subjects
HYDROGEN ACTIVATION ,Stereochemistry ,116 Chemical sciences ,CATALYZED HYDROGENATION ,General Physics and Astronomy ,010402 general chemistry ,Spin isomers of hydrogen ,01 natural sciences ,Chemical reaction ,Induced polarization ,114 Physical sciences ,Frustrated Lewis pair ,HETEROARENES ,Computational chemistry ,Molecule ,Physical and Theoretical Chemistry ,Polarization (electrochemistry) ,TWEEZERS ,010405 organic chemistry ,Chemistry ,FRUSTRATED-LEWIS-PAIR ,NMR ,REACTIVITY ,0104 chemical sciences ,MOLECULAR-HYDROGEN ,BORYLATION ,Chemical equilibrium ,DIHYDROGEN ,Molecular tweezers - Abstract
The parahydrogen-induced polarization (PHIP) phenomenon, observed when parahydrogen is used in H-2 addition processes, provides a means for substantial NMR signal enhancements and mechanistic studies of chemical reactions. Commonly, noble metal complexes are used for parahydrogen activation, whereas metal-free activation is rare. Herein, we report a series of unimolecular metal-free frustrated Lewis pairs based on an ansa-aminoborane (AAB) moiety in the context of PHIP. These molecules, which have a "molecular tweezers'' structure, differ in their substituents at the boryl site (-H, -Ph, -o-iPr-Ph, and -Mes). PHIP effects were observed for all the AABs after exposing their solutions to parahydrogen in a wide temperature range, and experimental measurements of their kinetic and thermodynamic parameters were performed. A theoretical analysis of their nuclear spin polarization effects is presented, and the roles of chemical exchange, chemical equilibrium and spin dynamics are discussed in terms of the key dimensionless parameters. The analysis allowed us to formulate the prerequisites for achieving strong polarization effects with AAB molecules, which can be applied for further design of efficient metal-free tweezers-like molecules for PHIP. Mechanistic (chemical and physical) aspects of the observed effects are discussed in detail. In addition, we performed quantum chemical calculations, which confirmed that the J-coupling between the parahydrogen-originated protons in AAB-H-2 molecules is mediated through dihydrogen bonding.
- Published
- 2016
47. Geodynamic implications of flattened tabular equigranular textured peridotites from the Bakony-Balaton Highland Volcanic Field (Western Hungary)
- Author
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Csaba Szabó, Károly Hidas, György Falus, István Kovács, Tamás Földes, and Péter János Szabó
- Subjects
Peridotite ,Basalt ,Olivine ,Geochemistry ,Geodynamics ,engineering.material ,Mantle (geology) ,Tectonics ,Geophysics ,Equigranular ,engineering ,Xenolith ,Geology ,Earth-Surface Processes - Abstract
Peridotite xenoliths showing unusual tabular equigranular textures (addressed as flattened tabular equigranular) were found in Neogene alkali basalts from the Bakony-Balaton Highland Volcanic Field (Western Hungary), Carpathian-Pannonian Region. The olivines have a characteristic crystallographic preferred orientation (CPO) with [0 1 0]-axes perpendicular to the foliation and the [1 0 0]- and [0 0 1]-axes forming a continuous girdle in the foliation plane. Contrarily, the CPO pattern of orthopyroxene is much more scattered, although a single maximum can be observed in [0 0 1] axes subparallel to the plane of foliation. In case of olivine, the activation of (0 1 0)[1 0 0] and also probably (0 1 0)[0 0 1] is suggested. The deformation micro-mechanisms of orthopyroxenes are suggested to be a combination of intracrystalline glide on the (1 0 0)[0 0 1] system and some kind of other mechanism resulting in quite scattered patterns. We suggest that the unusual orientation patterns of olivines and orthopyroxenes are the result of the complex tectonic evolution of the region. The flattened tabular equigranular xenoliths represent a structural domain within the subcontinental lithospheric mantle beneath the volcanic field with particular seismic characteristics. The occurrence of flattened domains in the upper mantle may considerably influence the percolation and residence time of the mantle melts and fluids, which could promote or prevent melt/wall-rock interaction.
- Published
- 2007
- Full Text
- View/download PDF
48. Origin of radon concentration of Csalóka Spring in the Sopron Mountains (West Hungary)
- Author
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Ákos Horváth, Kálmán Török, Tamás Földes, and Ágnes Freiler
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Water Pollutants, Radioactive ,010504 meteorology & atmospheric sciences ,Soil test ,Health, Toxicology and Mutagenesis ,chemistry.chemical_element ,Mineralogy ,Radon ,010502 geochemistry & geophysics ,01 natural sciences ,Radium ,Soil ,Radiation Monitoring ,Spring (hydrology) ,Environmental Chemistry ,Waste Management and Disposal ,Groundwater ,0105 earth and related environmental sciences ,geography ,Hungary ,geography.geographical_feature_category ,General Medicine ,Pollution ,Spectrometry, Gamma ,chemistry ,Clastic rock ,Soil water ,Scintillation Counting ,Seasons ,Geology ,Gneiss - Abstract
We examined the Csaloka Spring, which has the highest radon concentration in the Sopron Mountains (West Hungary) (, yearly average of 227 ± 10 Bq L(-1)). The main rock types here are gneiss and micaschist, formed from metamorphism of former granitic and clastic sedimentary rocks respectively. The aim of the study was to find a likely source of the high radon concentration in water. During two periods (2007-2008 and 2012-2013) water samples were taken from the Csaloka Spring to measure its radon concentration (from 153 ± 9 Bq L(-1) to 291 ± 15 Bq L(-1)). Soil and rock samples were taken within a 10-m radius of the spring from debrish and from a deformed gneiss outcrop 500 m away from the spring. The radium activity concentration of the samples (between 24.3 ± 2.9 Bq kg(-1) and 145 ± 6.0 Bq kg(-1)) was measured by gamma-spectroscopy, and the specific radon exhalation was determined using radon-chamber measurements (between 1.32 ± 0.5 Bq kg(-1) and 37.1 ± 2.2 Bq kg(-1)). Based on these results a model calculation was used to determine the maximum potential radon concentration, which the soil or the rock may provide into the water. We showed that the maximum potential radon concentration of these mylonitic gneissic rocks (cpot = 2020 Bq L(-1)) is about eight times higher than the measured radon concentration in the water. However the maximum potential radon concentration for soils are significantly lower (41.3 Bq L(-1)) Based on measurements of radon exhalation and porosity of rock and soil samples we concluded that the source material can be the gneiss rock around the spring rather than the soil there. We determined the average radon concentration and the time dependence of the radon concentration over these years in the spring water. We obtained a strong negative correlation (-0.94 in period of 2007-2008 and -0.91 in 2012-2013) between precipitation and radon concentration.
- Published
- 2015
49. Application of medical Computer Tomograph measurements to 3D reservoir characterization
- Author
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Kinga Hips, Imre Repa, Tamás Földes, Balázs Kiss, Gizella B. Árgyelán, and Péter Bogner
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Hounsfield scale ,Well logging ,Reservoir modeling ,Core sample ,Mineralogy ,Geology ,Tomography ,Saturation (chemistry) ,Porosity ,Effective porosity - Abstract
This paper summarizes the benefits of non-destructive core measurements by medical Computer Tomograph (CT) in integrated 3D reservoir characterization. A direct relationship exists between CT measurements and petrography, conventional petrophysical analysis and well logs. Based on CT measurements the internal structure of core samples, and the geometry of framework constituents, porosity type and pore size distribution, as well as fracturing, can be described. There is a close connection between distribution of the Hounsfield Unit of CT measurements and pore size distribution detected by conventional petrophysical analysis. Calculation of effective porosity from petroleum saturation experiments provides a new way to determine the porosity of the whole core sample. Beside the description of reservoir parameters, the results of CT measurements can be extended over the surrounding area of the well. By matching the cylinder maps of CT to FMI images and other well logs the original position of the core sample...
- Published
- 2004
- Full Text
- View/download PDF
50. A mutrágyázás és elemi kén adagolás hatása a talaj kémhatására és felveheto SO42--tartalmára
- Author
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P. Szakál, R. Schmidt, Tamás Földes, and Renátó Kalocsai
- Subjects
Soil Science ,Agronomy and Crop Science - Abstract
A szerzok laboratóriumi talajérleléses kísérletet állítottak be meszes Duna öntéstalajon különbözo elemi kén dózisok (0,1 g; 1,0 g; 2,5 g; 5,0 g; illetve 10 g/tenyészedény, azaz 50, 500, 1250, 2500 és 5000 kg ha-1) talajbeli oxidációjának vizsgálata céljából mutrágyázatlan, illetve NPK-mutrágyázott körülmények között. A 84 napos inkubációs periódus elteltével a talajok pH(H2O),pH(KCl) értékeit, valamint a talajokban mérheto, vízoldható szulfátion-koncentrációt elemezték. Az eredményeket varianciaanalízis és regressziószámítás segítségével értékelték. Az elvégzett vizsgálatok alapján megállapították, hogy a mutrágyázatlan talajok különbözo elemi kén adagok hatására kialakult pH-értékei szignifikáns különbséget nem mutattak, míg a mutrágyázott kezelések esetén az emelkedo kéndózisok hatására bekövetkezo pH-csökkenés 0,1 %-os szignifikancia szinten általánosnak bizonyult. A talajok felveheto szulfátion-koncentrációja vélhetoen a kezelések, valamint a talajok mikrobiális tevékenységének hatására minden esetben nott. Az elemi kén adagok, valamint a talajok mért szulfátion-koncentrációinak 0,1 %-os szignifikancia szinten érvényesülo összefüggései azonban a talaj pH-értékeinek alakulásával bizonyítható kapcsolatot nem mutattak. A látszólagos ellentmondás hátterében számos biológiai, fizikai és kémiai tényezo állhat, melyek meghatározása a kapott összefüggések tisztázása szempontjából további vizsgálatok szükségességét veti fel.
- Published
- 2003
- Full Text
- View/download PDF
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