31 results on '"Virata M"'
Search Results
2. Simultaneous phytoremediation of Cu2+ and bioelectricity generation in a plant-microbial fuel cell assembly growing Azolla pinnata and Lemna minor
- Author
-
Pamintuan, K R S, primary, Virata, M M D, additional, and Yu, M F C, additional
- Published
- 2019
- Full Text
- View/download PDF
3. Unexplained deaths due to possibly infectious causes in the United States: defining the problem and designing surveillance and laboratory approaches. The Unexplained Deaths Working Group
- Author
-
Perkins, B. A., Flood, J. M., Danila, R., Holman, R. C., Reingold, A. L., Klug, L. A., Virata, M., Cieslak, P. R., Zaki, S. R., Pinner, R. W., and Khabbaz, R. F.
- Subjects
Male ,Cause of Death ,Humans ,Female ,Infections ,Death Certificates ,United States ,Research Article - Published
- 1996
4. Vanishing bile duct syndrome in a HIV patient on HAART therapy
- Author
-
Gnanaraj, J., primary, Fiedler, P., additional, and Virata, M., additional
- Published
- 2011
- Full Text
- View/download PDF
5. Invasive Pneumococcal Disease: Clinical Features, Serotypes, and Antimicrobial Resistance Patterns in Cases Involving Patients with and Without Human Immunodeficiency Virus Infection
- Author
-
Frankel, R. E., primary, Virata, M., additional, Hardalo, C., additional, Altice, F. L., additional, and Friedland, G., additional
- Published
- 1996
- Full Text
- View/download PDF
6. Functional analysis of desmoplakin domains: specification of the interaction with keratin versus vimentin intermediate filament networks.
- Author
-
Stappenbeck, T S, primary, Bornslaeger, E A, additional, Corcoran, C M, additional, Luu, H H, additional, Virata, M L, additional, and Green, K J, additional
- Published
- 1993
- Full Text
- View/download PDF
7. Structure of Desmoplakin and Its Association with Intermediate Filaments
- Author
-
Green, Kathleen J., primary, Stappenbeck, Thaddeus S., additional, Parry, David A.D., additional, and Virata, M. Luisa A., additional
- Published
- 1992
- Full Text
- View/download PDF
8. Molecular structure of the human desmoplakin I and II amino terminus.
- Author
-
Virata, M L, primary, Wagner, R M, additional, Parry, D A, additional, and Green, K J, additional
- Published
- 1992
- Full Text
- View/download PDF
9. Desmoplakins: Predicted structure and functional implications
- Author
-
VIRATA, M, primary, PARRY, D, additional, STEINERT, P, additional, WAGNER, R, additional, ANGST, B, additional, NILLES, L, additional, and GREEN, K, additional
- Published
- 1990
- Full Text
- View/download PDF
10. Structure of the human desmoplakins. Implications for function in the desmosomal plaque.
- Author
-
Green, K J, primary, Parry, D A, additional, Steinert, P M, additional, Virata, M L, additional, Wagner, R M, additional, Angst, B D, additional, and Nilles, L A, additional
- Published
- 1990
- Full Text
- View/download PDF
11. Invasive pneumococcal disease: clinical features, serotypes, and antimicrobial resistance patterns in cases involving patients with and without human immunodeficiency virus infection
- Author
-
Frankel, R.E., Virata, M., Hardalo, C., Altice, F.L., and Friedland, G.
- Subjects
Pneumonia, Pneumococcal -- Research ,Bacteremia -- Causes of - Published
- 1996
12. The Feasibility and Acceptability of a Clinical Pharmacist-delivered Intervention to Reduce Bothersome Health Symptoms from Polypharmacy and Alcohol Use and Communicate Risk among People with HIV: Pilot Study Protocol.
- Author
-
Womack JA, Leblanc MM, Sager AS, Zaets LN, Maisto SA, Garcia A, Aoun-Barakat L, Brown SE, Edelman EJ, Fiellin DA, Fisher J, Fraenkel L, Kidwai-Khan F, Marconi VC, Martino S, Pulk R, Satre DD, Virata M, Justice AC, and Hsieh E
- Subjects
- Humans, Pilot Projects, Male, Female, Veterans psychology, Alcohol Drinking prevention & control, Alcohol Drinking psychology, Middle Aged, Adult, Communication, Patient Acceptance of Health Care psychology, Alcoholism, HIV Infections prevention & control, HIV Infections drug therapy, HIV Infections psychology, Feasibility Studies, Polypharmacy, Pharmacists, Motivational Interviewing, Counseling methods
- Abstract
Among persons with HIV (PWH), unhealthy alcohol use and polypharmacy contribute to bothersome symptoms (e.g., fatigue, dizziness, memory loss). However, effective risk communication targeting these associations is challenging. The HIV and Alcohol Research center focused on Polypharmacy (HARP) is conducting a pilot study that will generate feasibility and acceptability data on a clinical pharmacist-delivered counseling intervention targeting the modification of unhealthy alcohol use and polypharmacy in PWH. Counseling is guided by the Information-Motivation-Behavioral Skills-Motivational Interviewing (IMB-MI) model. Herein, we describe the study protocol. This pilot uses a one-group pre-test/post-test design. We will recruit 50 participants from those who participated in the consented cohort of the Veterans Aging Cohort Study. Participants must be prescribed ≥ 5 long-term medications, have a self-reported Alcohol Use Disorders Identification Test score > 0, and be living with HIV. We will exclude those with moderate-severe alcohol use disorder as identified by an Alcohol Symptom Checklist score ≥ 4. Data are collected using three self-administered surveys (baseline, immediately after booster intervention, and 30-days post-intervention), two PEth blood tests (baseline, 30 days post-intervention), and medication data from the electronic health record (baseline). The intervention includes a 60-minute IMB-MI-based counseling session followed by a booster session 2 weeks later. Some participants will also be asked to participate in a qualitative interview to provide feedback on the intervention. The pilot investigates the impact of an intervention on alcohol consumption and the use of multiple medications among PWH, exploring how best to reduce bothersome symptoms, communicate risk, and support behavior change in this population., Competing Interests: Declarations. Competing Interests: None of the other authors report competing interests. ClinicalTrials.gov Identifier: NCT05560932., (© 2024. This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply.)
- Published
- 2025
- Full Text
- View/download PDF
13. Five-year evaluation of Anal Cancer Screening Program in Men Who Have Sex With Men with HIV at Two Academic Center Clinics.
- Author
-
Achhra AC, Chan E, Applebaum S, Guerrero M, Hao R, Pantel H, Virata M, Fikrig M, and Barakat L
- Abstract
Background: Guidelines recommend annual anal cytology-based squamous cell carcinoma of anus (SCCA) screening for men who have sex with men (MSM) with HIV aged ≥35 years (eligible population). Recommended threshold for high resolution anoscopy (HRA) depends on its availability: low-threshold (any abnormal cytology) if availability is high, and high-threshold (High-Grade Squamous Intraepithelial Lesion (HSIL) on cytology) if availability is low., Methods: Retrospective chart review (2018-2022) at academic HIV clinics. We evaluate (i) 5-year uptake of cytology based SCCA screening in eligible population; (ii) estimate HSIL detection rate based on our current low-threshold criteria, and if high-threshold criteria were used for HRA referral., Results: Of 432 eligible individuals, only 219 (50.7%) had at least one, and only 113 (26%) had >1 SCCA screening tests in a median followup of 4 years. N=74 (17.1%) of individuals had at least one abnormal anal cytology during follow-up, of which 56 (75.6%) received HRA. Increasing age (≥57 years) and history of smoking negatively correlated with ever receiving screening. Anal cytology (365 tests in 206 individuals) showed: 17.5% 'unsatisfactory', and 26.8% with any abnormal cytology (zero with HSIL) triggering HRA referral. Only 34 individuals (7.8% of screening eligible) were ever detected with HSIL. Strictly using high-threshold criterion for HRA referral would have led to no HRA or HSIL detection., Conclusions: We noted poor uptake of screening over time, particularly in older age groups. Importantly, anal cytology performed poorly as a triage test for HRA referral: high rates of 'unsatisfactory' samples and low sensitivity for detecting HSIL., (© The Author(s) 2024. Published by Oxford University Press on behalf of Infectious Diseases Society of America. All rights reserved. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.)
- Published
- 2024
- Full Text
- View/download PDF
14. Evaluation of somatic copy number variation detection by NGS technologies and bioinformatics tools on a hyper-diploid cancer genome.
- Author
-
Masood D, Ren L, Nguyen C, Brundu FG, Zheng L, Zhao Y, Jaeger E, Li Y, Cha SW, Halpern A, Truong S, Virata M, Yan C, Chen Q, Pang A, Alberto R, Xiao C, Yang Z, Chen W, Wang C, Cross F Jr, Catreux S, Shi L, Beaver JA, Xiao W, and Meerzaman DM
- Subjects
- Humans, Diploidy, Genome, Human, Cell Line, Tumor, Reproducibility of Results, Sequence Analysis, DNA methods, DNA Copy Number Variations, High-Throughput Nucleotide Sequencing methods, Software, Neoplasms genetics, Computational Biology methods, Loss of Heterozygosity
- Abstract
Background: Copy number variation (CNV) is a key genetic characteristic for cancer diagnostics and can be used as a biomarker for the selection of therapeutic treatments. Using data sets established in our previous study, we benchmark the performance of cancer CNV calling by six most recent and commonly used software tools on their detection accuracy, sensitivity, and reproducibility. In comparison to other orthogonal methods, such as microarray and Bionano, we also explore the consistency of CNV calling across different technologies on a challenging genome., Results: While consistent results are observed for copy gain, loss, and loss of heterozygosity (LOH) calls across sequencing centers, CNV callers, and different technologies, variation of CNV calls are mostly affected by the determination of genome ploidy. Using consensus results from six CNV callers and confirmation from three orthogonal methods, we establish a high confident CNV call set for the reference cancer cell line (HCC1395)., Conclusions: NGS technologies and current bioinformatics tools can offer reliable results for detection of copy gain, loss, and LOH. However, when working with a hyper-diploid genome, some software tools can call excessive copy gain or loss due to inaccurate assessment of genome ploidy. With performance matrices on various experimental conditions, this study raises awareness within the cancer research community for the selection of sequencing platforms, sample preparation, sequencing coverage, and the choice of CNV detection tools., (© 2024. This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply.)
- Published
- 2024
- Full Text
- View/download PDF
15. International collaborative study to assess new stocks of candidate reference preparations to control the level of anti-D in IVIG
- Author
-
Thorpe SJ, Virata ML, Fox B, and Terao E
- Subjects
- Humans, Immunoglobulins, Intravenous standards, Immunoglobulins, Intravenous pharmacology, Immunoglobulins, Intravenous analysis, Rho(D) Immune Globulin, Chemistry, Pharmaceutical standards, Chemistry, Pharmaceutical methods, Reference Standards
- Abstract
The level of anti-D antibodies in human immunoglobulin products for intravenous administration (IVIG) is controlled by the direct haemagglutination method prescribed by the European Pharmacopoeia (Ph. Eur.) that requires 2 control reference reagents. The World Health Organization (WHO) positive control International Reference Reagent (IRR; 02/228) with a nominal titre of 8 defines the highest acceptable titre, while the negative control preparation (02/226) has a nominal titre of <2. Working reference preparations (04/132 and 04/140) were subsequently established as Biological Reference Preparations (BRPs) for the Ph. Eur., and for distribution by the United States Food and Drug Administration (US FDA) and the National Institute for Biological Standards and Control (NIBSC). Due to diminishing stocks of these working reference preparations across the 3 institutions, a joint international study was organised to establish harmonised replacement batches. Sixteen laboratories contributed data to the study to evaluate positive and negative candidate replacement batches (13/148 and 12/300, respectively) against the WHO positive and negative control IRRs and the current working reference preparations (BRPs). The results show that the candidate reference preparations (13/148 and 12/300) are indistinguishable from the corresponding IRRs and current BRPs. The candidate preparations 13/148 and 12/300 were adopted by the Ph. Eur. Commission as Immunoglobulin (anti-D antibodies test) BRP batch 2 and Immunoglobulin (anti-D antibodies test negative control) BRP batch 2 with nominal haemagglutination titres of 8 and <2, respectively. The same materials were also adopted as NIBSC and US FDA reference preparations, thus ensuring full harmonisation., (© Council of Europe 2024.)
- Published
- 2024
16. Perspectives on unhealthy alcohol use among men who have sex with men prescribed HIV pre-exposure prophylaxis: A qualitative study.
- Author
-
Strong SH, Oldfield BJ, van den Berg JJ, Cole CA, Biegacki E, Ogbuagu O, Virata M, Chan PA, and Edelman EJ
- Abstract
Unhealthy alcohol use is a common, often unaddressed behavior associated with increased risk for acquisition of HIV and may also be associated with decreased adherence to oral pre-exposure prophylaxis (PrEP) among gay, bisexual, and other men who have sex with men (MSM) living in the United States. To inform future alcohol-reduction interventions among individuals engaging in PrEP care, we sought to explore perspectives on alcohol use, PrEP adherence, and the acceptability of alcohol use treatment options for MSM prescribed oral formulations of PrEP in the Northeastern United States. Between February 2019 and July 2020, we conducted semi-structured interviews with 15 MSM without HIV who were prescribed PrEP and screened positive for unhealthy alcohol use with AUDIT-C ≥ 4 and were receiving care in Providence, Rhode Island or New Haven, Connecticut. Interviews were coded and analyzed using thematic analysis. Three themes emerged: 1) Consequences of fluctuations in drinking 2) Alcohol use negatively impacts health and relationships; and 3) Desire for a multimodal approach to treatment of unhealthy alcohol use. Our findings support the need to raise awareness of potential alcohol-related harms, address the spectrum of unhealthy alcohol use among MSM prescribed PrEP, and the acceptability and preferences for alcohol reduction interventions within PrEP programs., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2023 The Authors.)
- Published
- 2023
- Full Text
- View/download PDF
17. Building an Infectious Disease Diversity, Equity, and Antiracism (ID2EA) Curriculum: A Single Center's Experience and Reflections.
- Author
-
Gleeson SE, Zapata H, Bathgate ME, Emu B, Frederick J, Friedland G, Golden MP, Meyer JP, Radin J, Sideleau R, Shaw A, Shenoi SV, Trubin PA, Virata M, Barakat LA, and Desruisseaux MS
- Subjects
- Humans, Antiracism, Curriculum, COVID-19, Racism, Communicable Diseases therapy
- Abstract
In response to longstanding healthcare inequities unmasked by the Coronavirus Disease 2019 pandemic, the infectious diseases (ID) section at the Yale School of Medicine designed and implemented a pilot curriculum integrating Infectious Disease Diversity, Equity, and Antiracism (ID2EA) into ID educational training and measured program outcomes. We herein describe a mixed-methods assessment of section members on whether the ID2EA curriculum affected their beliefs and behaviors regarding racism and healthcare inequities. Participants rated the curriculum as useful (92% averaging across sessions) and effective in achieving stated learning objectives (89% averaging across sessions), including fostering understanding of how inequities and racism are linked to health disparities and identifying strategies to effectively deal with racism and inequities. Despite limitations in response rates and assessment of longer-term behavioral change, this work demonstrates that training in diversity, equity, and antiracism can be successfully integrated into ID physicians' educational activities and affect physicians' perspectives on these topics., Competing Interests: Potential conflicts of interest. S. E. G. reports that the Yale School of Medicine Department of Internal Medicine awarded an $5000 educational research grant to the ID2EA committee. This award is to expand the curriculum and work of the committee, and none of the funding goes directly to committee members. B. E. reports consulting fees from and participation on data safety monitoring or advisory board for Theratechnologies (treatment-experienced human immunodeficiency virus [HIV] and HIV and liver disease). M. P. G. reports payment or honoraria from Health Monitor Network for contributing to an article (payment to author) and participation as a data safety monitoring board member for Universidade Federal de Minas Gerais (use of methotrexate for treatment of chikungunya arthritis in Brazil). J. P. M. reports grants or contracts to institution from the National Institute on Drug Abuse, National Institute of Mental Health, National Institute of Allergy and Infectious Diseases, and National Institute on Alcohol Abuse and Alcoholism, National Institutes of Health, the Substance Abuse and Mental Health Services Administration, the Doris Duke Charitable Foundation, and Gilead Science; consulting fees to author from the National Institute on Drug Abuse; payment or honoraria for lectures, presentations, speakers bureaus, manuscript writing, or educational events to author from the Opioid Response Network, the National Institutes of Health grant review, the Doris Duke Charitable Foundation grant review, University of Massachusetts Worcester, and the New England AIDS Education and Training Center; payment for expert testimony to author from Budge and Heipt, Yale Law School, Munger, Tolles & Olson, LLP, Baltimore CDF, Silver Golub & Teitell, and the Lawyers’ Committee for Civil Rights Under Law (John Fowler). J. R. reports an unpaid role as chair of the Advocacy Committee for the History of Science Society. S. V. S. reports that her spouse worked for Merck Pharmaceuticals from 1997 to 2007 and retains stock in a retirement account (no conflict of interest regarding the current work but included for full disclosure). M. V. reports HRSA-22-028 (HIV and aging Special Projects of National Significance grant) from Yale University and the Connecticut Department of Public Health (Ryan White Part B funding) from Yale–New Haven Hospital; personal consulting fees from ViiV Healthcare, Gilead Sciences, and Janssen Pharmaceuticals; personal payment or honoraria for lectures, presentations, speakers bureaus, manuscript writing, or educational events from the CT AIDS Education and Training Center and Northeast AIDS Education and Training Center; support for attending meetings and/or travel from Yale University for the Conference on Retroviruses and Opportunistic Infections and from the CT State Medical Society for American Medical Association national meetings; noncompensated roles as president of the New Haven County Medical Association, a board member for Project Access New Haven, and a council member for the CT State Medical Society; stock or stock options within retirement funds; and other personal financial or nonfinancial interests in Healthline and Guidepoint. M. S. D. reports roles as president and past president of American Committee of Molecular, Cellular, and Immunoparasitology subgroup of the American Society of Tropical Medicine and Hygiene. All other authors report no potential conflicts. All authors have submitted the ICMJE Form for Disclosure of Potential Conflicts of Interest. Conflicts that the editors consider relevant to the content of the manuscript have been disclosed., (© The Author(s) 2023. Published by Oxford University Press on behalf of Infectious Diseases Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2023
- Full Text
- View/download PDF
18. Availability and Accessibility of Live Nonreplicating Smallpox/Mpox Vaccine.
- Author
-
Kahn PA, Ying X, Virata M, Magahis P, Li S, and Mathis WS
- Subjects
- Humans, Smallpox prevention & control, Vaccination, Vaccines, Attenuated supply & distribution, Mpox, Monkeypox prevention & control, Smallpox Vaccine supply & distribution
- Published
- 2023
- Full Text
- View/download PDF
19. Patients' perspectives of medications for addiction treatment in HIV clinics: A qualitative study.
- Author
-
Morford KL, Muvvala SB, Chan PA, Cornman DH, Doernberg M, Porter E, Virata M, Yager JE, Fiellin DA, and Edelman EJ
- Subjects
- Analgesics, Opioid therapeutic use, Humans, Mass Screening, Qualitative Research, HIV Infections drug therapy, Substance-Related Disorders drug therapy
- Abstract
Background: While substance use disorders (SUD) disproportionately impact people with HIV (PWH), HIV clinics inconsistently provide evidence-based medications for addiction treatment (MAT). Patient receptivity to MAT is critical to enhance addiction treatment in these settings. However, we know little from patients about how to best integrate MAT into HIV clinics., Methods: This qualitative study used four focus groups informed by the Promoting Action on Research Implementation in Health Services framework to identify barriers and facilitators to receiving opioid, alcohol, and tobacco use disorder care in HIV clinics. The study population included 28 patients with HIV and SUD receiving care at one of four HIV clinics in the northeastern United States. Focus groups were recorded and transcribed for content analysis. The study also performed a brief survey assessing demographics and behaviors., Results: Focus groups revealed several major themes related to MAT in HIV clinics. Barriers included stigma around MAT, knowledge deficits about available MAT options and the impact of substance use on PWH, concerns about medication side effects, substance use screening without adequate clinician follow-up, and peers who discouraged MAT. Facilitators included recognition of substance use as a threat to overall health, integrated care from HIV clinicians, and support for addiction treatment from peers with lived experience., Conclusions: Efforts to enhance MAT in HIV clinics should include patient education to help them recognize addiction as a chronic disease with available medication treatment options; clinician and staff training to promote integrated, multidisciplinary screening and treatment; and thoughtful inclusion of peers with lived experience., (Copyright © 2022 Elsevier Inc. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
20. Willingness to Be Vaccinated Against COVID-19 Among People With HIV in the United States: Results From a National Survey.
- Author
-
Wickersham JA, Meyer JP, Shenoi S, Altice FL, Barakat LA, Virata M, Olivares M, Maviglia F, Khati A, and Shrestha R
- Abstract
Background: Approximately 215 million Americans have been fully vaccinated for COVID-19, representing over 65% of the total population. People with HIV (PWH) may be more susceptible to COVID-19 infection or severe disease, elevating the importance of COVID-19 vaccination uptake in the population. We report results from a national survey of PWH to evaluate the likelihood of receiving a COVID-19 vaccine., Methods: We conducted an online survey of 1,030 PWH living in the United States between December 6, 2020 and January 8, 2021 to evaluate likelihood of receiving a COVID-19 vaccine., Results: Overall, participants were highly willing to be vaccinated, with 83.8% stating they "strongly agree" (65.7%) or "somewhat agree" (18.1%). Participants' top vaccine-related concerns were side-effects (39.3%), safety (14.7%), and fair/equitable distribution of the vaccine to affected communities (13.6%). Participants were more willing to be vaccinated if they reported receiving an annual influenza vaccination ( p < 0.001), had previously tested positive for ( p = 0.043) COVID-19, had been hospitalized for ( p = 0.027) COVID-19 infection, or had an undetectable HIV viral load ( p = 0.002). Black ( p < 0.001), politically conservative ( p < 0.001), and participants with an annual income of ≤ $19,999 ( p = 0.005) were significantly less willing to be vaccinated for COVID-19., Conclusions: The vast majority of PWH were willing to be vaccinated, though predominantly those who were already engaged in HIV care or directly affected by COVID-19. Findings from this large survey of PWH suggest intensive outreach efforts are needed to support engagement in vaccination programs, particularly among Black and politically conservative PWH., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Wickersham, Meyer, Shenoi, Altice, Barakat, Virata, Olivares, Maviglia, Khati and Shrestha.)
- Published
- 2022
- Full Text
- View/download PDF
21. COVID-19 Vaccine Hesitancy and Associated Factors among People with HIV in the United States: Findings from a National Survey.
- Author
-
Shrestha R, Meyer JP, Shenoi S, Khati A, Altice FL, Mistler C, Aoun-Barakat L, Virata M, Olivares M, and Wickersham JA
- Abstract
Introduction: Scaling up vaccination against COVID-19 is central to controlling the COVID-19 epidemic in the United States. Several vaccines are now approved for the prevention of COVID-19, but public concerns over safety and efficacy have heightened distrust and vaccine hesitancy. This is particularly concerning among people with HIV (PWH) who may be vulnerable to more severe COVID-19 disease. Here, we aimed to identify and understand COVID-19 vaccine hesitancy in a sample of PWH in the U.S. Methods: We conducted a cross-sectional online survey among PWH in the U.S. between 6 December 2020 and 8 January 2021. Measures included demographics, participants’ HIV and health-related attributes, COVID-19 history and experiences, COVID-19 vaccine-related concerns, and standardized measures of attitudes towards COVID-19 vaccines. Multivariate linear regression was used to identify factors associated with vaccine hesitancy in this sample. Results: Among the 1030 respondents, most were male (89.7%), White (66.0%), and identified as gay or lesbian (84.5%). Participants’ mean time living with HIV was 17.0 years (standard deviation (SD) = 11.1). The mean score for vaccine hesitancy was 1.5 (SD = 0.5; range: 1−5); 935 participants (90.8%) had a score greater than 1.0, indicating most participants had some degree of vaccine hesitancy. The final multivariate linear regression showed that greater vaccine hesitancy was associated with being Black (b = 0.149, p = 0.005), single (b = 0.070, p = 0.018), politically conservative (b = 0.157, p = 0.010), “anti-vaxxer” (b = 1.791, p < 0.001), concern about side effects (b = 0.226, p < 0.001), concern about safety (b = 0.260, p < 0.001), and being worried that the vaccine will not be effective (b = 0.169, p = 0.008) and they were being experimented on (b = 0.287, p < 0.001). Participants who were male White (b = −0.093, p = 0.008) and university graduates (b = −0.093, p < 0.001) and had a CD4 count of 200 cells/mm3 (b = −0.082, p = 0.048) and a liberal political orientation (b = −0.131, p < 0.001) were associated with lower vaccine hesitancy. Conclusions: Our findings provide important insights regarding COVID-19 vaccine hesitancy among PWH. Further efforts are required to understand how various social, political, and psychological factors contribute to COVID-19 vaccine hesitancy among key populations.
- Published
- 2022
- Full Text
- View/download PDF
22. Decreased Overall Survival in HIV-associated Non-small-cell Lung Cancer.
- Author
-
Hysell K, Yusuf R, Barakat L, Virata M, Gan G, Deng Y, Perez-Irizarry J, Vega T, Goldberg SB, and Emu B
- Subjects
- Aged, Anti-HIV Agents administration & dosage, Carcinoma, Non-Small-Cell Lung pathology, Cohort Studies, Female, HIV Infections drug therapy, Humans, Kaplan-Meier Estimate, Lung Neoplasms pathology, Male, Middle Aged, Neoplasm Staging, Retrospective Studies, Risk Factors, Survival Rate, Carcinoma, Non-Small-Cell Lung therapy, HIV Infections epidemiology, Lung Neoplasms therapy
- Abstract
Introduction: This study aimed to compare demographics, disease characteristics, and outcomes of patients with HIV-infection with non-small-cell lung cancer (NSCLC) with the general NSCLC population., Patients and Methods: A retrospective cohort study was used to compare the HIV-infected and -uninfected groups. Medical records of all patients who were HIV-positive diagnosed with NSCLC between 2000 and 2016 at Yale New Haven Hospital (New Haven, CT) were reviewed and compared with the general Yale NSCLC population regarding demographics, NSCLC characteristics, treatment, and survival. Log-rank tests and Kaplan-Meier curves were used to analyze survival differences. Unadjusted and adjusted Cox proportional hazard models were used to assess predictors of survival., Results: Thirty-five patients with HIV-NSCLC and 5187 general patients with NSCLC were identified. The median age at cancer diagnosis was 54 years (interquartile range [IQR], 49-59 years) for patients with HIV-NSCLC versus 68 years (IQR, 61-76 years) for patients with NSCLC (P < .001). Both groups had high rates of tobacco use. At the time of NSCLC diagnosis, 80% of patients with HIV-NSCLC were on antiretroviral therapy, 60% had an HIV-1 RNA < 400 copies/mL, and their median CD4 was 407 cells/μL (IQR, 218-592 cells/μL). Histology, cancer stage, and first-line cancer treatment regimens were not significantly different between groups. The overall median survival was 12.4 months (95% confidence interval [CI], 7.2-20.4 months) for patients with HIV-NSCLC versus 22.8 months (95% CI, 21.2-24.1 months) for general patients with NSCLC. Patients with HIV-NSCLC had decreased survival at 2 years (P = .028) and 3 years (P = .014) compared with general patients with NSCLC. HIV status was an independent risk factor for poorer outcomes when controlling for other factors (hazard ratio, 1.8; 95% CI, 1.24-2.62)., Conclusion: Despite similar histology, stage, and treatment between groups, patients with HIV had worse outcomes for NSCLC., (Copyright © 2020 Elsevier Inc. All rights reserved.)
- Published
- 2021
- Full Text
- View/download PDF
23. Efficacy of Extended-Release Naltrexone on HIV-Related and Drinking Outcomes Among HIV-Positive Patients: A Randomized-Controlled Trial.
- Author
-
Edelman EJ, Moore BA, Holt SR, Hansen N, Kyriakides TC, Virata M, Brown ST, Justice AC, Bryant KJ, Fiellin DA, and Fiellin LE
- Subjects
- Adult, Alcohol Drinking, CD4 Lymphocyte Count, Counseling, Delayed-Action Preparations, Double-Blind Method, Female, HIV, HIV Infections blood, Humans, Injections, Intramuscular, Male, Middle Aged, Treatment Outcome, Alcoholism drug therapy, Anti-Retroviral Agents therapeutic use, HIV Infections drug therapy, Naltrexone therapeutic use, Narcotic Antagonists therapeutic use, Assessment of Medication Adherence
- Abstract
We sought to test the efficacy of extended-release naltrexone (XR-NTX) on HIV-related and drinking outcomes. From April 2011-February 2015, we conducted a 4-site randomized double-blind placebo controlled clinical trial involving 51 HIV-positive patients with heavy drinking and < 95% antiretroviral (ART) adherence. All participants received counseling. The primary outcome was proportion with ≥ 95% ART adherence. Secondary outcomes included HIV biomarkers, VACS Index score, and past 30-day heavy drinking days. Based on receipt of ≥ 5 injections, 23 participants were retained at 24 weeks. We did not detect an effect of XR-NTX on ART adherence (p = 0.38); undetectable HIV viral load (p = 0.26); CD4 cell count (p = 0.75) or VACS Index score (p = 0.70). XR-NTX was associated with fewer heavy drinking days (p = 0.03). While XR-NTX decreases heavy drinking days, we did not detect improvements in ART adherence or HIV outcomes. Strategies to improve retention in alcohol treatment and HIV-related outcomes among heavy drinking HIV-positive patients are needed.
- Published
- 2019
- Full Text
- View/download PDF
24. Efficacy of an 8-week course of sofosbuvir and ledipasvir for the treatment of HCV infection in selected HIV-infected patients.
- Author
-
Ogbuagu O, Hao R, Virata M, Villanueva MS, and Malinis M
- Abstract
Background: With the availability of direct acting antiviral treatment for hepatitis C (HCV), HIV and HCV co-infected patients show comparable treatment responses to HCV-monoinfected patients. An 8-week course of sofosbuvir/ledipasvir (SOF/LDV) is highly effective for the treatment of HCV genotype 1 infection in treatment-naïve mono-infected patients with HCV viral loads <6 million IU/ml. There is limited data on the efficacy of this 8-week HCV treatment regimen in HIV-infected individuals with similar viral loads. Methods : The study was a retrospective review of HIV-infected adults coinfected with HCV genotype 1 for whom an 8-week course of SOF/LDV was prescribed by providers at two clinics in the Yale-New Haven health system from November 1, 2014 until April 30, 2016. Treatment efficacy was assessed as the proportion of treatment initiators who achieved a sustained virologic response 12 weeks after completion of therapy (SVR 12). Results: Nineteen patients met study eligibility criteria and included 14 men (74%); and 12 African-Americans (63%). All patients were on antiretroviral therapy with fully suppressed HIV viral loads and were HCV treatment-naïve. All patients had pre-treatment HCV viral loads <6 million IU/mL. Eighteen patients (95%) completed HCV treatment. Overall, SVR 12 was 95%, with 1 treament failure occurring due to suboptimal adherence. Conclusion : Among our HIV-infected patient cohort with HCV genotype 1 infection, 95% of those treated with an 8 week course of SOF/LDV achieved SVR 12. This is comparable to the efficacy of the same treatment regimen in patients without HIV infection. This study lends proof of concept to the use of shorter course SOF/LDV treatment for HIV-HCV genotype 1 coinfected patients with viral loads <6 million IU/ml. Larger studies are indicated to validate our findings., Competing Interests: Competing interests: No competing interests were disclosed.
- Published
- 2017
- Full Text
- View/download PDF
25. Prevalence of Metabolic Syndrome in Patients with HIV in the Era of Highly Active Antiretroviral Therapy.
- Author
-
Lombo B, Alkhalil I, Golden MP, Fotjadhi I, Ravi S, Virata M, Lievano M, Diez J, Ghantous A, and Donohue T
- Subjects
- Adult, Antiretroviral Therapy, Highly Active, Comorbidity, Cross-Sectional Studies, Female, HIV Infections drug therapy, Humans, Male, Middle Aged, Obesity epidemiology, Prevalence, Retrospective Studies, Risk Factors, HIV Infections epidemiology, Metabolic Syndrome epidemiology
- Abstract
Objectives: Since the introduction of combination antiretroviral therapy (cART) as the standard of care for HIV disease, there has been a precipitous decline in the death rate due to HIV/ AIDS. The purpose of this study was to report the prevalence of metabolic syndrome in HIV infected patients., Methods: Retrospective, cross-sectional, observational study of 259 patients with HIV infection treated with cART from an urban community hospital. Metabolic syndrome prevalence was defined using the International Diabetes Federation (IDF) and the U.S. National Cholesterol Education Program Adult Treatment Panel III (ATP III) criteria. Study patients were included regardless of the duration of cART., Results: The prevalence of metabolic syndrome was 27% using IDF criteria and 26% using ATP III criteria. Logistic regression analysis found an association between treatment with the protease inhibitor darunavir and metabolic syndrome. (OR 3.32 with 95% confidence interval between 1.54 and 7.15)., Conclusion: There is a high prevalence of metabolic syndrome and obesity in HIV patients treated with cART, especially those taking the protease inhibitor darunavir.
- Published
- 2015
26. Vanishing bile duct syndrome in a HIV patient on HAART therapy.
- Author
-
Gnanaraj J, Fiedler P, and Virata M
- Subjects
- Adult, Diagnosis, Differential, Humans, Male, Antiretroviral Therapy, Highly Active adverse effects, Bile Duct Diseases chemically induced, Bile Duct Diseases diagnosis, HIV Infections drug therapy
- Abstract
Vanishing bile duct syndrome refers to a group of disorders characterised by progressive destruction of the intrahepatic bile ducts resulting in cholestasis. It is a final common pathway for many disorders. The diagnoses is mainly made by histological findings. To consider a diagnosis there should be loss of interlobular bile ducts in more than fifty per cent of small portal tracts provided that the specimen contains at least 10 portal tracts. Here the authors present a case of vanishing bile duct syndrome which developed after initiation of highly active antiretroviral treatment therapy.
- Published
- 2011
- Full Text
- View/download PDF
27. Computational identification of Ciona intestinalis microRNAs.
- Author
-
Keshavan R, Virata M, Keshavan A, and Zeller RW
- Subjects
- Animals, Base Sequence, Microarray Analysis, Molecular Sequence Data, Nucleic Acid Conformation, Ciona intestinalis genetics, Ciona intestinalis metabolism, Computational Biology, MicroRNAs genetics, MicroRNAs metabolism
- Abstract
MicroRNAs (miRNAs) are conserved non-coding small RNAs with potent post-transcriptional gene regulatory functions. Recent computational approaches and sequencing of small RNAs had indicated the existence of about 80 Ciona intestinalis miRNAs, although it was not clear whether other miRNA genes were present in the genome. We undertook an alternative computational approach to look for Ciona miRNAs. Conserved non-coding sequences from the C. intestinalis genome were extracted and computationally folded to identify putative hairpin-like structures. After applying additional criteria, we obtained 458 miRNA candidates whose sequences were used to design a custom microarray. Over 100 of our predicted hairpins were identified in this array when probed with RNA from various Ciona stages. We also compared our predictions to recently deposited sequences of Ciona small RNAs and report that 170 of our predicted hairpins are represented in this data set. Altogether, about 250 of our 458 predicted miRNAs were represented in either our array data or the small-RNA sequence database. These results suggest that Ciona has a large number of genomically encoded miRNAs that play an important role in modulating gene activity in developing embryos and adults.
- Published
- 2010
- Full Text
- View/download PDF
28. International collaborative study to establish immunoglobulin (anti-D test) BRP batch 1.
- Author
-
Thorpe SJ, Fox B, Heath A, Behr-Gross ME, Virata ML, and Yu MW
- Subjects
- Europe, Hemagglutination Tests standards, Humans, Immunoglobulins, Intravenous chemistry, Immunoglobulins, Intravenous isolation & purification, International Cooperation, Reference Standards, United States, World Health Organization, Immunoglobulins, Intravenous standards, Pharmacopoeias as Topic, Rho(D) Immune Globulin chemistry, United States Food and Drug Administration
- Abstract
An international collaborative study was organised to establish a European Pharmacopoeia (Ph. Eur.) Biological Reference Preparation (BRP) and United States (US) Food and Drug Administration (FDA) reference preparation for the test for anti-D (anti-Rho) antibodies in human normal immunoglobulin for intravenous administration (IGIV). A candidate positive control (IGIV+anti-D) and negative control IGIV were compared to corresponding World Health Organization (WHO) International Reference Reagents using a direct haemagglutination reference method. Sixteen (16) laboratories participated in the collaborative study. Further to completion of the study, the materials assayed in the study were granted the status of Ph. Eur. and US FDA reference preparations for controlling the levels of anti-D in IGIV.
- Published
- 2006
29. Suspected Brazilian purpuric fever in a toddler with overwhelming Epstein-Barr virus infection.
- Author
-
Virata M, Rosenstein NE, Hadler JL, Barrett NL, Tondella ML, Mayer LW, Weyant RS, Hill B, and Perkins BA
- Subjects
- Bacteremia microbiology, Bacterial Typing Techniques, Fatal Outcome, Haemophilus Infections microbiology, Haemophilus influenzae isolation & purification, Herpesviridae Infections virology, Humans, Infant, Male, Haemophilus Infections complications, Haemophilus influenzae classification, Herpesviridae Infections complications, Herpesvirus 4, Human isolation & purification, Purpura complications
- Abstract
We describe a toddler from Connecticut who developed purulent conjunctivitis, fever, and a morbilliform rash. Blood cultures were positive for Haemophilus influenzae biogroup aegyptius; further investigation was performed to assess the possibility that the illness was consistent with Brazilian purpuric fever, which, to our knowledge, has not been reported in the United States. This isolate shared morphological and some biochemical characteristics with previously studied H. influenzae biogroup aegyptius strains but differed according to slide agglutination testing, plasmid characterization, and ribotyping. Blood and tissue samples obtained during his hospitalization were also positive for Epstein-Barr virus. The child died 8 days after hospitalization. Fifty other cases of invasive H. influenzae infection were identified by active surveillance studies. Of the 49 viable surveillance isolates, 10 were biotype III (two of which had the same ribotype as the strain from our case.
- Published
- 1998
- Full Text
- View/download PDF
30. Structure and function of desmosomal transmembrane core and plaque molecules.
- Author
-
Kowalczyk AP, Stappenbeck TS, Parry DA, Palka HL, Virata ML, Bornslaeger EA, Nilles LA, and Green KJ
- Subjects
- Animals, Cadherins genetics, Cadherins physiology, Cattle, Cell Adhesion physiology, Cell Communication physiology, Cell Membrane physiology, Cell Membrane ultrastructure, DNA, Complementary analysis, Desmocollins, Desmoglein 1, Desmogleins, Desmoplakins, Gap Junctions physiology, L Cells, Membrane Proteins physiology, Membrane Proteins ultrastructure, Mice, Structure-Activity Relationship, Cytoskeletal Proteins physiology, Cytoskeletal Proteins ultrastructure, Desmosomes physiology, Desmosomes ultrastructure
- Abstract
Desmosomes are intercellular junctions that function in cell-cell adhesion and attachment of intermediate filaments (IF) to the cell surface. Desmogleins and desmocollins are the major components of the transmembrane adhesion complex, whereas desmoplakins (DPs) are the most prominent components of the cytoplasmic plaque. Based on sequence similarity, desmogleins and desmocollins are related to the calcium-dependent homophilic adhesion molecules known as cadherins. Like the classical cadherins, the desmosomal cadherins contain four homologous extracellular domains bearing putative calcium-binding sites, a single transmembrane spanning domain, and a C-terminal cytoplasmic tail. Molecules in the desmoglein subclass contain a unique C-terminal extension within which is found a repeating motif that is predicted to form two beta-strands and two turns. Stable cell lines expressing desmoglein 1 have been generated from normally non-adherent L cell fibroblasts, to study the contribution of this cadherin to desmosomal adhesion. The predicted sequence of desmoplakin (DP) I suggests it will form homodimers comprising a central alpha-helical coiled-coil rod and two globular end domains. The C-terminus contains three regions with significant homology, each of which is made up of a 38-residue motif also found in two other molecules involved in organization of IF, bullous pemphigoid antigen and plectin. Ectopically expressed polypeptides including the C-terminus of DP I specifically align with keratin and vimentin IF in cultured cells, whereas those lacking this domain do not align with IF. The last 68 amino acids of DP are required for alignment along keratin but not vimentin IF, and residues 48-68 from the C-terminal end are critical for this interaction. These results suggest that the C-terminus of DP plays a role in the attachment of IF to the desmosome and that a specific site is necessary for interaction with keratin IF. A sequence at the most N-terminal end of DP appears to be required for efficient incorporation into the desmosomal plaque. Interestingly, this region has not been reported to be present in the homologous bullous pemphigoid antigen or plectin molecules and may represent a desmosomal targeting sequence.
- Published
- 1994
- Full Text
- View/download PDF
31. Comparative structural analysis of desmoplakin, bullous pemphigoid antigen and plectin: members of a new gene family involved in organization of intermediate filaments.
- Author
-
Green KJ, Virata ML, Elgart GW, Stanley JR, and Parry DA
- Subjects
- Amino Acid Sequence, Autoantigens genetics, Consensus Sequence, Cytoskeletal Proteins genetics, Desmoplakins, Desmosomes, Dystonin, Humans, Intercellular Junctions, Intermediate Filament Proteins genetics, Molecular Sequence Data, Molecular Structure, Plectin, Protein Conformation, Sequence Homology, Software, Collagen Type XVII, Autoantigens chemistry, Carrier Proteins, Collagen, Cytoskeletal Proteins chemistry, Intermediate Filament Proteins chemistry, Intermediate Filaments ultrastructure, Multigene Family, Nerve Tissue Proteins, Non-Fibrillar Collagens
- Abstract
Desmoplakins (DP) and bullous pemphigoid antigen (BPA) are major plaque components of the desmosome and hemidesmosome, respectively. These cell adhesion structures are both associated intimately with the intermediate filament (IF) network. Structural analyses of DP and BPA sequences have indicated that these molecules are likely to form extended dumbbell-shaped dimers with a central rod and globular end domains. Recent sequence data have indicated that the N-terminal domains of both DP and BPA (like their C-terminal domains) are highly related: the former contain regions of heptad repeats that are predicted to form several alpha-helical bundles. Comparisons of DP and BPA protein sequences with that of plectin (PL), a 466 kDa IF-associated protein, have also revealed large scale homology. Identities between their N-terminal domains are: DP:BPA = 35%, DP:PL = 32%, BPA:PL = 40%, suggesting that BPA is more closely related to PL than DP in this region. In the C-terminal domains, which contain a 38-residue repeating motif, however, DP and PL are closer relatives (identities: DP:BPA = 38%, BPA:PL = 40%, DP:PL = 49%). The central domains of all three proteins have extensive heptad repeat substructure, express the same periodic distribution of charged residues, and are predicted to form two-stranded alpha-helical coiled-coil ropes. These observations suggest that DP, BPA and PL belong to a new gene family encoding proteins involved in IF organization.
- Published
- 1992
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.