7 results on '"Viudes S"'
Search Results
2. Genome wide association study of Arabidopsis seed mucilage layers at a regional scale.
- Author
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Viudes S, Zamar R, Burlat V, Roux F, and Dunand C
- Subjects
- Genome-Wide Association Study, Bayes Theorem, Mutation, Polysaccharides metabolism, Seeds genetics, Seeds metabolism, Arabidopsis genetics, Arabidopsis metabolism, Arabidopsis Proteins genetics, Arabidopsis Proteins metabolism, Plant Mucilage genetics, Plant Mucilage metabolism
- Abstract
The myxospermous species Arabidopsis thaliana extrudes a polysaccharidic mucilage from the seed coat epidermis during imbibition. The whole seed mucilage can be divided into a seed-adherent layer and a fully soluble layer, both layers presenting natural genetic variations. The adherent mucilage is variable in size and composition, while the soluble mucilage is variable in composition and physical properties. Studies reporting both the genetic architecture and the putative selective agents acting on this natural genetic variation are scarce. In this study, we set up a Genome Wide Association study (GWAS) based on 424 natural accessions collected from 166 natural populations of A. thaliana located south-west of France and previously characterized for a very important number of abiotic and biotic factors. We identified an extensive genetic variation for both mucilage layers. The adherent mucilage was mainly related to precipitation and temperature whereas the non-adherent mucilage was unrelated to any environmental factors. By combining a hierarchical Bayesian model with a local score approach, we identified 55 and 28 candidate genes, corresponding to 26 and 10 QTLs for the adherent and non-adherent mucilages, respectively. Putative or characterized function and expression data available in the literature were used to filter the candidate genes. Only one gene among our set of candidate genes was already described as a seed mucilage actor, leaving a large set of new candidates putatively implicated inseed mucilage synthesis or release. The present study lay out foundation to understand the influence of regional ecological factors acting on seed mucilage in A. thaliana., Competing Interests: Declaration of competing interest There is no competing interest., (Copyright © 2024. Published by Elsevier Masson SAS.)
- Published
- 2024
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3. Myxospermy Evolution in Brassicaceae: A Highly Complex and Diverse Trait with Arabidopsis as an Uncommon Model.
- Author
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Viudes S, Dunand C, and Burlat V
- Subjects
- Arabidopsis genetics, Arabidopsis growth & development, Brassicaceae genetics, Brassicaceae growth & development, Cell Wall, Gene Expression Regulation, Plant, Genome, Plant, Phylogeny, Plant Proteins genetics, Seeds genetics, Seeds growth & development, Transcriptome, Arabidopsis chemistry, Biological Evolution, Brassicaceae chemistry, Plant Mucilage chemistry, Plant Proteins metabolism, Seeds chemistry
- Abstract
The ability to extrude mucilage upon seed imbibition (myxospermy) occurs in several Angiosperm taxonomic groups, but its ancestral nature or evolutionary convergence origin remains misunderstood. We investigated seed mucilage evolution in the Brassicaceae family with comparison to the knowledge accumulated in Arabidopsis thaliana . The myxospermy occurrence was evaluated in 27 Brassicaceae species. Phenotyping included mucilage secretory cell morphology and topochemistry to highlight subtle myxospermy traits. In parallel, computational biology was driven on the one hundred genes constituting the so-called A. thaliana mucilage secretory cell toolbox to confront their sequence conservation to the observed phenotypes. Mucilage secretory cells show high morphology diversity; the three studied Arabidopsis species had a specific extrusion modality compared to the other studied Brassicaceae species. Orthologous genes from the A. thaliana mucilage secretory cell toolbox were mostly found in all studied species without correlation with the occurrence of myxospermy or even more sub-cellular traits. Seed mucilage may be an ancestral feature of the Brassicaceae family. It consists of highly diverse subtle traits, probably underlined by several genes not yet characterized in A. thaliana or by species-specific genes. Therefore, A. thaliana is probably not a sufficient reference for future myxospermy evo-devo studies.
- Published
- 2021
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- View/download PDF
4. Seed mucilage evolution: Diverse molecular mechanisms generate versatile ecological functions for particular environments.
- Author
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Viudes S, Burlat V, and Dunand C
- Subjects
- Adaptation, Physiological physiology, Ecology, Environment, Plant Mucilage metabolism, Seeds metabolism, Stress, Physiological physiology, Biological Evolution, Plant Mucilage physiology, Seeds physiology
- Abstract
Plant myxodiasporous species have the ability to release a polysaccharidic mucilage upon imbibition of the seed (myxospermy) or the fruit (myxocarpy). This is a widespread capacity in angiosperms providing multiple ecological functions including higher germination efficiency under environmental stresses. It is unclear whether myxodiaspory has one or multiple evolutionary origins and why it was supposedly lost in several species. Here, we summarize recent advances on three main aspects of myxodiaspory. (a) It represents a combination of highly diverse traits at different levels of observation, ranging from the dual tissular origin of mucilage secretory cells to diverse mucilage polysaccharidic composition and ultrastructural organization. (b) An asymmetrical selection pressure is exerted on myxospermy-related genes that were first identified in Arabidopsis thaliana. The A. thaliana and the flax intra-species mucilage variants show that myxospermy is a fast-evolving trait due to high polymorphism in a few genes directly acting on mucilage establishment. In A. thaliana, these actors are downstream of a master regulatory complex and an original phylogenetic overview provided here illustrates that this complex has sequentially evolved after the common ancestor of seed plants and was fully established in the common ancestor of the rosid clade. (c) Newly identified myxodiaspory ecological functions indicate new perspectives such as soil microorganism control and plant establishment support., (© 2020 John Wiley & Sons Ltd.)
- Published
- 2020
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5. Analysis of durum wheat proteome changes under marine and fungal biostimulant treatments using large-scale quantitative proteomics: A useful dataset of durum wheat proteins.
- Author
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Pichereaux C, Laurent EA, Gargaros A, Viudes S, Durieu C, Lamaze T, Grieu P, and Burlet-Schiltz O
- Subjects
- Databases, Protein, Plant Proteins metabolism, Proteome metabolism, Proteomics, Triticum metabolism
- Abstract
Durum wheat requires high nitrogen inputs to obtain the high protein concentration necessary to satisfy pasta and semolina quality criteria. Optimizing plant nitrogen use efficiency is therefore of major importance for wheat grain quality. Here, we studied the impact on grain yield, protein concentration, and for the first time on protein composition of a marine (DPI4913) and a fungal (AF086) biostimulants applied to plant leaves. A large-scale quantitative proteomics analysis of wheat flour samples led to a dataset of 1471 identified proteins. Quantitative analysis of 1391 proteins revealed 26 and 38 proteins with a significantly varying abundance after DPI4913 and AF086 treatment, respectively, with 14 proteins in common. Major effects affected proteins involved in grain technological properties like grain hardness, in storage functions with the gluten protein gamma-gliadin, in regulation processes with transcription regulator proteins, and in stress responses with biotic and abiotic stress defense proteins. The involvement of biostimulants in the abiotic stress response was further suggested by an increase in water-use efficiency for both DPI4913 (15.4%) and AF086 (9.9%) treatments. Overall, our work performed in controlled conditions showed that DPI4913 and AF086 treatments promoted grain yield while maintaining protein concentration, and positively affected protein composition for grain quality. Data are available via ProteomeXchange with identifier PXD012469., (Copyright © 2019. Published by Elsevier B.V.)
- Published
- 2019
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6. Phenotypic Trait Variation as a Response to Altitude-Related Constraints in Arabidopsis Populations.
- Author
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Duruflé H, Ranocha P, Mbadinga Mbadinga DL, Déjean S, Bonhomme M, San Clemente H, Viudes S, Eljebbawi A, Delorme-Hinoux V, Sáez-Vásquez J, Reichheld JP, Escaravage N, Burrus M, and Dunand C
- Abstract
Natural variations help in identifying genetic mechanisms of morphologically and developmentally complex traits. Mountainous habitats provide an altitudinal gradient where one species encounters different abiotic conditions. We report the study of 341 individuals of Arabidopsis thaliana derived from 30 natural populations not belonging to the 1001 genomes, collected at increasing altitudes, between 200 and 1800 m in the Pyrenees. Class III peroxidases and ribosomal RNA sequences were used as markers to determine the putative genetic relationships among these populations along their altitudinal gradient. Using Bayesian-based statistics and phylogenetic analyses, these Pyrenean populations appear with significant divergence from the other regional accessions from 1001 genome (i.e., from north Spain or south France). Individuals of these populations exhibited varying phenotypic changes, when grown at sub-optimal temperature (22 vs. 15°C). These phenotypic variations under controlled conditions reflected intraspecific morphological variations. This study could bring new information regarding the west European population structure of A. thaliana and its phenotypic variations at different temperatures. The integrative analysis combining genetic, phenotypic variation and environmental datasets is used to analyze the acclimation of population in response to temperature changes. Regarding their geographical proximity and environmental diversity, these populations represent a tool of choice for studying plant response to temperature variation., Highlights: -Studying the natural diversity of A. thaliana in the Pyrenees mountains helps to understand European population structure and to evaluate the phenotypic trait variation in response to climate change.
- Published
- 2019
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7. [Situation analysis and proposals for improving primary care nursing in Mallorca: study with focal groups].
- Author
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Sancho Viudes S, Vidal Thomàs C, Cañellas Pons R, Caldés Pinilla MJ, Corcoll Reixach J, and Ramos Montserrat M
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- Health Care Reform, Humans, Nurse's Role, Qualitative Research, Spain, Focus Groups, Primary Nursing standards, Quality Assurance, Health Care
- Abstract
Background: The primary care reform (PCR) has give rise to some major changes in the nursing profession. The objectives of this study are to analyze the achievements made by the nurses, to identify the problems they currently have in primary care and to suggest some lines along which work can be done for the future., Method: Qualitative research (focal group method). Eight groups were made segmented by occupational category and the position held. Scope of the analysis: the role of nurses, services supply and organization, participation and management, marketing and training., Results: In the opinion of those surveyed, the PCR has entailed a broadening of the nurses' skills, although their role is still well-defined. The nurses are of the opinion that there is no listing of services inherent to nursing despite the leading role they obviously play in home care and health education. The need has been identified of assess the existing health programs in terms of results. Concerning to health services organization, main problems were related to the lack of adapting staffing in keeping with the rise in population and difficulties of internal communications within the health professional teams and the very small degree to which nursing services are disseminated. The need is felt of broadening pre-diploma training with regard to some subjects (health education) and skills (teamwork)., Conclusions: Although the PCR has meant improvements for the nurses, solutions have as yet to have been provided to some aspects (including defining a listing of services, adapting staffing, internal communications, marketing, training) and given the opportunity the transferring of authorities over health care entail, further progress must be made toward innovative proposals to improve the health services.
- Published
- 2002
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