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In geographic information systems (GIS), analysts answer questions by designing workflows that transform a certain type of data into a certain type of goal. Semantic data types help constrain the application of computational methods to those that are meaningful for such a goal. This prevents pointless computations and helps analysts design effective workflows. Yet, to date it remains unclear which types would be needed in order to ease geo-analytical tasks. The data types and formats used in GIS still allow for huge amounts of syntactically possible but nonsensical method applications. Core concepts of spatial information and related geo-semantic distinctions have been proposed as abstractions to help analysts formulate analytic questions and to compute appropriate answers over geodata of different formats. In essence, core concepts reflect particular interpretations of data which imply that certain transformations are possible. However, core concepts usually remain implicit when operating on geodata, since a concept can be represented in a variety of forms. A central question therefore is: Which semantic types would be needed to capture this variety and its implications for geospatial analysis? In this article, we propose an ontology design pattern of core concept data types that help answer geo-analytical questions. Based on a scenario to compute a liveability atlas for Amsterdam, we show that diverse kinds of geo-analytical questions can be answered by this pattern in terms of valid, automatically constructible GIS workflows using standard sources.

Scientific data analyses often combine several computational tools in automated pipelines, or workflows. Thousands of such workflows have been used in the life sciences, though their composition has remained a cumbersome manual process due to a lack of standards for annotation, assembly, and implementation. Recent technological advances have returned the long-standing vision of automated workflow composition into focus. This article summarizes a recent Lorentz Center workshop dedicated to automated composition of workflows in the life sciences. We survey previous initiatives to automate the composition process, and discuss the current state of the art and future perspectives. We start by drawing the “big picture” of the scientific workflow development life cycle, before surveying and discussing current methods, technologies and practices for semantic domain modelling, automation in workflow development, and workflow assessment. Finally, we derive a roadmap of individual and community-based actions to work toward the vision of automated workflow development in the forthcoming years. A central outcome of the workshop is a general description of the workflow life cycle in six stages: 1) scientific question or hypothesis, 2) conceptual workflow, 3) abstract workflow, 4) concrete workflow, 5) production workflow, and 6) scientific results. The transitions between stages are facilitated by diverse tools and methods, usually incorporating domain knowledge in some form. Formal semantic domain modelling is hard and often a bottleneck for the application of semantic technologies. However, life science communities have made considerable progress here in recent years and are continuously improving, renewing interest in the application of semantic technologies for workflow exploration, composition and instantiation. Combined with systematic benchmarking with reference data and large-scale deployment of production-stage workflows, such technologies enable a more systematic process of workflow development than we know today. We believe that this can lead to more robust, reusable, and sustainable workflows in the future.