4 results on '"Verena Kallnik"'
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2. Properties of recombinant Strep-tagged and untagged hyperthermophilic D-arabitol dehydrogenase from Thermotoga maritima
- Author
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Verena, Kallnik, Christian, Schulz, Christian, Schultz, Paul, Schweiger, and Uwe, Deppenmeier
- Subjects
Recombinant Fusion Proteins ,Gene Expression ,Dehydrogenase ,medicine.disease_cause ,Applied Microbiology and Biotechnology ,Substrate Specificity ,Bacterial Proteins ,Enzyme Stability ,medicine ,Thermotoga maritima ,Escherichia coli ,Thermostability ,chemistry.chemical_classification ,biology ,General Medicine ,biology.organism_classification ,Thermotoga ,Rare sugar ,Kinetics ,Enzyme ,chemistry ,Biochemistry ,NAD+ kinase ,Sugar Alcohol Dehydrogenases ,Biotechnology - Abstract
The first hyperthermophilic D-arabitol dehydrogenase from Thermotoga maritima was heterologously purified from Escherichia coli. The protein was purified with and without a Strep-tag. The enzyme exclusively catalyzed the NAD(H)-dependent oxidoreduction of D-arabitol, D-xylitol, D-ribulose, or D-xylulose. A twofold increase of catalytic rates was observed upon addition of Mg(2+) or K(+). Interestingly, only the tag-less protein was thermostable, retaining 90% of its activity after 90 min at 85 °C. However, the tag-less form of D-arabitol dehydrogenase had similar kinetic parameters compared to the tagged enzyme, demonstrating that the Strep-tag was not deleterious to protein function but decreased protein stability. A single band at 27.6 kDa was observed on SDS-PAGE and native PAGE revealed that the protein formed a homohexamer and a homododecamer. The enzyme catalyzed oxidation of D-arabitol to D: -ribulose and therefore belongs to the class of D-arabitol 2-dehydrogenases, which are typically observed in yeast and not bacteria. The product D-ribulose is a rare ketopentose sugar that has numerous industrially applications. Given its thermostability and specificity, D-arabitol 2-dehydrogenase is a desirable biocatalyst for the production of rare sugar precursors.
- Published
- 2011
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3. Characterization of a phosphotriesterase-like lactonase from the hyperthermoacidophilic crenarchaeon Vulcanisaeta moutnovskia
- Author
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Alina Bunescu, Jennifer A. Littlechild, Roland Wohlgemuth, C. Sayer, Christopher Bräsen, Bettina Siebers, and Verena Kallnik
- Subjects
Stereochemistry ,Cations, Divalent ,Chemie ,Gene Expression ,Bioengineering ,medicine.disease_cause ,Applied Microbiology and Biotechnology ,Substrate Specificity ,Lactones ,Enzyme Stability ,medicine ,Lactonase ,Cloning, Molecular ,Escherichia coli ,Thermoproteaceae ,Thermostability ,chemistry.chemical_classification ,biology ,Thermophile ,General Medicine ,Hydrogen-Ion Concentration ,biology.organism_classification ,Sulfolobus ,Kinetics ,Enantiopure drug ,Enzyme ,Phosphoric Triester Hydrolases ,chemistry ,Biochemistry ,biology.protein ,Stereoselectivity ,Biologie ,Carboxylic Ester Hydrolases ,Biotechnology - Abstract
The phosphotriesterase-like lactonase (PLL) encoded by Vmut_2255 in the hyperthermoacidophilic crenarchaeon Vulcanisaeta moutnovskia (VmutPLL), represents the only hyperthermophilic PLL homologue identified so far in addition to the previously characterized thermophilic PLLs from Sulfolobus spp. The Vmut_2255 gene was cloned, heterologously expressed in Escherichia coli ; the resultant protein purified and characterized as a 82 kDa homodimer (36 kDa subunits). The VmutPLL converted lactones and acyl-homoserine lactones (AHLs) with comparable activities. Towards organophosphates (OP) VmutPLL showed a promiscuous but significantly lower activity and only minor activity was observed with carboxylesters. The catalytic activity strictly depended on bivalent cations (Cd 2+ > Ni 2+ > Co 2+ > Mn 2+ > Zn 2+ ). Furthermore, VmutPLL showed a pH optimum around 8.0, a temperature optimum of 80 °C, and thermostability with a half-life of 26 min at 90 °C. In this work, the stereoselectivity of a PLL enzyme was investigated for the first time using enantiopure lactones. The VmutPLL showed a slight preference but not an exclusive specificity for the (R)-enantiomers of capro- and valerolactone. The high thermal stability as well as the broad substrate spectrum towards lactones, AHLs and OPs underlines the high biotechnological potential of VmutPLL.
- Published
- 2014
4. Function of Ech hydrogenase in ferredoxin-dependent, membrane-bound electron transport in Methanosarcina mazei
- Author
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Uwe Deppenmeier, Cornelia U. Welte, Marcel Grapp, Güneş Bender, Verena Kallnik, and Steve Ragsdale
- Subjects
inorganic chemicals ,Hydrogenase ,Stereochemistry ,Archaeal Proteins ,Physiology and Metabolism ,ved/biology.organism_classification_rank.species ,Respiratory chain ,Microbiology ,Formylmethanofuran dehydrogenase ,Models, Biological ,Electron Transport ,03 medical and health sciences ,Oxidoreductase ,Methanosarcina acetivorans ,Molecular Biology ,Ferredoxin ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Membranes ,biology ,030306 microbiology ,ved/biology ,Methanosarcina ,biology.organism_classification ,chemistry ,Biochemistry ,13. Climate action ,Mutation ,bacteria ,Ferredoxins ,Methanosarcina barkeri ,Oxidoreductases - Abstract
Reduced ferredoxin is an intermediate in the methylotrophic and aceticlastic pathway of methanogenesis and donates electrons to membrane-integral proteins, which transfer electrons to the heterodisulfide reductase. A ferredoxin interaction has been observed previously for the Ech hydrogenase. Here we present a detailed analysis of a Methanosarcina mazei ech mutant which shows decreased ferredoxin-dependent membranebound electron transport activity, a lower growth rate, and faster substrate consumption. Evidence is presented that a second protein whose identity is unknown oxidizes reduced ferredoxin, indicating an involvement in methanogenesis from methylated C1 compounds. The aceticlastic pathway of methanogenesis creates approximately 70% (10) of the biologically produced methane and is of great ecological importance, as methane is a potent greenhouse gas. Organisms using this pathway to convert acetate to methane belong exclusively to the genera Methanosarcina and Methanosaeta. The two carbon atoms of acetate have different fates in the pathway. The methyl moiety is converted to methane, whereas the carbonyl moiety is further oxidized to CO2 and the electrons derived from this oxidation step are used to reduce ferredoxin (Fd) (6). During methanogenesis from methylated C1 compounds (methanol and methylamines), onequarter of the methyl groups are oxidized to obtain electrons for the reduction of heterodisulfide (27). A key enzyme in the oxidative part of methylotrophic methanogenesis is the formylmethanofuran dehydrogenase, which oxidizes the intermediate formylmethanofuran to CO2 (7). The electrons are transferred to Fd. It has been suggested that reduced ferredoxin (Fdred) donates electrons to the respiratory chain with the heterodisulfide (coenzyme M [CoM]-S-S-CoB) as the terminal electron acceptor and that the reaction is catalyzed by the Fdred:CoMS-S-CoB oxidoreductase system (7, 24). The direct membranebound electron acceptor for Fdred is still a matter of debate; for the Ech hydrogenase, a reduced ferredoxin-accepting, H2evolving activity has been observed for Methanosarcina barkeri (20), which implies that the H2:CoM-S-S-CoB oxidoreductase system is involved in electron transport (13). Direct electron flow from the Ech hydrogenase to the heterodisulfide reductase has not been shown to date (20, 21). In contrast to M. barkeri, Methanosarcina acetivorans lacks the Ech hydrogenase (11). It can nevertheless grow on acetate, which is why another complex present in this organism, the Rnf complex, is thought
- Published
- 2009
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