30 results on '"Tuan D. Tran"'
Search Results
2. Transforming stress program on medical students’ stress mindset and coping strategies: a quasi-experimental study
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Tan Nguyen, Christy Pu, Alexander Waits, Tuan D. Tran, Tuan Hung Ngo, Quynh Thi Vu Huynh, and Song-Lih Huang
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Stress mindset ,Coping strategies ,Medical students ,Stress intervention ,Experimental study ,Special aspects of education ,LC8-6691 ,Medicine - Abstract
Abstract Objective Stress is a significant concern in medical education, and identifying effective ways to deal with stress may help with students’ mental health and professional development. This study aimed to examine the effects of the Transforming Stress Program (TSP) amongst first-year medical students on their stress mindset and coping strategies when confronted with stressors. Methods We conducted a quasi-experimental study at the University of Medicine and Pharmacy, Ho Chi Minh City, Vietnam. A total of 409 first-year students at the Faculty of Medicine were divided into intervention group (205 students) and control group (204 students). The 10-week TSP was delivered as an extra-curricular course. The training adopts psychoeducation based on Dialectical Behavioral Therapy with mindfulness as a fundamental practice incorporated into each component of the program. The intervention group received the training in the first semester; the control group received identical program in the second semester. Stress Mindset Measurement and Brief Coping Orientation to Problems Experienced were measured before the intervention (T0), immediately after intervention on Intervention group (T1), and six months after intervention on Intervention group (T2). Results At T1, the intervention group showed 65% improvements in stress mindset scores and increases in coping strategies scores in six domains (Problem solving, Social support, Humor, Religion, Venting, and Self-distraction) and decreases in three (Avoidance, Substance use, and Self-blame). The effect sizes were significant in all outcomes (Cohen’s d > 0.2). Measurements of the control group did not change significantly in the same period. At T2, effects of the TSP were found decreased in some domains (Avoidance, Substance use, and Self-blame) compared to T1, but largely remained significantly better than T0. Conclusions The TSP is a feasible and effective approach that significantly enhanced medical students’ stress mindset and coping strategies. Some effects were still observable 6 months after the intervention. The relatively intensive intervention requires support of the school administration and staff.
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- 2023
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3. Sources of stress, coping strategies and associated factors among Vietnamese first-year medical students
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Tan Nguyen, Christy Pu, Alexander Waits, Tuan D. Tran, Yatan Pal Singh Balhara, Quynh Thi Vu Huynh, and Song-Lih Huang
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Medicine ,Science - Published
- 2024
4. Bacterial filamentation as a mechanism for cell-to-cell spread within an animal host
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Tuan D. Tran, Munira Aman Ali, Davin Lee, Marie-Anne Félix, and Robert J. Luallen
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Science - Abstract
Some intracellular pathogens can directly invade neighboring host cells in cell culture, but it is unclear how this happens in vivo. Here, Tran et al. describe an intracellular bacterium that forms filaments to spread between intestinal epithelial cells in its host nematode, in a process regulated by a conserved nutrient-sensing pathway.
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- 2022
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5. Transforming medical education to strengthen the health professional training in Viet Nam: A case study
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Tuan D. Tran, Phuc M. Vu, Hong T.M. Pham, Luan N. Au, Hung P. Do, Hoa T.T. Doan, Nghia Huynh, Quynh T.V. Huynh, Bao K. Le, Dat Q. Ngo, Hanh T.M. Nguyen, Khanh D. Nguyen, Nghia A. Nguyen, Phong H. Nguyen, Tuan A. Nguyen, Thang C. Tran, Hoa N. Chau, Lan N. Vuong, and Nu V. Vu
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Medical education reform ,Curriculum development ,Curriculum implementation ,Curriculum governance ,Institutional governance ,Organisational structure ,Public aspects of medicine ,RA1-1270 - Abstract
Summary: The competency-based undergraduate curriculum reform at the University of Medicine and Pharmacy at Ho Chi Minh City, Faculty of Medicine (UMP-FM) is detailed and reviewed in reference to the instructional and institutional reforms, and enabling actions recommended by the Lancet 2010 Commission for Health Professional Education. Key objectives are to: revise the overall 6-year curriculum to be more integrated and competency-based; reinforce students’ knowledge application, problem-solving, clinical competence, self-directed learning and soft skills; develop a comprehensive and performance-based student assessment programme; and establish a comprehensive quality monitoring programme to facilitate changes and improvements. New features include early introduction to the practice of medicine, family- and community-based medicine, professionalism, interprofessional education, electives experiences, and a scholarly project. Institutional reform introduces a faculty development programme, joint planning mechanism, a “culture of critical inquiry”, and a transparent faculty reward system. Lessons learnt from the curriculum reform at UMP-FM could be helpful to medical schools from low- and middle-income countries considering transitioning from a traditional to a competency-based curriculum. Funding: This work receives no external funding.
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- 2022
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6. A Community-Based Model of Care During the Fourth Wave of the COVID-19 Outbreak in Ho Chi Minh City, Vietnam
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Lan N. Vuong, Nghia Huynh, Dat Q. Ngo, Vinh N. Nguyen, Khoa D. Duong, Nguyen N. Tran, Truyen P. Le, Nghia A. Nguyen, Thao T. P. Doan, Duy L. Pham, Tu H. K. Trinh, Quan T. T. Vu, Phong H. Nguyen, and Tuan D. Tran
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COVID-19 ,SARS-CoV-2 ,pandemic ,community ,Vietnam ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
In response to a call for help during a surge in coronavirus disease-19 (COVID-19) cases in Ho Chi Minh City in July 2021, the University of Medicine and Pharmacy at Ho Chi Minh City developed and implemented a community care model for the management of patients with COVID-19. This was based on three main principles: home care; providing monitoring and care at a distance; and providing timely emergency care if needed. One team supported patients at home with frequent contacts and remote monitoring, while a second team transferred and cared for patients requiring treatment at field emergency care facilities. COVID-19-related mortality rates at the two districts where this approach was implemented (0.43% and 0.57%) were substantially lower than the overall rate in Ho Chi Minh City over the same period (4.95%). Thus, utilization of a community care model can increase the number of patients with COVID-19 who can be effectively managed from home, and use of field emergency care facilities limited the number of patients that had to be referred for tertiary care. Importantly, the community care model also markedly reduced the mortality rate compared with traditional methods of COVID-19 patient management.
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- 2022
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7. Expression-Based Cell Lineage Analysis in Drosophila Through a Course-Based Research Experience for Early Undergraduates
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John M. Olson, Cory J. Evans, Kathy T. Ngo, Hee Jong Kim, Joseph Duy Nguyen, Kayla G. H. Gurley, Truc Ta, Vijay Patel, Lisa Han, Khoa T. Truong-N, Letty Liang, Maggie K. Chu, Hiu Lam, Hannah G. Ahn, Abhik Kumar Banerjee, In Young Choi, Ross G. Kelley, Naseem Moridzadeh, Awais M. Khan, Omair Khan, Szuyao Lee, Elizabeth B. Johnson, Annie Tigranyan, Jay Wang, Anand D. Gandhi, Manish M. Padhiar, Joseph Hargan Calvopina, Kirandeep Sumra, Kristy Ou, Jessie C. Wu, Joseph N. Dickan, Sabrena M. Ahmadi, Donald N. Allen, Van Thanh Mai, Saif Ansari, George Yeh, Earl Yoon, Kimberly Gon, John Y. Yu, Johnny He, Jesse M. Zaretsky, Noemi E. Lee, Edward Kuoy, Alexander N. Patananan, Daniel Sitz, PhuongThao Tran, Minh-Tu Do, Samira J. Akhave, Silverio D. Alvarez, Bobby Asem, Neda Asem, Nicole A. Azarian, Arezou Babaesfahani, Ahmad Bahrami, Manjeet Bhamra, Ragini Bhargava, Rakesh Bhatia, Subir Bhatia, Nicholas Bumacod, Jonathan J. Caine, Thomas A. Caldwell, Nicole A. Calica, Elise M. Calonico, Carman Chan, Helen H.-L. Chan, Albert Chang, Chiaen Chang, Daniel Chang, Jennifer S. Chang, Nauman Charania, Jasmine Y. Chen, Kevin Chen, Lu Chen, Yuyu Chen, Derek J. Cheung, Jesse J. Cheung, Jessica J. Chew, Nicole B. Chew, Cheng-An Tony Chien, Alana M. Chin, Chee Jia Chin, Youngho Cho, Man Ting Chou, Ke-Huan K. Chow, Carolyn Chu, Derrick M. Chu, Virginia Chu, Katherine Chuang, Arunit Singh Chugh, Mark R. Cubberly, Michael Guillermo Daniel, Sangita Datta, Raj Dhaliwal, Jenny Dinh, Dhaval Dixit, Emmylou Dowling, Melinda Feng, Christopher M. From, Daisuke Furukawa, Himaja Gaddipati, Lilit Gevorgyan, Zunera Ghaznavi, Tulika Ghosh, Jaskaran Gill, David J. Groves, Kalkidan K. Gurara, Ali R. Haghighi, Alexandra L. Havard, Nasser Heyrani, Tanya Hioe, Kirim Hong, Justin J. Houman, Molly Howland, Elaine L. Hsia, Justin Hsueh, Stacy Hu, Andrew J. Huang, Jasmine C. Huynh, Jenny Huynh, Chris Iwuchukwu, Michael J. Jang, An An Jiang, Simran Kahlon, Pei-Yun Kao, Manpreet Kaur, Matthew G. Keehn, Elizabeth J. Kim, Hannah Kim, Michelle J. Kim, Shawn J. Kim, Aleksandar Kitich, Ross A. Kornberg, Nicholas G. Kouzelos, Jane Kuon, Bryan Lau, Roger K. Lau, Rona Law, Huy D. Le, Rachael Le, Carrou Lee, Christina Lee, Grace E. Lee, Kenny Lee, Michelle J. Lee, Regina V. Lee, Sean H. K. Lee, Sung Kyu Lee, Sung-Ling D. Lee, Yong Jun Lee, Megan J. Leong, David M. Li, Hao Li, Xingfu Liang, Eric Lin, Michelle M. Lin, Peter Lin, Tiffany Lin, Stacey Lu, Serena S. Luong, Jessica S. Ma, Li Ma, Justin N. Maghen, Sravya Mallam, Shivtaj Mann, Jason H. Melehani, Ryan C. Miller, Nitish Mittal, Carmel M. Moazez, Susie Moon, Rameen Moridzadeh, Kaley Ngo, Hanh H. Nguyen, Kambria Nguyen, Thien H. Nguyen, Angela W. Nieh, Isabella Niu, Seo-Kyung Oh, Jessica R. Ong, Randi K. Oyama, Joseph Park, Yaelim A. Park, Kimberly A. Passmore, Ami Patel, Amy A. Patel, Dhruv Patel, Tirth Patel, Katherine E. Peterson, An Huynh Pham, Steven V. Pham, Melissa E. Phuphanich, Neil D. Poria, Alexandra Pourzia, Victoria Ragland, Riki D. Ranat, Cameron M. Rice, David Roh, Solomon Rojhani, Lili Sadri, Agafe Saguros, Zainab Saifee, Manjot Sandhu, Brooke Scruggs, Lisa M. Scully, Vanessa Shih, Brian A. Shin, Tamir Sholklapper, Harnek Singh, Sumedha Singh, Sondra L. Snyder, Katelyn F. Sobotka, Sae Ho Song, Siddharth Sukumar, Halley C. Sullivan, Mark Sy, Hande Tan, Sara K. Taylor, Shivani K. Thaker, Tulsi Thakore, Gregory E. Tong, Jacinda N. Tran, Jonathan Tran, Tuan D. Tran, Vivi Tran, Cindy L. Trang, Hung G. Trinh, Peter Trinh, Han-Ching H. Tseng, Ted T. Uotani, Akram V. Uraizee, Kent K. T. Vu, Kevin K. T. Vu, Komal Wadhwani, Paluk K. Walia, Rebecca S. Wang, Shuo Wang, Stephanie J. Wang, Danica D. Wiredja, Andrew L. Wong, Daniel Wu, Xi Xue, Griselda Yanez, Yung-Hsuan Yang, Zhong Ye, Victor W. Yee, Cynthia Yeh, Yue Zhao, Xin Zheng, Anke Ziegenbalg, Jon Alkali, Ida Azizkhanian, Akash Bhakta, Luke Berry, Ryen Castillo, Sonja Darwish, Holly Dickinson, Ritika Dutta, Rahul Kumar Ghosh, Riley Guerin, Jonathan Hofman, Garrick Iwamoto, Sarah Kang, Andrew Kim, Brian Kim, Hanwool Kim, Kristine Kim, Suji Kim, Julie Ko, Michael Koenig, Alejandro LaRiviere, Clifton Lee, Jiwon Lee, Brandon Lung, Max Mittelman, Mark Murata, Yujin Park, Daniel Rothberg, Ben Sprung-Keyser, Kunal Thaker, Vivian Yip, Paul Picard, Francie Diep, Nikki Villarasa, Volker Hartenstein, Casey Shapiro, Marc Levis-Fitzgerald, Leslie Jaworski, David Loppato, Ira E. Clark, and Utpal Banerjee
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g-trace ,gene expression ,education ,stem ,cure ,Genetics ,QH426-470 - Abstract
A variety of genetic techniques have been devised to determine cell lineage relationships during tissue development. Some of these systems monitor cell lineages spatially and/or temporally without regard to gene expression by the cells, whereas others correlate gene expression with the lineage under study. The GAL4 Technique for Real-time and Clonal Expression (G-TRACE) system allows for rapid, fluorescent protein-based visualization of both current and past GAL4 expression patterns and is therefore amenable to genome-wide expression-based lineage screens. Here we describe the results from such a screen, performed by undergraduate students of the University of California, Los Angeles (UCLA) Undergraduate Research Consortium for Functional Genomics (URCFG) and high school summer scholars as part of a discovery-based education program. The results of the screen, which reveal novel expression-based lineage patterns within the brain, the imaginal disc epithelia, and the hematopoietic lymph gland, have been compiled into the G-TRACE Expression Database (GED), an online resource for use by the Drosophila research community. The impact of this discovery-based research experience on student learning gains was assessed independently and shown to be greater than that of similar programs conducted elsewhere. Furthermore, students participating in the URCFG showed considerably higher STEM retention rates than UCLA STEM students that did not participate in the URCFG, as well as STEM students nationwide.
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- 2019
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8. Composite Aerogel for Heat Insulation
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Oanh T. H. Cao, Pha P. Thibthong, Quoc Ba Thai, Tuan D. Tran, Ha K. P. Huynh, and Son T. Nguyen
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Chemical engineering ,TP155-156 ,Computer engineering. Computer hardware ,TK7885-7895 - Abstract
Silica aerogels are often brittle and MTMS is rather expensive. Therefore, it is necessary to strengthen MTMS silica aerogels and lower their cost. In this research, hydrophobic composite monolithic methyltrimethoxysilane (MTMS) based aerogels were investigated. The aerogels were synthesized by an acid base sol-gel process with solvent exchange and freeze drying. Silica extracted from rice husk ash, poly vinyl alcohol (PVA) and glass wool were combined with MTMS to form the composite aerogels, whose microstructure, thermal property and hydrophobicity were evaluated. The aerogels were found to have thermal conductivity as low as 0.032 W/m.K and water contact angle as high as 152.2°.
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- 2020
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9. Effects of Phenyltrimethoxysilane and Polyvinyl Alcohol on the Properties of Methyltrimethoxysilane-based Silica Aerogels
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Son T. Nguyen, Ha K. P. Huynh, Nga T.D. Le, Phuc T.T. Nguyen, My N.T. Truong, Duyen K. Le, Quoc Ba Thai, Tuan D. Tran, Duong K. Ho, Oanh T. H. Cao, and Minh T. X. Nguyen
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Chemical engineering ,TP155-156 ,Computer engineering. Computer hardware ,TK7885-7895 - Abstract
Silica aerogels have attracted great attention owing to their outstanding properties such as ultralow density, high porosity, high surface area, and low thermal conductivities. Their poor mechanical properties and hydrophilicity constrain their practical applications. In this work, phenyltrimethoxysilane (PTMS) and polyvinyl alcohol (PVA) were added into methyltrimethoxysilane (MTMS)-based silica aerogels to enhance their mechanical properties. It was found that PTMS considerably improved the hydrophobicity of MTMS silica aerogels with an increase in water contact angles from 115° to 150°. The addition of PVA considerably increased the hardness, morphology, density, porosity, surface area, and thermal conductivity of MTMS silica aerogels. When PVA concentration was increased from 0 to 2 %, the aerogel hardness, density, and thermal conductivity were also increased from 0 to 14 %, 0.072 to 0.11 g/cm3, and 0.035 to 0.046 W/m.K. In contrast, the aerogel became less porous and the porosity reduced from 97.2 % to 95.72 % and BET surface area decreased from 389 to 43 m2/g.
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- 2020
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10. The effect of exercise on early sensorimotor performance alterations in the 3xTg-AD model of Alzheimer’s disease
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Sonja K. Bareiss, Tyler Johnston, Qun Lu, and Tuan D. Tran
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Mice, Inbred C57BL ,Disease Models, Animal ,Mice ,Alzheimer Disease ,General Neuroscience ,Animals ,Mice, Transgenic ,tau Proteins ,General Medicine ,Motor Activity ,Maze Learning - Abstract
Alzheimer's disease (AD) is characterized by a progressive decline in cognitive function; however, recent evidence suggests that non-cognitive sensorimotor and psychomotor symptoms accompany early stages of the disease in humans and AD models. Although exercise is emerging as an important therapeutic to combat AD progression, little is known about the effect of exercise on sensorimotor domain functions. The purpose of this study was to determine if early sensorimotor symptoms accompany deficits in Morris water maze (MWM) performance in the 3xTg-AD model, and investigate if exercise could protect against early behavioral decline. 3xTg-AD and wild-type (WT) control mice were subjected to 12 weeks of moderate intensity wheel running or remained sedentary. At 6 months of age, animals underwent a series of sensorimotor and MWM testing. 3xTg-AD mice displayed deficits in sensorimotor function (beam traversal, spontaneous activity, and adhesive removal) and MWM performance. Interestingly, 3xTg-AD animals exhibited increased freezing and unusual shaking/tremoring behaviors not displayed by WT controls. Exercise improved beam traversal, adhesive removal, and reduced the unusual motor-related behaviors in 3xTg-AD mice. Our study shows that sensorimotor symptoms coincide with deficits in MWM performance, and suggest that exercise may mitigate deficits associated with early disease in 3xTg-AD mice.
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- 2022
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11. An organismal understanding of C. elegans innate immune responses, from pathogen recognition to multigenerational resistance
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Tuan D. Tran and Robert J. Luallen
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Cell Biology ,Developmental Biology - Published
- 2023
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12. Genomic and phenotypic evolution of nematode-infecting microsporidia
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Lina Wadi, Hala Tamim El Jarkass, Tuan D. Tran, Nizar Islah, Robert J. Luallen, and Aaron W. Reinke
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Microsporidia are a large phylum of intracellular parasites that can infect most types of animals. Species in theNematocidagenus can infect nematodes includingCaenorhabditis elegans, which has become an important model to study mechanisms of microsporidia infection. To understand the genomic properties and evolution of nematode-infecting microsporidia, we sequenced the genomes of nine species of microsporidia, including two genera,EnteropsectraandPancytospora,without any previously sequenced genomes. Core cellular processes, including metabolic pathways, are mostly conserved across genera of nematode-infecting microsporidia. Each species encodes unique proteins belonging to large gene families that are likely used to interact with host cells. Most strikingly, we observed one such family, NemLGF1, is present in bothNematocidaandPancytosporaspecies, suggesting horizontal gene transfer between species from different genera. To understand howNematocidaphenotypic traits evolved, we measured the host range, tissue specificity, spore size, and polar tube length of several species in the genus. Our phylogenetic analysis shows thatNematocidais composed of two groups of species with distinct traits and that species with longer polar tubes infect multiple tissues. Together, our work details both genomic and trait evolution between related microsporidia species and provides a useful resource for further understanding microsporidia evolution and infection mechanisms.Author SummaryMicrosporidia are microbial parasites that can infect many animals. Nematodes have become a useful system to study microsporidia as these animals are commonly infected by microsporidia and these infections can be easily studied in a laboratory environment. To better understand how microsporidia evolve and change their properties as they infect different hosts, we sequenced the genomes of nine microsporidia species which infect nematodes. We found that metabolic pathways were mostly conserved between different clades of these species. Surprisingly, we found a family of proteins predicted to facilitate host interactions that is present in two distinct genera, suggesting that these genes were transferred between microsporidia species. We also determined the hosts and tissues that these microsporidia can infect as well as morphological properties of the microsporidia. We show that these properties are quite variable in related microsporidia species. Our results provide insight into the evolution of microsporidia and also provide a resource for studying microsporidia infections in nematodes.
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- 2022
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13. Behavioral and Transcriptome Profiling of Heterozygous Rab10 Knock-Out Mice
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Wyatt Bunner, Jie Wang, Sarah Cohen, Denys Bashtovyy, Rachel Perry, Daniel Shookster, Taylor Landry, Elizabeth M. Harris, Robert Stackman, Tuan D. Tran, Ryohei Yasuda, and Erzsebet M. Szatmari
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General Neuroscience ,General Medicine - Abstract
A central question in the field of aging research is to identify the cellular and molecular basis of neuroresilience. One potential candidate is the small GTPase, Rab10. Here, we used Rab10+/−mice to investigate the molecular mechanisms underlying Rab10-mediated neuroresilience. Brain expression analysis of 880 genes involved in neurodegeneration showed that Rab10+/−mice have increased activation of pathways associated with neuronal metabolism, structural integrity, neurotransmission, and neuroplasticity compared with their Rab10+/+littermates. Lower activation was observed for pathways involved in neuroinflammation and aging. We identified and validated several differentially expressed genes (DEGs), including Stx2, Stx1b, Vegfa, and Lrrc25 (downregulated) and Prkaa2, Syt4, and Grin2d (upregulated). Behavioral testing showed that Rab10+/−mice perform better in a hippocampal-dependent spatial task (object in place test), while their performance in a classical conditioning task (trace eyeblink classical conditioning, TECC) was significantly impaired. Therefore, our findings indicate that Rab10 differentially controls the brain circuitry of hippocampal-dependent spatial memory and higher-order behavior that requires intact cortex-hippocampal circuitry. Transcriptome and biochemical characterization of these mice suggest that glutamate ionotropic receptor NMDA type subunit 2D (GRIN2D or GluN2D) is affected by Rab10 signaling. Further work is needed to evaluate whether GRIN2D mediates the behavioral phenotypes of the Rab10+/−mice. We conclude that Rab10+/−mice described here can be a valuable tool to study the mechanisms of resilience in Alzheimer’s disease (AD) model mice and to identify novel therapeutical targets to prevent cognitive decline associated with normal and pathologic aging.
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- 2023
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14. Expression-Based Cell Lineage Analysis inDrosophilaThrough a Course-Based Research Experience for Early Undergraduates
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Daniel Chang, Earl Yoon, David Loppato, Justin N. Maghen, Silverio D. Alvarez, Kristy Ou, Katherine E. Peterson, Manjeet Bhamra, Helen H.-L. Chan, Lilit Gevorgyan, Clifton Lee, Peter Trinh, David M. Li, Elizabeth Kim, Garrick Iwamoto, Yue Zhao, Victor W. Yee, Kimberly Gon, Lisa M. Scully, Akram V. Uraizee, Sangita Datta, Sae Ho Song, Lisa Han, Andrew C. J. Huang, PhuongThao Tran, George K. Yeh, John M. Olson, Shawn J. Kim, Lili Sadri, Hannah G. Ahn, Grace E. Lee, Cindy L. Trang, Arezou Babaesfahani, Stephanie Wang, Saif Ansari, Hanwool Kim, Rakesh Bhatia, Brandon Lung, Victoria Ragland, Noemi E. Lee, Casey Shapiro, Van Thanh Mai, Sean H. K. Lee, Holly Dickinson, Joseph Park, Rona Law, Carrou Lee, Cameron M. Rice, Kirandeep Sumra, Alexandra L. Pourzia, Raj Dhaliwal, Vijay A. Patel, Michael Guillermo Daniel, Elaine L. Hsia, Hiu Wai Lam, Yujin Park, Jason H. Melehani, Annie Tigranyan, Xin Zheng, Nasser Heyrani, Jennifer Chang, Neda Asem, Joseph Duy Nguyen, Hanh H. Nguyen, Ted T. Uotani, Harnek Singh, Riley Guerin, Han-Ching H. Tseng, Kevin K. T. Vu, Max Mittelman, Gregory E. Tong, Cynthia Yeh, Jonathan Tran, Steven V. Pham, Bryan Lau, Kenny Lee, Tulika Ghosh, Roger K. Lau, An Huynh Pham, Christopher M. From, Elizabeth B. Johnson, Bobby Asem, Abhik Banerjee, Utpal Banerjee, Derek J. Cheung, Kambria Nguyen, Zainab Saifee, Carmel M. Moazez, Hung G. Trinh, Hannah Kim, Sonja Darwish, Lu Chen, Sondra L. Snyder, Pei-Yun Kao, Kevin Chen, Youngho Cho, Joseph Hargan Calvopina, Neil D. Poria, Vanessa Shih, Danica D. Wiredja, Shuo Wang, Zunera Ghaznavi, Jenny Dinh, Andrew J. Kim, Simran Kahlon, Awais M. Khan, Yuyu Chen, Julie Ko, Elise M. Calonico, Joseph N. Dickan, Huy D. Le, Leslie Jaworski, Xingfu Liang, Brooke Scruggs, Marc Levis-Fitzgerald, Susie Moon, Sara K. Taylor, An An Jiang, Nicholas Bumacod, Siddharth Sukumar, Matthew G. Keehn, Aleksandar Kitich, Cheng-An Tony Chien, Alexander N. Patananan, Jesse J. Cheung, Ragini Bhargava, Michael J. Jang, Alana M. Chin, Nikki Villarasa, Carman Chan, Ami Patel, Stacy Hu, Chiaen Chang, Solomon Rojhani, Michelle J. Kim, Shivani K. Thaker, Daisuke Furukawa, Arunit Singh Chugh, Volker Hartenstein, Hao Li, Akash Bhakta, Khoa T. Truong-N, Mark Sy, Daniel Rothberg, Melinda Feng, Kristine Kim, Nicole A. Azarian, David J. Groves, Sravya Mallam, Man Ting Chou, Katelyn F. Sobotka, Kathy T. Ngo, Justin Hsueh, Jasmine Y. Chen, Jessica Chew, Ira E. Clark, Zhong Ye, Mark R. Cubberly, Komal Wadhwani, Sumedha Singh, Jonathan J. Caine, Tamir Sholklapper, Jane Kuon, Nicholas G. Kouzelos, Emmylou Dowling, Francie Diep, Carolyn Chu, Kalkidan K. Gurara, Isabella Niu, Yaelim A. Park, Yong Jun Lee, Ali R. Haghighi, Nauman Charania, Nitish Mittal, Chee Jia Chin, Ben Sprung-Keyser, Naseem Moridzadeh, Donald N. Allen, Virginia Chu, Cory J. Evans, Luke Berry, Ahmad Bahrami, Justin J. Houman, Jesse M. Zaretsky, Kimberly A. Passmore, Chris Iwuchukwu, Rebecca S. Wang, Christina Lee, David Roh, Hee Jong Kim, Szuyao Lee, Rameen S. Moridzadeh, Randi K. Oyama, Amy A. Patel, Regina Lee, Serena S. Luong, Manpreet Kaur, Dhruv Patel, Xi Xue, Johnny He, Seo-Kyung Oh, Sabrena M. Ahmadi, Angela W. Nieh, Anke Ziegenbalg, Thien Nguyen, Jacinda N. Tran, John Y. Yu, Brian S. Kim, Eric Lin, Omair Khan, Ross G. Kelley, Sung Kyu Lee, Jessica S. Ma, Tanya Hioe, Nicole B. Chew, Kayla G. H. Gurley, Mark R Murata, Jiwon Lee, Hande Tan, Andrew L. Wong, Michael Koenig, Sung-Ling D. Lee, In Young Choi, Daniel Sitz, Paluk K. Walia, Maggie K. Chu, Ke-Huan K. Chow, Jessica R. Ong, Michelle J. Lee, Jenny Huynh, Rachael Le, Riki D. Ranat, Griselda Yanez, Yung-Hsuan Yang, Molly Howland, Ross A. Kornberg, Agafe Saguros, Peter Lin, Jessie C. Wu, Rahul Kumar Ghosh, Anand D. Gandhi, Jaskaran Gill, Edward Kuoy, Tulsi Thakore, Ritika Dutta, Himaja Gaddipati, Truc Ta, Melissa E. Phuphanich, Stacey Lu, Suji Kim, Letty Liang, Megan J. Leong, Derrick M. Chu, Michelle M. Lin, Alejandro LaRiviere, Alexandra L. Havard, Subir Bhatia, Minh-Tu Do, Sarah Kang, Jon Alkali, Kent K. T. Vu, Brian A. Shin, Samira J. Akhave, Kirim Hong, Thomas A. Caldwell, Jonathan Hofman, Vivi Tran, Katherine Chuang, Paul D. Picard, Jay Wang, Nicole A. Calica, Tiffany Y. Lin, Ryan C. Miller, Ida Azizkhanian, Manjot Sandhu, Dhaval Dixit, Kaley Ngo, Daniel Wu, Halley C. Sullivan, Jasmine C. Huynh, Tirth Patel, Vivian Yip, Manish M. Padhiar, Li Ma, Ryen Castillo, Shivtaj Mann, Tuan D. Tran, Albert J. Chang, and Kunal Thaker
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Lineage (genetic) ,QH426-470 ,Biology ,03 medical and health sciences ,Gene expression ,Genetics ,stem ,Molecular Biology ,Drosophila ,Genetics (clinical) ,030304 developmental biology ,education ,0303 health sciences ,g-trace ,4. Education ,05 social sciences ,050301 education ,biology.organism_classification ,cure ,Imaginal disc ,Haematopoiesis ,Undergraduate research ,Expression (architecture) ,Evolutionary biology ,gene expression ,0503 education ,Functional genomics - Abstract
A variety of genetic techniques have been devised to determine cell lineage relationships during tissue development. Some of these systems monitor cell lineages spatially and/or temporally without regard to gene expression by the cells, whereas others correlate gene expression with the lineage under study. The GAL4 Technique for Real-time and Clonal Expression (G-TRACE) system allows for rapid, fluorescent protein-based visualization of both current and past GAL4 expression patterns and is therefore amenable to genome-wide expression-based lineage screens. Here we describe the results from such a screen, performed by undergraduate students of the University of California, Los Angeles (UCLA) Undergraduate Research Consortium for Functional Genomics (URCFG) and high school summer scholars as part of a discovery-based education program. The results of the screen, which reveal novel expression-based lineage patterns within the brain, the imaginal disc epithelia, and the hematopoietic lymph gland, have been compiled into the G-TRACE Expression Database (GED), an online resource for use by the Drosophila research community. The impact of this discovery-based research experience on student learning gains was assessed independently and shown to be greater than that of similar programs conducted elsewhere. Furthermore, students participating in the URCFG showed considerably higher STEM retention rates than UCLA STEM students that did not participate in the URCFG, as well as STEM students nationwide.
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- 2019
- Full Text
- View/download PDF
15. Bacterial filamentation as a mechanism for cell-to-cell spread within an animal host
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Tuan D. Tran, Munira Aman Ali, Davin Lee, Marie-Anne Félix, and Robert J. Luallen
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Multidisciplinary ,Virulence ,Bordetella ,Science ,Intracellular Space ,General Physics and Astronomy ,Epithelial Cells ,General Chemistry ,Sequence Analysis, DNA ,General Biochemistry, Genetics and Molecular Biology ,Microscopy, Electron, Transmission ,RNA, Ribosomal, 16S ,Host-Pathogen Interactions ,Animals ,Intestinal Mucosa ,Rhabditoidea ,Cell Division ,Genome, Bacterial ,In Situ Hybridization, Fluorescence ,Metabolic Networks and Pathways ,Phylogeny - Abstract
Intracellular pathogens are challenged with limited space and resources while replicating in a single host cell. Mechanisms for direct invasion of neighboring host cells have been discovered in cell culture, but we lack an understanding of how bacteria directly spread between host cells in vivo. Here, we describe the discovery of intracellular bacteria that use filamentation for spreading between the intestinal epithelial cells of a natural host, the rhabditid nematode Oscheius tipulae. The bacteria, which belong to the new species Bordetella atropi, can infect the nematodes following a fecal-oral route, and reduce host life span and fecundity. Filamentation requires UDP-glucose biosynthesis and sensing, a highly conserved pathway that is used by other bacteria to detect rich conditions and inhibit cell division. Our results indicate that B. atropi uses a pathway that normally regulates bacterial cell size to trigger filamentation inside host cells, thus facilitating cell-to-cell dissemination.
- Published
- 2021
16. Adequacy of maternal iron status protects against behavioral, neuroanatomical, and growth deficits in fetal alcohol spectrum disorders.
- Author
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Echoleah S Rufer, Tuan D Tran, Megan M Attridge, Matthew E Andrzejewski, George R Flentke, and Susan M Smith
- Subjects
Medicine ,Science - Abstract
Fetal alcohol spectrum disorders (FASD) are the leading non-genetic cause of neurodevelopmental disability in children. Although alcohol is clearly teratogenic, environmental factors such as gravidity and socioeconomic status significantly modify individual FASD risk despite equivalent alcohol intake. An explanation for this variability could inform FASD prevention. Here we show that the most common nutritional deficiency of pregnancy, iron deficiency without anemia (ID), is a potent and synergistic modifier of FASD risk. Using an established rat model of third trimester-equivalent binge drinking, we show that ID significantly interacts with alcohol to impair postnatal somatic growth, associative learning, and white matter formation, as compared with either insult separately. For the associative learning and myelination deficits, the ID-alcohol interaction was synergistic and the deficits persisted even after the offsprings' iron status had normalized. Importantly, the observed deficits in the ID-alcohol animals comprise key diagnostic criteria of FASD. Other neurobehaviors were normal, showing the ID-alcohol interaction was selective and did not reflect a generalized malnutrition. Importantly ID worsened FASD outcome even though the mothers lacked overt anemia; thus diagnostics that emphasize hematological markers will not identify pregnancies at-risk. This is the first direct demonstration that, as suggested by clinical studies, maternal iron status has a unique influence upon FASD outcome. While alcohol is unquestionably teratogenic, this ID-alcohol interaction likely represents a significant portion of FASD diagnoses because ID is more common in alcohol-abusing pregnancies than generally appreciated. Iron status may also underlie the associations between FASD and parity or socioeconomic status. We propose that increased attention to normalizing maternal iron status will substantially improve FASD outcome, even if maternal alcohol abuse continues. These findings offer novel insights into how alcohol damages the developing brain.
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- 2012
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17. Maternal Iron Deficiency Worsens the Associative Learning Deficits and Hippocampal and Cerebellar Losses in a Rat Model of Fetal Alcohol Spectrum Disorders
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Shane M. Huebner, P.M. Crump, Echoleah S. Rufer, Susan M. Smith, and Tuan D. Tran
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medicine.medical_specialty ,Micronutrient deficiency ,Medicine (miscellaneous) ,Toxicology ,Hippocampus ,Article ,Pregnancy ,Cerebellum ,Internal medicine ,medicine ,Animals ,Hippocampus (mythology) ,Rats, Long-Evans ,Anemia, Iron-Deficiency ,Ethanol ,Association Learning ,Classical conditioning ,Micronutrient ,medicine.disease ,Conditioning, Eyelid ,Rats ,Associative learning ,Disease Models, Animal ,Psychiatry and Mental health ,Endocrinology ,Animals, Newborn ,Eyeblink conditioning ,Fetal Alcohol Spectrum Disorders ,Female ,Analysis of variance ,Psychology ,Neuroscience - Abstract
Background Gestational alcohol exposure causes lifelong physical and neurocognitive deficits collectively referred to as fetal alcohol spectrum disorders (FASDs). Micronutrient deficiencies are common in pregnancies of alcohol-abusing women. Here we show the most common micronutrient deficiency of pregnancy—iron deficiency without anemia—significantly worsens neurocognitive outcomes following perinatal alcohol exposure. Methods Pregnant rats were fed iron-deficient (ID) or iron-sufficient diets from gestational day 13 to postnatal day (P) 7. Pups received alcohol (0, 3.5, 5.0 g/kg) from P 4 to P 9, targeting the brain growth spurt. At P 32, learning was assessed using delay or trace eyeblink classical conditioning (ECC). Cerebellar interpositus nucleus (IPN) and hippocampal CA1 cellularity was quantified using unbiased stereology. Results Global analysis of variance revealed that ID and alcohol separately and significantly reduced ECC learning with respect to amplitude (ps ≤ 0.001) and conditioned response [CR] percentage (ps ≤ 0.001). Iron and alcohol interacted to reduce CR percentage in the trace ECC task (p = 0.013). Both ID and alcohol significantly reduced IPN (ps
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- 2015
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18. Choline supplementation mitigates trace, but not delay, eyeblink conditioning deficits in rats exposed to alcohol during development
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Jennifer D. Thomas and Tuan D. Tran
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Male ,Cognitive Neuroscience ,Conditioning, Classical ,Physiology ,Alcohol ,Article ,Choline ,Developmental psychology ,chemistry.chemical_compound ,Animals ,Hippocampus (mythology) ,Rats, Long-Evans ,Ethanol ,Classical conditioning ,Conditioning, Eyelid ,Rats ,chemistry ,Eyeblink conditioning ,Alcohols ,Conditioning ,Female ,Psychology ,Neuroscience ,Choline chloride - Abstract
Children exposed to alcohol prenatally suffer from a range of physical, neuropathological and behavioral alterations, referred to as Fetal Alcohol Spectrum Disorders (FASD). Both the cerebellum and hippocampus are affected by alcohol exposure during development, which may contribute to behavioral and cognitive deficits observed in children with FASD. Despite the known neuropathology associated with prenatal alcohol exposure, many pregnant women continue to drink (heavy drinkers, in particular), creating a need to identify effective treatments for their children who are adversely affected by alcohol. We previously reported that choline supplementation can mitigate alcohol’s effects on cognitive development, specifically on tasks which depend on the functional integrity of the hippocampus. The present study examined whether choline supplementation could differentially mitigate ethanol’s effects on trace eyeblink classical conditioning (a hippocampal-dependent task) and delay eyeblink classical conditioning (a cerebellar-dependent task). Long-Evans rats were exposed to 5.25 g/kg/day alcohol via gastric intubation from postnatal days (PD) 4-9, a period of brain development equivalent to late gestation in humans. A sham-intubated control group was included. From PD 10-30, subjects received subcutaneous injections of 100 mg/kg choline chloride or vehicle. Beginning on PD 32-34, subjects were trained on either delay or trace eyeblink conditioning. Performance of subjects exposed to alcohol was significantly impaired on both tasks, as indicated by significant reductions in percentage and amplitude of conditioned eyeblink responses, an effect that was attenuated by choline supplementation on the trace, but not delay conditioning task. Indeed, ethanol-exposed subjects treated with choline performed at control levels on the trace eyeblink conditioning task. There were no significant main or interactive effects of sex. These data indicate that choline supplementation can significantly reduce the severity of trace eyeblink conditioning deficits associated with early alcohol exposure, even when administered after the alcohol insult is complete. These findings have important implications for the treatment of fetal alcohol spectrum disorders.
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- 2011
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19. Binge-like ethanol exposure during the early postnatal period impairs eyeblink conditioning at short and long CS–US intervals in rats
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Tuan D. Tran, Charles R. Goodlett, and Mark E. Stanton
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Periodicity ,Time Factors ,Alcohol Drinking ,Period (gene) ,Fetal alcohol syndrome ,Random Allocation ,Behavioral Neuroscience ,Developmental Neuroscience ,Conditioning, Psychological ,Developmental and Educational Psychology ,Binge ethanol ,medicine ,Animals ,Rats, Long-Evans ,Blinking ,Ethanol ,Electromyography ,Interstimulus interval ,Age Factors ,Central Nervous System Depressants ,Classical conditioning ,Ethanol exposure ,medicine.disease ,Rats ,Animals, Newborn ,Eyeblink conditioning ,Anesthesia ,Conditioning ,Psychology ,Developmental Biology - Abstract
Binge-like ethanol exposure on postnatal days (PD) 4–9 in rodents causes cerebellar cell loss and impaired acquisition of conditioned responses (CRs) during “short-delay” eyeblink classical conditioning (ECC), using optimal (280–350 ms) interstimulus intervals (ISIs). We extended those earlier findings by comparing acquisition of delay ECC under two different ISIs. From PD 4 to 9, rats were intubated with either 5.25 g/kg of ethanol (2/day), sham intubated, or were not intubated. They were then trained either as periadolescents (about PD 35) or as adults (>PD 90) with either the optimal short-delay (280-ms) ISI, a long-delay (880-ms) ISI, or explicitly unpaired CS and US presentations. Neonatal binge ethanol treatment significantly impaired acquisition of conditioning at both ages regardless of ISI, and deficits in the acquisition and expression of CRs were comparable across ISIs. These deficits are consistent with the previously documented ethanol-induced damage to the cerebellar–brainstem circuit essential for Pavlovian ECC. © 2007 Wiley Periodicals, Inc. Dev Psychobiol 49: 589-605, 2007.
- Published
- 2007
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20. Critical periods for ethanol-induced cell loss in the hippocampal formation
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Tuan D. Tran and Sandra J. Kelly
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Male ,medicine.medical_specialty ,Time Factors ,Rodent ,Fetal alcohol syndrome ,Cell Count ,Stereology ,Hippocampal formation ,Toxicology ,Hippocampus ,Cellular and Molecular Neuroscience ,Developmental Neuroscience ,Pregnancy ,biology.animal ,Internal medicine ,Animals ,Medicine ,Rats, Long-Evans ,Neurons ,Cell Death ,Ethanol ,Staining and Labeling ,biology ,business.industry ,Dentate gyrus ,Central Nervous System Depressants ,Anatomy ,medicine.disease ,Teratology ,Rats ,Disease Models, Animal ,Endocrinology ,Animals, Newborn ,nervous system ,Fetal Alcohol Spectrum Disorders ,Prenatal Exposure Delayed Effects ,Toxicity ,Gestation ,Female ,business - Abstract
Rodent models of fetal alcohol syndrome (FAS) have revealed discrepant findings in ethanol's (EtOH) ability to alter the survival of principal neurons within hippocampal areas CA1, CA3 and the dentate gyrus (DG). One issue is the lack of systematic examination of the timing of EtOH exposure over key periods of hippocampal cell development. The present study examined whether systematic developmental EtOH exposure produces long-term hippocampal cell loss that is related to a specific time course in which either generation, migration or synaptogenic events in this neural region occurs. EtOH treatment occurred during the periods equivalent to the first, second, third and all three trimesters in humans using similar administration procedures for both mothers and pups. Unbiased stereological estimates of the total number of pyramidal and granule cells within hippocampal regions CA1, CA3 and DG were performed when rats reached adulthood. The findings confirm previous reports that area CA1 is highly susceptible to EtOH exposure that occurs during either the early neonatal period or all three trimesters equivalent, while areas CA3 and DG are more resistant to EtOH-induced insult during all periods of hippocampal development examined.
- Published
- 2003
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21. Neonatal ethanol produces cerebellar deep nuclear cell loss and correlated disruption of eyeblink conditioning in adult rats
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John T. Green, Charles R. Goodlett, Joseph E. Steinmetz, and Tuan D. Tran
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Male ,Cerebellum ,medicine.medical_specialty ,Purkinje cell ,Central nervous system ,Cell Count ,chemistry.chemical_compound ,Internal medicine ,medicine ,Animals ,Rats, Long-Evans ,Molecular Biology ,Neurons ,Ethanol ,Cell Death ,business.industry ,General Neuroscience ,Classical conditioning ,Conditioning, Eyelid ,Cell loss ,Rats ,medicine.anatomical_structure ,Endocrinology ,Animals, Newborn ,Cerebellar Nuclei ,chemistry ,Eyeblink conditioning ,Anesthesia ,Conditioning ,Female ,Neurology (clinical) ,business ,Developmental Biology - Abstract
Binge-like neonatal exposure to ethanol (EtOH) in rats, during the period of brain development comparable to that of the human third trimester, produces significant, dose-dependent Purkinje cell loss in the cerebellum and deficits in eyeblink classical conditioning. There are currently no published reports of whether neuronal loss in the cerebellar deep nuclei also results from binge-like neonatal exposure to EtOH and what the functional consequences of any cell loss might be. Since eyeblink conditioning requires cerebellar deep nuclear cells for normal learning to occur, we examined the effects of binge-like neonatal EtOH exposure on the total number of deep nuclear cells and eyeblink conditioning in adult rats. Group Ethanol (n=11) received EtOH doses of 5.25 g/kg/day on postnatal days 4-9, producing average peak blood alcohol concentrations of 363 mg/dl. Group Sham Intubated (n=11) underwent acute intragastric intubation on postnatal days 4-9 but did not receive any EtOH infusions. Group Unintubated Control (n=10) did not receive any intubations. When rats were at least 3 months old, they received either paired eyeblink conditioning or unpaired training. Following training, estimates of the total number of cerebellar deep nuclear cells were obtained using the optical fractionator, an unbiased stereological counting procedure. Rats in Group Ethanol had approximately 50% fewer deep nuclear cells compared to rats in Groups Sham Intubated and Unintubated Control, which did not differ. For 21 rats that received paired eyeblink conditioning, a highly significant correlation (+0.80) was found between the number of deep nuclear cells and learning rate in eyeblink conditioning.
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- 2002
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22. Critical periods for the effects of alcohol exposure on brain weight, body weight, activity and investigation
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Kim Cronise, Melissa D. Marino, William Jenkins, Sandra J. Kelly, and Tuan D. Tran
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Male ,medicine.medical_specialty ,Period (gene) ,Central nervous system ,Fetal alcohol syndrome ,Alcohol ,Motor Activity ,Biology ,Alcohol exposure ,Body weight ,Behavioral Neuroscience ,chemistry.chemical_compound ,Internal medicine ,medicine ,Animals ,Rats, Long-Evans ,Ethanol ,Body Weight ,Brain ,Central Nervous System Depressants ,medicine.disease ,Rats ,medicine.anatomical_structure ,Endocrinology ,chemistry ,Exploratory Behavior ,Microcephaly ,Gestation ,Female ,Brain weight - Abstract
Using an animal model of fetal alcohol syndrome - which equates peak blood alcohol concentrations across different developmental periods - critical periods for the effect of alcohol on brain weight, activity and investigative behavior were examined. The periods of alcohol exposure were from gestational day (GD) 1 through 10, GD 11 through 22, postnatal day (PD) 2 through 10, or all three periods combined. The critical period of alcohol exposure for an increase in activity in juveniles was GD 11 through 22. This pattern was not seen in the same animals in adulthood; instead, increases in both activity and investigation were seen in animals exposed from PD 2 through 10 and not seen in animals exposed during all three periods combined. Brain weight was reduced by alcohol exposure from GD 11 through 22, PD 2 through 10 and all three periods combined. The period from PD 2 through 10 was the only period when the brain weight to body weight ratio was reduced. In conclusion, exposure to alcohol during the periods in the latter half of gestation or early postnatal period seem to have the most deleterious effects on the brain, activity and investigation in the rat. In addition, the effects of alcohol exposure over both the prenatal and postnatal period cannot be easily predicted from the effects of shorter periods of exposure.
- Published
- 2000
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23. Alterations in hippocampal and hypothalamic monoaminergic neurotransmitter systems after alcohol exposure during all three trimester equivalents in adult rats
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Tuan D. Tran and Sandra J. Kelly
- Subjects
Male ,medicine.medical_specialty ,Central nervous system ,Hypothalamus ,Fetal alcohol syndrome ,Hippocampal formation ,Biology ,Hippocampus ,Norepinephrine ,chemistry.chemical_compound ,Sex Factors ,Pregnancy ,Internal medicine ,Monoaminergic ,medicine ,Animals ,Neurotransmitter ,Biological Psychiatry ,Ethanol ,Body Weight ,Central Nervous System Depressants ,Hydroxyindoleacetic Acid ,medicine.disease ,Rats ,Psychiatry and Mental health ,medicine.anatomical_structure ,Endocrinology ,Neurology ,chemistry ,Catecholamine ,Female ,Neurology (clinical) ,Serotonin ,medicine.drug - Abstract
Animal models of Fetal Alcohol Syndrome (FAS) often rely on exposing the developing organism to alcohol during either the prenatal or postnatal period only. Very few studies have examined brain changes resulting from alcohol exposure during both the prenatal and postnatal period, a period which is equivalent to all three trimesters in humans. In this study, we examined the effects of alcohol exposure during this prolonged period of neural development on hippocampal and hypothalamic neurotransmitters in the rat. Pregnant dams were intubated with alcohol from gestational day (GD) 1 to GD 22 and then their pups were intubated with alcohol from postnatal day (PD) 2 to PD 10. Alcohol-exposed rats of both sexes exhibited increased hippocampal noradrenaline (NE) concentration compared to intubated and nontreated control animals. Within the hypothalamus, alcohol-exposed females but not males exhibited increased NE concentration. Hypothalamic serotonin (5-HT) concentration was reduced in both alcohol-exposed and intubated-control rats compared to nontreated controls. The results suggest that both the hippocampal and hypothalamic NE systems are especially vulnerable to alcohol insult that occurs during a period of neural development that corresponds to the full human prenatal period. alcohol syndrome, hippocampus, hypothalamus
- Published
- 1999
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24. Alcohol exposure during development alters social recognition and social communication in rats
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Sandra J. Kelly and Tuan D. Tran
- Subjects
Male ,medicine.medical_specialty ,medicine.medical_treatment ,Fetal alcohol syndrome ,Physiology ,Toxicology ,Food Preferences ,Cellular and Molecular Neuroscience ,chemistry.chemical_compound ,Developmental Neuroscience ,Pregnancy ,Avoidance Learning ,medicine ,Animals ,Intubation ,Juvenile ,Social Behavior ,Intubation, Gastrointestinal ,Social communication ,Ethanol ,Body Weight ,Central Nervous System Depressants ,medicine.disease ,Social relation ,Social recognition ,Rats ,Surgery ,Animal Communication ,chemistry ,Taste ,Toxicity ,Female ,Psychology ,Alcohol-Related Disorders - Abstract
The present study examined the effects of postnatal alcohol exposure via gastric intubation on social communication of diet preference and social recognition. Rats were placed in one of three treatment groups. All treatments occurred from postnatal day (PD) 2 through 10 and Experiments 1 and 2 were conducted when the rats reached 60 and 100 days of age, respectively. Alcohol-exposed pups received a 3.0 g/kg dose of ethanol in milk solution that was delivered by insertion of PE-10 tubing down the esophagus daily from PD 2 through 10. Intubated control animals underwent intubation without ethanol or milk. Nontreated control pups were weighed daily. In Experiment 1, a nonexperimental rat was initially given access to lab chow mixed with a spice and then housed with an experimental rat for 30 min. The experimental rat was subsequently given access to two diets—one that the nonexperimental rat had consumed and a novel diet. It was found that the alcohol-exposed females consumed a greater percent of the communicated diet than the control females. In Experiment 2, the experimental rats were first exposed to a juvenile for 5 min and then exposed to the same juvenile after a delay of 30 or 90 min. Investigation time was recorded in both sessions and a reduction of investigation time in the second session is an indicator of social recognition memory. Alcohol-exposed rats of both sexes had poorer memory of a juvenile than both control groups after a 90-min delay. Together, these data indicate that basic components of social behavior may be altered by alcohol exposure during development.
- Published
- 1997
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25. Comparison of compound and cross-modal training on postoperative visual relearning of visual decorticate rats
- Author
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Eugene R. Delay and Tuan D. Tran
- Subjects
Male ,medicine.medical_specialty ,genetic structures ,medicine.medical_treatment ,education ,Audiology ,Discrimination Learning ,Rats, Sprague-Dawley ,Behavioral Neuroscience ,Avoidance Learning ,medicine ,Animals ,Operant conditioning ,Discrimination learning ,Sensory cue ,Lighting ,Visual Cortex ,Electroshock ,Decortication ,Rats ,Visual cortex ,medicine.anatomical_structure ,Acoustic Stimulation ,Visual discrimination ,Visual Perception ,Conditioning ,Cues ,Transfer of learning ,Psychology ,Neuroscience ,psychological phenomena and processes - Abstract
The effects of postoperative bimodal compound conditioning and cross-modal transfer of learning on behavior were compared by training rats prior to visual decortication to avoid shock with visual intensity cues. On Postop Day 6, rats were given avoidance training in one of three cue conditions: auditory intensity cues (cross-modal), paired auditory and visual cues (compound conditioning), or no cues (no-training control). On Postop Day 7 rats in the no-training control and the cross-modal transfer conditions were retrained with the visual discrimination while rats in the compound conditioning group were either retrained with the visual intensity cue or trained with the auditory intensity cue. Postoperative cross-modal transfer training enhanced visual relearning whereas bimodal compound conditioning interfered with relearning. However, compound conditioning facilitated subsequent auditory discrimination learning. These results support the notion of an injury-induced neurological bias that is increased after bimodal compound conditioning and reduced after cross-modal training. Potential implications for neurological rehabilitation are also discussed.
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- 1996
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26. Transfer of visual and haptic maze learning in rats
- Author
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Laura C. Adducci, Eugene R. Delay, Liza D. DeBartolo, Beth A. Bower, and Tuan D. Tran
- Subjects
Transfer test ,Communication ,medicine.medical_specialty ,Modality (human–computer interaction) ,business.industry ,education ,Maze learning ,Experimental and Cognitive Psychology ,Audiology ,Behavioral Neuroscience ,Neuropsychology and Physiological Psychology ,Transfer (computing) ,Positive transfer ,medicine ,Animal Science and Zoology ,Transfer of learning ,business ,Psychology ,psychological phenomena and processes ,General Psychology ,Haptic technology - Abstract
Cross-modal transfer of learning between black/white and rough/smooth discrimination tasks was studied in a two-choice maze procedure in which the stimuli for both discriminations were located on the floor of the maze. Rats were trained initially with cues of one modality and then given transfer training with cues of the second modality. The amount of transfer produced by two criteria of learning, 9 correct responses in 10 trials and 18 correct responses in 20 trials, was also studied. Bidirectional cross-modal transfer of learning was demonstrated more clearly with the more stringent learning criteria. These positive transfer effects appeared primarily to be the result of general transfer processes.
- Published
- 1994
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27. Vitamin E does not protect against neonatal ethanol-induced cerebellar damage or deficits in eyeblink classical conditioning in rats
- Author
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Kristin H. Horn, Charles R. Goodlett, Holly D. Jackson, and Tuan D. Tran
- Subjects
Male ,endocrine system ,medicine.medical_specialty ,Cerebellum ,medicine.medical_treatment ,Medicine (miscellaneous) ,Cerebellar Purkinje cell ,Cell Count ,Brain damage ,Toxicology ,medicine.disease_cause ,Neuroprotection ,Pregnancy ,Internal medicine ,mental disorders ,medicine ,Animals ,Vitamin E ,Rats, Long-Evans ,reproductive and urinary physiology ,Ethanol ,business.industry ,Conditioning, Eyelid ,Rats ,Psychiatry and Mental health ,medicine.anatomical_structure ,Endocrinology ,Neuroprotective Agents ,Eyeblink conditioning ,Animals, Newborn ,Anesthesia ,Prenatal Exposure Delayed Effects ,Toxicity ,Female ,medicine.symptom ,business ,Oxidative stress - Abstract
Background: Rodent studies have shown that heavy binge-like ethanol (EtOH) exposure during the brain growth spurt [postnatal days (PD) 4-9] causes cerebellar neuronal loss and deficits in cerebellar-mediated eyeblink classical conditioning (ECC). Oxidative stress has been implicated in EtOH-mediated brain damage, and studies using vitamin E have reported amelioration of EtOH-induced tissue damage, including protection in rats against EtOH-induced cerebellar Purkinje cell (PC) loss on PD 4 to 5. The purpose of this study was to determine whether dietary supplementation with vitamin E concurrent with binge EtOH exposure on PD 4 to 9 in rats would attenuate the cerebellar cell death and ECC deficits. Methods: Rat pups were given one of five different neonatal treatments: (1) intubation with EtOH in milk formula (twice daily, total dose 5.25 g/kg/day), (2) intubation with EtOH in milk formula supplemented with vitamin E (12.26 mg/kg/feeding), (3) intubation with milk formula that contained vitamin E only, (4) sham intubations, or (5) normally reared unintubated controls. Between PD 26 and 33, subjects received short-delay ECC for 3 consecutive days. Unbiased stereological cell counts were performed on cerebellar PCs of left cerebellar lobules I to VI and neurons of the interpositus nucleus. In a separate study with PD 4 pups, the effects of vitamin E on EtOH-induced expression of caspase-3 active subunits were assessed using Western blot analysis. Results: EtOH-treated groups showed significant deficits in acquisition of conditioned eyeblink responses and reductions in cerebellar PCs and interpositus nucleus neurons compared with controls. Vitamin E supplementation failed to protect against these deficits. Vitamin E also failed to protect against increases in caspase-3 active subunit expression induced by acute binge EtOH exposure on PD 4. Conclusions: In contrast to the previously reported neuroprotective potential of antioxidants on EtOH-mediated cerebellar damage, vitamin E supplementation did not diminish EtOH-induced structural and functional damage to the cerebellum in this model of binge EtOH exposure during the brain growth spurt in rats.
- Published
- 2005
28. Experiments in cross-language medical information retrieval using a mixing translation module
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Tuan D, Tran, Nicolas, Garcelon, Anita, Burgun, and Pierre, Le Beux
- Subjects
Internet ,PubMed ,Information Storage and Retrieval ,Multilingualism ,Translating ,Unified Medical Language System - Abstract
Given the ever-increasing scale and diversity of medical literature widely published in English on the Internet, improving the performance of information retrieval by cross-language is an urgent research objective. Cross-language medical information retrieval (CLMIR) consists of providing a query in one language and searching medical document collections in one or more different languages. Our users of CLMIR are users who are able to read biomedical texts in English, but have difficulty formulating English queries. This paper proposes a French/English CLMIR system as a mixing model for supporting the retrieval of English medical documents. Methods fall into the category of query translation approach in which we use a hybrid machine translation that combines a pattern-based module with a rule-based translator and includes three steps from pre- to- post-translation. In parallel to this hybrid machine translation, we use multilingual UMLS Methasaurus as a complementary translator. The results show that using a mixing translation module outperforms machine translation-based method and thesaurus-based method used separately.
- Published
- 2004
29. Adequacy of Maternal Iron Status Protects against Behavioral, Neuroanatomical, and Growth Deficits in Fetal Alcohol Spectrum Disorders
- Author
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Matthew E. Andrzejewski, Susan M. Smith, George R. Flentke, Tuan D. Tran, Echoleah S. Rufer, and Megan M. Attridge
- Subjects
lcsh:Medicine ,Developmental and Pediatric Neurology ,Toxicology ,Pediatrics ,Cognition ,Child Development ,0302 clinical medicine ,Pregnancy ,Risk Factors ,lcsh:Science ,Maternal-Fetal Exchange ,reproductive and urinary physiology ,2. Zero hunger ,Teratology ,0303 health sciences ,Multidisciplinary ,Brain ,Anemia ,Iron Deficiencies ,Animal Models ,Hematology ,Iron deficiency ,female genital diseases and pregnancy complications ,3. Good health ,Infectious Diseases ,Fetal Alcohol Spectrum Disorders ,Prenatal Exposure Delayed Effects ,Medicine ,Female ,Public Health ,Alcohol ,Research Article ,Neglected Tropical Diseases ,Neurotoxicology ,medicine.medical_specialty ,Binge drinking ,Gravidity ,Binge Drinking ,03 medical and health sciences ,Fetus ,Model Organisms ,medicine ,Animals ,Learning ,Iron Deficiency Anemia ,Psychiatry ,Biology ,Socioeconomic status ,Nutrition ,030304 developmental biology ,Ethanol ,business.industry ,lcsh:R ,medicine.disease ,Nutritional Diseases ,Rats ,Associative learning ,Pregnancy Complications ,Disease Models, Animal ,Malnutrition ,Animals, Newborn ,Iron-deficiency anemia ,Rat ,lcsh:Q ,business ,Organism Development ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Fetal alcohol spectrum disorders (FASD) are the leading non-genetic cause of neurodevelopmental disability in children. Although alcohol is clearly teratogenic, environmental factors such as gravidity and socioeconomic status significantly modify individual FASD risk despite equivalent alcohol intake. An explanation for this variability could inform FASD prevention. Here we show that the most common nutritional deficiency of pregnancy, iron deficiency without anemia (ID), is a potent and synergistic modifier of FASD risk. Using an established rat model of third trimester-equivalent binge drinking, we show that ID significantly interacts with alcohol to impair postnatal somatic growth, associative learning, and white matter formation, as compared with either insult separately. For the associative learning and myelination deficits, the ID-alcohol interaction was synergistic and the deficits persisted even after the offsprings' iron status had normalized. Importantly, the observed deficits in the ID-alcohol animals comprise key diagnostic criteria of FASD. Other neurobehaviors were normal, showing the ID-alcohol interaction was selective and did not reflect a generalized malnutrition. Importantly ID worsened FASD outcome even though the mothers lacked overt anemia; thus diagnostics that emphasize hematological markers will not identify pregnancies at-risk. This is the first direct demonstration that, as suggested by clinical studies, maternal iron status has a unique influence upon FASD outcome. While alcohol is unquestionably teratogenic, this ID-alcohol interaction likely represents a significant portion of FASD diagnoses because ID is more common in alcohol-abusing pregnancies than generally appreciated. Iron status may also underlie the associations between FASD and parity or socioeconomic status. We propose that increased attention to normalizing maternal iron status will substantially improve FASD outcome, even if maternal alcohol abuse continues. These findings offer novel insights into how alcohol damages the developing brain.
- Published
- 2012
- Full Text
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30. Genomic and phenotypic evolution of nematode-infecting microsporidia.
- Author
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Lina Wadi, Hala Tamim El Jarkass, Tuan D Tran, Nizar Islah, Robert J Luallen, and Aaron W Reinke
- Subjects
Immunologic diseases. Allergy ,RC581-607 ,Biology (General) ,QH301-705.5 - Abstract
Microsporidia are a large phylum of intracellular parasites that can infect most types of animals. Species in the Nematocida genus can infect nematodes including Caenorhabditis elegans, which has become an important model to study mechanisms of microsporidia infection. To understand the genomic properties and evolution of nematode-infecting microsporidia, we sequenced the genomes of nine species of microsporidia, including two genera, Enteropsectra and Pancytospora, without any previously sequenced genomes. Core cellular processes, including metabolic pathways, are mostly conserved across genera of nematode-infecting microsporidia. Each species encodes unique proteins belonging to large gene families that are likely used to interact with host cells. Most strikingly, we observed one such family, NemLGF1, is present in both Nematocida and Pancytospora species, but not any other microsporidia. To understand how Nematocida phenotypic traits evolved, we measured the host range, tissue specificity, spore size, and polar tube length of several species in the genus. Our phylogenetic analysis shows that Nematocida is composed of two groups of species with distinct traits and that species with longer polar tubes infect multiple tissues. Together, our work details both genomic and trait evolution between related microsporidia species and provides a useful resource for further understanding microsporidia evolution and infection mechanisms.
- Published
- 2023
- Full Text
- View/download PDF
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