6,451 results on '"Tannock IF"'
Search Results
2. Promoting a more diverse and inclusive research workforce through the research scholars program
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Schoenberg, Nancy E., Robinson, Jimmy, McGladrey, Margaret, Cassis, Lisa A., Conwell, Darwin, Pearson, Kevin J., Tannock, Lisa R., Wilcock, Donna, and White, Stephanie
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- 2024
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3. Outcome of Triple Negative Breast Cancer(TNBC) as compared to other breast cancers in Bir Hospital, National Academy of Medical Sciences
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Anip Joshi, Sandhya Chapagain, Sangita Shrestha, Niliza Shakya, Prajjwol Luitel, Ishwari Rajbhandari, Sujan Shrestha, Jocelyn Lippey, Deependra Singh, Prathiksha Karthikeyan, Ian Tannock, and Christopher Pyke
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Breast cancer ,outcome ,TNBC ,Surgery ,RD1-811 - Abstract
Introduction: In Nepal, breast cancer is the second most common cancer accounting for a large number of deaths.The subtype Triple-negative breast cancer (TNBC) is linked to poor prognosis and is characterized by the absence of estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor-2 (HER2). This study describes the outcome of women with TNBC as compared to other breast cancers in Bir Hospital in Nepal. Methods: This was a cross-sectional study conducted in Bir Hospital, National Academy of Medical Sciences. The breast cancer data in Department of Surgery and Department of Oncology were collected from July 2021 to June 2024. The study data on demographic details, clinical findings, radiological and pathological investigations, operative procedures, neoadjuvant/adjuvant therapy, surgical and oncological outcomeswere collected. The study approval was taken from Institutional Review Board of National Academy of Medical Sciences. Results: There were 72 breast cancer patientsout of which 10 (13.8 %) were TNBC. Majority of the cases (70%) underwent modified radical mastectomy and 60% of them had received neoadjuvant therapy in TNBC cases. One out of 10 had positive margin post mastectomy. The proportion of TNBC patients with postoperative wound infection, seroma and flap necrosis were 10% each. The mean lymph node positivity was less in TNBC group as compared to other breast cancers.There was one recurrence, one metastasis and no mortality till one year follow up. Conclusion: The surgical outcome was satisfactory and with neo-adjuvant, surgery and adjuvant therapy, there is less tumor recurrence and satisfactory disease free survival and overall survival.
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- 2024
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4. The human gut metacommunity as a conceptual aid in the development of precision medicine
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Gerald W. Tannock
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metacommunity ,microbiome ,microbiota ,precision medicine ,symbiosis ,dysbiosis ,Microbiology ,QR1-502 - Abstract
Human gut microbiomes (microbiotas) are highly individualistic in taxonomic composition but nevertheless are functionally similar. Thus, collectively, they comprise a “metacommunity.” In ecological terminology, the assembly of human gut microbiomes is influenced by four processes: selection, speciation, drift, and dispersal. As a result of fortuitous events associated with these processes, individual microbiomes are taxonomically “tailor-made” for each host. However, functionally they are “off-the-shelf” because of similar functional outputs resulting from metabolic redundancy developed in host-microbe symbiosis. Because of this, future microbiological and molecular studies of microbiomes should emphasize the metabolic interplay that drives the human gut metacommunity and that results in these similar functional outputs. This knowledge will support the development of remedies for specific functional dysbioses and hence provide practical examples of precision medicine.
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- 2024
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5. A 1.46-2.48 $\mu$m Spectroscopic Atlas of a T6 Dwarf (1060 K) Atmosphere with IGRINS: First Detections of H$_2$S and H$_2$, and Verification of H$_2$O, CH$_4$, and NH$_3$ Line Lists
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Tannock, Megan E., Metchev, Stanimir, Hood, Callie E., Mace, Gregory N., Fortney, Jonathan J., Morley, Caroline V., Jaffe, Daniel T., and Lupu, Roxana
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Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Earth and Planetary Astrophysics - Abstract
We present Gemini South/IGRINS observations of the 1060 K T6 dwarf 2MASS J08173001$-$6155158 with unprecedented resolution ($R\equiv\lambda/\Delta\lambda=45\,000$) and signal-to-noise ratio (SNR > 200) for a late-type T dwarf. We use this benchmark observation to test the reliability of molecular line lists used up-to-date atmospheric models. We determine which spectroscopic regions should be used to estimate the parameters of cold brown dwarfs and, by extension, exoplanets. We present a detailed spectroscopic atlas with molecular identifications across the $H$ and $K$ bands of the near-infrared. We find that water (H$_2$O) line lists are overall reliable. We find the most discrepancies amongst older methane (CH$_4$) line lists, and that the most up-to-date CH$_4$ line lists correct many of these issues. We identify individual ammonia (NH$_3$) lines, a hydrogen sulfide (H$_2$S) feature at 1.5900 $\mu$m, and a molecular hydrogen (H$_2$) feature at 2.1218 $\mu$m. These are the first unambiguous detections of H$_2$S and H$_2$ absorption features in an extra-solar atmosphere. With the H$_2$ detection, we place an upper limit on the atmospheric dust concentration of this T6 dwarf: at least 500 times less than the interstellar value, implying that the atmosphere is effectively dust-free. We additionally identify several features that do not appear in the model spectra. Our assessment of the line lists is valuable for atmospheric model applications to high-dispersion, low-SNR, high-background spectra, such as an exoplanet around a star. We demonstrate a significant enhancement in the detection of the CH$_4$ absorption signal in this T6 dwarf with the most up-to-date line lists., Comment: 45 pages, 63 figures, 5 tables, Accepted to MNRAS
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- 2022
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6. Cognitive impairment in adolescent and young adult cancer patients: Pre‐treatment findings of a longitudinal study
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Chan, Alexandre, Cheng, Ivy, Wang, Claire, Tan, Chia Jie, Toh, Yi Long, Ng, Ding Quan, Koh, Yong Qin, Zhou, Hanzhang, Foo, Koon Mian, Chan, Raymond Javan, Ho, Han Kiat, Chew, Lita, Farid, Mohamad, and Tannock, Ian
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Paediatrics ,Biomedical and Clinical Sciences ,Neurosciences ,Clinical Research ,Pediatric ,Rare Diseases ,Behavioral and Social Science ,Cancer ,Humans ,Young Adult ,Adolescent ,Adult ,Brain-Derived Neurotrophic Factor ,Longitudinal Studies ,Quality of Life ,Cohort Studies ,Cognitive Dysfunction ,Neoplasms ,adolescent and young adult ,brain-derived neurotrophic factor ,cancer ,cancer-related cognitive impairment ,cognition ,inflammatory cytokines ,Biochemistry and Cell Biology ,Oncology and Carcinogenesis ,Oncology and carcinogenesis - Abstract
BackgroundThere is little information about cancer-related cognitive impairment (CRCI) in adolescent and young adults (AYA, 15-39 years old) due to its rare incidence. Here, we present the pre-treatment (before chemotherapy or radiotherapy) evaluation of cognitive function and ability of AYA with cancer (AYAC) in a multicentered cohort study.MethodsNewly diagnosed AYAC and age-matched healthy controls (HC) were recruited between 2018 and 2021. The primary outcome was the comparison of pre-treatment cognitive impairment defined as 2 standard deviations (SDs) below the HC on ≥1 cognitive test, or >1.5 SDs below on ≥2 tests using CANTAB® between AYAC and HC. Secondary outcomes included self-perceived cognitive ability assessed by FACT-Cog v3 and biomarkers (inflammatory cytokines and brain-derived neurotrophic factor [BDNF]).ResultsWe recruited 74 AYAC (median age = 34) and 118 HC (median age = 32). On objective cognitive testing, we observed three times more AYAC patients performed poorly on at least 2 cognitive tests compared to HC (40.5% vs. 13.6%, p
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- 2023
7. Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies.
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Kennedy, Katherine, de Goffau, Marcus, Perez-Muñoz, Maria, Arrieta, Marie-Claire, Bäckhed, Fredrik, Bork, Peer, Braun, Thorsten, Bushman, Frederic, Dore, Joel, de Vos, Willem, Earl, Ashlee, Eisen, Jonathan, Elovitz, Michal, Ganal-Vonarburg, Stephanie, Gänzle, Michael, Garrett, Wendy, Hall, Lindsay, Hornef, Mathias, Huttenhower, Curtis, Konnikova, Liza, Lebeer, Sarah, Macpherson, Andrew, Massey, Ruth, McHardy, Alice, Koren, Omry, Lawley, Trevor, Ley, Ruth, OMahony, Liam, OToole, Paul, Pamer, Eric, Parkhill, Julian, Raes, Jeroen, Rattei, Thomas, Salonen, Anne, Segal, Eran, Segata, Nicola, Shanahan, Fergus, Sloboda, Deborah, Smith, Gordon, Sokol, Harry, Spector, Tim, Surette, Michael, Tannock, Gerald, Walker, Alan, Yassour, Moran, and Walter, Jens
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Animals ,Female ,Humans ,Pregnancy ,Amniotic Fluid ,Biomass ,Mammals ,Microbiota ,Placenta ,Fetus ,DNA Contamination ,Reproducibility of Results - Abstract
Whether the human fetus and the prenatal intrauterine environment (amniotic fluid and placenta) are stably colonized by microbial communities in a healthy pregnancy remains a subject of debate. Here we evaluate recent studies that characterized microbial populations in human fetuses from the perspectives of reproductive biology, microbial ecology, bioinformatics, immunology, clinical microbiology and gnotobiology, and assess possible mechanisms by which the fetus might interact with microorganisms. Our analysis indicates that the detected microbial signals are likely the result of contamination during the clinical procedures to obtain fetal samples or during DNA extraction and DNA sequencing. Furthermore, the existence of live and replicating microbial populations in healthy fetal tissues is not compatible with fundamental concepts of immunology, clinical microbiology and the derivation of germ-free mammals. These conclusions are important to our understanding of human immune development and illustrate common pitfalls in the microbial analyses of many other low-biomass environments. The pursuit of a fetal microbiome serves as a cautionary example of the challenges of sequence-based microbiome studies when biomass is low or absent, and emphasizes the need for a trans-disciplinary approach that goes beyond contamination controls by also incorporating biological, ecological and mechanistic concepts.
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- 2023
8. Comparison of standard-dose and reduced-dose treatment of metastatic prostate cancer with enzalutamide, apalutamide or darolutamide: a rapid review
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Ananya Choudhury, Ian F Tannock, Mohini Varughese, Kimberley Reeves, Duncan C Gilbert, and Hannah Louise Bromley
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Objective To review the efficacy and safety of low-dose versus standard-dose enzalutamide, apalutamide or darolutamide treatment for metastatic prostate cancer.Methods and analysis Keyword searches in MEDLINE and EMBASE up to 1 June 2023, with forward and backward citation searches of potentially relevant studies. Studies were included if primary outcome data were reported for patients with metastatic prostate cancer who had received reduced doses of enzalutamide, apalutamide or darolutamide. Searches were limited to original full-text and English-language studies. Key outcomes included overall survival (OS), progression-free survival (PFS), prostate-specific antigen response and treatment-related adverse events. The review was performed in accordance with Cochrane Rapid Reviews Methods Group guidelines.Results Ten studies were identified that met the eligibility criteria: five phase I studies, two post-hoc analyses of phase III trials and three retrospective analyses. No consistent association between OS, PFS and drug dose was identified. Fewer severe treatment-related adverse events were observed at lower drug doses.Conclusion This review provides evidence that enzalutamide, apalutamide or darolutamide could be given at a lower than the standard recommended dose without loss of antitumour activity. A prospective near-equivalence randomised trial should be undertaken to compare registered and lower doses of these agents.PROSPERO registration number CRD42023440371.
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- 2024
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9. The tyranny of non-inferiority trials
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Tannock, Ian F, Buyse, Marc, De Backer, Mickael, Earl, Helena, Goldstein, Daniel A, Ratain, Mark J, Saltz, Leonard B, Sonke, Gabe S, and Strohbehn, Garth W
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- 2024
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10. Promoting a more diverse and inclusive research workforce through the research scholars program
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Nancy E. Schoenberg, Jimmy Robinson, Margaret McGladrey, Lisa A. Cassis, Darwin Conwell, Kevin J. Pearson, Lisa R. Tannock, Donna Wilcock, and Stephanie White
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Diversity ,Underrepresentation ,Faculty development ,Mentoring ,Social networking ,Special aspects of education ,LC8-6691 ,Medicine - Abstract
Abstract Background Novel and comprehensive approaches are needed to address shortcomings in the diversity and inclusiveness of the scientific workforce. In response to this need and informed by multiple programs and data sources, we created the Research Scholars Program (RSP). The RSP is a yearlong program for early-career faculty with an overall objective to overcome barriers to the academic success, retention, progression, and promotion of groups underrepresented in biomedical and behavioral research. The goal of the RSP is to increase research confidence and productivity, build a supportive research community, and reduce isolation by providing personal and group research enrichment to junior faculty through professional development, mentorship, and networking. Methods We adapted evidence-based approaches for our institutional context and vetted the RSP across our campus. The resulting RSP consists of three main elements: (1) five levels of Mosaic Mentorship; (2) group and tailored professional development programming; and (3) scientific and social networking. To determine the potential of the RSP to improve research confidence critical to success, we used a modified shortened version of the Clinical Research Appraisal Inventory (CRAI-12) to assess participants’ confidence in performing a variety of research tasks before and after program participation. We collected information about retention, promotion, and grants submitted and awarded. Additionally, we conducted semi-structured exit interviews with each scholar after program participation to identify programmatic strengths and areas for improvement. Data for Cohorts 1 and 2 (N = 12) were analyzed. Results Our assessment finds, with one exception, increasing confidence in participants’ research skills across all items, ranging from 0.4 (4.7%) to 2.6 (40.6%). In their exit interviews, the Research Scholars (RS) described their improved productivity and increased sense of belonging and support from others. Research Scholars noted numerous components of the RSP as strengths, including the Mosaic Mentorship model, professional development programming, and opportunities for both informal and formal interactions. Respondents identified time pressure, a lack of feedback, and unclear expectations of the various mentorship roles as areas in which the program can improve. Conclusion Preliminary findings indicate that the RSP is successful in building the research confidence of underrepresented and disadvantaged early-career faculty. While this report focuses on the development and protocol of the RSP, additional cohorts and data will provide the evidence base to support dissemination as a national model of research professional development. Such programming is critical to ensure sustainable support structures, institutional networks, infrastructure, and resources that will improve discovery and equity through inclusive excellence.
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- 2024
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11. Culture Workers against Big Oil: The Importance of Labor Education in Fighting The Climate Crisis
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Stuart Tannock
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This article argues for the importance of labor education in fighting the climate crisis, a vital form of education too often overlooked in the climate movement. Drawing on a case study of unionized culture workers in the United Kingdom, the article seeks to show the distinctive embedded nature of labor education. Success of labor education on the climate crisis hinges not so much on a particular pedagogy or curriculum in any one classroom setting, but on the ways in which a range of formal and informal educational actors and spaces work together across the labor and environmental movements, as part of a mobilizing project that seeks to link worker interests directly to the climate crisis, and identify actions that workers can take to address the crisis effectively. Labor education has a central role to play in ensuring a just transition in the move away from a fossil fuel based economy.
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- 2023
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12. Adaptation Strategies: Labour Education, Climate Crisis and the UK Trade Union Movement
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Stuart Tannock
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Social Sciences - Abstract
A growing number of climate activists and scholars argue that an effective climate movement needs the involvement of the trade union movement, to be able to push forward the radical social transformations required to address the global climate crisis. This article analyses the recent focus on climate adaptation in labour education and action by trade unions in the UK. Climate adaptation is inherently political, and this article analyses the agendas driving the turn to adaptation, the possibilities that adaptation strategies open up, and some of their risks and limitations. Climate adaptation strategies, the article argues, could represent an important step forward for developing effective labour education and action on the climate crisis, but only if these strategies enable unions to mobilize a focus on the root causes of the crisis, agitate for structural change, and attend to the global and not just local concerns of worker, social and climate justice.
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- 2024
13. Retraction notice to 'Role of Autophagy as a Survival Mechanism for Hypoxic Cells in Tumors' [Neoplasia 18 (2016) 347- 355/201]
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Qian Tan, Marina Wang, Man Yu, Junyan Zhang, Robert G. Bristow, Richard P. Hill, and Ian F. Tannock
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2024
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14. The Lancet Commission on prostate cancer: planning for the surge in cases
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James, Nicholas D, Tannock, Ian, N'Dow, James, Feng, Felix, Gillessen, Silke, Ali, Syed Adnan, Trujillo, Blanca, Al-Lazikani, Bissan, Attard, Gerhardt, Bray, Freddie, Compérat, Eva, Eeles, Ros, Fatiregun, Omolara, Grist, Emily, Halabi, Susan, Haran, Áine, Herchenhorn, Daniel, Hofman, Michael S, Jalloh, Mohamed, Loeb, Stacy, MacNair, Archie, Mahal, Brandon, Mendes, Larissa, Moghul, Masood, Moore, Caroline, Morgans, Alicia, Morris, Michael, Murphy, Declan, Murthy, Vedang, Nguyen, Paul L, Padhani, Anwar, Parker, Charles, Rush, Hannah, Sculpher, Mark, Soule, Howard, Sydes, Matthew R, Tilki, Derya, Tunariu, Nina, Villanti, Paul, and Xie, Li-Ping
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- 2024
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15. Antisense oligonucleotide targeting hepatic Serum Amyloid A limits the progression of angiotensin II-induced abdominal aortic aneurysm formation
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Shridas, Preetha, Ji, Ailing, Trumbauer, Andrea C., Noffsinger, Victoria P., Meredith, Luke W., de Beer, Frederick C., Mullick, Adam E., Webb, Nancy R., Karounos, Dennis G., and Tannock, Lisa R.
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- 2024
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16. Weather on Other Worlds. V. The Three Most Rapidly Rotating Ultra-Cool Dwarfs
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Tannock, Megan E., Metchev, Stanimir, Heinze, Aren, Miles-Páez, Paulo A., Gagné, Jonathan, Burgasser, Adam, Marley, Mark S., Apai, Dániel, Suárez, Genaro, and Plavchan, Peter
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Astrophysics - Solar and Stellar Astrophysics - Abstract
We present the discovery of rapid photometric variability in three ultra-cool dwarfs from long-duration monitoring with the Spitzer Space Telescope. The T7, L3.5, and L8 dwarfs have the shortest photometric periods known to date: ${1.080}^{+0.004}_{-0.005}$ h, ${1.14}^{+0.03}_{-0.01}$ h, and ${1.23}^{+0.01}_{-0.01}$ h, respectively. We confirm the rapid rotation through moderate-resolution infrared spectroscopy, which reveals projected rotational velocities between 79 and 104 km s$^{-1}$. We compare the near-infrared spectra to photospheric models to determine the objects' fundamental parameters and radial velocities. We find that the equatorial rotational velocities for all three objects are $\gtrsim$100 km s$^{-1}$. The three L and T dwarfs reported here are the most rapidly spinning and likely the most oblate field ultra-cool dwarfs known to date. Correspondingly, all three are excellent candidates for seeking auroral radio emission and net optical/infrared polarization. As of this writing, 78 L-, T-, and Y-dwarf rotation periods have now been measured. The clustering of the shortest rotation periods near 1 h suggests that brown dwarfs are unlikely to spin much faster., Comment: 35 pages, 13 figures, 6 tables, accepted for publication in the Astronomical Journal, typos corrected in updated version
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- 2021
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17. Retraction Note: Effect of pantoprazole to enhance activity of docetaxel against human tumour xenografts by inhibiting autophagy
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Tan, Q., Joshua, A. M., Saggar, J. K., Yu, M., Wang, M., Kanga, N., Zhang, J. Y., Chen, X., Wouters, B. G., and Tannock, I. F.
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- 2024
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18. The fecal microbiotas of women of Pacific and New Zealand European ethnicities are characterized by distinctive enterotypes that reflect dietary intakes and fecal water content
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Nikki Renall, Blair Lawley, Tommi Vatanen, Benedikt Merz, Jeroen Douwes, Marine Corbin, Lisa Te Morenga, Rozanne Kruger, Bernhard H Breier, and Gerald W Tannock
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Fecal microbiota ,enterotypes ,dietary intake ,fecal water content ,obesity ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
ABSTRACTObesity is a complex, multifactorial condition that is an important risk factor for noncommunicable diseases including cardiovascular disease and type 2 diabetes. While prevention and management require a healthy and energy balanced diet and adequate physical activity, the taxonomic composition and functional attributes of the colonic microbiota may have a supplementary role in the development of obesity. The taxonomic composition and metabolic capacity of the fecal microbiota of 286 women, resident in Auckland New Zealand, was determined by metagenomic analysis. Associations with BMI (obese, nonobese), body fat composition, and ethnicity (Pacific, n = 125; NZ European women [NZE], n = 161) were assessed using regression analyses. The fecal microbiotas were characterized by the presence of three distinctive enterotypes, with enterotype 1 represented in both Pacific and NZE women (39 and 61%, respectively), enterotype 2 mainly in Pacific women (84 and 16%) and enterotype 3 mainly in NZE women (13 and 87%). Enterotype 1 was characterized mainly by the relative abundances of butyrate producing species, Eubacterium rectale and Faecalibacterium prausnitzii, enterotype 2 by the relative abundances of lactic acid producing species, Bifidobacterium adolescentis, Bifidobacterium bifidum, and Lactobacillus ruminis, and enterotype 3 by the relative abundances of Subdoligranulum sp., Akkermansia muciniphila, Ruminococcus bromii, and Methanobrevibacter smithii. Enterotypes were also associated with BMI, visceral fat %, and blood cholesterol. Habitual food group intake was estimated using a 5 day nonconsecutive estimated food record and a 30 day, 220 item semi-quantitative Food Frequency Questionnaire. Higher intake of ‘egg’ and ‘dairy’ products was associated with enterotype 3, whereas ‘non-starchy vegetables’, ‘nuts and seeds’ and ‘plant-based fats’ were positively associated with enterotype 1. In contrast, these same food groups were inversely associated with enterotype 2. Fecal water content, as a proxy for stool consistency/colonic transit time, was associated with microbiota taxonomic composition and gene pools reflective of particular bacterial biochemical pathways. The fecal microbiotas of women of Pacific and New Zealand European ethnicities are characterized by distinctive enterotypes, most likely due to differential dietary intake and fecal consistency/colonic transit time. These parameters need to be considered in future analyses of human fecal microbiotas.
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- 2023
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19. Cell proliferation, drug distribution and therapeutic effects in relation to the vascular system of solid tumours
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Tannock, Ian F. and Gordon Steel, G.
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- 2023
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20. Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies
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Kennedy, Katherine M., de Goffau, Marcus C., Perez-Muñoz, Maria Elisa, Arrieta, Marie-Claire, Bäckhed, Fredrik, Bork, Peer, Braun, Thorsten, Bushman, Frederic D., Dore, Joel, de Vos, Willem M., Earl, Ashlee M., Eisen, Jonathan A., Elovitz, Michal A., Ganal-Vonarburg, Stephanie C., Gänzle, Michael G., Garrett, Wendy S., Hall, Lindsay J., Hornef, Mathias W., Huttenhower, Curtis, Konnikova, Liza, Lebeer, Sarah, Macpherson, Andrew J., Massey, Ruth C., McHardy, Alice Carolyn, Koren, Omry, Lawley, Trevor D., Ley, Ruth E., O’Mahony, Liam, O’Toole, Paul W., Pamer, Eric G., Parkhill, Julian, Raes, Jeroen, Rattei, Thomas, Salonen, Anne, Segal, Eran, Segata, Nicola, Shanahan, Fergus, Sloboda, Deborah M., Smith, Gordon C. S., Sokol, Harry, Spector, Tim D., Surette, Michael G., Tannock, Gerald W., Walker, Alan W., Yassour, Moran, and Walter, Jens
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- 2023
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21. Prolific Compositions
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Tannock, Murray and Albert, Michael
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Computer Science - Discrete Mathematics ,Mathematics - Combinatorics - Abstract
Under what circumstances might every extension of a combinatorial structure contain more copies of another one than the original did? This property, which we call prolificity, holds universally in some cases (e.g., finite linear orders) and only trivially in others (e.g., permutations). Integer compositions, or equivalently layered permutations, provide a middle ground. In that setting, there are prolific compositions for a given pattern if and only if that pattern begins and ends with 1. For each pattern, there is an easily constructed automaton that recognises prolific compositions for that pattern. Some instances where there is a unique minimal prolific composition for a pattern are classified.
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- 2019
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22. Cognitive impairment in adolescent and young adult cancer patients: Pre‐treatment findings of a longitudinal study
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Alexandre Chan, Ivy Cheng, Claire Wang, Chia Jie Tan, Yi Long Toh, Ding Quan Ng, Yong Qin Koh, Hanzhang Zhou, Koon Mian Foo, Raymond Javan Chan, Han Kiat Ho, Lita Chew, Mohamad Farid, and Ian Tannock
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adolescent and young adult ,brain‐derived neurotrophic factor ,cancer ,cancer‐related cognitive impairment ,cognition ,inflammatory cytokines ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background There is little information about cancer‐related cognitive impairment (CRCI) in adolescent and young adults (AYA, 15–39 years old) due to its rare incidence. Here, we present the pre‐treatment (before chemotherapy or radiotherapy) evaluation of cognitive function and ability of AYA with cancer (AYAC) in a multicentered cohort study. Methods Newly diagnosed AYAC and age‐matched healthy controls (HC) were recruited between 2018 and 2021. The primary outcome was the comparison of pre‐treatment cognitive impairment defined as 2 standard deviations (SDs) below the HC on ≥1 cognitive test, or >1.5 SDs below on ≥2 tests using CANTAB® between AYAC and HC. Secondary outcomes included self‐perceived cognitive ability assessed by FACT‐Cog v3 and biomarkers (inflammatory cytokines and brain‐derived neurotrophic factor [BDNF]). Results We recruited 74 AYAC (median age = 34) and 118 HC (median age = 32). On objective cognitive testing, we observed three times more AYAC patients performed poorly on at least 2 cognitive tests compared to HC (40.5% vs. 13.6%, p
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- 2023
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23. Decreased fetal movements—the utility of ultrasound to identify infants at risk and prevent stillbirth is poor
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Turner, Jessica M., Cincotta, Rob, Chua, Jacqueline, Gardener, Glenn, Petersen, Scott, Thomas, Joseph, Lee-Tannock, Alison, and Kumar, Sailesh
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- 2023
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24. Children & Youth Can Change the World!
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Tannock, Stuart, Reid, Alan, Series Editor, McKenzie, Marcia, Series Editor, and Tannock, Stuart
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- 2021
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25. Conclusion
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Tannock, Stuart, Reid, Alan, Series Editor, McKenzie, Marcia, Series Editor, and Tannock, Stuart
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- 2021
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26. The Role of Self Interest
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Tannock, Stuart, Reid, Alan, Series Editor, McKenzie, Marcia, Series Editor, and Tannock, Stuart
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- 2021
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27. Thinking Through Places
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Tannock, Stuart, Reid, Alan, Series Editor, McKenzie, Marcia, Series Editor, and Tannock, Stuart
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- 2021
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28. Learning Power & Taking Collective Action
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Tannock, Stuart, Reid, Alan, Series Editor, McKenzie, Marcia, Series Editor, and Tannock, Stuart
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- 2021
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29. Pedagogies of Hope and Fear
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Tannock, Stuart, Reid, Alan, Series Editor, McKenzie, Marcia, Series Editor, and Tannock, Stuart
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- 2021
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30. Curriculum Struggles: Knowledge, Truth … Action?
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Tannock, Stuart, Reid, Alan, Series Editor, McKenzie, Marcia, Series Editor, and Tannock, Stuart
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- 2021
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31. Nudging and Informal Learning
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Tannock, Stuart, Reid, Alan, Series Editor, McKenzie, Marcia, Series Editor, and Tannock, Stuart
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- 2021
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32. Introduction
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Tannock, Stuart, Reid, Alan, Series Editor, McKenzie, Marcia, Series Editor, and Tannock, Stuart
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- 2021
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33. Correction: Genomic insights from Monoglobus pectinilyticus: a pectin-degrading specialist bacterium in the human colon
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Kim, Caroline C., Lunken, Genelle R., Kelly, William J., Patchett, Mark L., Jordens, Zoe, Tannock, Gerald W., Sims, Ian M., Bell, Tracey J., Hedderley, Duncan, Henrissat, Bernard, and Rosendale, Douglas I.
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- 2023
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34. Lack of cognitive impairment in long-term survivors of colorectal cancer
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Vardy, Janette L., Pond, Gregory R., Cysique, Lucette A., Gates, Thomas M., Lagopoulos, Jim, Renton, Corrinne, Waite, Louise M., Tannock, Ian F., and Dhillon, Haryana M.
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- 2022
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35. Endocrine Self-Assessment Program Questions, Answers, Discussions (ESAP 2022)
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Lisa R Tannock, Lisa R Tannock
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- 2022
36. Serum amyloid A augments the atherogenic effects of cholesteryl ester transfer protein
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Ailing Ji, Andrea C. Trumbauer, Victoria P. Noffsinger, Frederick C. de Beer, Nancy R. Webb, Lisa R. Tannock, and Preetha Shridas
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serum amyloid A ,cholesteryl ester transfer protein ,atherosclerosis ,lipid metabolism ,apolipoprotein ,HDL ,Biochemistry ,QD415-436 - Abstract
Serum amyloid A (SAA) is predictive of CVD in humans and causes atherosclerosis in mice. SAA has many proatherogenic effects in vitro. However, HDL, the major carrier of SAA in the circulation, masks these effects. The remodeling of HDL by cholesteryl ester transfer protein (CETP) liberates SAA restoring its proinflammatory activity. Here, we investigated whether deficiency of SAA suppresses the previously described proatherogenic effect of CETP. ApoE−/− mice and apoE−/− mice deficient in the three acute-phase isoforms of SAA (SAA1.1, SAA2.1, and SAA3; “apoE−/− SAA-TKO”) with and without adeno-associated virus-mediated expression of CETP were studied. There was no effect of CETP expression or SAA genotype on plasma lipids or inflammatory markers. Atherosclerotic lesion area in the aortic arch of apoE−/− mice was 5.9 ± 1.2%; CETP expression significantly increased atherosclerosis in apoE−/− mice (13.1 ± 2.2%). However, atherosclerotic lesion area in the aortic arch of apoE−/− SAA-TKO mice (5.1 ± 1.1%) was not significantly increased by CETP expression (6.2 ± 0.9%). The increased atherosclerosis in apoE−/− mice expressing CETP was associated with markedly increased SAA immunostaining in aortic root sections. Thus, SAA augments the atherogenic effects of CETP, which suggests that inhibiting CETP may be of particular benefit in patients with high SAA.
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- 2023
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37. Chronic environmental circadian disruption increases atherosclerosis and dyslipidemia in female, but not male, ApolipoproteinE-deficient mice
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Jeffrey M. Chalfant, Deborah A. Howatt, Victoria B. Johnson, Lisa R. Tannock, Alan Daugherty, and Julie S. Pendergast
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circadian rhythm ,shift work ,cardiovascular disease ,eating rhythm ,fasting ,Physiology ,QP1-981 - Abstract
Shift work chronically disrupts circadian rhythms and increases the risk of developing cardiovascular disease. However, the mechanisms linking shift work and cardiovascular disease are largely unknown. The goal of this study was to investigate the effects of chronically shifting the light-dark (LD) cycle, which models the disordered exposure to light that may occur during shift work, on atherosclerosis. Atherosclerosis is the progressive accumulation of lipid-filled lesions within the artery wall and is the leading cause of cardiovascular disease. We studied ApolipoproteinE-deficient (ApoE−/−) mice that are a well-established model of atherosclerosis. Male and female ApoE−/− mice were housed in control 12L:12D or chronic LD shift conditions for 12 weeks and fed low-fat diet. In the chronic LD shift condition, the light-dark cycle was advanced by 6 h every week. We found that chronic LD shifts exacerbated atherosclerosis in female, but not male, ApoE−/− mice. In females, chronic LD shifts increased total serum cholesterol concentrations with increased atherogenic VLDL/LDL particles. Chronic LD shifts did not affect food intake, activity, or body weight in male or female ApoE−/− mice. We also examined eating behavior in female ApoE−/− mice since aberrant meal timing has been linked to atherosclerosis. The phases of eating behavior rhythms, like locomotor activity rhythms, gradually shifted to the new LD cycle each week in the chronic LD shift group, but there was no effect of the LD shift on the amplitudes of the eating rhythms. Moreover, the duration of fasting intervals was not different in control 12L:12D compared to chronic LD shift conditions. Together these data demonstrate that female ApoE−/− mice have increased atherosclerosis when exposed to chronic LD shifts due to increased VLDL/LDL cholesterol, independent of changes in energy balance or feeding-fasting cycles.
- Published
- 2023
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38. Priorities for cancer research in low- and middle-income countries: a global perspective
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Pramesh, C. S., Badwe, Rajendra A., Bhoo-Pathy, Nirmala, Booth, Christopher M., Chinnaswamy, Girish, Dare, Anna J., de Andrade, Victor Piana, Hunter, David J., Gopal, Satish, Gospodarowicz, Mary, Gunasekera, Sanjeeva, Ilbawi, Andre, Kapambwe, Sharon, Kingham, Peter, Kutluk, Tezer, Lamichhane, Nirmal, Mutebi, Miriam, Orem, Jackson, Parham, Groesbeck, Ranganathan, Priya, Sengar, Manju, Sullivan, Richard, Swaminathan, Soumya, Tannock, Ian F., Tomar, Vivek, Vanderpuye, Verna, Varghese, Cherian, and Weiderpass, Elisabete
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- 2022
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39. A Statistical Survey of Peculiar L and T Dwarfs in SDSS, 2MASS, and WISE
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Kellogg, Kendra, Metchev, Stanimir, Miles-Páez, Paulo A., and Tannock, Megan E.
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Astrophysics - Solar and Stellar Astrophysics - Abstract
We present the final results from a targeted search for brown dwarfs with unusual near-infrared colors. From a positional cross-match of SDSS, 2MASS and WISE, we have identified 144 candidate peculiar L and T dwarfs. Spectroscopy confirms that 20 of the objects are peculiar or are candidate binaries. Nine of the 420 objects in our sample are young ($\lesssim$200 Myr; 2.1%) and another 8 (1.9%) are unusually red with no signatures of youth. With a spectroscopic $J-K_s$ color of 2.58 $\pm$ 0.11 mag, one of the new objects, the L6 dwarf 2MASS J03530419+0418193, is among the reddest field dwarfs currently known and is one of the reddest objects with no signatures of youth known to date. We have also discovered another potentially very low gravity object, the L1 dwarf 2MASS J00133470+1109403, and independently identified the young L7 dwarf 2MASS J00440332+0228112, first reported by Schneider and collaborators. Our results confirm that signatures of low gravity are no longer discernible in low to moderate resolution spectra of objects older than $\sim$200 Myr. The 1.9% of unusually red L dwarfs that do not show other signatures of youth could be slightly older, up to $\sim$400 Myr. In this case a red $J-K_s$ color may be more diagnostic of moderate youth than individual spectral features. However, its is also possible that these objects are relatively metal-rich, and so have an enhanced atmospheric dust content., Comment: 27 pages, 7 figures, 5 tables, accepted to AJ
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- 2017
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40. Equivalence classes of mesh patterns with a dominating pattern
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Tannock, Murray and Ulfarsson, Henning
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Mathematics - Combinatorics ,05A05, 05A15 - Abstract
Two mesh patterns are coincident if they are avoided by the same set of permutations, and are Wilf-equivalent if they have the same number of avoiders of each length. We provide sufficient conditions for coincidence of mesh patterns, when only permutations also avoiding a longer classical pattern are considered. Using these conditions we completely classify coincidences between families containing a mesh pattern of length 2 and a classical pattern of length 3. Furthermore, we completely Wilf-classify mesh patterns of length 2 inside the class of 231-avoiding permutations.
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- 2017
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41. The human gut metacommunity as a conceptual aid in the development of precision medicine.
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Tannock, Gerald W.
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INDIVIDUALIZED medicine ,HUMAN microbiota ,SYMBIOSIS ,DYSBIOSIS ,GENETIC speciation - Abstract
Human gut microbiomes (microbiotas) are highly individualistic in taxonomic composition but nevertheless are functionally similar. Thus, collectively, they comprise a "metacommunity." In ecological terminology, the assembly of human gut microbiomes is influenced by four processes: selection, speciation, drift, and dispersal. As a result of fortuitous events associated with these processes, individual microbiomes are taxonomically "tailor-made" for each host. However, functionally they are "off-the-shelf" because of similar functional outputs resulting from metabolic redundancy developed in host-microbe symbiosis. Because of this, future microbiological and molecular studies of microbiomes should emphasize the metabolic interplay that drives the human gut metacommunity and that results in these similar functional outputs. This knowledge will support the development of remedies for specific functional dysbioses and hence provide practical examples of precision medicine. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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42. Dietary Fibre Intake, Adiposity, and Metabolic Disease Risk in Pacific and New Zealand European Women.
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Renall, Nikki, Merz, Benedikt, Douwes, Jeroen, Corbin, Marine, Slater, Joanne, Tannock, Gerald W., Firestone, Ridvan, Kruger, Rozanne, and Te Morenga, Lisa
- Abstract
Background/Objectives: To assess associations between dietary fibre intake, adiposity, and odds of metabolic syndrome in Pacific and New Zealand European women. Methods: Pacific (n = 126) and New Zealand European (NZ European; n = 161) women (18–45 years) were recruited based on normal (18–24.9 kg/m
2 ) and obese (≥30 kg/m2 ) BMIs. Body fat percentage (BF%), measured using whole body DXA, was subsequently used to stratify participants into low (<35%) or high (≥35%) BF% groups. Habitual dietary intake was calculated using the National Cancer Institute (NCI) method, involving a five-day food record and semi-quantitative food frequency questionnaire. Fasting blood was analysed for glucose and lipid profile. Metabolic syndrome was assessed with a harmonized definition. Results: NZ European women in both the low- and high-BF% groups were older, less socioeconomically deprived, and consumed more dietary fibre (low-BF%: median 23.7 g/day [25–75-percentile, 20.1, 29.9]; high-BF%: 20.9 [19.4, 24.9]) than Pacific women (18.8 [15.6, 22.1]; and 17.8 [15.0, 20.8]; both p < 0.001). The main source of fibre was discretionary fast foods for Pacific women and whole grain breads and cereals for NZ European women. A regression analysis controlling for age, socioeconomic deprivation, ethnicity, energy intake, protein, fat, and total carbohydrate intake showed an inverse association between higher fibre intake and BF% (β= −0.47, 95% CI = −0.62, −0.31, p < 0.001), and odds of metabolic syndrome (OR = 0.91, 95% CI = 0.84, 0.98, p = 0.010) among both Pacific and NZ European women (results shown for both groups combined). Conclusions: Low dietary fibre intake was associated with increased metabolic disease risk. Pacific women had lower fibre intakes than NZ European women. [ABSTRACT FROM AUTHOR]- Published
- 2024
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43. The Oil Industry in Our Schools: From Petro Pete to Science Capital in the Age of Climate Crisis
- Author
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Tannock, Stuart
- Abstract
Fossil fuel corporations play a significant role in promoting their interests in schools and other educational institutions, a practice that has recently been labelled as 'petro-pedagogy.' But this role goes beyond the production of the pro-petroleum and anti-science corporate propaganda that tends to attract the most critical attention. In this article, I present a case study of the involvement of BP, one of the world's largest fossil fuel corporations, in primary and secondary education in the United Kingdom. As practiced by BP, petro-pedagogy constitutes a core part of a corporate education reform network that, for the past decade, has focused on promoting a neoliberal model of STEM education in schools around the world. This model, based on corporate and capitalist interests, poses a significant threat to our collective efforts to tackle the global climate crisis.
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- 2020
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44. Management of Patients with Advanced Prostate Cancer: The Report of the Advanced Prostate Cancer Consensus Conference APCCC 2017
- Author
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Gillessen, Silke, Attard, Gerhardt, Beer, Tomasz M, Beltran, Himisha, Bossi, Alberto, Bristow, Rob, Carver, Brett, Castellano, Daniel, Chung, Byung Ha, Clarke, Noel, Daugaard, Gedske, Davis, Ian D, de Bono, Johann, dos Reis, Rodolfo Borges, Drake, Charles G, Eeles, Ros, Efstathiou, Eleni, Evans, Christopher P, Fanti, Stefano, Feng, Felix, Fizazi, Karim, Frydenberg, Mark, Gleave, Martin, Halabi, Susan, Heidenreich, Axel, Higano, Celestia S, James, Nicolas, Kantoff, Philip, Kellokumpu-Lehtinen, Pirkko-Liisa, Khauli, Raja B, Kramer, Gero, Logothetis, Chris, Maluf, Fernando, Morgans, Alicia K, Morris, Michael J, Mottet, Nicolas, Murthy, Vedang, Oh, William, Ost, Piet, Padhani, Anwar R, Parker, Chris, Pritchard, Colin C, Roach, Mack, Rubin, Mark A, Ryan, Charles, Saad, Fred, Sartor, Oliver, Scher, Howard, Sella, Avishay, Shore, Neal, Smith, Matthew, Soule, Howard, Sternberg, Cora N, Suzuki, Hiroyoshi, Sweeney, Christopher, Sydes, Matthew R, Tannock, Ian, Tombal, Bertrand, Valdagni, Riccardo, Wiegel, Thomas, and Omlin, Aurelius
- Subjects
Cancer ,Urologic Diseases ,Aging ,Prostate Cancer ,Good Health and Well Being ,Humans ,Male ,Neoplasm Staging ,Practice Guidelines as Topic ,Prostatic Neoplasms ,Advanced and high-risk localized prostate cancer ,Castration-naive and castration-resistant prostate cancer ,Therapeutics ,Consensus ,Oligometastatic prostate cancer ,Clinical Sciences ,Urology & Nephrology - Abstract
BackgroundIn advanced prostate cancer (APC), successful drug development as well as advances in imaging and molecular characterisation have resulted in multiple areas where there is lack of evidence or low level of evidence. The Advanced Prostate Cancer Consensus Conference (APCCC) 2017 addressed some of these topics.ObjectiveTo present the report of APCCC 2017.Design, setting, and participantsTen important areas of controversy in APC management were identified: high-risk localised and locally advanced prostate cancer; "oligometastatic" prostate cancer; castration-naïve and castration-resistant prostate cancer; the role of imaging in APC; osteoclast-targeted therapy; molecular characterisation of blood and tissue; genetic counselling/testing; side effects of systemic treatment(s); global access to prostate cancer drugs. A panel of 60 international prostate cancer experts developed the program and the consensus questions.Outcome measurements and statistical analysisThe panel voted publicly but anonymously on 150 predefined questions, which have been developed following a modified Delphi process.Results and limitationsVoting is based on panellist opinion, and thus is not based on a standard literature review or meta-analysis. The outcomes of the voting had varying degrees of support, as reflected in the wording of this article, as well as in the detailed voting results recorded in Supplementary data.ConclusionsThe presented expert voting results can be used for support in areas of management of men with APC where there is no high-level evidence, but individualised treatment decisions should as always be based on all of the data available, including disease extent and location, prior therapies regardless of type, host factors including comorbidities, as well as patient preferences, current and emerging evidence, and logistical and economic constraints. Inclusion of men with APC in clinical trials should be strongly encouraged. Importantly, APCCC 2017 again identified important areas in need of trials specifically designed to address them.Patient summaryThe second Advanced Prostate Cancer Consensus Conference APCCC 2017 did provide a forum for discussion and debates on current treatment options for men with advanced prostate cancer. The aim of the conference is to bring the expertise of world experts to care givers around the world who see less patients with prostate cancer. The conference concluded with a discussion and voting of the expert panel on predefined consensus questions, targeting areas of primary clinical relevance. The results of these expert opinion votes are embedded in the clinical context of current treatment of men with advanced prostate cancer and provide a practical guide to clinicians to assist in the discussions with men with prostate cancer as part of a shared and multidisciplinary decision-making process.
- Published
- 2018
45. Retraction notice to “Role of Autophagy as a Survival Mechanism for Hypoxic Cells in Tumors” [Neoplasia 18 (2016) 347- 355/201]
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Tan, Qian, primary, Wang, Marina, additional, Yu, Man, additional, Zhang, Junyan, additional, Bristow, Robert G., additional, Hill, Richard P., additional, and Tannock, Ian F., additional
- Published
- 2024
- Full Text
- View/download PDF
46. Dietary fibre intake, adiposity, and metabolic disease risk in Pacific and New Zealand European women
- Author
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Renall, N., primary, Merz, B., additional, Douwes, J., additional, Corbin, M., additional, Slater, J., additional, Tannock, G.W., additional, Firestone, R., additional, Kruger, R., additional, Breier, B.H., additional, and Te Morenga, L., additional
- Published
- 2024
- Full Text
- View/download PDF
47. A LOFAR mini-survey for low-frequency radio emission from the nearest brown dwarfs
- Author
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Burningham, Ben, Hardcastle, M., Nichols, J. D., Casewell, S. L., Littlefair, S. P., Stark, C., Burleigh, M. R., Metchev, S., Tannock, M. E., van Weeren, R. J., Williams, W. L., and Wynn, G. A.
- Subjects
Astrophysics - Solar and Stellar Astrophysics ,Astrophysics - Earth and Planetary Astrophysics - Abstract
We have conducted a mini-survey for low-frequency radio emission from some of the closest brown dwarfs to the Sun with rapid rotation rates: SIMP J013656.5+093347, WISEPC J150649.97+702736.0, and WISEPA J174124.26+255319.5. We have placed robust 3-sigma upper limits on the flux density in the 111 - 169 MHz frequency range for these targets: WISE 1506: < 0.72 mJy; WISE 1741: < 0.87 mJy; SIMP 0136: < 0.66 mJy. At 8 hours of integration per target to achieve these limits, we find that systematic and detailed study of this class of object at LOFAR frequencies will require a substantial dedication of resources., Comment: 9 pages. MNRAS accepted
- Published
- 2016
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48. Searching for the HR 8799 Debris Disk with HST/STIS
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Gerard, Benjamin L., Lawler, Samantha M., Marois, Christian, Tannock, Megan, Matthews, Brenda, and Venn, Kim
- Subjects
Astrophysics - Earth and Planetary Astrophysics ,Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
We present a new algorithm for space telescope high contrast imaging of close-to-face-on planetary disks called Optimized Spatially Filtered (OSFi) normalization. This algorithm is used on HR 8799 Hubble Space Telescope (HST) coronagraphic archival data, showing an over-luminosity after reference star point spread function (PSF) subtraction that may be from the inner disk and/or planetesimal belt components of this system. The PSF-subtracted radial profiles in two separate epochs from 2011 and 2012 are consistent with one another, and self-subtraction shows no residual in both epochs. We explore a number of possible false-positive scenarios that could explain this residual flux, including telescope breathing, spectral differences between HR 8799 and the reference star, imaging of the known warm inner disk component, OSFi algorithm throughput and consistency with the standard spider normalization HST PSF subtraction technique, and coronagraph misalignment from pointing accuracy. In comparison to another similar STIS dataset, we find that the over-luminosity is likely a result of telescope breathing and spectral difference between HR 8799 and the reference star. Thus, assuming a non-detection, we derive upper limits on the HR 8799 dust belt mass in small grains. In this scenario, we find that the flux of these micron-sized dust grains leaving the system due to radiation pressure is small enough to be consistent with measurements of other debris disk halos.
- Published
- 2016
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49. Pattern avoiding permutations and independent sets in graphs
- Author
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Bean, Christian, Tannock, Murray, and Ulfarsson, Henning
- Subjects
Mathematics - Combinatorics - Abstract
We introduce a new method for encoding permutations as weighted independent sets in a family of graphs we call cores. The encoding allows us to enumerate (1324, 2143)-, (1234, 1324, 2143)-, (1234, 1324, 1432, 3214)-avoiding permutations with respect to their number of "boundary points" and the size of the independent set in the graph they correspond to., Comment: 21 pages, 14 figures, 3 tables
- Published
- 2015
50. The International Collaboration for Research methods Development in Oncology (CReDO) workshops: shaping the future of global oncology research
- Author
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Ranganathan, Priya, Chinnaswamy, Girish, Sengar, Manju, Gadgil, Durga, Thiagarajan, Shivakumar, Bhargava, Balram, Booth, Christopher M, Buyse, Marc, Chopra, Sanjiv, Frampton, Chris, Gopal, Satish, Grant, Nick, Krailo, Mark, Langley, Ruth, Mathur, Prashant, Paoletti, Xavier, Parmar, Mahesh, Purushotham, Arnie, Pyle, Douglas, Rajaraman, Preetha, Stockler, Martin R, Sullivan, Richard, Swaminathan, Soumya, Tannock, Ian, Trimble, Edward, Badwe, Rajendra A, and Pramesh, C S
- Published
- 2021
- Full Text
- View/download PDF
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