258 results on '"Upadhyay SK"'
Search Results
2. Identification of 1, 2, 4-Triazine and Its Derivatives against Lanosterol 14 - Demethylase (CYP51) Property of Candida Albicans: Influence on the Development of New Antifungal Therapeutic Strategies
- Author
-
Verma Ak, Ameta S, Vishwakarma Nk, Srivastava Ak, Alam M, Yadav Vk, Upadhyay Sk, Teli Pk, Bhojiya Aa, Harina H, Ashid M, Ahmed Sf, Hossain Ms, and Majid A
- Subjects
Antifungal ,biology ,medicine.drug_class ,Lanosterol ,medicinal_chemistry ,biology.organism_classification ,chemistry.chemical_compound ,chemistry ,Biochemistry ,medicine ,biology.protein ,Demethylase ,Candida albicans ,Triazine - Abstract
This research aims to find out whether the synthetic 1, 2, 4-triazine and its derivatives have antifungal effects and can protect humans from infection with Candida albicans. Molecular docking and molecular dynamic simulation are widely used in modern drug design to target a We are interested in using molecular docking and molecular dynamics modelling to investigate the interaction between the derivatives of 1, 2, 4-triazine and the resulting lanosterol 14 - demethylase (CYP51) of Candida albicans The inhibition of Candida albicans CYP51 is the main goal of our research. The 1, 2, 4-triazine and its derivatives have been docked to the CYP51 enzyme, which is involved in Candida albicans Multidrug Drug Resistance (MDR). Autodock tools were used to identifying the binding affinities of molecules against the target proteins. Compared to conventional fluconazole, the molecular docking results indicated that each drug has a high binding affinity for CYP51 proteins and forms unbound interactions and hydrogen bonds with their active residues and surrounding allosteric residues. The docking contacts were made using a 10 ns MD simulation with nine molecules. RMSD, RMSF, hydrogen bonds, and the Rg all confirm these conclusions. In addition, these compounds were expected to have a favorable pharmacological profile and low toxicity. The compounds are being offered as scaffolds for the development of new antifungal drugs and as candidates for future in vitro testing.
- Published
- 2021
- Full Text
- View/download PDF
3. Early Life Nutrition Deprivation and Mental Functions
- Author
-
D. K. Agarwal, Sonika Agarwal, K N Agarwal, and Upadhyay Sk
- Subjects
Gerontology ,Psychology ,Mental functions ,Early life - Published
- 2020
- Full Text
- View/download PDF
4. Bayesian Cross-Sectional Analysis of the Conditional Distrubution of Earnings of Men in the USA (1967-1996)
- Author
-
Upadhyay, SK, Singh, U, Dey, DK, Keane, M, Geweke, J, Upadhyay, SK, Singh, U, Dey, DK, Keane, M, and Geweke, J
- Published
- 2006
5. Impact of chronic undernutrition on higher mental functions in Indian boys aged 10–12 years
- Author
-
Agarwal, KN, primary, Agarwal, DK, additional, and Upadhyay, SK, additional
- Published
- 1995
- Full Text
- View/download PDF
6. Accelerated test system strength models based on Birnbaum-Saunders distribution: a complete Bayesian analysis and comparison.
- Author
-
Upadhyay SK, Mukherjee B, Gupta A, Upadhyay, S K, Mukherjee, Bhaswati, and Gupta, Ashutosh
- Abstract
Several models for studies related to tensile strength of materials are proposed in the literature where the size or length component has been taken to be an important factor for studying the specimens' failure behaviour. An important model, developed on the basis of cumulative damage approach, is the three-parameter extension of the Birnbaum-Saunders fatigue model that incorporates size of the specimen as an additional variable. This model is a strong competitor of the commonly used Weibull model and stands better than the traditional models, which do not incorporate the size effect. The paper considers two such cumulative damage models, checks their compatibility with a real dataset, compares them with some of the recent toolkits, and finally recommends a model, which appears an appropriate one. Throughout the study is Bayesian based on Markov chain Monte Carlo simulation. [ABSTRACT FROM AUTHOR]
- Published
- 2009
- Full Text
- View/download PDF
7. Anaemia and mental functions in rural primary school children
- Author
-
K N Agarwal, Upadhyay Sk, Divya Agarwal, Tripathi Am, and Singh Rd
- Subjects
Male ,Rural Population ,050103 clinical psychology ,Pediatrics ,medicine.medical_specialty ,Psychometrics ,Anemia ,India ,medicine ,Memory span ,Humans ,0501 psychology and cognitive sciences ,Attention ,Child ,Students ,Psychological Tests ,Intelligence quotient ,business.industry ,05 social sciences ,050301 education ,Wechsler Adult Intelligence Scale ,medicine.disease ,Test (assessment) ,Nutrition Disorders ,Malnutrition ,El Niño ,Pediatrics, Perinatology and Child Health ,Female ,business ,0503 education ,Clinical psychology - Abstract
Mental functions of 388 (6-8 years of age) rural primary school children matched for social and educational status were assessed in relation to anaemia and nutritional status. Malin's intelligence scale for Indian children and an arithmetic test were administered to assess intelligence, attention and concentration. No significant differences were found between the IQ scores of anaemic and non-anaemic groups, except for the subtest digit span. In contrast, there was an effect of nutritional status on IQ scores. Observations on the arithmetic test showed that anaemia is associated with lower levels of attention and concentration.
- Published
- 1989
8. Bayesian Cross-Sectional Analysis of the Conditional Distrubution of Earnings of Men in the USA (1967-1996)
- Author
-
Keane, M, Geweke, J, Upadhyay, SK, Singh, U, and Dey, DK
- Published
- 2006
9. Complementation with TaNCL2-A reinstates growth and abiotic stress response in atncl mutant of Arabidopsis.
- Author
-
Ishu, Shumayla, Madhu, and Upadhyay SK
- Abstract
The sodium/calcium exchanger-like (NCL) transporters are members of Ca
2+ /Cation antiporters (CaCAs) family, localized at the tonoplast, and primarily involved in Ca2+ homeostasis and stress response. They transport Ca2+ to the cytosol and sequester cytosolic Na+ into the vacuole. Therefore, the atncl mutant of Arabidopsis thaliana is prone to salinity stress. The functional complementation of TaNCL2-A of Triticum aestivum improved abiotic stress response and various morpho-physio-biochemical parameters in atncl mutant. The TaNCL2-A complementation increased the seed germination rate and root length of atncl mutant during salinity and drought stress conditions. The exogenous Ca2+ application further improved the stress tolerance in the complemented lines. The results suggested that the modulation of cytosolic Ca2+ by TaNCL2-A expression and/or exogenous Ca2+ application could reinstate growth and abiotic stress response in atncl mutant. TaNCL2-A also reduced the impact of ABA on seed germination. In addition, exogenous IAA induced lateral roots formation in all the lines. Biochemical and physiological analyses revealed increased proline, chlorophylls, carotenoids and relative water content (RWC), and reduced malondialdehyde (MDA), H2 O2 and relative electrical conductivity (REC) in TaNCL2-A complemented lines. The results highlighted the function of TaNCL2-A gene in stress response, and its potential application in crop improvement strategies in future studies., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. Declaration of Competing Interest The authors declare that they have no conflict of interest., (Copyright © 2025 Elsevier B.V. All rights reserved.)- Published
- 2025
- Full Text
- View/download PDF
10. Efficacy of molecularly diversified phosphorus-solubilizing rhizobacterial isolates in phytostimulation, antimicrobial attributes and phosphorus-transporter genes mediated plant growth performance in maize (Zea mays L.).
- Author
-
Sanadhya S, Jain D, Saheewala H, Sharma D, Chauhan PK, Singh G, Upadhyay SK, and Mohanty SR
- Abstract
This study evaluated a dual management approach to enhance plant-growth by improving soil fertility, reducing pathogenic stress using PGPR that affect phosphorus-transporter (pht) genes. Among 213 maize rhizobacterial isolates, 40 demonstrated the ability to solubilize tri-calcium phosphate, potassium, zinc, and silicon, showing various PGP traits. Nine of these isolates exhibited significant antagonistic activity against the plant pathogens Colletotrichum chlorophyti and Xanthomonas axonopodis. These pathogens cause root infection, reduces plant-immunity and growth. In pot experiments, these nine strains significantly improved root length, shoot length, chlorophyll content, fresh weight, proline, APX, CAT, GR, NPK, and Zn content in maize plants after 60 days under pathogenic stress. Notably, PSB-25 increased root length by up to 66% under C. chlorophyti stress and 64% under X. axonopodis stress. PSB21 enhanced proline content by 49%, APX by 70%, and GR by 41%, while PSB-16 raised CAT activity by 55% under X. axonopodis stress. Molecular diversity analysis of the 40 PS-RB strains using ERIC, BOX, REP, and ARDRA showed two major clusters with Jaccard coefficients from 0.72 to 1.00. 16S rRNA gene sequencing identified PSB10, PSB16, and PSB25 as Serratia sp., Enterobacter cloacae, and Enterobacter sp., respectively. The effects of PSB10, PSB16, and PSB25 on growth parameters under pathogen stress were also studied. Field trials indicated that treatment T6 (100% RDF + PSB16) was most effective in promoting plant growth. Additionally, significant differences in the expression of six Pht1 transporter genes were noted between PS-RB treated and untreated maize seedlings, and these genes improving phosphorus acquisition., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Dr Sudhir K Upadhyay reports was provided by Veer Bahadur Singh Purvanchal University. Dr Sudhir K Upadhyay reports a relationship with Veer Bahadur Singh Purvanchal University that includes:. Sudhir K Upadhyay has patent NA pending to NA. All the authors, namely Suman Sanadhya, Devendra Jain, Heena Saheewala, Deepak Sharma, Prabhat K. Chauhan, Sudhir K. Upadhyay, and Santosh Ranjan Mohanty, declare no potential conflict of interest. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2025 Elsevier Masson SAS. All rights reserved.)
- Published
- 2025
- Full Text
- View/download PDF
11. Decrypting proteomics, transcriptomics, genomics, and integrated omics for augmenting the abiotic, biotic, and climate change stress resilience in plants.
- Author
-
Choudhary R, Ahmad F, Kaya C, Upadhyay SK, Muneer S, Kumar V, Meena M, Liu H, Upadhyaya H, and Seth CS
- Abstract
As our planet faces increasing environmental challenges, such as biotic pressures, abiotic stressors, and climate change, it is crucial to understand the complex mechanisms that underlie stress responses in crop plants. Over past few years, the integration of techniques of proteomics, transcriptomics, and genomics like LC-MS, IT-MS, MALDI-MS, DIGE, ESTs, SAGE, WGS, GWAS, GBS, 2D-PAGE, CRISPR-Cas, cDNA-AFLP, HLS, HRPF, MPSS, CAGE, MAS, IEF, MudPIT, SRM/MRM, SWATH-MS, ESI have significantly enhanced our ability to comprehend the molecular pathways and regulatory networks, involved in balancing the ecosystem/ecology stress adaptation. This review offers thorough synopsis of the current research on utilizing these multi-omics methods (including metabolomics, ionomics) for battling abiotic (salinity, temperature (chilling/freezing/cold/heat), flood (hypoxia), drought, heavy metals/loids), biotic (pathogens like fungi, bacteria, virus, pests, and insects (aphids, caterpillars, moths, mites, nematodes) and climate change stress (ozone, ultraviolet radiation, green house gases, carbon dioxide). These strategies can expedite crop improvement, and act as powerful tools with high throughput and instant database generation rates. They also provide a platform for interpreting intricate, systematic signalling pathways and knowing how different environmental stimuli cause phenotypic responses at cellular and molecular level by changing the expression of stress-responsive genes like RAB18, KIN1, RD29B, OsCIPK03, OsSTL, SIAGL, bZIP, SnRK, ABF. This review discusses various case studies that exemplify the successful implementation of these omics tools to enhance stress tolerance in plants. Finally, it highlights challenges and future prospects of utilizing these approaches in combating stress, emphasizing the need for interdisciplinary collaborations and bio-technological advancements for sustainable agriculture and food security., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2025 Elsevier GmbH. All rights reserved.)
- Published
- 2025
- Full Text
- View/download PDF
12. Receptor Binding Domain-Specific B Cell Memory Responses Among Individuals Vaccinated Against SARS-CoV-2.
- Author
-
Athavale A, Gaur A, Ahmed N, Subramaniam A, Dandotiya J, Raj S, Upadhyay SK, Samal S, Pandey AK, Rai RC, and Awasthi A
- Abstract
Background : The COVID-19 pandemic prompted unprecedented vaccine development efforts against SARS-CoV-2. India, which was one of the countries most impacted by COVID-19, developed its indigenous vaccine in addition to utilizing the ones developed by other countries. While antibody levels and neutralizing antibody titres are considered initial correlates of immune protection, long-term protection from the pathogen relies on memory B and T cells and their recall responses. In this regard, global research has primarily focused on mRNA-based vaccines. The studies on immune memory response, particularly B cell memory response induced by the vaccines given to Indians, remain relatively obscure. Methods : We assessed Receptor Binding Domain-specific memory B cells in the peripheral circulation and their ability to secrete antigen-specific antibodies among Indians vaccinated with Covaxin (BBV152), Covishield (AZD1222), Corbevax (BECOV2D), and Sputnik Light, as well as unvaccinated individuals. Results : Corbevax and Sputnik Light conferred better antibody-secreting cell (ASC) responses over time compared to other groups. Conclusions : These findings contribute to our understanding of vaccine-induced immune memory in the Indian population; providing insights that could inform future vaccine strategies.
- Published
- 2024
- Full Text
- View/download PDF
13. Knowledge about handling hazardous materials as factors associated with adherence to healthcare waste management practices among waste handlers at government district hospitals of Madhesh province, Nepal: A quantitative-qualitative methods study.
- Author
-
Patel JN, Upadhyay SK, Rajbhandari A, Bhandari R, and Poudyal A
- Abstract
Healthcare Waste (HCW) is a special waste produced in healthcare institutions, including hospitals. It has a high potential for infection and injuries. The issue of waste disposal is growing as the number of hospitals, clinics, and diagnostic laboratories in Nepal continues to increase. The study aimed to assess the adherence to healthcare waste management (HCWM) practices and knowledge among waste handlers at the government district hospitals of Madhesh Province of Nepal which lies in the southern part of the country. A cross-sectional mixed-method study design was employed to assess the adherence of healthcare waste management practices and knowledge of healthcare waste management guideline among HCW handlers from 10 district-level hospitals in Madhesh Province. We developed a semi-structured questionnaire from Nepal's National HCWM Guideline 2014 and the World Health Organization HCWM Rapid Assessment Tool 2011, to interview 60 HCW handlers for quantitative information. Then 10 key informant interviews were conducted using KII guidelines with related stakeholders of district hospitals of Madhesh Province. A four-point Likert scale was used to assess the practices and knowledge of HCW handlers and health facility-related factors. Descriptive data analysis was presented in tables for frequency, percentage, mean, and standard deviation, and correlation was presented in Graphs. A thematic analysis was performed for qualitative data by using RQDA and discussing the findings before concluding the study. Among the sixty participants, the median age was thirty-five years while thirty percent were less than the median age. Among total participants, the majority of female were 65% and almost all of them (96.67%) were married. The majority (65%) were females and almost all (96.67%) were married. About one-third (36.67%) of participants were illiterate. Most of the participants had experience of 5 to 10 years. The mean adherence of HCWM was 74.88±9.66 SD. Among the participants, half of them had adequate knowledge while the median knowledge of HCWM was 39 and the inter-quartile range was 5 (q3 = 41, q1 = 36). The mean of the HCWM practice was 24.18±5.96. The median of health facilities-related factors was 13 and the interquartile range was 3 (q3 = 15 and q1 = 12). The full adherence to HCWM guideline 2014 was extremely low among healthcare waste handlers. The HCWs had less adequate knowledge of HCWM and they did not practice to manage HCW adequately in district hospitals. However, the hospitals had adequately provided amenities to manage healthcare waste., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2024 Patel et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
- Published
- 2024
- Full Text
- View/download PDF
14. Nanomaterials for intelligent CRISPR-Cas tools: improving environment sustainability.
- Author
-
Bahl E, Jyoti A, Singh A, Siddqui A, Upadhyay SK, Jain D, Shah MP, and Saxena J
- Subjects
- Clustered Regularly Interspaced Short Palindromic Repeats, Nanotechnology, CRISPR-Cas Systems, Gene Editing methods, Nanostructures
- Abstract
Clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein (Cas) is a desirable gene modification tool covering a wide area in various sectors of medicine, agriculture, and microbial biotechnology. The role of this incredible genetic engineering technology has been extensively investigated; however, it remains formidable with cargo choices, nonspecific delivery, and insertional mutagenesis. Various nanomaterials including lipid, polymeric, and inorganic are being used to deliver the CRISPR-Cas system. Progress in nanomaterials could potentially address these challenges by accelerating precision targeting, cost-effectiveness, and one-step delivery. In this review, we highlighted the advances in nanotechnology and nanomaterials as smart delivery systems for CRISPR-Cas so as to ameliorate applications for environmental remediation including biomedical research and healthcare, strategies for mitigating antimicrobial resistance, and to be used as nanofertilizers for enhancing crop growth, and reducing the environmental impact of traditional fertilizers. The timely co-evolution of nanotechnology and CRISPR technologies has contributed to smart novel nanostructure hybrids for improving the onerous tasks of environmental remediation and biological sustainability., Competing Interests: Declarations. Ethics approval: Ethical approval is not applicable as this study does not involve human beings or animals. Consent to participate: Not applicable as this study does not involve human beings or animals. Consent for publication: Not applicable for the present study. Competing interests: The authors declare no competing interests., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
- Published
- 2024
- Full Text
- View/download PDF
15. Exploring the potential of lactic acid bacteria and its molecular mechanism of action in the development of biosurfactants: Current finding and future outlook.
- Author
-
Thakur B, Kaur S, Tripathi M, and Upadhyay SK
- Subjects
- Glycolipids chemistry, Glycolipids metabolism, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents chemistry, Anti-Bacterial Agents biosynthesis, Humans, Oleic Acids, Surface-Active Agents metabolism, Surface-Active Agents pharmacology, Surface-Active Agents chemistry, Lactobacillales metabolism, Lactobacillales genetics
- Abstract
Biosurfactants generated from lactic acid bacteria (LAB) offer an advantage over standard microbial surfactants due to their antifungal, antibacterial and antiviral capabilities. Many LAB strains have been related to the manufacture of biosurfactant, an essential chemical with uses in the treatment of a number of illnesses. Furthermore, their effectiveness as anti-adhesive agents against a diverse variety of pathogens proves their utility as anti-adhesive coating agents for medical insertional materials, reducing hospital infections without the need of synthetic drugs and chemicals. LAB produces both low and high molecular weight biosurfactants. Biosurfactants from L. pentosus , L. gasseri and L. jensenii have been reported to produce glycolipopeptides that comprise carbohydrates, proteins and lipids in the ratio of 1:3:6 with palmitic, stearic acid, and linoelaidic acid as the major fatty acid component, whereas L. plantarum has been reported to make surlactin due to the presence of non-ribosomal peptide synthetase genes (NRPS) genes. Antimicrobial activity of sophorolipids and rhamnolipids generated from LAB against B. subtilis , P. aeruginosa , S. epidermidis , Propionibacterium acnes and E. coli has been demonstrated. The safety of biosurfactants is being evaluated in compliance with a number of regulatory standards that emphasize the importance of safety in the pharmaceutical industry. This review attempts, for the first time, to provide a comprehensive evaluation of several approaches for the synthesis of biosurfactant-mediated molecular modulation in terms of their biological value. Future biosurfactant directions, as well as regulatory considerations that are crucial for the synthesis of biosurfactants from novel LAB, have also been explored.
- Published
- 2024
- Full Text
- View/download PDF
16. TaCCS1-B expression modulates copper, enzymatic antioxidants and polyphenols contents and provides abiotic stress tolerance in transgenic Arabidopsis.
- Author
-
Tyagi S, Shumayla, Singh S, Pandey A, and Upadhyay SK
- Subjects
- Oxidative Stress, Plant Proteins genetics, Plant Proteins metabolism, Triticum genetics, Triticum physiology, Triticum metabolism, Hydrogen Peroxide metabolism, Malondialdehyde metabolism, Arabidopsis genetics, Arabidopsis physiology, Plants, Genetically Modified, Antioxidants metabolism, Copper metabolism, Polyphenols metabolism, Stress, Physiological genetics, Gene Expression Regulation, Plant
- Abstract
Abiotic stress, including osmotic and salinity stress, significantly affects plant growth and productivity. Copper chaperone for superoxide dismutase (CCS) is essential for copper homeostasis and oxidative stress management. In this study, we investigated the role of the TaCCS1-B gene of bread wheat in enhancing stress tolerance in yeast and transgenic Arabidopsis. Expression of TaCCS1-B increased abiotic stress tolerance in recombinant yeast cells. Phenotypic analysis of Arabidopsis TaCCS1-B expressing lines demonstrated that they exhibited significantly higher germination rates, increased root length and better growth under osmotic and salinity stress than wild type. Additionally, the transgenic lines exhibited higher copper accumulation and enhanced photosynthetic pigments and proline level, coupled with reduced hydrogen peroxide (H₂O₂) and malondialdehyde (MDA) contents. They also showed higher enzymatic antioxidants' activities, indicating reduced oxidative stress in transgenic lines, resulting in reduced flavonoid content. Gene expression analysis indicated modulated expression of stress-responsive genes in the transgenic lines under stress conditions. These findings suggested the role of TaCCS1-B in enhancing stress tolerance by improving copper homeostasis and regulating key stress-responsive genes. This study highlights the potential of TaCCS1-B for the development of better stress resilience crops, which is critical for sustaining agricultural productivity for food security under adverse environmental conditions., (© 2024 Scandinavian Plant Physiology Society.)
- Published
- 2024
- Full Text
- View/download PDF
17. Hyposalivation in patients with psoriasis: Association with severity, inflammatory, and anti-inflammatory cytokine biomarkers of the disease.
- Author
-
Sharma RK, Sharma MR, Mahendra A, Singh S, Sood S, Upadhyay SK, and Sharma AK
- Subjects
- Humans, Male, Female, Adult, Middle Aged, Saliva metabolism, Saliva chemistry, Xerostomia metabolism, Severity of Illness Index, Inflammation metabolism, Psoriasis metabolism, Cytokines metabolism, Cytokines analysis, Biomarkers analysis, Biomarkers metabolism
- Abstract
The aim of the study is to expound the effect of psoriasis on salivary glands by evaluating the secretion of saliva and salivary cytokine biomarkers in patients with psoriasis. This study was conducted by recruiting 120 subjects that included 60 patients diagnosed clinically with active psoriasis and 60 healthy controls who were age and gender matched to psoriatic subjects. Unstimulated whole saliva was collected from all the subjects by spitting method, and levels of tumor necrosis factor-alpha (TNF-α), interferon-gamma (IFN-γ), interleukin-2 (IL-2), and IL-10 (IL-10) were determined via enzyme-linked immunosorbent assay (BT Lab, Shanghai, China). Secretion of saliva in psoriasis patients was considerably reduced than in healthy controls. The concentrations of pro-inflammatory cytokines (TNF-α, IFN-γ, and IL-2) were significantly increased, whereas level of anti-inflammatory cytokine (IL-10) was markedly decreased in the saliva of psoriasis patients with hyposalivation compared to healthy subjects. Our results demonstrated significant negative correlation of salivary flow rates with the disease severity. No significant correlations were obtained between salivary levels of tested cytokines and salivary flow rates in our study. Findings of the study reflect inflammation of salivary glands with reduced salivary flow rates in psoriasis patients. The inflammatory responses in salivary gland tissues by virtue of increased pro-inflammatory cytokines concentrations together with lower anti-inflammatory cytokine levels may have a role in affecting the saliva secretion in psoriasis patients. Secretion of unstimulated saliva in psoriasis patients decreases with the severity and duration of the disease., (© 2024 International Union of Biochemistry and Molecular Biology, Inc.)
- Published
- 2024
- Full Text
- View/download PDF
18. Optimization of polyamine and mycorrhiza in sorghum plant for removal of hazardous cadmium.
- Author
-
Kumar P, Dwivedi P, and Upadhyay SK
- Subjects
- Soil Pollutants metabolism, Biodegradation, Environmental, Sorghum metabolism, Sorghum microbiology, Sorghum drug effects, Cadmium metabolism, Mycorrhizae physiology, Polyamines metabolism
- Abstract
Eco-friendly and sustainable practices must be followed while using the right plants and microbes to remove harmful heavy metals from the soil. The goal of the current study was to ascertain how effectively sorghum plants removed cadmium (Cd) from the soil using polyamines and mycorrhiza. Plant-biochemicals such as free amino acids, ascorbic acids, anthocyanin, proline, and catalase, APX, peroxidase activities were considered as markers in this study which revealed the adverse plant growth performance under 70 and 150 ppm of Cd concentration (w/w) after 30,60, and 90 days of treatment. The plants showed a mitigating effect against high Cd-concentration with exogenous use of mycorrhiza and putrescine. The treatment T17 (mycorrhiza +5 mM putrescine) showed a substantial decrease in the content of total free amino acid, ascorbic acid, catalase, APX, peroxidase by 228.36%, 39.79%, 59.06%, 182.79% 106.97%, respectively after 90 days as compared to T12 (150 ppm Cd). Anthocyanin content was negatively correlated (-0.503, -0.556, and -0.613) at p < 0.01 with other studied markers, with an increase by 10.52% in T17 treated plant as compared to T12. The concentration of Cd in root increased by 49.6% (141 ppm) and decreased in the shoot by 71% (17.8 ppm) in T17 treated plant as compared to T12 after 90 days. The application of mycorrhiza and putrescine significantly increased BCF (>1) and decreased TF (<1) for Cd translocation. The administration of mycorrhiza and putrescine boosted the Cd removal efficiency of sorghum plants, according to FTIR, XRD, and DSC analysis. As a result, this study demonstrates novel approaches for induced phytoremediation activity of plants via mycorrhiza and putrescine augmentation, which can be a promising option for efficient bioremediation in contaminated sites., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Masson SAS. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
19. Recent advancement of nano-biochar for the remediation of heavy metals and emerging contaminants: Mechanism, adsorption kinetic model, plant growth and development.
- Author
-
Pathak HK, Seth CS, Chauhan PK, Dubey G, Singh G, Jain D, Upadhyay SK, Dwivedi P, and Khoo KS
- Subjects
- Adsorption, Kinetics, Environmental Restoration and Remediation methods, Metals, Heavy analysis, Charcoal chemistry, Soil Pollutants analysis, Soil Pollutants chemistry, Plant Development drug effects
- Abstract
Even though researches have shown that biochar can improve soil-health and plant-growth even in harsh environments and get rid of harmful heavy metals and new contaminants, it is still not sustainable, affordable, or effective enough. Therefore, scientists are required to develop nanomaterials in order to preserve numerous aquatic and terrestrial species. The carbonaceous chemical known as nano-biochar (N-BC) can be used to get rid of metal contamination and emerging contaminants. However, techniques to reduce hetero-aggregation and agglomeration of nano-biochar are needed that lead to the emergence of emerging nano-biochar (EN-BC) in order to maximise its capacity for adsorption of nano-biochar. To address concerns in regards to the expanding human population and sustain a healthy community, it is imperative to address the problems associated with toxic heavy metals, emerging contaminants, and other abiotic stressors that are threatening agricultural development. Nano-biochar can provide an effective solution for removal of emerging contaminants, toxic heavy metals, and non-degradable substance. This review provides the detailed functional mechanistic and kinetics of nano-biochar, its effectiveness in promoting plant growth, and soil health under abiotic stress. Nonetheless, this review paper has comprehensively illustrated various adsorption study models that will be employed in future research., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
20. Optimization and utilization of emerging waste (fly ash) for growth performance of chickpea (Cicer arietinum L.) plant and mitigation of root-knot nematode (Meloidogyne incognita) stress.
- Author
-
Haris M, Hussain T, Khan A, Upadhyay SK, and Khan AA
- Subjects
- Animals, Plant Roots parasitology, Soil chemistry, Soil parasitology, Plant Diseases parasitology, Plant Diseases prevention & control, Cicer, Tylenchoidea physiology, Coal Ash
- Abstract
The sustainable management of large amounts of fly ash (FA) is a concern for researchers, and we aim to determine the FA application in plant development and nematicidal activity in the current study. A pot study is therefore performed to assess the effects of adding different, FA-concentrations to soil (w/w) on the infection of chickpea plants with the root-knot nematode Meloidogyne incognita. Sequence characteristic amplified region (SCAR) and internal transcribed spacer (ITS) region-based-markers were used to molecularly confirm M. incognita. With better plant growth and chickpea yield performance, FA enhanced the nutritious components of the soil. When compared with untreated, uninoculated control (UUC) plants, the inoculation of M. incognita dramatically reduced chickpea plant growth, yield biomass, and metabolism. The findings showed that the potential of FA to lessen the root-knot nematode illness in respect of galls, egg-masses, and reproductive attributes may be used to explain the mitigating effect of FA. Fascinatingly, compared with the untreated, inoculated control (UIC) plants, the FA treatment, primarily at 20%, considerably (p ≤ 0.05) boosted plant growth, yield biomass, and pigment content. Additionally, when the amounts of FA rose, the activity of antioxidants like superoxide dismutase-SOD, catalase-CAT, and peroxidase-POX as well as osmo-protectants like proline gradually increased. Therefore, our findings imply that 20% FA can be successfully applied as a potential strategy to increase biomass yield and plant growth while simultaneously reducing M. incognita infection in chickpea plants., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
- Published
- 2024
- Full Text
- View/download PDF
21. Deciphering soil-plant-animal continuum in relation to trace elements in middle Gangetic plain region of India.
- Author
-
Upadhyay SK, Tewari D, Singh VK, Chaudhary SK, and Verma N
- Subjects
- Animals, India, Cattle, Plants chemistry, Trace Elements analysis, Trace Elements blood, Soil chemistry, Hair chemistry, Animal Feed analysis
- Abstract
The soil-plant-animal continuum represents an evolving realm in biological research that's why this study was undertaken in the middle Gangetic plain region of India. Trace and ultra-trace elements were analyzed in 100 soil samples, 147 feed and fodder samples, as well as 69 blood and 127 hair samples with the help of inductively coupled plasma optical emission spectroscopy (ICP-OES). The levels of trace and ultra-trace elements in the soil were significantly higher than those in the feed, and similarly, the concentrations in the feed were notably higher than those in the blood of dairy cattle. Blood and hair samples from the cattle showed deficiencies in copper (Cu) and manganese (Mn), with reaching approximately 20% and 50%, respectively. Correlation analysis indicated significant (P < 0.05) associations between the trace and ultra-trace elements in plants and the corresponding elements found in cattle's hair, specifically for iron (Fe) and molybdenum (Mo). Conversely, a significant (P < 0.05) negative correlation was observed between soil composition and cattle's blood, while a positive correlation was evident only in the case of silver content between plant and cattle's hair. Regression analyses revealed positive linear relationships between minerals in soils and plants, as well as between plants and cattle. However, the correlation coefficients were statistically insignificant. The regression equations established to predict mineral concentrations in cattle based on soil and plant mineral contents indicated a positive relationship for both trace and ultra-trace elements, suggesting the potential to measure the mineral status in dairy cattle through this approach., (© 2024. The Author(s), under exclusive licence to Springer Nature B.V.)
- Published
- 2024
- Full Text
- View/download PDF
22. Electrostatic interactions mediated defibrillation of β-lactoglobulin fibrils using Keggin Polyoxometalates.
- Author
-
Zende R, Bharati AJ, Mannem MR, Bhatt P, Garai S, Upadhyay SK, and Sankaranarayanan K
- Subjects
- Tungsten Compounds chemistry, Amyloid chemistry, Spectrometry, Fluorescence, Polyelectrolytes, Anions, Lactoglobulins chemistry, Static Electricity, Molecular Docking Simulation, Molybdenum chemistry
- Abstract
The whey protein β-lactoglobulin (βLG) forms fibrils similar to the amyloid fibrils in the neurodegenerative diseases due to its higher predisposition of β-sheets. This study shed light on the understanding different inorganic Keggin polyoxometalates (POMs) interaction with the protein βLG fibrils. POMs such as Phosphomolybdic acid (PMA), silicomolybdic acid (SMA), tungstosilicic acid (TSA), and phosphotungstic acid (PTA) were used due to their inherent higher anionic charges. The interaction studies were monitored with fluorescence spectra and Thioflavin T assay for both the βLG monomers and the fibrils initially to elucidate the binding ability of the POMs. The binding of POMs and βLG is also demonstrated by molecular docking studies. Zeta potential studies showed the electrostatic mediated higher interactions of the POMs with the protein fibrils. Isothermal titration calorimetry (ITC) studies showed that the molybdenum containing POMs have higher affinity to the protein fibrils than the tungsten. This study could help understanding formation of food grade protein fibrils which have profound importance in food industries., Competing Interests: Declaration of Competing Interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Kamatchi Sankaranarayanan reports financial support was provided by Science and Engineering Research Board (SERB) Govt. of India. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
23. DPY1 as an osmosensor for drought signaling.
- Author
-
Shekhawat J and Upadhyay SK
- Subjects
- Gene Expression Regulation, Plant, Stress, Physiological, Arabidopsis Proteins metabolism, Arabidopsis Proteins genetics, Plant Proteins metabolism, Plant Proteins genetics, Arabidopsis genetics, Arabidopsis physiology, Arabidopsis metabolism, Droughts, Signal Transduction
- Abstract
Drought stress has been extensively studied for its effect on the downstream signaling cascade and stress-responsive gene expression, but understanding the process has remained elusive. Recently, Zhao et al. identified DROOPY LEAF1 (DPY1) as an osmosensor and revealed a novel mechanism of DPY1-STRESS ACTIVATED PROTEIN KINASE6 (SAPK6)-mediated drought stress signaling in higher plants., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2023 Elsevier Ltd. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
24. Mechanistic and future prospects in rhizospheric engineering for agricultural contaminants removal, soil health restoration, and management of climate change stress.
- Author
-
Pathak HK, Chauhan PK, Seth CS, Dubey G, and Upadhyay SK
- Subjects
- Charcoal, Biodegradation, Environmental, Environmental Restoration and Remediation methods, Metals, Heavy analysis, Climate Change, Soil Pollutants analysis, Rhizosphere, Agriculture methods, Soil chemistry, Soil Microbiology
- Abstract
Climate change, food insecurity, and agricultural pollution are all serious challenges in the twenty-first century, impacting plant growth, soil quality, and food security. Innovative techniques are required to mitigate these negative outcomes. Toxic heavy metals (THMs), organic pollutants (OPs), and emerging contaminants (ECs), as well as other biotic and abiotic stressors, can all affect nutrient availability, plant metabolic pathways, agricultural productivity, and soil-fertility. Comprehending the interactions between root exudates, microorganisms, and modified biochar can aid in the fight against environmental problems such as the accumulation of pollutants and the stressful effects of climate change. Microbes can inhibit THMs uptake, degrade organic pollutants, releases biomolecules that regulate crop development under drought, salinity, pathogenic attack and other stresses. However, these microbial abilities are primarily demonstrated in research facilities rather than in contaminated or stressed habitats. Despite not being a perfect solution, biochar can remove THMs, OPs, and ECs from contaminated areas and reduce the impact of climate change on plants. We hypothesized that combining microorganisms with biochar to address the problems of contaminated soil and climate change stress would be effective in the field. Despite the fact that root exudates have the potential to attract selected microorganisms and biochar, there has been little attention paid to these areas, considering that this work addresses a critical knowledge gap of rhizospheric engineering mediated root exudates to foster microbial and biochar adaptation. Reducing the detrimental impacts of THMs, OPs, ECs, as well as abiotic and biotic stress, requires identifying the best root-associated microbes and biochar adaptation mechanisms., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Sudhir K Upadhyay reports was provided by Veer Bahadur Singh Purvanchal University. Sudhir K. Upadhyay reports a relationship with Veer Bahadur Singh Purvanchal University that includes: employment. Sudhir K Upadhyay has patent NA pending to NA. All authors (Himanshu K. Pathak, Prabhat K. Chauhan, Chandra Shekhar Seth, Gopal Dubey, Sudhir K. Upadhyay) have no conflict of interest that appeared in this work. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
25. Impact of Bacillus cereus SPB-10 on Growth Promotion of Wheat (Triticum aestivum L.) Under Arsenic-Contaminated Soil.
- Author
-
Chauhan PK, Pathak HK, Dubey G, Sharma H, and Upadhyay SK
- Subjects
- RNA, Ribosomal, 16S genetics, Plant Roots microbiology, Plant Roots growth & development, Biodegradation, Environmental, Siderophores metabolism, Triticum growth & development, Triticum microbiology, Triticum metabolism, Bacillus cereus metabolism, Bacillus cereus growth & development, Bacillus cereus genetics, Bacillus cereus drug effects, Arsenic metabolism, Soil Microbiology, Soil Pollutants metabolism
- Abstract
This study investigates the impact of bacteria on arsenic reduction in wheat plants, highlighting the potential of microbe-based eco-friendly strategies for plant growth. In the present study, bacterial isolate SPB-10 was survived at high concentration against both form of arsenic (As
3+ and As5+ ). SPB-10 produced 5.2 g/L and 11.3 g/L of exo-polysaccharide at 20 ppm of As3+ and As5+ , respectively, whereas qualitative examination revealed the highest siderophores ability. Other PGP attributes such as IAA production were recorded 52.12 mg/L and 95.82 mg/L, phosphate solubilization was 90.23 mg/L and 129 mg/L at 20 ppm of As3+ and As5+ , respectively. Significant amount of CAT, APX, and Proline was also observed at 20 ppm of As3+ and As5+ in SPB-10. Isolate SPB-10 was molecularly identified as Bacillus cereus through 16S rRNA sequencing. After 42 days, wheat plants inoculated with SPB-10 had a 25% increase in shoot length and dry weight, and 26% rise in chlorophyll-a pigment under As5+ supplemented T4 treatment than control. Reducing sugar content was increased by 24% in T6-treated plants compared to control. Additionally, SPB-10 enhanced the content of essential nutrients (NPK), CAT, and APX in plant's-leaf under both As3+ and As5+ stressed conditions after 42 days. The study found that arsenic uptake in plant roots and shoots decreased in SPB-10-inoculated plants, with the maximum reduction observed in As5+ treated plants. Bio-concentration factor-BCF was reduced by 90.89% in SPB-10-inoculated treatment T4 after 42 days. This suggests that Bacillus cereus-SPB-10 may be beneficial for plant growth in arsenic-contaminated soil., (© 2024. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)- Published
- 2024
- Full Text
- View/download PDF
26. Nitrogen fixation and phytohormone stimulation of sugarcane plant through plant growth promoting diazotrophic Pseudomonas .
- Author
-
Singh P, Singh RK, Li HB, Guo DJ, Sharma A, Verma KK, Solanki MK, Upadhyay SK, Lakshmanan P, Yang LT, and Li YR
- Subjects
- Nitrogen metabolism, Plant Development, Saccharum growth & development, Saccharum metabolism, Saccharum microbiology, Nitrogen Fixation, Pseudomonas metabolism, Pseudomonas growth & development, Plant Growth Regulators metabolism
- Abstract
Diazotrophic microorganisms are free-living groups of organisms that can convert atmospheric nitrogen (N) into bioavailable nitrogen for plants, which increases crop development and production. The purpose of the current study was to ascertain how diazotrophic plant growth promoting (PGP) Pseudomonas strains (P. koreensis CY4 and P. entomophila CN11) enhanced nitrogen fixation, defense activity, and PGP attributes of sugarcane varieties; GT11 and G×B9. A 15N isotope-dilution study was conducted to confirm the sugarcane strains' capacity to fix nitrogen, and the results indicated that between 21 to 35% of plant, nitrogen is fixed biologically by selected rhizobacteria. In comparison to the control, after 30, 60, and 90 days, both CY4 and CN11 strains significantly increased defense-related enzymes (catalase, peroxidase, phenylalanine ammonia-lyase, superoxide dismutase, glucanase, and chitinase) and phytohormones (abscisic acid, ABA, cytokinin, etc.) in GT11 and GXB. Additionally, the expression of SuCHI, SuGLU, SuCAT, SuSOD, and SuPAL genes was found to be elevated in Pseudomonas strains inoculated plants using real-time quantitative polymerase chain reaction (RT-qPCR). Both bacterial strains increased all physiological parameters and chlorophyll content in sugarcane plants more than their control. The effects of P. koreensis CY4 and P. entomophila CN11 strains on sugarcane growth promotion and nitrogen fixation under greenhouse conditions are described here for the first time systematically. The results of confirmation studies demonstrated that P. koreensis CY4 and P. entomophila are PGP bacterial strains with the potential to be employed as a biofertilizer for sugarcane growth, nitrogen nutrient absorption, and reduced application of chemical nitrogenous fertilizers in agricultural fields. .
- Published
- 2024
- Full Text
- View/download PDF
27. Investigation of two-pore K + (TPK) channels in Triticum aestivum L. suggests their role in stress response.
- Author
-
Kaur A, Madhu, Sharma A, Singh K, and Upadhyay SK
- Abstract
Two-pore K
+ (TPK) channels are voltage-independent and involved in stress response in plants. Herein, we identified 12 TaTPK genes located on nine chromosomes in the Triticum aestivum genome. The majority of TaTPK genes comprised two exons. Each TaTPK channel comprised four transmembrane (TM) helices, N- and C-terminal ion-channel domains, two EF-hand domains and one 14-3-3 binding site. Additionally, highly conserved 'GYGD' motif responsible for K+ ion specificity, was found in between the TMs in both the ion-channel domains. Nine TaTPK channels were predicted to be localised at the plasma membrane, while three were vacuolar. The protein-protein and protein-chemical interactions indicated the coordinated functioning of the TaTPK channels with the other K+ transporters and their possible interaction with the Ca2+ -signaling pathway. Expression studies suggested their importance in both vegetative and reproductive tissues development. Significantly modulated expression of various TaTPK genes during heat, drought, combined heat and drought and salt stresses, and after fungal infestation, depicted their function in stress responses. The miRNAs and transcription factors interaction analyses suggested their role in the hormone, light, growth and development-related, and stress-responsive signaling cascades. The current study suggested vital functions of various TaTPK genes, especially in stress response, and would provide an opportunity for their detailed characterization in future studies., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2024 The Author(s).)- Published
- 2024
- Full Text
- View/download PDF
28. Review on interactions between nanomaterials and phytohormones: Novel perspectives and opportunities for mitigating environmental challenges.
- Author
-
Kumar D, Singh R, Upadhyay SK, Verma KK, Tripathi RM, Liu H, Dhankher OP, Tripathi RD, Sahi SV, and Seth CS
- Subjects
- Plants metabolism, Stress, Physiological, Temperature, Plant Growth Regulators metabolism, Nanostructures
- Abstract
Nanotechnology offers the potential to provide innovative solutions for sustainable crop production as plants are exposed to a combination of climate change factors (CO
2 , temperature, UV radiation, ozone), abiotic (heavy metals, salinity, drought), and biotic (virus, bacteria, fungi, nematode, and insects) stresses. The application of particular sizes, shapes, and concentration of nanomaterials (NMs) potentially mitigate the negative impacts in plants by modulation of photosynthetic rate, redox homeostasis, hormonal balance, and nutrient assimilation through upregulation of anti-stress metabolites, antioxidant defense pathways, and genes and genes network. The present review inculcates recent advances in uptake, translocation, and accumulation mechanisms of NMs in plants. The critical theme of this review provides detailed insights into different physiological, biochemical, molecular, and stress tolerance mechanism(s) of NMs action and their cross-talk with different phytohormones. The role of NMs as a double-edged sword for climate change factors, abiotic, and biotic stresses for nutrients uptake, hormones synthesis, cytotoxic, and genotoxic effects including chromosomal aberration, and micronuclei synthesis have been extensively studied. Importantly, this review aims to provide an in-depth understanding of the hormesis effect at low and toxicity at higher doses of NMs under different stressors to develop innovative approaches and design smart NMs for sustainable crop production., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. Competing interests The authors have no relevant financial or non-financial interests to disclose., (Copyright © 2024 Elsevier B.V. All rights reserved.)- Published
- 2024
- Full Text
- View/download PDF
29. Mixed Consortium of Salt-Tolerant Phosphate Solubilizing Bacteria Improves Maize (Zea mays) Plant Growth and Soil Health Under Saline Conditions.
- Author
-
Chauhan PK and Upadhyay SK
- Subjects
- Soil, Sodium Chloride pharmacology, Bacteria genetics, Proline, Plant Roots, Soil Microbiology, Phosphates, Zea mays
- Abstract
The rhizobacterial isolate SP-167 exhibited considerable phosphate solubilization, IAA production, exo-polysaccharides, proline, APX, and CAT at a concentration of 6% NaCl (w/v). 16S rDNA sequencing and BLAST analysis showed that isolate SP-167 was Klebsiella sp. In this study, T2 and T8 consortium was developed on the basis of the compatibility of isolate SP-167 with Kluyvera sp. and Enterobacter sp. At 6% NaCl (w/v) concentration, T2 and T8 showed increased PGP properties such as phosphate solubilization, IAA, Proline activity, CAT, POD, and EPS than isolate SP-167. The maximum increase in shoot length was recorded in T2-treated maize plants as compared to the control after 60 days in 1% NaCl stress. The N, P, and K content of leaves were significantly increased in maize plants with the inoculation of both the T2 and T8 consortium. The electrical conductivity of soil was decreased significantly in the T2 inoculated 1% NaCl (w/v) treated pot after 30, 60, and 90 days. In this study, soil enzymes DHA and PPO were significantly increased in both T2 and T8 treated combinations. The Na concentration in root and shoot were significantly decreased in T8 inoculated plant than in T2, as confirmed by the translocation factor study., (© 2023. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2024
- Full Text
- View/download PDF
30. Nanotechnology, a frontier in agricultural science, a novel approach in abiotic stress management and convergence with new age medicine-A review.
- Author
-
Mariyam S, Upadhyay SK, Chakraborty K, Verma KK, Duhan JS, Muneer S, Meena M, Sharma RK, Ghodake G, and Seth CS
- Subjects
- Nanotechnology methods, Crops, Agricultural, Stress, Physiological, Agriculture methods, Nanostructures
- Abstract
Climate change imposes various environmental stresses which substantially impact plant growth and productivity. Salinity, drought, temperature extremes, heavy metals, and nutritional imbalances are among several abiotic stresses contributing to high yield losses of crops in various parts of the world, resulting in food insecurity. Many interesting strategies are being researched in the attempt to improve plants' environmental stress tolerance. These include the application of nanoparticles, which have been found to improve plant function under stress situations. Nanotechnology will be a key driver in the upcoming agri-tech and pharmaceutical revolution, which promises a more sustainable, efficient, and resilient agricultural and medical system Nano-fertilizers can help plants utilise nutrients more efficiently by releasing nutrients slowly and sustainably. Plant physiology and nanomaterial features (such as size, shape, and charge) are important aspects influencing the impact on plant growth. Here, we discussed the most promising new opportunities and methodologies for using nanotechnology to increase the efficiency of critical inputs for crop agriculture, as well as to better manage biotic and abiotic stress. Potential development and implementation challenges are highlighted, emphasising the importance of designing suggested nanotechnologies using a systems approach. Finally, the strengths, flaws, possibilities, and risks of nanotechnology are assessed and analysed in order to present a comprehensive and clear picture of the nanotechnology potentials, as well as future paths for nano-based agri-food applications towards sustainability. Future research directions have been established in order to support research towards the long-term development of nano-enabled agriculture and evolution of pharmaceutical industry., Competing Interests: Declaration of competing interest All authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
31. Current paradigms in employing self-assembled structures: Drug delivery implications with improved therapeutic potential.
- Author
-
Sharma A, Singh M, Sharma V, Vashishth A, Raj M, Upadhyay SK, Singh S, Ramniwas S, Dhama K, Sharma AK, and Bhatia SK
- Subjects
- Humans, Polyethylene Glycols chemistry, Drug Carriers chemistry, Polymers chemistry, Micelles, Drug Delivery Systems
- Abstract
Recent efforts have focused on developing improved drug delivery systems with enhanced therapeutic efficacy and minimal side effects. Micelles, self-assembled from amphiphilic block copolymers in aqueous solutions, have gained considerable attention for drug delivery. However, there is a need to further enhance their efficiency. These micelles offer benefits like biodegradability, biocompatibility, sustained drug release, and improved patient compliance. Yet, researchers must address stability issues and reduce toxicity. Nanoscale self-assembled structures have shown promise as efficient drug carriers, offering an alternative to conventional methods. Fine-tuning at the monomeric and molecular levels, along with structural modifications, is crucial for optimal drug release profiles. Various strategies, such as entrapping hydrophobic drugs and using polyethylene oxide diblock copolymer micelles to resist protein adsorption and cellular adhesion, protect the hydrophobic core from degradation. The polyethylene oxide corona also provides stealth properties, prolonging blood circulation for extended drug administration. Amphiphilic copolymers are attractive for drug delivery due to their adjustable properties, allowing control over micelle size and morphology. Emerging tools promise complex and multifunctional platforms. This article summarizes about the challenges as far as the use of micelles is concerned, including optimizing performance, rigorous pre-clinical and clinical research, and suggests further improvement for drug delivery efficacy., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
32. To be remembered: B cell memory response against SARS-CoV-2 and its variants in vaccinated and unvaccinated individuals.
- Author
-
Ahmed N, Athavale A, Tripathi AH, Subramaniam A, Upadhyay SK, Pandey AK, Rai RC, and Awasthi A
- Subjects
- Humans, COVID-19 Vaccines, Antibodies, Immunologic Memory, SARS-CoV-2, COVID-19 prevention & control
- Abstract
COVID-19 disease has plagued the world economy and affected the overall well-being and life of most of the people. Natural infection as well as vaccination leads to the development of an immune response against the pathogen. This involves the production of antibodies, which can neutralize the virus during future challenges. In addition, the development of cellular immune memory with memory B and T cells provides long-lasting protection. The longevity of the immune response has been a subject of intensive research in this field. The extent of immunity conferred by different forms of vaccination or natural infections remained debatable for long. Hence, understanding the effectiveness of these responses among different groups of people can assist government organizations in making informed policy decisions. In this article, based on the publicly available data, we have reviewed the memory response generated by some of the vaccines against SARS-CoV-2 and its variants, particularly B cell memory in different groups of individuals., (© 2023 The Scandinavian Foundation for Immunology.)
- Published
- 2024
- Full Text
- View/download PDF
33. Fostering plant growth performance under drought stress using rhizospheric microbes, their gene editing, and biochar.
- Author
-
Chauhan PK, Upadhyay SK, Rajput VD, Dwivedi P, Minkina T, and Wong MH
- Subjects
- Agriculture, Crops, Agricultural, Gene Editing, Droughts, Charcoal
- Abstract
Stress due to drought lowers crop yield and frequently leads to a rise in food scarcity. Plants' intricate metabolic systems enable them to tolerate drought stress, but they are unable to handle it well. Adding some external, environmentally friendly supplements can boost plant growth and productivity when it comes to drought-stressed plants. In order to prevent the detrimental effects of drought in agricultural regions, environmentally friendly practices must be upheld. Plant growth-promoting rhizobacteria (PGPR) can exhibit beneficial phytostimulation, mineralization, and biocontrol activities under drought stress. The significant impact of the PGPR previously reported has not been accepted as an effective treatment to lessen drought stress. Recent studies have successfully shown that manipulating microbes can be a better option to reduce the severity of drought in plants. In this review, we demonstrate how modifying agents such as biochar, PGPR consortia, PGPR, and mycorrhizal fungi can help overcome drought stress responses in crop plants. This article also discusses CRISPR/Cas9-modifiable genes, increase plant's effectiveness in drought conditions, and increase plant resistance to drought stress. With an eco-friendly approach in mind, there is a need for practical management techniques having potential prospects based on an integrated strategy mediated by CRISPR-Cas9 editing, PGPR, which may alleviate the effects of drought stress in crops and aid in achieving the United Nation Sustainable Development Goals (UN-SDGs-2030)., (© 2023. The Author(s), under exclusive licence to Springer Nature B.V.)
- Published
- 2024
- Full Text
- View/download PDF
34. 'Synthesis, antiviral activity, molecular docking, and molecular dynamics studies of ethoxy phthalimide pyrazole derivatives against Cytomegalovirus and Varicella-Zoster virus: potential consequences and strategies for developing new antiviral treatments'.
- Author
-
Verma AK, Yadav V, Bhojiya AA, Upadhyay SK, Singh N, Pareek SS, Ashid M, Ahmed SF, and Hossain MS
- Subjects
- Humans, Binding Sites, Protein Binding, Structure-Activity Relationship, Microbial Sensitivity Tests, Virus Replication drug effects, Hydrogen Bonding, Antiviral Agents pharmacology, Antiviral Agents chemistry, Antiviral Agents chemical synthesis, Molecular Docking Simulation, Herpesvirus 3, Human drug effects, Molecular Dynamics Simulation, Cytomegalovirus drug effects, Pyrazoles pharmacology, Pyrazoles chemistry, Pyrazoles chemical synthesis, Phthalimides chemistry, Phthalimides pharmacology, Phthalimides chemical synthesis
- Abstract
Substituted ethoxy phthalimide pyrazole derivatives ( 6a-e ) have been produced using a one-pot synthesis technique. Spectral analysis was used to establish the molecular structure of the synthesized compounds, and they were examined in silico and in vitro for their ability to bind to and inhibit replication of the AD-169 strain, the Davis strain of CMV, the OKA strain and the 07/1 strain of Varicella-Zoster virus (VZV). Molecular Docking was used to estimate the binding mechanism and energy of compounds 4, 6a-e to their respective target proteins, thymidine kinase (TK), Varicella-Zoster protease (VZP) of VZV and tegument protein pp71 (TPpp71) of Cytomegalovirus (CMV). The MIC50 and EC50 were utilized to evaluate the antiviral and cytotoxic activities of test compounds in human embryonic lung (HEL) cells against the two reference medicines, Ganciclovir and Acyclovir. The chemicals studied showed a high affinity for binding sites and near binding sites of target proteins by generating H-bonds, carbon-hydrogen bonds, π-anion, π-sulfur, π-sigma, alkyl and π-alkyl interactions. All of the test compounds ( 6a-e ) had higher binding energy than the standard medications. The ADME/T data suggests that these potential inhibitors are less toxic. Drug-protein complexes are structurally compact and demonstrate minimal conformational change in molecular dynamics (MDs) simulations, indicating stability and stiffness. MM-PBSA and post-simulation analysis can predict lead compound active cavity binding stability. By inhibiting multitargeted proteins, these synthetic compounds may improve antiviral therapy. Our research suggests that these unique synthesized chemicals may be useful and accessible adjuvant antiviral therapy for Varicella Zoster and CMV. HighlightsTwo components synthesis of substituted ethoxy phthalimide pyrazole derivatives ( 6a-e ).Tested compounds ( 6a-e ) have antiviral and cytotoxicity activity against CMV and Varicella-Zoster virus (VZV) in HEL cells.Compounds bind to TK, Varicella-Zoster protease (VZP) of VZV, and modeled TPpp71 of Cytomegalovirus (CMV).In comparison to reference drugs, compounds have strong binding free energy and interactions with VZV and CMV protein complexes.The RMSD, RMSF, Rg, residual correlative motion (RCM), No. of hydrogen bonds, protein secondary structure content, per-residue protein secondary structure and MM/PBSA energy calculated for the selected compound with thymidine kinase (TK), VZP of VZV, and modeled tegument protein pp71 (TPpp71) of CMV through MD simulation studies for 50 ns.In comparison to the two reference drugs, ligands/compounds were found to meet the Lipinski rule of five and to have strong biological activity.Communicated by Ramaswamy H. Sarma.
- Published
- 2024
- Full Text
- View/download PDF
35. Modulation in gene expression and enzyme activity suggested the roles of monodehydroascorbate reductase in development and stress response in bread wheat.
- Author
-
Madhu, Sharma A, Kaur A, Singh K, and Upadhyay SK
- Subjects
- Bread, Phylogeny, Oxidoreductases genetics, Glutathione metabolism, Gene Expression, Indoleacetic Acids metabolism, Gene Expression Regulation, Plant, Antioxidants metabolism, Triticum metabolism
- Abstract
Monodehydroascorbate reductase (MDHAR) is a crucial enzymatic antioxidant of the ascorbate-glutathione pathway involved in reactive oxygen species scavenging. Herein, we identified 15 TaMDHAR genes in bread wheat. Phylogenetic analysis revealed their clustering into three groups, which are also related to the subcellular localization in the peroxisome matrix, peroxisome membrane, and chloroplast. Each TaMDHAR protein consisted of two conserved domains; Pyr_redox and Pyr_redox_2 of the pyridine nucleotide disulfide oxidoreductase family. The occurrence of diverse groups of cis-regulatory elements in the promoter region and their interaction with numerous transcription factors suggest assorted functions of TaMDHARs in growth and development and in light, phytohormones, and stress responses. Expression analysis in various tissues further revealed their importance in vegetative and reproductive development. In addition, the differential gene expression and enhanced enzyme activity during drought, heat, and salt treatments exposed their role in abiotic stress response. Interaction of MDHARs with various antioxidant enzymes and biochemicals related to the ascorbate-glutathione cycle exposed their synchronized functioning. Interaction with auxin indicated the probability of cross-talk between antioxidants and auxin signaling. The miR168a, miR169, miR172 and others interaction with various TaMDHARs further directed their association with developmental processes and stress responses. The current study provides extensive information about the importance of TaMDHARs, moreover, the precise role of each gene needs to be established in future studies., Competing Interests: Declaration of Competing Interest The authors declare that they have no conflict of interest., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
36. An in vitro model of adipose tissue-associated macrophages.
- Author
-
Bhatia K, Tiwari S, Gupta VK, Sapariya NM, and Upadhyay SK
- Subjects
- Humans, Macrophage Activation, Animals, Endoplasmic Reticulum Stress, Mice, Macrophages metabolism, Adipose Tissue metabolism, Obesity metabolism, Obesity pathology, Insulin Resistance, Inflammation pathology, Inflammation metabolism
- Abstract
Obesity-related chronic low-grade inflammation plays a central role in the development of insulin resistance. Macrophages are key players in adipose tissue homeostasis, and their phenotypic shift from the anti-inflammatory or alternatively activated (M2) form to the pro-inflammatory, classically activated (M1) form is a hallmark of insulin resistance. However, adipose tissue macrophages (ATMs) have been identified as a distinct subpopulation of macrophages in several recent studies. These ATMs, described as metabolically activated macrophages (MMe), differ from M1 and are primarily found in the adipose tissue of obese individuals. In our study, we developed an in vitro model of MMe macrophages to establish a simple and reproducible system to understand their characteristics and role in the pathophysiology of insulin resistance. We examined their characteristics such as inflammatory patterns, surface markers, and metabolic features, and compared them with M1 and M2 macrophages. We found that a cell line-based in vitro model effectively mirrors the characteristics of ATMs, highlighting distinct inflammatory phenotypes, metabolism, surface markers, altered lysosomal activity, and ER stress akin to macrophages in vivo . This model captures the subtle distinctions between MMe and M1, and can be effectively used to study several features of macrophage-adipose interactions of therapeutic importance.
- Published
- 2024
37. Phytochemical Screening of Nyctanthes arbor-tristis Plant Extracts and Their Antioxidant and Antibacterial Activity Analysis.
- Author
-
Gahtori R, Tripathi AH, Chand G, Pande A, Joshi P, Rai RC, and Upadhyay SK
- Subjects
- Antioxidants pharmacology, Antioxidants chemistry, Phylogeny, Anti-Bacterial Agents pharmacology, Kanamycin, Phytochemicals pharmacology, Plant Leaves, Plant Extracts pharmacology, Plant Extracts chemistry, Oleaceae chemistry
- Abstract
Nyctanthes arbor-tristis, alias "Vishnu Parijat," is a medicinal plant used to treat various inflammation-associated ailments and to combat innumerable infections in the traditional system of medicine. In the present study, we collected the samples of N. arbor-tristis from the lower Himalayan region of Uttarakhand, India, and carried out their molecular identification through DNA barcoding. To examine the antioxidant and antibacterial activities, we prepared the ethanolic and aqueous extracts (from flowers and leaves) and performed their phytochemical analysis by using different qualitative and quantitative approaches. The phytoextracts showed marked antioxidant potential, as revealed by a comprehensive set of assays. The ethanolic leaf extract showed marked antioxidant potential towards DPPH, ABTS, and NO scavenging (IC
50 = 30.75 ± 0.006, 30.83 ± 0.002, and 51.23 ± 0.009 μg/mL, respectively). We used TLC-bioautography assay to characterize different antioxidant constituents (based on their Rf values) in the chromatograms ran under different mobile phases. For one of the prominent antioxidant spots in TLC bioautography, GC-MS analysis identified cis-9-hexadecenal and n-hexadecanoic acid as the major constituents. Furthermore, in antibacterial study, the ethanolic leaf extract showed marked activity against Aeromonas salmonicida (113.40 mg/mL of extract was equivalent to 100 μg/mL of kanamycin). In contrast, the ethanolic flower extract showed considerable antibacterial activity against Pseudomonas aeruginosa (125.85 mg/mL of extract ≡100 μg/mL of kanamycin). This study presents the phylogenetic account and unravels the antioxidant-related properties and antibacterial potential of N. arbor-tristis., (© 2023. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)- Published
- 2024
- Full Text
- View/download PDF
38. CPK12 and Ca 2+ -mediated hypoxia signaling.
- Author
-
Upadhyay SK
- Subjects
- Cell Hypoxia, Phosphorylation, Calcium metabolism, Reactive Oxygen Species metabolism, Protein Kinases metabolism, Hypoxia metabolism
- Abstract
Hypoxia triggers reactive oxygen species (ROS)-induced elevation in cytoplasmic calcium (Ca
2+ ) in the plant cells. Calcium-dependent protein kinase 12 (CPK12) acts as a sensor to recognize the Ca2+ signature and is activated by autophosphorylation. Then, the CPK12 moves into the nucleus with the help of phosphatidic acid (PA) and phosphorylates ERF-VII family proteins that activate hypoxia signaling and response. The study provides a novel mechanism of hypoxia signaling in plants. Moreover, the mechanism of hypoxia-specific Ca2+ signature generation remains elusive.- Published
- 2023
- Full Text
- View/download PDF
39. Melting the wall: plant parasitism entails pectin modification.
- Author
-
Dixit S and Upadhyay SK
- Subjects
- Pectins, Cell Wall, Arabidopsis genetics, Orobanchaceae, Oryza
- Abstract
Phtheirospermum japonicum shows induced expression of PjPME and PjPMEI genes during haustoria development in rice and Arabidopsis with increased PME activity, which leads to the modulated cell wall during parasitism. Moreover, how PME and PMEI proteins interact and balance during haustoria development remains elusive.
- Published
- 2023
- Full Text
- View/download PDF
40. Plant growth-promoting rhizobacteria: a potential bio-asset for restoration of degraded soil and crop productivity with sustainable emerging techniques.
- Author
-
Upadhyay SK, Rajput VD, Kumari A, Espinosa-Saiz D, Menendez E, Minkina T, Dwivedi P, and Mandzhieva S
- Subjects
- Soil Microbiology, Plant Development, Crops, Agricultural, Soil, Metals, Heavy
- Abstract
The rapid expansion of degraded soil puts pressure on agricultural crop yield while also increasing the likelihood of food scarcity in the near future at the global level. The degraded soil does not suit plants growth owing to the alteration in biogeochemical cycles of nutrients, soil microbial diversity, soil organic matter, and increasing concentration of heavy metals and organic chemicals. Therefore, it is imperative that a solution should be found for such emerging issues in order to establish a sustainable future. In this context, the importance of plant growth-promoting rhizobacteria (PGPR) for their ability to reduce plant stress has been recognized. A direct and indirect mechanism in plant growth promotion is facilitated by PGPR via phytostimulation, biofertilizers, and biocontrol activities. However, plant stress mediated by deteriorated soil at the field level is not entirely addressed by the implementation of PGPR at the field level. Thus, emerging methods such as CRISPR and nanotechnological approaches along with PGPR could manage degraded soil effectively. In the pursuit of the critical gaps in this respect, the present review discusses the recent advancement in PGPR action when used along with nanomaterials and CRISPR, impacting plant growth under degraded soil, thereby opening a new horizon for researchers in this field to mitigate the challenges of degraded soil., (© 2022. The Author(s), under exclusive licence to Springer Nature B.V.)
- Published
- 2023
- Full Text
- View/download PDF
41. TaGPX1-D overexpression provides salinity and osmotic stress tolerance in Arabidopsis.
- Author
-
Tyagi S, Shumayla, Sharma Y, Madhu, Sharma A, Pandey A, Singh K, and Upadhyay SK
- Subjects
- Plant Proteins genetics, Plant Proteins metabolism, Salt Tolerance genetics, Glutathione Peroxidase metabolism, Glutathione Peroxidase genetics, Gene Expression Regulation, Plant, Hydrogen Peroxide metabolism, Stress, Physiological genetics, Arabidopsis genetics, Arabidopsis physiology, Arabidopsis metabolism, Plants, Genetically Modified genetics, Osmotic Pressure, Triticum genetics, Triticum physiology, Triticum metabolism, Salinity
- Abstract
Glutathione peroxidases (GPXs) are known to play an essential role in guarding cells against oxidative stress by catalyzing the reduction of hydrogen peroxide and organic hydroperoxides. The current study aims functional characterization of the TaGPX1-D gene of bread wheat (Triticum aestivum) for salinity and osmotic stress tolerance. To achieve this, we initially performed the spot assays of TaGPX1-D expressing yeast cells. The growth of recombinant TaGPX1-D expressing yeast cells was notably higher than the control cells under stress conditions. Later, we generated transgenic Arabidopsis plants expressing the TaGPX1-D gene and investigated their tolerance to various stress conditions. The transgenic plants exhibited improved tolerance to both salinity and osmotic stresses compared to the wild-type plants. The higher germination rates, increased antioxidant enzymes activities, improved chlorophyll, carotenoid, proline and relative water contents, and reduced hydrogen peroxide and MDA levels in the transgenic lines supported the stress tolerance mechanism. Overall, this study demonstrated the role of TaGPX1-D in abiotic stress tolerance, and it can be used for improving the tolerance of crops to environmental stressors, such as salinity and osmotic stress in future research., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2023
- Full Text
- View/download PDF
42. Exploring Microbial Contributions to Nutraceutical Production: From Natural to Designed Foods.
- Author
-
Thakur B, Kaur S, Rani N, Kaur R, Upadhyay SK, and Tripathi M
- Abstract
For ages, societies throughout the world have used fermentation as a traditional method for food processing and preservation, helping to create a wide range of staple foods and delicacies. Due to its possible health advantages, mostly attributable to the inclusion of bioactive substances known as nutraceuticals, fermented foods have attracted a lot of interest recently. This in-depth analysis examines the wide range of nutraceuticals present in fermented foods, as well as how they are made, what health benefits they may have, and how they may be used in the nutraceutical and functional food businesses. By stressing how important fermented foods are as a source of beneficial bioactive components that support human health and well-being. Numerous bioactive substances found in fermented foods have been the subject of recent scientific studies. These molecules may find use in the pharmaceutical and nutraceutical sectors. Streptococcus thermophilus, Lactobacillus gasseri, Lactobacillus delbrueckii, Lactobacillus bulgaricus, and Lactobacillus johnsonii are just a few examples of the probiotic bacteria that live in fermented foods and formulas. This review elucidates the importance of microorganisms sourced from fermented foods as potent agents for diverse nutraceuticals and their potential role in preventing various diseases whilst serving as functional food supplements., (© 2023. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2023
- Full Text
- View/download PDF
43. Understanding the salinity stress on plant and developing sustainable management strategies mediated salt-tolerant plant growth-promoting rhizobacteria and CRISPR/Cas9.
- Author
-
Chauhan PK, Upadhyay SK, Tripathi M, Singh R, Krishna D, Singh SK, and Dwivedi P
- Subjects
- Salt Tolerance, Salinity, Plant Development, Antioxidants metabolism, Crops, Agricultural growth & development, Crops, Agricultural metabolism, CRISPR-Cas Systems, Salt-Tolerant Plants metabolism, Salt-Tolerant Plants growth & development, Salt Stress
- Abstract
Soil salinity is a worldwide concern that decreases plant growth performance in agricultural fields and contributes to food scarcity. Salt stressors have adverse impacts on the plant's ionic, osmotic, and oxidative balance, as well as numerous physiological functions. Plants have a variety of coping strategies to deal with salt stress, including osmosensing, osmoregulation, ion-homeostasis, increased antioxidant synthesis, and so on. Not only does salt stress cause oxidative stress but also many types of stress do as well, thus plants have an effective antioxidant system to battle the negative effects of excessive reactive oxygen species produced as a result of stress. Rising salinity in the agricultural field affects crop productivity and plant development considerably; nevertheless, plants have a well-known copying mechanism that shields them from salt stress by facilitated production of secondary metabolites, antioxidants, ionhomeostasis, ABAbiosynthesis, and so on. To address this problem, various environment-friendly solutions such as salt-tolerant plant growth-promoting rhizobacteria, eco-friendly additives, and foliar applications of osmoprotectants/antioxidants are urgently needed. CRISPR/Cas9, a new genetic scissor, has recently been discovered to be an efficient approach for reducing salt stress in plants growing in saline soil. Understanding the processes underlying these physiological and biochemical responses to salt stress might lead to more effective crop yield control measures in the future. In order to address this information, the current review discusses recent advances in plant stress mechanisms against salinity stress-mediated antioxidant systems, as well as the development of appropriate long-term strategies for plant growth mediated by CRISPR/Cas9 techniques under salinity stress.
- Published
- 2023
- Full Text
- View/download PDF
44. Exo-polysaccharide producing bacteria can induce maize plant growth and soil health under saline conditions.
- Author
-
Chauhan PK and Upadhyay SK
- Subjects
- Soil chemistry, Salinity, Polysaccharides, Bacterial metabolism, Polysaccharides, Bacterial biosynthesis, Plant Roots microbiology, Plant Roots growth & development, Salt Stress, Sodium Chloride metabolism, Salt Tolerance, Zea mays microbiology, Zea mays growth & development, Zea mays metabolism, Soil Microbiology
- Abstract
Salt tolerant plant growth boosting rhizobacteria can play an important function in plant salinity stress mitigation. In the current investigation, only two rhizobacterial isolates out of 68 produced exo-polysaccharide at the fastest rate and exhibited plant growth promoting properties such as IAA, CAT, APX production, and phosphate solubilization at 6% NaCl (w/v) concentration. Both isolates had synergistic PGP features and were compatible with one another. Isolate SP-20 was identified as Kluyvera sp. and SP-203 was identified as Enterobacter sp. -by 16SrDNA sequencing. After 30, 60, and 90 days, the combination of SP-20 and SP-203 enhanced the physicochemical parameters in the maize plant in comparison to the control. By increasing soil enzymes like DHA and PPO, both isolates significantly improved the soil health matrix. When a group of these isolates were inoculated into 1% and 2% NaCl (w/v) supplemented soil, the absorption of Na in the shoot and root of maize plants was inhibited by around 50%. The BCF values for all treatments were less than TF, and the values of BCF and TF were less than one. Therefore, the present study illustrated that the novel native isolates play a remarkable role to mitigate salinity stress in maize plant.
- Published
- 2023
- Full Text
- View/download PDF
45. Comparison of diversity and zinc solubilizing efficiency of rhizobacteria obtained from solanaceous crops under polyhouse and open field conditions.
- Author
-
Rani N, Kaur G, Kaur S, Mutreja V, Upadhyay SK, and Tripathi M
- Subjects
- Crops, Agricultural microbiology, Crops, Agricultural metabolism, Bacteria metabolism, Bacteria genetics, Bacteria classification, Capsicum microbiology, Capsicum metabolism, Capsicum growth & development, Soil chemistry, Solubility, Indoleacetic Acids metabolism, Solanum lycopersicum microbiology, Solanum lycopersicum metabolism, Solanum lycopersicum growth & development, Zinc metabolism, Soil Microbiology, Rhizosphere
- Abstract
Zinc-solubilizing bacteria (Zn-SB) play a crucial role in regulating soil fertility and plant health by maintaining Zn availability in the rhizosphere. It is uncertain how the Zn-SB population fluctuates across various cultivation systems since varied land-use patterns for agricultural aims may affect microbial activity and plant development effectiveness. The current study aims to examine the Zn-SB potential of various farming systems using Solanum lycopersicum, Solanum melongena , and Capsicum annuum grown in polyhouse soil (PS) and open fields (OF). Only twenty rhizobacterial isolates from PS and two isolates from OF out of 80 showed a strong ability to solubilize Zn, which was evaluated using Atomic Absorption Spectroscopy. Bacterial strain-PS4 solubilized 253.06 ppm of ZnO and produced a high quantity of lactic acid (168.62 g/ml) and acetic acid (470.5 g/ml), whereas bacterial strain OF1 solubilized 16.02 ppm of ZnO by releasing glycolic acid (42.89 g/ml), lactic acid (22.30 g/ml), formic acid (106.03 g/ml), and acetic acid (48.5 µg/ml). Further, in vitro studies demonstrated higher production of auxin, gibberellic acid and siderophore by PS1 as compared to OF1 strain. A large diversity of Zn-SB in the soil was indicated by biochemical analysis, which revealed that isolates belonged to the families Enterobacteriaceae, Bacillaceae, Burkholderiaceae, Streptococcaceae, Paenibacillaceae, Micrococcaceae, Morganellaceae , and Dietziaceae . The isolates PS4 and OF1 were identified as Bacillus cereus and Enterobacter hormaechei , respectively, using 16S rRNA sequencing. The findings show that soil from polyhouses has a greater diversity of Zn-solubilization rhizobacteria than soil from open areas. The findings suggested a potential land-use method for enhancing crop yields by employing microorganisms and polyhouse technology, which could be useful in the future study.
- Published
- 2023
- Full Text
- View/download PDF
46. Phytochemistry and biological activity of Erigeron annuus (L.) Pers.
- Author
-
Rana R, Pundir S, Lal UR, Chauhan R, Upadhyay SK, and Kumar D
- Subjects
- Medicine, Traditional, Plant Extracts pharmacology, Plant Extracts chemistry, Phytochemicals pharmacology, Plant Leaves, Phytotherapy, Erigeron
- Abstract
Erigeron annuus L. is a flowering herb of North America, Europe, Asia and Russia. This plant is used as folk medicine in China for the cure of indigestion, enteritis, epidemic hepatitis, haematuria and diabetes. Phytochemical studies showed the presence of 170 bioactive compounds like coumarins, flavonoids, terpenoids, polyacetylenic compounds; γ-pyrone derivatives, sterols and various caffeoylquinic acids derived from the essential oil and organic extracts from its various parts such as aerial parts, roots, leaves, stems and flowers. The pharmacological studies demonstrated various extracts and the compounds of E. annuus to exhibit anti-fungal, anti-atherosclerosis, anti-inflammatory, antidiabetic, phytotoxic, cytoprotective, antiobesity and antioxidant activities. This article covers a critical compendious on geographical distribution, botanical description, phytochemistry, ethnomedicinal uses and pharmacological activities of E. annuus. However, further in-depth studies are needed to determine the medical uses of E. annuus and its chemical constituents, pharmacological activities and clinical applications., (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
- Published
- 2023
- Full Text
- View/download PDF
47. Editorial: Adaptation of halophilic/halotolerant microorganisms and their applications.
- Author
-
Martínez-Espinosa RM, Kumar S, Upadhyay SK, and Orhan F
- Abstract
Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
- Published
- 2023
- Full Text
- View/download PDF
48. Failure of methanol detoxification in pests confers broad spectrum insect resistance in PME overexpressing transgenic cotton.
- Author
-
Srivastava A, Jain G, Sushmita, Chandra S, Kalia V, Upadhyay SK, Dubey RS, and Verma PC
- Subjects
- Animals, Methanol metabolism, Catalase metabolism, Gossypium genetics, Gossypium metabolism, Insecta metabolism, Plants, Genetically Modified metabolism, Larva metabolism, Cytochrome P-450 Enzyme System genetics, Cytochrome P-450 Enzyme System metabolism, Moths metabolism, Hemiptera
- Abstract
Methanol is noxious to insect pests, but most plants do not make enough of it to shield themselves from encroaching insects. Methanol emission is known to increase in the instance of herbivory. In the current study, we showed that Aspergillus niger pectin methylesterase over-expression increases methanol emission and confers resistance to polyphagous insect pests on transgenic cotton plants by impeding the possible methanol detoxification pathways. Transgenic plants emitted ∼11 fold higher methanol displaying insect mortality of 96% and 93% in Helicoverpa armigera and Spodoptera litura, respectively. The larvae were unable to survive and finish their life cycle and the surviving larvae exhibited severe growth retardation. Insects try to detoxify methanol via catalase, carboxylesterase and cytochrome P450 monooxygenase enzymes, amongst which cytochrome P450 plays a major role in oxidizing methanol to formaldehyde and formaldehyde to formic acid, which is broken down into carbon dioxide and water. In our study, catalase and esterase enzymes were found to be upregulated, but cytochrome P450 monooxygenase levels were not much affected. Leaf disc assays and In-planta bioassays also showed 50-60% population reduction in the sap sucking pests, such as Bemisia tabaci and Phenacoccus solenopsis. These findings imply that elevated methanol emissions confer resistance in plants against chewing and sap-sucking pests by tampering the methanol detoxification pathways. Such mechanism will be useful in imparting expansive resistance against pests in plants., Competing Interests: Declaration of Competing Interest Authors declare no conflict of interest with anyone., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2023
- Full Text
- View/download PDF
49. A review on simultaneous heavy metal removal and organo-contaminants degradation by potential microbes: Current findings and future outlook.
- Author
-
Upadhyay SK, Rani N, Kumar V, Mythili R, and Jain D
- Subjects
- Humans, Animals, Ecosystem, Bacteria metabolism, Biodegradation, Environmental, Metals, Heavy metabolism, Environmental Pollutants, Pesticides metabolism, Soil Pollutants metabolism
- Abstract
Industrial processes result in the production of heavy metals, dyes, pesticides, polyaromatic hydrocarbons (PAHs), pharmaceuticals, micropollutants, and PFAS (per- and polyfluorinated substances). Heavy metals are currently a significant problem in drinking water and other natural water bodies, including soil, which has an adverse impact on the environment as a whole. The heavy metal is highly poisonous, carcinogenic, mutagenic, and teratogenic to humans as well as other animals. Multiple polluted sites, including terrestrial and aquatic ecosystems, have been observed to co-occur with heavy metals and organo-pollutants. Pesticides and heavy metals can be degraded and removed concurrently from various metals and pesticide-contaminated matrixes due to microbial processes that include a variety of bacteria, both aerobic and anaerobic, as well as fungi. Numerous studies have examined the removal of heavy metals and organic-pollutants from different types of systems, but none of them have addressed the removal of these co-occurring heavy metals and organic pollutants and the use of microbes to do so. Therefore, the main focus of this review is on the recent developments in the concurrent microbial degradation of organo-pollutants and heavy metal removal. The limitations related to the simultaneous removal and degradation of heavy metals and organo-pollutant pollutants have also been taken into account., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier GmbH. All rights reserved.)
- Published
- 2023
- Full Text
- View/download PDF
50. Phosphate Deficiency: A Tale from the End of PILNCR2.
- Author
-
Upadhyay SK
- Abstract
A deficiency in inorganic phosphate (Pi) induces the expression of miRNA399 and the accumulation of its target Pi transporters ( PHT1s ) mRNA, which is contrary to the goal of miRNA-mediated gene regulation. Recently, a novel mechanism of RNA/RNA-duplex formation between the transcripts of a Pi deficiency-induced long non-coding RNA ( PILNCR2 ) and PHT1s has been reported, which prevents the binding and cleavage of miRNA399 to PHT1 mRNAs, thereby providing tolerance of Pi-deficient conditions. Moreover, the way in which ribosomes move through the RNA/RNA-duplex for the translation of PHT1 transporter proteins remains elusive.
- Published
- 2023
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.