1. The complex genetics of gait speed: genome-wide meta-analysis approach
- Author
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Steven R. Cummings, Dan Mellström, Ian J. Deary, Jennifer A. Smith, David Karasik, Dena G. Hernandez, Beverly G Windham, David C. Liewald, Maria Nethander, D. S. Knopman, Sharon L.R. Kardia, Velandai Srikanth, Rotem Vered, Albert V. Smith, Joanne M. Murabito, Magnus Karlsson, Alice M. Arnold, Tamara B. Harris, Joris Deelen, Philip L. De Jager, Janie Corley, Andrew D. Johnson, Hieab H.H. Adams, Jos N. van der Geest, Neeta Parimi, A.B. Newman, Gail Davies, David R. Weir, Yongmei Liu, Russell Thomson, John M. Starr, David A. Bennett, Joe Verghese, Lei Yu, Aron S. Buchman, Jessica D. Faul, Gil Atzmon, Gregory J. Tranah, Myriam Fornage, Douglas P. Kiel, Marian Beekman, Alison Pattie, Vilmundur Gudnason, Claes Ohlsson, Toshiko Tanaka, Lenore J. Launer, Daniel S. Evans, Vincent J. A. Verlinden, Michele L. Callisaya, Jeanine J. Houwing-Duistermaat, Stephen Turner, Luigi Ferrucci, Albert Hofman, Simon P. Mooijaart, Danielle Gutman, Rebekah McWhirter, M. Arfan Ikram, André G. Uitterlinden, Wei Zhao, Jeremy D. Walston, Amy M. Matteini, Denis A. Evans, Matthijs Moed, Stefania Bandinelli, Danny Ben-Avraham, John D. Eicher, Thomas H. Mosley, Eline Slagboom, Kathryn L. Lunetta, Lital Sharvit, Epidemiology, Radiology & Nuclear Medicine, Neurosciences, and Internal Medicine
- Subjects
0301 basic medicine ,Genetics ,Aging ,medicine.medical_specialty ,aging ,Genome-wide association study ,Single-nucleotide polymorphism ,Cell Biology ,Quantitative trait locus ,Genome ,meta-analysis ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Geography ,meta‐analysis ,Meta-analysis ,Genetic variation ,Expression quantitative trait loci ,medicine ,GWAS ,Medical genetics ,gait speed ,030217 neurology & neurosurgery - Abstract
Emerging evidence suggests that the basis for variation in late-life mobility is attributable, in part, to genetic factors, which may become increasingly important with age. Our objective was to systematically assess the contribution of genetic variation to gait speed in older individuals. We conducted a meta-analysis of gait speed GWASs in 31,478 older adults from 17 cohorts of the CHARGE consortium, and validated our results in 2,588 older adults from 4 independent studies. We followed our initial discoveries with network and eQTL analysis of candidate signals in tissues. The meta-analysis resulted in a list of 536 suggestive genome wide significant SNPs in or near 69 genes. Further interrogation with Pathway Analysis placed gait speed as a polygenic complex trait in five major networks. Subsequent eQTL analysis revealed several SNPs significantly associated with the expression of PRSS16, WDSUB1 and PTPRT, which in addition to the meta-analysis and pathway suggested that genetic effects on gait speed may occur through synaptic function and neuronal development pathways. No genome-wide significant signals for gait speed were identified from this moderately large sample of older adults, suggesting that more refined physical function phenotypes will be needed to identify the genetic basis of gait speed in aging.
- Published
- 2017
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