1,664 results on '"WHITEHEAD, A. J."'
Search Results
2. Helix-fixed leadless pacemaker implantation through a valve-in-valve tricuspid prosthesis via the femoral approach
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Steinberg, Benjamin A., Tandar, Anwar, and Whitehead, Kevin J.
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- 2024
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3. Growth Fault–Induced Effects on Tidal Marsh Surficial Processes and Landscape Conversion in the Slop Bowl, Brazoria National Wildlife Refuge, Texas
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Whitehead, Samuel J., Yeager, Kevin M., Feagin, Rusty A., Huff, Thomas P., Paine, Jeffrey G., Schindler, Kimberly J., and Dixon, Timothy S.
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- 2024
4. Conductive electrospun polymer improves stem cell-derived cardiomyocyte function and maturation
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Gonzalez, Gisselle, Nelson, Aileena C, Holman, Alyssa R, Whitehead, Alexander J, LaMontagne, Erin, Lian, Rachel, Vatsyayan, Ritwik, Dayeh, Shadi A, and Engler, Adam J
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Engineering ,Biomedical Engineering ,Stem Cell Research - Embryonic - Human ,Stem Cell Research ,Cardiovascular ,Heart Disease ,Stem Cell Research - Induced Pluripotent Stem Cell - Human ,Stem Cell Research - Induced Pluripotent Stem Cell ,Regenerative Medicine ,5.2 Cellular and gene therapies ,Humans ,Myocytes ,Cardiac ,Polymers ,Pluripotent Stem Cells ,Cell Line ,Cell Differentiation ,Electric Conductivity ,sulfonate ,poly(vinyl) alcohol ,Desmoplakin ,Sarcomere organization ,Calcium handling ,FluoVolt ,poly(3 ,4-ethylenedioxythiophene):polystyrene ,poly(3 ,4-ethylenedioxythiophene):polystyrene sulfonate - Abstract
Despite numerous efforts to generate mature human pluripotent stem cell-derived cardiomyocytes (hPSC-CMs), cells often remain immature, electrically isolated, and may not reflect adult biology. Conductive polymers are attractive candidates to facilitate electrical communication between hPSC-CMs, especially at sub-confluent cell densities or diseased cells lacking cell-cell junctions. Here we electrospun conductive polymers to create a conductive fiber mesh and assess if electrical signal propagation is improved in hPSC-CMs seeded on the mesh network. Matrix characterization indicated fiber structure remained stable over weeks in buffer, scaffold stiffness remained near in vivo cardiac stiffness, and electrical conductivity scaled with conductive polymer concentration. Cells remained adherent and viable on the scaffolds for at least 5 days. Transcriptomic profiling of hPSC-CMs cultured on conductive substrates for 3 days showed upregulation of cardiac and muscle-related genes versus non-conductive fibers. Structural proteins were more organized and calcium handling was improved on conductive substrates, even at sub-confluent cell densities; prolonged culture on conductive scaffolds improved membrane depolarization compared to non-conductive substrates. Taken together, these data suggest that blended, conductive scaffolds are stable, supportive of electrical coupling in hPSC-CMs, and promote maturation, which may improve our ability to model cardiac diseases and develop targeted therapies.
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- 2023
5. Bathing Adaptations in the Homes of Older Adults (BATH-OUT-2): study protocol for a randomised controlled trial, economic evaluation and process evaluation
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Whitehead, Phillip J., Belshaw, Stuart, Brady, Samantha, Coleman, Elizabeth, Dean, Alexandra, Doherty, Laura, Fairhurst, Caroline, Francis-Farrell, Sandra, Golding-Day, Miriam, Gray, Joanne, Martland, Maisie, McAnuff, Jennifer, McCarthy, Andrew, McMeekin, Peter, Mitchell, Natasha, Narayanasamy, Melanie, Newman, Craig, Parker, Adwoa, Rapley, Tim, Rodgers, Sara, Rooney, Leigh, Russell, Rachel, Sheard, Laura, and Torgerson, David
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- 2024
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- View/download PDF
6. Comparing Characteristics and Treatment of Brain Vascular Malformations in Children and Adults with HHT
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Kilian, Alexandra, Latino, Giuseppe A, White, Andrew J, Ratjen, Felix, McDonald, Jamie, Whitehead, Kevin J, Gossage, James R, Krings, Timo, Lawton, Michael T, Kim, Helen, Faughnan, Marie E, and Group, The Brain Vascular Malformation Consortium HHT Investigator
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Biomedical and Clinical Sciences ,Clinical Sciences ,Pediatric Research Initiative ,Hematology ,Congenital Structural Anomalies ,Rare Diseases ,Orphan Drug ,Prevention ,Pediatric ,Clinical Research ,Brain Disorders ,Neurosciences ,hereditary hemorrhagic telangiectasia ,pediatrics ,brain vascular malformation ,embolization ,gamma knife ,surgery ,intracranial hemorrhage ,screening ,Biomedical and clinical sciences - Abstract
Hereditary hemorrhagic telangiectasia (HHT) is a rare autosomal dominant disease characterized by the development of vascular malformations (VMs) in organs such as the brain and lungs, as well as telangiectases on mucosal surfaces. Prophylactic treatment of organ VMs may prevent potential complications, such as hemorrhage. However, brain VM treatment-surgical resection, embolization, and/or radiosurgery-is not recommended for all patients due to the associated risks. Given the scarcity of data regarding HHT-related brain VM presentation and treatment trends in pediatric patients, we aim to describe the clinical presentations and the patterns of treatment of HHT-related brain VMs in a pediatric cohort, and compare pediatric trends to those of adults. Demographic and clinical data were analyzed in 114 pediatric patients with HHT-related brain VMs and compared with a cohort of 253 adult patients enrolled in the multicenter Brain Vascular Malformation Consortium HHT Project. Our data demonstrated that a higher proportion of pediatric patients with HHT-related brain VMs were symptomatic at presentation (p = 0.004). Moreover, a higher proportion of pediatric patients presented with intracranial hemorrhage (p < 0.001) and seizure (p = 0.002) compared to adult patients. Surgical resection was the most common brain VM treatment modality in both children and adults. We conclude that pediatric patients may be more likely to present with symptoms and complications from brain VMs, supporting the case for screening for brain VMs in children with HHT.
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- 2023
7. Age-dependent Lamin changes induce cardiac dysfunction via dysregulation of cardiac transcriptional programs
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Kirkland, Natalie J, Skalak, Scott H, Whitehead, Alexander J, Hocker, James D, Beri, Pranjali, Vogler, Geo, Hum, Bill, Wang, Mingyi, Lakatta, Edward G, Ren, Bing, Bodmer, Rolf, and Engler, Adam J
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Medical Physiology ,Biomedical and Clinical Sciences ,Cardiovascular ,Genetics ,Heart Disease ,Aging ,2.1 Biological and endogenous factors ,Aetiology ,Underpinning research ,1.1 Normal biological development and functioning ,Mice ,Animals ,Cell Nucleus ,Myocytes ,Cardiac ,Chromatin ,Heart Diseases ,Transcription Factors ,Mammals ,Clinical sciences - Abstract
As we age, structural changes contribute to progressive decline in organ function, which in the heart act through poorly characterized mechanisms. Taking advantage of the short lifespan and conserved cardiac proteome of the fruit fly, we found that cardiomyocytes exhibit progressive loss of Lamin C (mammalian Lamin A/C homologue) with age, coincident with decreasing nuclear size and increasing nuclear stiffness. Premature genetic reduction of Lamin C phenocopies aging's effects on the nucleus, and subsequently decreases heart contractility and sarcomere organization. Surprisingly, Lamin C reduction downregulates myogenic transcription factors and cytoskeletal regulators, possibly via reduced chromatin accessibility. Subsequently, we find a role for cardiac transcription factors in regulating adult heart contractility and show that maintenance of Lamin C, and cardiac transcription factor expression, prevents age-dependent cardiac decline. Our findings are conserved in aged non-human primates and mice, demonstrating that age-dependent nuclear remodeling is a major mechanism contributing to cardiac dysfunction.
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- 2023
8. Allied Health Clinical Placements with a Remote Supervision Model: Students' and Clinical Educators' Perceptions
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Whitehead, Andrea J., Beak, Kelly. M., Russell, Trevor, and Ross, Megan H.
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COVID-19 restrictions prompted change to clinical placements for students, including a move to a remote supervision model where students, clinical educators, and patients were geographically remote from each other but connected via videoconferencing technology. A total of seven students and 11 clinical educators from occupational therapy and speech pathology participated in focus groups, reflecting on their experiences and perceptions of the rapid transition to remote supervision. Qualitative data were analyzed using a thematic analysis approach. No participants had experience with remote supervision prior to COVID-19. Three key themes were generated from the data: (a) key considerations, processes, and suggestions for remote supervision, (b) impact of remote supervision on relationship development, and (c) development of student professional competencies within the model. This study provides insights and practical considerations for implementing remote supervision and confirms this model can effectively meet students' supervision needs and support the development of professional competencies.
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- 2023
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9. De Novo Brain Vascular Malformations in Hereditary Hemorrhagic Telangiectasia
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Atherton, Mary E., Chakinala, Murali M., Clancy, Marianne S., Faughnan, Marie E., Gossage, James R., Hammill, Adrienne M., Henderson, Katharine, Hetts, Steven, Hountras, Peter, Iyer, Vivek, Kasthuri, Raj S., Kim, Helen, Krings, Timo, Lawton, Michael T., Lin, Doris, Mager, Johannes Jurgen, Marchuk, Douglas A., McWilliams, Justin P., McDonald, Jamie, Pawlikowska, Ludmila, Pollak, Jeffrey, Ratjen, Felix, Swanson, Karen, Vethanayagam, Dilini, Weinsheimer, Shantel, White, Andrew J., Whitehead, Kevin J., Wilcox, Pearce, Beslow, Lauren A., Hetts, Steven W., McCulloch, Charles E., Clancy, Marianne, and Bagheri, Negar
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- 2024
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10. Improved epicardial cardiac fibroblast generation from iPSCs
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Whitehead, Alexander J, Hocker, James D, Ren, Bing, and Engler, Adam J
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Biochemistry and Cell Biology ,Biological Sciences ,Stem Cell Research ,Cardiovascular ,Heart Disease ,Underpinning research ,1.1 Normal biological development and functioning ,2.1 Biological and endogenous factors ,Aetiology ,Generic health relevance ,Cell Differentiation ,Cells ,Cultured ,Cellular Reprogramming ,Chromatin ,Fibroblasts ,Heart ,Human Embryonic Stem Cells ,Humans ,Induced Pluripotent Stem Cells ,Cardiac fibroblast ,Differentiation ,iPSC ,Epicardial ,ATAC-sequencing ,Cardiorespiratory Medicine and Haematology ,Medical Physiology ,Cardiovascular System & Hematology ,Biochemistry and cell biology ,Cardiovascular medicine and haematology ,Medical physiology - Abstract
Since the initial isolation of human embryonic stem cells and subsequent discovery of reprogramming methods for somatic cells, thousands of protocols have been developed to create each of the hundreds of cell types found in-vivo with significant focus on disease-prone systems, e.g., cardiovascular. Robust protocols exist for many of these cell types, except for cardiac fibroblasts (CF). Very recently, several competing methods have been developed to generate these cells through a developmentally conserved epicardial pathway. Such methods generate epicardial cells, but here we report that prolonged exposure to growth factors such as bFGF induces fibroblast spindle-like morphology and similar chromatin architecture to primary CFs. Media conditions for growth and assays are provided, as well as suggestions for seeding densities and timepoints for protein harvest of extracellular matrix. We demonstrate marker expression and matrix competency of resultant cells as shown next to primary human cardiac fibroblasts. These methods provide additional guidance to the original protocol and result in an increasingly stable phenotype.
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- 2022
11. Acetabular Bone Marrow Aspiration During Total Hip Arthroplasty
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Ruoss, Severin, Ball, Scott T, Dorn, Shanelle N, Parekh, Jesal N, Whitehead, Alexander J, Engler, Adam J, and Ward, Samuel R
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Patient Safety ,Musculoskeletal ,Acetabulum ,Arthroplasty ,Replacement ,Hip ,Bone Marrow ,Bone Marrow Cells ,Humans ,Ilium ,Clinical Sciences ,Orthopedics - Abstract
Biologically augmented surgical treatments of orthopaedic conditions are increasingly popular. Bone marrow aspirate concentrate is a key orthobiologic tissue source, and the field is moving from the standard iliac crest marrow aspiration toward local aspirations of marrow depots that are accessible during the standard-of-care procedures in an attempt to reduce morbidity, surgery time, and cost. Here, we present the aspiration of the standard iliac marrow depot, but through a novel acetabular approach during total hip arthroplasty. This procedure markedly simplifies biologic augmentation with bone marrow aspirate concentrate in this large patient cohort.
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- 2021
12. Systemic and CNS manifestations of inherited cerebrovascular malformations
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Hart, Blaine L, Mabray, Marc C, Morrison, Leslie, Whitehead, Kevin J, and Kim, Helen
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Biomedical and Clinical Sciences ,Ophthalmology and Optometry ,Rare Diseases ,Neurodegenerative ,Neurosciences ,Genetics ,Brain Disorders ,2.1 Biological and endogenous factors ,Aetiology ,Cerebral Arteries ,Diagnostic Imaging ,Hemangioma ,Cavernous ,Central Nervous System ,Humans ,Skin ,Telangiectasia ,Hereditary Hemorrhagic ,Cerebrovascular malformations ,Cerebral cavernous malformation ,Arteriovenous malformation ,Neurocutaneous syndrome ,Capillary malformation-arteriovenous ,malformation ,Capillary malformation-arteriovenous malformation ,Clinical Sciences ,Nuclear Medicine & Medical Imaging ,Clinical sciences - Abstract
Cerebrovascular malformations occur in both sporadic and inherited patterns. This paper reviews imaging and clinical features of cerebrovascular malformations with a genetic basis. Genetic diseases such as familial cerebral cavernous malformations and hereditary hemorrhagic telangiectasia often have manifestations in bone, skin, eyes, and visceral organs, which should be recognized. Genetic and molecular mechanisms underlying the inherited disorders are becoming better understood, and treatments are likely to follow. An interaction between the intestinal microbiome and formation of cerebral cavernous malformations has emerged, with possible treatment implications. Two-hit mechanisms are involved in these disorders, and additional triggering mechanisms are part of the development of malformations. Hereditary hemorrhagic telangiectasia encompasses a variety of vascular malformations, with widely varying risks, and a more recently recognized association with cortical malformations. Somatic mutations are implicated in the genesis of some sporadic malformations, which means that discoveries related to inherited disorders may aid treatment of sporadic cases. This paper summarizes the current state of knowledge of these conditions, salient features regarding mechanisms of development, and treatment prospects.
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- 2021
13. Regenerative cross talk between cardiac cells and macrophages
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Whitehead, Alexander J and Engler, Adam J
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Regenerative Medicine ,Heart Disease ,Genetics ,Pediatric ,Heart Disease - Coronary Heart Disease ,Cardiovascular ,Aetiology ,Underpinning research ,1.1 Normal biological development and functioning ,2.1 Biological and endogenous factors ,Good Health and Well Being ,Animals ,Animals ,Newborn ,Disease Models ,Animal ,Extracellular Matrix ,Fibroblasts ,Fibrosis ,Gene Expression Profiling ,Gene Expression Regulation ,Heart ,Inflammation ,Macrophages ,Mice ,Myocardial Infarction ,Myocardium ,Myocytes ,Cardiac ,RNA-Seq ,Regeneration ,Single-Cell Analysis ,fibrosis ,gene expression and regulation ,inflammation ,myocardial infarction ,myocardial regeneration ,Physiology ,Medical Physiology ,Cardiovascular System & Hematology - Abstract
Aside from the first week postnatal, murine heart regeneration is restricted and responses to damage follow classic fibrotic remodeling. Recent transcriptomic analyses have suggested that significant cross talk with the sterile immune response could maintain a more embryonic-like signaling network that promotes acute, transient responses. However, with age, this response-likely mediated by neonatal yolk sac macrophages-then transitions to classical macrophage-mediated, cardiac fibroblast (CF)-based remodeling of the extracellular matrix (ECM) after myocardial infarction (MI). The molecular mechanisms that govern the change with age and drive fibrosis via inflammation are poorly understood. Using multiple ribonucleic acid sequencing (RNA-Seq) datasets, we attempt to resolve the relative contributions of CFs and macrophages in the bulk-healing response of regenerative (postnatal day 1) and nonregenerative hearts (postnatal day 8+). We performed an analysis of bulk RNA-Seq datasets from myocardium and cardiac fibroblasts as well as a single-cell RNA-Seq dataset from cardiac macrophages. MI-specific pathway differences revealed that nonregenerative hearts generated more ECM and had larger matricellular responses correlating with inflammation, produced greater chemotactic gradients to recruit macrophages, and expressed receptors for danger-associated molecular patterns at higher levels than neonates. These changes could result in elevated stress-response pathways compared with neonates, converging at NF-κB and activator protein-1 (AP-1) signaling. Profibrotic gene programs, which greatly diverge on day 3 post MI, lay the foundation for chronic fibrosis, and thus postnatal hearts older than 7 days typically exhibit significantly less regeneration. Our analyses suggest that the macrophage ontogenetic shift in the heart postnatally could result in detrimental stress signaling that suppresses regeneration.NEW & NOTEWORTHY Immediately postnatal mammalian hearts are able to regenerate after infarction, but the cells, pathways, and molecules that regulate this behavior are unclear. By comparing RNA-Seq datasets from regenerative mouse hearts and older, nonregenerative hearts, we are able to identify biological processes that are hallmarks of regeneration. We find that sterile inflammatory processes are upregulated in nonregenerative hearts, initiating profibrotic gene programs 3 days after myocardial infarction that can cause myocardial disease.
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- 2021
14. Atomic Force Microscopy for Live-Cell and Hydrogel Measurement.
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Whitehead, Alexander J, Kirkland, Natalie J, and Engler, Adam J
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Cells ,Cultured ,Fibroblasts ,Animals ,Humans ,Microscopy ,Atomic Force ,Cell Transdifferentiation ,Elastic Modulus ,Myofibroblasts ,Atomic force microscopy ,Fibroblast ,Force-curve ,Hydrogels ,Live-cell measurement ,Stiffness ,Young’s modulus ,Developmental Biology ,Other Chemical Sciences ,Biochemistry and Cell Biology - Abstract
Atomic force microscopy (AFM) has emerged as a popular method for determining the mechanical properties of cells, their components, and biomaterials. Here, we describe AFM setup and application to obtain stiffness measurements from single indentations for hydrogels and myofibroblasts.
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- 2021
15. Atomic ForceForcesMicroscopyMicroscopy for Live-Cell and Hydrogel Measurement
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Whitehead, Alexander J, Kirkland, Natalie J, and Engler, Adam J
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Biochemistry and Cell Biology ,Medicinal and Biomolecular Chemistry ,Chemical Sciences ,Biological Sciences ,Biotechnology ,Bioengineering ,Animals ,Cell Transdifferentiation ,Cells ,Cultured ,Elastic Modulus ,Fibroblasts ,Humans ,Microscopy ,Atomic Force ,Myofibroblasts ,Fibroblast ,Atomic force microscopy ,Force-curve ,Stiffness ,Young's modulus ,Hydrogels ,Live-cell measurement ,Young’s modulus ,Other Chemical Sciences ,Developmental Biology ,Biochemistry and cell biology ,Medicinal and biomolecular chemistry - Abstract
Atomic force microscopy (AFM) has emerged as a popular method for determining the mechanical properties of cells, their components, and biomaterials. Here, we describe AFM setup and application to obtain stiffness measurements from single indentations for hydrogels and myofibroblasts.
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- 2021
16. Frequency of epistaxis and telangiectasia in patients with hereditary hemorrhagic telangiectasia (HHT) in comparison with the general population: Curaçao diagnostic criteria revisited
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McDonald, Jamie, Kornish, Jenna, Stevenson, David A., Hanson-Kahn, Andrea, Balch, Heather, James, John, Naik, Hetanshi, and Whitehead, Kevin J.
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- 2023
- Full Text
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17. Graded index lenses for spin wave steering
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Whitehead, N. J., Horsley, S. A. R., Philbin, T. G., and Kruglyak, V. V.
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Physics - Applied Physics ,Condensed Matter - Materials Science - Abstract
We use micromagnetic modelling to demonstrate the operation of graded index lenses designed to steer forward-volume magnetostatic spin waves by 90 and 180 degrees. The graded index profiles require the refractive index to diverge in the lens center, which, for spin waves, can be achieved by modulating the saturation magnetization or external magnetic field in a ferromagnetic film by a small amount. We also show how the 90$^\circ$ lens may be used as a beam divider. Finally, we analyse the robustness of the lenses to deviations from their ideal profiles.
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- 2019
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18. Genotype–Phenotype Correlations in Children with HHT
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Kilian, Alexandra, Latino, Giuseppe A, White, Andrew J, Clark, Dewi, Chakinala, Murali M, Ratjen, Felix, McDonald, Jamie, Whitehead, Kevin J, Gossage, James R, Lin, Doris, Henderson, Katharine, Pollak, Jeffrey, McWilliams, Justin P, Kim, Helen, Lawton, Michael T, and Faughnan, Marie E
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Hematology ,Clinical Research ,Congenital Structural Anomalies ,Lung ,Orphan Drug ,Pediatric ,Rare Diseases ,Genetics ,Neurosciences ,2.1 Biological and endogenous factors ,Aetiology ,Hereditary hemorrhagic telangiectasia ,pediatrics ,genotype-phenotype correlation ,arteriovenous malformation ,ENG ,ACVRL1 ,SMAD4 ,the Brain Vascular Malformation Consortium HHT Investigator Group ,genotype–phenotype correlation ,Clinical Sciences - Abstract
Hereditary hemorrhagic telangiectasia (HHT), a rare autosomal dominant disease mostly caused by mutations in three known genes (ENG, ACVRL1, and SMAD4), is characterized by the development of vascular malformations (VMs). Patients with HHT may present with mucocutaneous telangiectasia, as well as organ arteriovenous malformations (AVMs) of the central nervous system, lungs, and liver. Genotype-phenotype correlations have been well described in adults with HHT. We aimed to investigate genotype-phenotype correlations among pediatric HHT patients. Demographic, clinical, and genetic data were collected and analyzed in 205 children enrolled in the multicenter Brain Vascular Malformation Consortium HHT Project. A chi-square test was used to determine the association between phenotypic presentations and genotype. Among 205 patients (age range: 0-18 years; mean: 11 years), ENG mutation was associated with the presence of pulmonary AVMs (p < 0.001) and brain VM (p < 0.001). The presence of a combined phenotype-defined as both pulmonary AVMs and brain VMs-was also associated with ENG mutation. Gastrointestinal bleeding was rare (4.4%), but was associated with SMAD4 genotype (p < 0.001). We conclude that genotype-phenotype correlations among pediatric HHT patients are similar to those described among adults. Specifically, pediatric patients with ENG mutation have a greater prevalence of pulmonary AVMs, brain VMs, and a combined phenotype.
- Published
- 2020
19. Behavioral context improves optogenetic stimulation of transplanted dopaminergic cells in unilateral 6-OHDA rats
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Anderson, Kevin A., Whitehead, Bailey J., Petersen, Eric D., Kemme, Madison R., Wedster, Anna, Hochgeschwender, Ute, and Sandstrom, Michael I.
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- 2023
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20. Cerebral hypoperfusion exacerbates traumatic brain injury in male but not female mice
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Whitehead, Bailey J., primary, Corbin, Deborah, additional, Alexander, Megan L., additional, Bumgarner, Jacob, additional, Zhang, Ning, additional, Karelina, Kate, additional, and Weil, Zachary M., additional
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- 2024
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21. Combination anti-HIV antibodies provide sustained virological suppression
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Sneller, Michael C., Blazkova, Jana, Justement, J. Shawn, Shi, Victoria, Kennedy, Brooke D., Gittens, Kathleen, Tolstenko, Jekaterina, McCormack, Genevieve, Whitehead, Emily J., Schneck, Rachel F., Proschan, Michael A., Benko, Erika, Kovacs, Colin, Oguz, Cihan, Seaman, Michael S., Caskey, Marina, Nussenzweig, Michel C., Fauci, Anthony S., Moir, Susan, and Chun, Tae-Wook
- Published
- 2022
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22. A Luneburg lens for spin waves
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Whitehead, N. J., Horsley, S. A. R., Philbin, T. G., and Kruglyak, V. V.
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Physics - Applied Physics ,Condensed Matter - Materials Science - Abstract
We report on the theory of a Luneburg lens for forward-volume magnetostatic spin waves, and verify its operation via micromagnetic modelling. The lens converts a plane wave to a point source (and vice versa) by a designed graded index, realised here by either modulating the thickness or the saturation magnetization in a circular region. We find that the lens enhances the wave amplitude by 5 times at the lens focus, and 47% of the incident energy arrives in the focus region. Furthermore, small deviations in the profile can still result in good focusing, if the lens index is graded smoothly.
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- 2018
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23. Distinct cellular roles for PDCD10 define a gut-brain axis in cerebral cavernous malformation
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Tang, Alan T, Sullivan, Katie R, Hong, Courtney C, Goddard, Lauren M, Mahadevan, Aparna, Ren, Aileen, Pardo, Heidy, Peiper, Amy, Griffin, Erin, Tanes, Ceylan, Mattei, Lisa M, Yang, Jisheng, Li, Li, Mericko-Ishizuka, Patricia, Shen, Le, Hobson, Nicholas, Girard, Romuald, Lightle, Rhonda, Moore, Thomas, Shenkar, Robert, Polster, Sean P, Rödel, Claudia J, Li, Ning, Zhu, Qin, Whitehead, Kevin J, Zheng, Xiangjian, Akers, Amy, Morrison, Leslie, Kim, Helen, Bittinger, Kyle, Lengner, Christopher J, Schwaninger, Markus, Velcich, Anna, Augenlicht, Leonard, Abdelilah-Seyfried, Salim, Min, Wang, Marchuk, Douglas A, Awad, Issam A, and Kahn, Mark L
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Rare Diseases ,Neurosciences ,Genetics ,Brain Disorders ,Aetiology ,2.1 Biological and endogenous factors ,Oral and gastrointestinal ,Animals ,Apoptosis Regulatory Proteins ,Brain ,Carrier Proteins ,Colitis ,Dexamethasone ,Dextran Sulfate ,Endothelial Cells ,Epithelial Cells ,Gastrointestinal Microbiome ,Gastrointestinal Tract ,Hemangioma ,Cavernous ,Central Nervous System ,Humans ,Intestinal Mucosa ,KRIT1 Protein ,Ligands ,Membrane Proteins ,Mice ,Proto-Oncogene Proteins ,Signal Transduction ,Toll-Like Receptor 4 ,Biological Sciences ,Medical and Health Sciences - Abstract
Cerebral cavernous malformation (CCM) is a genetic, cerebrovascular disease. Familial CCM is caused by genetic mutations in KRIT1, CCM2, or PDCD10 Disease onset is earlier and more severe in individuals with PDCD10 mutations. Recent studies have shown that lesions arise from excess mitogen-activated protein kinase kinase kinase 3 (MEKK3) signaling downstream of Toll-like receptor 4 (TLR4) stimulation by lipopolysaccharide derived from the gut microbiome. These findings suggest a gut-brain CCM disease axis but fail to define it or explain the poor prognosis of patients with PDCD10 mutations. Here, we demonstrate that the gut barrier is a primary determinant of CCM disease course, independent of microbiome configuration, that explains the increased severity of CCM disease associated with PDCD10 deficiency. Chemical disruption of the gut barrier with dextran sulfate sodium augments CCM formation in a mouse model, as does genetic loss of Pdcd10, but not Krit1, in gut epithelial cells. Loss of gut epithelial Pdcd10 results in disruption of the colonic mucosal barrier. Accordingly, loss of Mucin-2 or exposure to dietary emulsifiers that reduce the mucus barrier increases CCM burden analogous to loss of Pdcd10 in the gut epithelium. Last, we show that treatment with dexamethasone potently inhibits CCM formation in mice because of the combined effect of action at both brain endothelial cells and gut epithelial cells. These studies define a gut-brain disease axis in an experimental model of CCM in which a single gene is required for two critical components: gut epithelial function and brain endothelial signaling.
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- 2019
24. Biomarkers of cavernous angioma with symptomatic hemorrhage
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Lyne, Seán B, Girard, Romuald, Koskimäki, Janne, Zeineddine, Hussein A, Zhang, Dongdong, Cao, Ying, Li, Yan, Stadnik, Agnieszka, Moore, Thomas, Lightle, Rhonda, Shi, Changbin, Shenkar, Robert, Carrión-Penagos, Julián, Polster, Sean P, Romanos, Sharbel, Akers, Amy, Lopez-Ramirez, Miguel, Whitehead, Kevin J, Kahn, Mark L, Ginsberg, Mark H, Marchuk, Douglas A, and Awad, Issam A
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Prevention ,Clinical Research ,Clinical Trials and Supportive Activities ,4.1 Discovery and preclinical testing of markers and technologies ,Detection ,screening and diagnosis ,4.2 Evaluation of markers and technologies ,Good Health and Well Being ,Adult ,Biomarkers ,Cohort Studies ,Female ,Hemangioma ,Cavernous ,Hemorrhage ,Humans ,Inflammation Mediators ,Longitudinal Studies ,Machine Learning ,Male ,Transcriptome ,Diagnostics ,Inflammation ,Stroke ,Vascular Biology - Abstract
BACKGROUNDCerebral cavernous angiomas (CAs) with a symptomatic hemorrhage (CASH) have a high risk of recurrent hemorrhage and serious morbidity.METHODSEighteen plasma molecules with mechanistic roles in CA pathobiology were investigated in 114 patients and 12 healthy subjects. The diagnostic biomarker of a CASH in the prior year was derived as that minimizing the Akaike information criterion and validated using machine learning, and was compared with the prognostic CASH biomarker predicting bleeding in the subsequent year. Biomarkers were longitudinally followed in a subset of cases. The biomarkers were queried in the lesional neurovascular unit (NVU) transcriptome and in plasma miRNAs from CASH and non-CASH patients.RESULTSThe diagnostic CASH biomarker included a weighted combination of soluble CD14 (sCD14), VEGF, C-reactive protein (CRP), and IL-10 distinguishing CASH patients with 76% sensitivity and 80% specificity (P = 0.0003). The prognostic CASH biomarker (sCD14, VEGF, IL-1β, and sROBO-4) was confirmed to predict a bleed in the subsequent year with 83% sensitivity and 93% specificity (P = 0.001). Genes associated with diagnostic and prognostic CASH biomarkers were differentially expressed in CASH lesional NVUs. Thirteen plasma miRNAs were differentially expressed between CASH and non-CASH patients.CONCLUSIONShared and unique biomarkers of recent symptomatic hemorrhage and of future bleeding in CA are mechanistically linked to lesional transcriptome and miRNA. The biomarkers may be applied for risk stratification in clinical trials and developed as a tool in clinical practice.FUNDINGNIH, William and Judith Davis Fund in Neurovascular Surgery Research, Be Brave for Life Foundation, Safadi Translational Fellowship, Pritzker School of Medicine, and Sigrid Jusélius Foundation.
- Published
- 2019
25. Choroidal melanoma with synchronous Fuchs’ adenoma and novel ATRX mutation
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Harford, Elli, Palmer, Jane M., Glasson, William J., Warrier, Sunil K., Whitehead, Kevin J., Brooks, Kelly M., Johansson, Peter A., Hayward, Nicholas K., and McGrath, Lindsay A.
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- 2022
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26. Improved epicardial cardiac fibroblast generation from iPSCs
- Author
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Whitehead, Alexander J., Hocker, James D., Ren, Bing, and Engler, Adam J.
- Published
- 2022
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- View/download PDF
27. Theory of Linear Spin Wave Emission from a Bloch Domain Wall
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Whitehead, N. J., Horsley, S. A. R., Philbin, T. G., Kuchko, A. N., and Kruglyak, V. V.
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Condensed Matter - Materials Science ,Condensed Matter - Mesoscale and Nanoscale Physics - Abstract
We report an analytical theory of linear emission of exchange spin waves from a Bloch domain wall, excited by a uniform microwave magnetic field. The problem is reduced to a one-dimensional Schr\"odinger-like equation with a P\"oschl-Teller potential and a driving term of the same profile. The emission of plane spin waves is observed at excitation frequencies above a threshold value, as a result of a linear process. The height-to-width aspect ratio of the P\"oschl-Teller profile for a domain wall is found to correspond to a local maximum of the emission efficiency. Furthermore, for a tailored P\"oschl-Teller potential with a variable aspect ratio, particular values of the latter can lead to enhanced or even completely suppressed emission., Comment: added ancillary files
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- 2017
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28. Immunity to fungi and vaccine considerations.
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Whitehead, Alexander J., Woodring, Therese, and Klein, Bruce S.
- Abstract
Fungal disease poses a growing threat to public health that our current antifungal therapies are not well equipped to meet. As the population of immunocompromised hosts expands, and ecological changes favor the emergence of fungal pathogens, the development of new antifungal agents, including vaccines, becomes a global priority. Here, we summarize recent advancements in the understanding of fungal pathogenesis, key features of the host antifungal immune response, and how these findings could be leveraged to design novel approaches to deadly fungal disease. The global burden of fungal disease is rising and has already exceeded the capacity of current antifungal therapies. We summarize recent advancements in understanding fungal pathogenesis, key features of the host antifungal immune response, and how these findings could be leveraged to design novel approaches to deadly fungal disease. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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29. Dynamics of standing dead wood and severe fire in north Australian savannas: implications for carbon management.
- Author
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Whitehead, Peter J., Murphy, Brett P., Evans, Jay, Lynch, Dominique, Yates, Cameron P., Edwards, Andrew, Mcdermott, Harry, and Russell-Smith, Jeremy
- Subjects
CARBON sequestration in forests ,SAVANNAS ,TREE mortality ,CARBON sequestration ,DEAD trees ,FIRE management - Abstract
Background: Many fires in north Australian savannas are severe enough to cause canopy scorch, tree death and removal of stags. Better fire management may increase carbon sequestration in trees, perhaps including stags. Aims: To describe and analyse dynamics of stags in tropical savannas (600–1000 mm annual rainfall) in relation to fire and better understand their role in biomass sequestration. Methods: We monitored marked populations of live and dead trees over 12 years. Statistical models describing influences on stag creation and loss are applied in stag dynamics simulations. Key results: Immediately following severe fire, stag biomass increases acutely because many more live trees are killed than stags removed. Between severe fires, stag losses exceed tree deaths, so peaks are quite short. Many 'new' stags are lost (fallen or consumed) quickly. Conclusions: Between fires, stags comprise ~7.5–8.9% of standing above-ground biomass, more under dry conditions and during recovery from severe fire or other drivers of increased tree mortality. Fire management is unlikely to increase proportions of total woody biomass in stags unless it also reduces live biomass. Implications: Reducing frequency of severe fires can increase total carbon sequestration in dry tropical savannas. Prediction uncertainties and management risks around sequestration present daunting challenges for policy-makers and fire management practitioners. Fire creates stags by killing trees and also removes them. Proportions of stags lost usually exceed per capita mortality rates except after severe fire, when tree deaths greatly outnumber stag losses. Fire management is unlikely to increase the proportion of biomass in stags unless live biomass declines. This article belongs to the Collection Savanna Burning. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
30. E-cigarette aerosol mixtures inhibit biomaterial-induced osseointegrative cell phenotypes
- Author
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Abaricia, Jefferson O, Whitehead, Alexander J, Kandalam, Suraj, Shah, Arth H., Hotchkiss, Kelly M, Morandini, Lais, and Olivares-Navarrete, Rene
- Published
- 2021
- Full Text
- View/download PDF
31. Distinct mechanisms of long-term virologic control in two HIV-infected individuals after treatment interruption of anti-retroviral therapy
- Author
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Blazkova, Jana, Gao, Feng, Marichannegowda, Manukumar Honnayakanahalli, Justement, J. Shawn, Shi, Victoria, Whitehead, Emily J., Schneck, Rachel F., Huiting, Erin D., Gittens, Kathleen, Cottrell, Mackenzie, Benko, Erika, Kovacs, Colin, Lack, Justin, Sneller, Michael C., Moir, Susan, Fauci, Anthony S., and Chun, Tae-Wook
- Published
- 2021
- Full Text
- View/download PDF
32. Systemic and CNS manifestations of inherited cerebrovascular malformations
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Hart, Blaine L., Mabray, Marc C., Morrison, Leslie, Whitehead, Kevin J., and Kim, Helen
- Published
- 2021
- Full Text
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33. Endothelial TLR4 and the microbiome drive cerebral cavernous malformations.
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Tang, Alan T, Choi, Jaesung P, Kotzin, Jonathan J, Yang, Yiqing, Hong, Courtney C, Hobson, Nicholas, Girard, Romuald, Zeineddine, Hussein A, Lightle, Rhonda, Moore, Thomas, Cao, Ying, Shenkar, Robert, Chen, Mei, Mericko, Patricia, Yang, Jisheng, Li, Li, Tanes, Ceylan, Kobuley, Dmytro, Võsa, Urmo, Whitehead, Kevin J, Li, Dean Y, Franke, Lude, Hart, Blaine, Schwaninger, Markus, Henao-Mejia, Jorge, Morrison, Leslie, Kim, Helen, Awad, Issam A, Zheng, Xiangjian, and Kahn, Mark L
- Subjects
Endothelial Cells ,Animals ,Humans ,Mice ,Gram-Negative Bacteria ,Hemangioma ,Cavernous ,Central Nervous System ,Disease Susceptibility ,Lipopolysaccharides ,Anti-Bacterial Agents ,Injections ,Intravenous ,Germ-Free Life ,Signal Transduction ,Female ,Male ,Toll-Like Receptor 4 ,Immunity ,Innate ,Gastrointestinal Microbiome ,Lipopolysaccharide Receptors ,Hemangioma ,Cavernous ,Central Nervous System ,Immunity ,Innate ,Injections ,Intravenous ,General Science & Technology - Abstract
Cerebral cavernous malformations (CCMs) are a cause of stroke and seizure for which no effective medical therapies yet exist. CCMs arise from the loss of an adaptor complex that negatively regulates MEKK3-KLF2/4 signalling in brain endothelial cells, but upstream activators of this disease pathway have yet to be identified. Here we identify endothelial Toll-like receptor 4 (TLR4) and the gut microbiome as critical stimulants of CCM formation. Activation of TLR4 by Gram-negative bacteria or lipopolysaccharide accelerates CCM formation, and genetic or pharmacologic blockade of TLR4 signalling prevents CCM formation in mice. Polymorphisms that increase expression of the TLR4 gene or the gene encoding its co-receptor CD14 are associated with higher CCM lesion burden in humans. Germ-free mice are protected from CCM formation, and a single course of antibiotics permanently alters CCM susceptibility in mice. These studies identify unexpected roles for the microbiome and innate immune signalling in the pathogenesis of a cerebrovascular disease, as well as strategies for its treatment.
- Published
- 2017
34. Can an occupational therapy intervention increase independence in activities of daily living (ADL) in people who use homecare re-ablement services?
- Author
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Whitehead, Phillip J.
- Subjects
615.8 ,WB Practice of medicine - Abstract
Homecare re-ablement services have been widely implemented by local authorities in England, although there are widespread variations in relation to occupational therapy input within them. These services aim to improve users’ ability to manage independently at home and reduce the need for other health and social care services. It is not known whether outcomes are better for people who receive occupational therapy as part of their homecare re-ablement compared with those who do not. This thesis reports a programme of work investigating this, encompassing: a systematic review, a qualitative interview study, and a feasibility randomised controlled trial (RCT) of an occupational therapy intervention targeted at activities of daily living (ADL). For the systematic review, 11 databases were searched and 13 studies were identified comparing interventions to improve performance in ADL with routine homecare. The review found variability in the content of interventions delivered and the measures used for ADL ability. However, there was moderate evidence that the interventions led to improvements in ADL ability, although most effects were not statistically significant. Those interventions involving occupational therapists led to improvements in ADL, but the content of the occupational therapy input varied. Semi-structured qualitative interviews were completed with 12 occupational therapists working in re-ablement services and ten people who had received re-ablement services. Interviews covered experiences and opinions of the service, and were analysed using thematic analysis. Findings were categorised in three themes: (1) Re-ablement: Tasks and Activities (2) Re-ablement: Modalities and Strategies for Delivery, and (3) Facilitators and Barriers. The occupational therapists’ primary focus was delivering graded programmes to improve users’ ability to manage ADL, which they believed they were uniquely placed to provide and tailor to each individual’s needs. People using services valued this graded approach believing that it improved their confidence to manage activities. A feasibility randomised controlled trial (RCT) was conducted in which 30 re-ablement users were randomised to receive either: usual homecare re-ablement without routine OT input (control) (n=15), or usual homecare re-ablement plus a tailored OT programme targeted at ADL (intervention) (n=15). The OT programme was tailored for each participant and included: goal-setting; teaching or practising techniques; equipment and adaptations; and provision of advice or support. Outcomes were: personal and extended ADL; quality of life; falls; and health and social care service use. These were assessed at two-weeks, three and six months post re-ablement. Although there were methodological challenges due to service changes which affected usual care and trial recruitment, it was feasible to enrol and retain participants, deliver the intervention, and collect outcome data which were responsive to change. Participants in both groups showed improvements from baseline, although overall the OT group showed greater improvement; they also used homecare services less frequently and had fewer falls. However, confidence intervals were wide, reflecting the small sample. The intervention was acceptable to participants who particularly valued the tailored advice and support. The principal conclusions were that there is some evidence that interventions targeted at personal activities of daily living can reduce homecare service users’ dependency. Although the content of interventions is variable, those involving occupational therapists appear to be beneficial. Occupational therapists believed that their specialist skills and knowledge in ADL performance were essential facilitators implementing an approach which was suited to each individual’s needs and therefore to successful re-ablement. The RCT was feasible and a further powered definitive study is warranted, subject to methodological alterations. The favourable trends in the OT group indicate the potential benefits in this population group. This is the first RCT of occupational therapy in homecare re-ablement and it is therefore important in the development of the evidence base for this area of practice. A definitive RCT is needed given the widespread national and local government investment, and policy and legislation that continues to underpin the development of homecare re-ablement services.
- Published
- 2016
35. Investigation of the Genetic Determinants of Telangiectasia and Solid Organ Arteriovenous Malformation Formation in Hereditary Hemorrhagic Telangiectasia (HHT).
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Whitehead, Kevin J., Toydemir, Doruk, Wooderchak-Donahue, Whitney, Oakley, Gretchen M., McRae, Bryan, Putnam, Angelica, McDonald, Jamie, and Bayrak-Toydemir, Pinar
- Subjects
- *
HEREDITARY hemorrhagic telangiectasia , *ARTERIOVENOUS malformation , *TELANGIECTASIA , *SOMATIC mutation , *GALLBLADDER , *LUNGS , *CANCER genes - Abstract
Telangiectases and arteriovenous malformations (AVMs) are the characteristic lesions of Hereditary Hemorrhagic Telangiectasia (HHT). Somatic second-hit loss-of-function variations in the HHT causative genes, ENG and ACVRL1, have been described in dermal telangiectasias. It is unclear if somatic second-hit mutations also cause the formation of AVMs and nasal telangiectasias in HHT. To investigate the genetic mechanism of AVM formation in HHT, we evaluated multiple affected tissues from fourteen individuals. DNA was extracted from fresh/frozen tissue of 15 nasal telangiectasia, 4 dermal telangiectasia, and 9 normal control tissue biopsies, from nine unrelated individuals with HHT. DNA from six formalin-fixed paraffin-embedded (FFPE) AVM tissues (brain, lung, liver, and gallbladder) from five individuals was evaluated. A 736 vascular malformation and cancer gene next-generation sequencing (NGS) panel was used to evaluate these tissues down to 1% somatic mosaicism. Somatic second-hit mutations were identified in three in four AVM biopsies (75%) or half of the FFPE (50%) samples, including the loss of heterozygosity in ENG in one brain AVM sample, in which the germline mutation occurred in a different allele than a nearby somatic mutation (both are loss-of-function mutations). Eight of nine (88.9%) patients in whom telangiectasia tissues were evaluated had a somatic mutation ranging from 0.68 to 1.96% in the same gene with the germline mutation. Six of fifteen (40%) nasal and two of four (50%) dermal telangiectasia had a detectable somatic second hit. Additional low-level somatic mutations in other genes were identified in several telangiectasias. This is the first report that nasal telangiectasias and solid organ AVMs in HHT are caused by very-low-level somatic biallelic second-hit mutations. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
36. Does Nesting Material Affect Wood Duck (Aix sponsa) Nest Box Selection, Reproduction, and Eggshell Bacteria?
- Author
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Shurba, Jacob A., Whitehead, Kristi J., Schley, Hannah L., Bauer, Beau A., Barrett, Kyle, Yarrow, Greg K., and Anderson, James T.
- Abstract
Wood Ducks (Aix sponsa) are secondary cavity nesters that use natural cavities and artificial nest boxes, the latter of which has been attributed to the recovery of populations across the southeastern US. Continual use of these boxes results in a buildup of bacteria, parasites, and other pathogens. To avoid the accumulation of these deleterious organisms, best management practices include the occasional removal of old nesting material (i.e., wood shavings) and replacement with fresh wood shavings. No studies have been performed on the effects of shaving material on nest box selection, nest success, and bacterial growth. We monitored 142 and 111 nest boxes in Florida and Georgia, USA, respectively, and filled a random sample with aspen or cedar shavings. We then swabbed the surface of 144 and 150 eggs during 2020 and 2021, respectively, to screen for culturable bacteria. We detected no effect of shaving type on nest box selection, nest success, or egg surface bacterial growth. We found 3-8 bacterial colony types (1-123 colony-forming units [CFU]/box) and 1-8 bacterial colony types (3-382 CFU/box) among the Georgia and Florida samples, respectively. We detected no effect from shaving type on Wood Duck reproduction or bacterial growth in the sampled nest boxes. We concluded that both shaving types are suitable nesting materials for box-nesting Wood Duck populations and the continued use of either would be a reasonable decision for managers. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
37. Immunologic and Virologic Parameters Associated With Human Immunodeficiency Virus (HIV) DNA Reservoir Size in People With HIV Receiving Antiretroviral Therapy.
- Author
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Blazkova, Jana, Whitehead, Emily J, Schneck, Rachel, Shi, Victoria, Justement, J Shawn, Rai, M Ali, Kennedy, Brooke D, Manning, Maegan R, Praiss, Lauren, Gittens, Kathleen, Wender, Paul A, Oguz, Cihan, Lack, Justin, Moir, Susan, and Chun, Tae-Wook
- Subjects
- *
HIV , *ANTIRETROVIRAL agents , *HIV-positive persons , *OVERWEIGHT persons , *DNA - Abstract
Background A better understanding of the dynamics of human immunodeficiency virus (HIV) reservoirs in CD4+ T cells of people with HIV (PWH) receiving antiretroviral therapy (ART) is crucial for developing therapies to eradicate the virus. Methods We conducted a study involving 28 aviremic PWH receiving ART with high and low levels of HIV DNA. We analyzed immunologic and virologic parameters and their association with the HIV reservoir size. Results The frequency of CD4+ T cells carrying HIV DNA was associated with higher pre-ART plasma viremia, lower pre-ART CD4+ T-cell counts, and lower pre-ART CD4/CD8 ratios. During ART, the High group maintained elevated levels of intact HIV proviral DNA, cell-associated HIV RNA, and inducible virion-associated HIV RNA. HIV sequence analysis showed no evidence for preferential accumulation of defective proviruses nor higher frequencies of clonal expansion in the High versus Low group. Phenotypic and functional T-cell analyses did not show enhanced immune-mediated virologic control in the Low versus High group. Of considerable interest, pre-ART innate immunity was significantly higher in the Low versus High group. Conclusions Our data suggest that innate immunity at the time of ART initiation may play an important role in modulating the dynamics and persistence of viral reservoirs in PWH. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
38. Immunologic and virologic parameters associated with HIV DNA reservoir size in people living with HIV receiving antiretroviral therapy
- Author
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Blazkova, Jana, primary, Whitehead, Emily J, additional, Schneck, Rachel, additional, Shi, Victoria, additional, Justement, J Shawn, additional, Rai, M Ali, additional, Kennedy, Brooke D, additional, Manning, Maegan R, additional, Praiss, Lauren, additional, Gittens, Kathleen, additional, Wender, Paul A, additional, Oguz, Cihan, additional, Lack, Justin, additional, Moir, Susan, additional, and Chun, Tae-Wook, additional
- Published
- 2023
- Full Text
- View/download PDF
39. Horace, I Dream of Watches
- Author
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WHITEHEAD, GARY J.
- Published
- 2019
40. Cardiac-specific deletion of voltage dependent anion channel 2 leads to dilated cardiomyopathy by altering calcium homeostasis
- Author
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Shankar, Thirupura S., Ramadurai, Dinesh K. A., Steinhorst, Kira, Sommakia, Salah, Badolia, Rachit, Thodou Krokidi, Aspasia, Calder, Dallen, Navankasattusas, Sutip, Sander, Paulina, Kwon, Oh Sung, Aravamudhan, Aishwarya, Ling, Jing, Dendorfer, Andreas, Xie, Changmin, Kwon, Ohyun, Cheng, Emily H. Y., Whitehead, Kevin J., Gudermann, Thomas, Richardson, Russel S., Sachse, Frank B., Schredelseker, Johann, Spitzer, Kenneth W., Chaudhuri, Dipayan, and Drakos, Stavros G.
- Published
- 2021
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41. Predicting Post-Myocardial Infarction Matrix Responses
- Author
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Whitehead, Alexander J
- Subjects
Biomedical engineering ,Molecular biology ,Medicine ,Cardiac Fibrosis ,Extracellular Matrix ,Fibroblast ,Gene Regulation ,Infarction ,Inflammation - Abstract
After myocardial infarction (MI), the matrix response largely dictates how long you will live. Most heart failure after MI occurs a few months thereafter, aligning with the time fibroblasts require to deposit a scar. This dissertation focuses on how neonatal mammals can regenerate their hearts after MI and how we can interrogate these molecular hypotheses in-vitro. Chapter 1 provides an overview of the infarction cascade, known cellular and biomolecular contributions to inflammation, and the composition and structure of the extracellular matrix. Chapter 2 discusses how neonatal and adult cardiac healing differ. RNA-seq datasets were mined to provide insight to key pathways, receptors, and ligands that uniquely contribute to adult scar formation. Chapter 3 establishes an induced pluripotent stem cell (iPSC) to cardiac fibroblast (CF) differentiation through the epicardial lineage. Marker expression, matrix assembly, stress response, and chromatin architecture relative to other contemporary protocols and primary cells are characterized. Chapter 4 tests the central informatic hypotheses generated in chapter 2, particularly with respect to sterile inflammatory ligands (TGF-β, low molecular weight hyaluronic acid, and angiotensin II). It also investigates how these stress responses manifest in patients with single nucleotide polymorphisms (SNPs) in a long noncoding RNA (lncRNA) that worsen cardiovascular outcomes clinically. Chapter 5 is an extended discussion of the cumulative results, significance, and potential future approaches to cardiac fibrosis modeling. The discoveries herein demonstrate a novel method of reductionist fibrotic modeling in-vitro, highlight central fibrotic pathways, and suggest therapeutic targets.
- Published
- 2022
42. Predicting Glycaemia in Type 1 Diabetes Patients: Experiments in Feature Engineering and Data Imputation
- Author
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Jeon, Jouhyun, Leimbigler, Peter J., Baruah, Gaurav, Li, Michael H., Fossat, Yan, and Whitehead, Alfred J.
- Published
- 2020
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43. Simulating Star Clusters with the AMUSE Software Framework: I. Dependence of Cluster Lifetimes on Model Assumptions and Cluster Dissolution Modes
- Author
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Whitehead, Alfred J., McMillan, Stephen L. W., Vesperini, Enrico, and Zwart, Simon Portegies
- Subjects
Astrophysics - Galaxy Astrophysics - Abstract
We perform a series of simulations of evolving star clusters using AMUSE (the Astrophysical Multipurpose Software Environment), a new community-based multi-physics simulation package, and compare our results to existing work. These simulations model a star cluster beginning with a King model distribution and a selection of power-law initial mass functions, and contain a tidal cut-off. They are evolved using collisional stellar dynamics and include mass loss due to stellar evolution. After determining that the differences between AMUSE results and prior publications are understood, we explored the variation in cluster lifetimes due to the random realization noise introduced by transforming a King model to specific initial conditions. This random realization noise can affect the lifetime of a simulated star cluster by up to 30%. Two modes of star cluster dissolution were identified: a mass evolution curve that contains a run-away cluster dissolution with a sudden loss of mass, and a dissolution mode that does not contain this feature. We refer to these dissolution modes as "dynamical" and "relaxation" dominated respectively. For Salpeter-like initial mass functions, we determined the boundary between these two modes in terms of the dynamical and relaxation time scales., Comment: 12 pages, 10 figures, accepted by ApJ 2013-10-07
- Published
- 2013
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44. Atomic Force Microscopy for Live-Cell and Hydrogel Measurement
- Author
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Whitehead, Alexander J., primary, Kirkland, Natalie J., additional, and Engler, Adam J., additional
- Published
- 2021
- Full Text
- View/download PDF
45. Exome-based search for recurrent disease-causing alleles in Russian population
- Author
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Yanus, Grigoriy A., Akhapkina, Tatiana A., Whitehead, Aldon J., Bizin, Ilya V., Iyevleva, Aglaya G., Kuligina, Ekaterina Sh., Aleksakhina, Svetlana N., Anisimova, Maria O., Holmatov, Maxim M., Romanko, Alexandr A., Zaitseva, Olga A., Yatsuk, Olga S., Zagorodnev, Kirill A., Matsneva, Maria A., Koloskov, Andrey V., Togo, Alexandr V., Suspitsin, Evgeny N., and Imyanitov, Evgeny N.
- Published
- 2019
- Full Text
- View/download PDF
46. Chemical vapour deposition synthetic diamond: materials, technology and applications
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Balmer, R S, Brandon, J R, Clewes, S L, Dhillon, H K, Dodson, J M, Friel, I, Inglis, P N, Madgwick, T D, Markham, M L, Mollart, T P, Perkins, N, Scarsbrook, G A, Twitchen, D J, Whitehead, A J, Wilman, J J, and Woollard, S M
- Subjects
Condensed Matter - Materials Science - Abstract
Substantial developments have been achieved in the synthesis of chemical vapour deposition (CVD) diamond in recent years, providing engineers and designers with access to a large range of new diamond materials. CVD diamond has a number of outstanding material properties that can enable exceptional performance in applications as diverse as medical diagnostics, water treatment, radiation detection, high power electronics, consumer audio, magnetometry and novel lasers. Often the material is synthesized in planar form, however non-planar geometries are also possible and enable a number of key applications. This article reviews the material properties and characteristics of single crystal and polycrystalline CVD diamond, and how these can be utilized, focusing particularly on optics, electronics and electrochemistry. It also summarizes how CVD diamond can be tailored for specific applications, based on the ability to synthesize a consistent and engineered high performance product., Comment: 51 pages, 16 figures
- Published
- 2009
- Full Text
- View/download PDF
47. AP-1 signaling modulates cardiac fibroblast stress responses
- Author
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Whitehead, Alexander J., primary, Atcha, Hamza, additional, Hocker, James D., additional, Ren, Bing, additional, and Engler, Adam J., additional
- Published
- 2023
- Full Text
- View/download PDF
48. PATH-HHT, a Double-Blind, Randomized, Placebo-Controlled Trial in Hereditary Hemorrhagic Telangiectasia Demonstrates That Pomalidomide Reduces Epistaxis and Improves Quality of Life
- Author
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Al-Samkari, Hanny, primary, Kasthuri, Raj S., additional, Iyer, Vivek, additional, Pishko, Allyson M, additional, Decker, Jake E, additional, Whitehead, Kevin J, additional, Conrad, Miles B, additional, Weiss, Clifford, additional, Parambil, Joseph, additional, Zumberg, Marc Stuart, additional, Zhou, Jenny Y, additional, Boyer, Holly C, additional, Sutton, Vernon R, additional, Mazepa, Marshall, additional, Bradley, Lauren, additional, Clancy, Marianne S., additional, Wisniewski, Lisa, additional, Carper, Benjamin, additional, Catellier, Diane, additional, Thomas, Sonia M, additional, and McCrae, Keith R., additional
- Published
- 2023
- Full Text
- View/download PDF
49. Conductive electrospun polymer improves stem cell-derived cardiomyocyte function and maturation
- Author
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Gonzalez, Gisselle, primary, Nelson, Aileena C., additional, Holman, Alyssa R., additional, Whitehead, Alexander J., additional, LaMontagne, Erin, additional, Lian, Rachel, additional, Vatsyayan, Ritwik, additional, Dayeh, Shadi A., additional, and Engler, Adam J., additional
- Published
- 2023
- Full Text
- View/download PDF
50. Growth Fault–Induced Effects on Tidal Marsh Surficial Processes and Landscape Conversion in the Slop Bowl, Brazoria National Wildlife Refuge, Texas
- Author
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Whitehead, Samuel J., primary, Yeager, Kevin M., additional, Feagin, Rusty A., additional, Huff, Thomas P., additional, Paine, Jeffrey G., additional, Schindler, Kimberly J., additional, and Dixon, Timothy S., additional
- Published
- 2023
- Full Text
- View/download PDF
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