12 results on '"Waltman, Peter"'
Search Results
2. Clinician-centric diagnosis of rare genetic diseases: performance of a gene pertinence metric in decision support for clinicians
- Author
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Segal, Michael M., George, Renee, Waltman, Peter, El-Hattab, Ayman W., James, Kiely N., Stanley, Valentina, and Gleeson, Joseph
- Published
- 2020
- Full Text
- View/download PDF
3. Comprehensive molecular characterization of clear cell renal cell carcinoma
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Creighton, Chad J., Morgan, Margaret, Gunaratne, Preethi H., Wheeler, David A., Gibbs, Richard A., Robertson, Gordon A., Chu, Andy, Beroukhim, Rameen, Cibulskis, Kristian, Signoretti, Sabina, Hsin-Ta Wu, Fabio Vandin, Raphael, Benjamin J., Verhaak, Roel G. W., Tamboli, Pheroze, Torres-Garcia, Wandaliz, Akbani, Rehan, Weinstein, John N., Reuter, Victor, Hsieh, James J., Brannon, Rose A., Ari Hakimi, A., Jacobsen, Anders, Ciriello, Giovanni, Reva, Boris, Ricketts, Christopher J., Linehan, Marston W., Stuart, Joshua M., Rathmell, Kimryn W., Shen, Hui, Laird, Peter W., Muzny, Donna, Davis, Caleb, Xi, Liu, Chang, Kyle, Kakkar, Nipun, Treviño, Lisa R., Benton, Susan, Reid, Jeffrey G., Morton, Donna, Doddapaneni, Harsha, Han, Yi, Lewis, Lora, Dinh, Huyen, Kovar, Christie, Zhu, Yiming, Santibanez, Jireh, Wang, Min, Hale, Walker, Kalra, Divya, Getz, Gad, Lawrence, Michael S., Sougnez, Carrie, Carter, Scott L., Sivachenko, Andrey, Lichtenstein, Lee, Stewart, Chip, Voet, Doug, Fisher, Sheila, Gabriel, Stacey B., Lander, Eric, Schumacher, Steve E., Tabak, Barbara, Saksena, Gordon, Onofrio, Robert C., Cherniack, Andrew D., Gentry, Jeff, Ardlie, Kristin, Meyerson, Matthew, Chun, Hye-Jung E., Mungall, Andrew J., Sipahimalani, Payal, Stoll, Dominik, Ally, Adrian, Balasundaram, Miruna, Butterfield, Yaron S. N., Carlsen, Rebecca, Carter, Candace, Chuah, Eric, Coope, Robin J. N., Dhalla, Noreen, Gorski, Sharon, Guin, Ranabir, Hirst, Carrie, Hirst, Martin, Holt, Robert A., Lebovitz, Chandra, Lee, Darlene, Li, Haiyan I., Mayo, Michael, Moore, Richard A., Pleasance, Erin, Plettner, Patrick, Schein, Jacqueline E., Shafiei, Arash, Slobodan, Jared R., Tam, Angela, Thiessen, Nina, Varhol, Richard J., Wye, Natasja, Zhao, Yongjun, Birol, Inanc, Jones, Steven J. M., Marra, Marco A., Auman, Todd J., Tan, Donghui, Jones, Corbin D., Hoadley, Katherine A., Mieczkowski, Piotr A., Mose, Lisle E., Jefferys, Stuart R., Topal, Michael D., Liquori, Christina, Turman, Yidi J., Shi, Yan, Waring, Scot, Buda, Elizabeth, Walsh, Jesse, Wu, Junyuan, Bodenheimer, Tom, Hoyle, Alan P., Simons, Janae V., Soloway, Mathew G., Balu, Saianand, Parker, Joel S., Hayes, Neil D., Perou, Charles M., Kucherlapati, Raju, Park, Peter, Triche, Timothy, Jr, Weisenberger, Daniel J., Lai, Phillip H., Bootwalla, Moiz S., Maglinte, Dennis T., Mahurkar, Swapna, Berman, Benjamin P., Van Den Berg, David J., Cope, Leslie, Baylin, Stephen B., Noble, Michael S., DiCara, Daniel, Zhang, Hailei, Cho, Juok, Heiman, David I., Gehlenborg, Nils, Mallard, William, Lin, Pei, Frazer, Scott, Stojanov, Petar, Liu, Yingchun, Zhou, Lihua, Kim, Jaegil, Chin, Lynda, Vandin, Fabio, Wu, Hsin-Ta, Benz, Christopher, Yau, Christina, Reynolds, Sheila M., Shmulevich, Ilya, Verhaak, Roel G.W., Vegesna, Rahul, Kim, Hoon, Zhang, Wei, Cogdell, David, Jonasch, Eric, Ding, Zhiyong, Lu, Yiling, Zhang, Nianxiang, Unruh, Anna K., Casasent, Tod D., Wakefield, Chris, Tsavachidou, Dimitra, Mills, Gordon B., Schultz, Nikolaus, Antipin, Yevgeniy, Gao, Jianjiong, Cerami, Ethan, Gross, Benjamin, Aksoy, Arman B., Sinha, Rileen, Weinhold, Nils, Sumer, Onur S., Taylor, Barry S., Shen, Ronglai, Ostrovnaya, Irina, Berger, Michael F., Ladanyi, Marc, Sander, Chris, Fei, Suzanne S., Stout, Andrew, Spellman, Paul T., Rubin, Daniel L., Liu, Tiffany T., Ng, Sam, Paull, Evan O., Carlin, Daniel, Goldstein, Theodore, Waltman, Peter, Ellrott, Kyle, Zhu, Jing, Haussler, David, Xiao, Weimin, Shelton, Candace, Gardner, Johanna, Penny, Robert, Sherman, Mark, Mallery, David, Morris, Scott, Paulauskis, Joseph, Burnett, Ken, Shelton, Troy, Kaelin, William G., Choueiri, Toni, Atkins, Michael B., Curley, Erin, Tickoo, Satish, Thorne, Leigh, Boice, Lori, Huang, Mei, Fisher, Jennifer C., Vocke, Cathy D., Peterson, James, Worrell, Robert, Merino, Maria J., Schmidt, Laura S., Czerniak, Bogdan A., Aldape, Kenneth D., Wood, Christopher G., Boyd, Jeff, Weaver, JoEllen, Iacocca, Mary V., Petrelli, Nicholas, Witkin, Gary, Brown, Jennifer, Czerwinski, Christine, Huelsenbeck-Dill, Lori, Rabeno, Brenda, Myers, Jerome, Morrison, Carl, Bergsten, Julie, Eckman, John, Harr, Jodi, Smith, Christine, Tucker, Kelinda, Zach, Leigh Anne, Bshara, Wiam, Gaudioso, Carmelo, Dhir, Rajiv, Maranchie, Jodi, Nelson, Joel, Parwani, Anil, Potapova, Olga, Fedosenko, Konstantin, Cheville, John C., Thompson, Houston R., Mosquera, Juan M., Rubin, Mark A., Blute, Michael L., Pihl, Todd, Jensen, Mark, Sfeir, Robert, Kahn, Ari, Chu, Anna, Kothiyal, Prachi, Snyder, Eric, Pontius, Joan, Ayala, Brenda, Backus, Mark, Walton, Jessica, Baboud, Julien, Berton, Dominique, Nicholls, Matthew, Srinivasan, Deepak, Raman, Rohini, Girshik, Stanley, Kigonya, Peter, Alonso, Shelley, Sanbhadti, Rashmi, Barletta, Sean, Pot, David, Sheth, Margi, Demchok, John A., Davidsen, Tanja, Wang, Zhining, Yang, Liming, Tarnuzzer, Roy W., Zhang, Jiashan, Eley, Greg, Ferguson, Martin L., Mills Shaw, Kenna R., Guyer, Mark S., Ozenberger, Bradley A., and Sofia, Heidi J.
- Published
- 2013
- Full Text
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4. Comprehensive genomic characterization of squamous cell lung cancers
- Author
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Hammerman, Peter S., Lawrence, Michael S., Voet, Douglas, Jing, Rui, Cibulskis, Kristian, Sivachenko, Andrey, Stojanov, Petar, McKenna, Aaron, Lander, Eric S., Gabriel, Stacey, Getz, Gad, Sougnez, Carrie, Imielinski, Marcin, Helman, Elena, Hernandez, Bryan, Pho, Nam H., Meyerson, Matthew, Chu, Andy, Chun, Hye-Jung E., Mungall, Andrew J., Pleasance, Erin, Gordon Robertson, A., Sipahimalani, Payal, Stoll, Dominik, Balasundaram, Miruna, Birol, Inanc, Butterfield, Yaron S. N., Chuah, Eric, Coope, Robin J. N., Corbett, Richard, Dhalla, Noreen, Guin, Ranabir, He, An, Hirst, Carrie, Hirst, Martin, Holt, Robert A., Lee, Darlene, Li, Haiyan I., Mayo, Michael, Moore, Richard A., Mungall, Karen, Ming Nip, Ka, Olshen, Adam, Schein, Jacqueline E., Slobodan, Jared R., Tam, Angela, Thiessen, Nina, Varhol, Richard, Zeng, Thomas, Zhao, Yongjun, Jones, Steven J. M., Marra, Marco A., Saksena, Gordon, Cherniack, Andrew D., Schumacher, Stephen E., Tabak, Barbara, Carter, Scott L., Nguyen, Huy, Onofrio, Robert C., Crenshaw, Andrew, Ardlie, Kristin, Beroukhim, Rameen, Winckler, Wendy, Protopopov, Alexei, Zhang, Jianhua, Hadjipanayis, Angela, Lee, Semin, Xi, Ruibin, Yang, Lixing, Ren, Xiaojia, Zhang, Hailei, Shukla, Sachet, Chen, Peng-Chieh, Haseley, Psalm, Lee, Eunjung, Chin, Lynda, Park, Peter J., Kucherlapati, Raju, Socci, Nicholas D., Liang, Yupu, Schultz, Nikolaus, Borsu, Laetitia, Lash, Alex E., Viale, Agnes, Sander, Chris, Ladanyi, Marc, Todd Auman, J., Hoadley, Katherine A., Wilkerson, Matthew D., Shi, Yan, Liquori, Christina, Meng, Shaowu, Li, Ling, Turman, Yidi J., Topal, Michael D., Tan, Donghui, Waring, Scot, Buda, Elizabeth, Walsh, Jesse, Jones, Corbin D., Mieczkowski, Piotr A., Singh, Darshan, Wu, Junyuan, Gulabani, Anisha, Dolina, Peter, Bodenheimer, Tom, Hoyle, Alan P., Simons, Janae V., Soloway, Matthew G., Mose, Lisle E., Jefferys, Stuart R., Balu, Saianand, OʼConnor, Brian D., Prins, Jan F., Liu, Jinze, Chiang, Derek Y., Neil Hayes, D., Perou, Charles M., Cope, Leslie, Danilova, Ludmila, Weisenberger, Daniel J., Maglinte, Dennis T., Pan, Fei, Van Den Berg, David J., Triche, Timothy, Jr, Herman, James G., Baylin, Stephen B., Laird, Peter W., Noble, Michael, Voet, Doug, Gehlenborg, Nils, DiCara, Daniel, Zhang, Jinhua, Wu, Chang-Jiun, Yingchun Liu, Spring, Zou, Lihua, Lin, Pei, Cho, Juok, Nazaire, Marc-Danie, Robinson, Jim, Thorvaldsdottir, Helga, Mesirov, Jill, Sinha, Rileen, Ciriello, Giovanni, Cerami, Ethan, Gross, Benjamin, Jacobsen, Anders, Gao, Jianjiong, Arman Aksoy, B., Weinhold, Nils, Ramirez, Ricardo, Taylor, Barry S., Antipin, Yevgeniy, Reva, Boris, Shen, Ronglai, Mo, Qianxing, Seshan, Venkatraman, Paik, Paul K., Akbani, Rehan, Zhang, Nianxiang, Broom, Bradley M., Casasent, Tod, Unruh, Anna, Wakefield, Chris, Craig Cason, R., Baggerly, Keith A., Weinstein, John N., Haussler, David, Benz, Christopher C., Stuart, Joshua M., Zhu, Jingchun, Szeto, Christopher, Scott, Gary K., Yau, Christina, Ng, Sam, Goldstein, Ted, Waltman, Peter, Sokolov, Artem, Ellrott, Kyle, Collisson, Eric A., Zerbino, Daniel, Wilks, Christopher, Ma, Singer, Craft, Brian, Du, Ying, Cabanski, Christopher, Walter, Vonn, Marron, J. S., Liu, Yufeng, Wang, Kai, Creighton, Chad J., Zhang, Yiqun, Travis, William D., Rekhtman, Natasha, Yi, Joanne, Aubry, Marie C., Cheney, Richard, Dacic, Sanja, Flieder, Douglas, Funkhouser, William, Illei, Peter, Myers, Jerome, Tsao, Ming-Sound, Penny, Robert, Mallery, David, Shelton, Troy, Hatfield, Martha, Morris, Scott, Yena, Peggy, Shelton, Candace, Sherman, Mark, Paulauskis, Joseph, Govindan, Ramaswamy, Azodo, Ijeoma, Beer, David, Bose, Ron, Byers, Lauren A., Carbone, David, Chang, Li-Wei, Chiang, Derek, Chun, Elizabeth, Collisson, Eric, Ding, Li, Heymach, John, Ida, Cristiane, Johnson, Bruce, Jurisica, Igor, Kaufman, Jacob, Kosari, Farhad, Kwiatkowski, David, Maher, Christopher A., Mungall, Andy, Pao, William, Peifer, Martin, Robertson, Gordon, Rusch, Valerie, Siegfried, Jill, Stuart, Joshua, Thomas, Roman K., Tomaszek, Sandra, Vaske, Charles, Weisenberger, Daniel, Wigle, Dennis A., Yang, Ping, John Zhang, Jianjua, Jensen, Mark A., Sfeir, Robert, Kahn, Ari B., Chu, Anna L., Kothiyal, Prachi, Wang, Zhining, Snyder, Eric E., Pontius, Joan, Pihl, Todd D., Ayala, Brenda, Backus, Mark, Walton, Jessica, Baboud, Julien, Berton, Dominique L., Nicholls, Matthew C., Srinivasan, Deepak, Raman, Rohini, Girshik, Stanley, Kigonya, Peter A., Alonso, Shelley, Sanbhadti, Rashmi N., Barletta, Sean P., Greene, John M., Pot, David A., Bandarchi-Chamkhaleh, Bizhan, Boyd, Jeff, Weaver, JoEllen, Azodo, Ijeoma A., Tomaszek, Sandra C., Christine Aubry, Marie, Ida, Christiane M., Brock, Malcolm V., Rogers, Kristen, Rutledge, Marian, Brown, Travis, Lee, Beverly, Shin, James, Trusty, Dante, Dhir, Rajiv, Siegfried, Jill M., Potapova, Olga, Fedosenko, Konstantin V., Nemirovich-Danchenko, Elena, Zakowski, Maureen, Iacocca, Mary V., Brown, Jennifer, Rabeno, Brenda, Czerwinski, Christine, Petrelli, Nicholas, Fan, Zhen, Todaro, Nicole, Eckman, John, Rathmell, Kimryn W., Thorne, Leigh B., Huang, Mei, Boice, Lori, Hill, Ashley, Curley, Erin, Morrison, Carl, Gaudioso, Carmelo, Bartlett, John M. S., Kodeeswaran, Sugy, Zanke, Brent, Sekhon, Harman, David, Kerstin, Juhl, Hartmut, Van Le, Xuan, Kohl, Bernard, Thorp, Richard, Viet Tien, Nguyen, Van Bang, Nguyen, Sussman, Howard, Duc Phu, Bui, Hajek, Richard, Phi Hung, Nguyen, Khan, Khurram Z., Muley, Thomas, Mills Shaw, Kenna R., Sheth, Margi, Yang, Liming, Buetow, Ken, Davidsen, Tanja, Demchok, John A., Eley, Greg, Ferguson, Martin, Dillon, Laura A. L., Schaefer, Carl, Guyer, Mark S., Ozenberger, Bradley A., Palchik, Jacqueline D., Peterson, Jane, Sofia, Heidi J., Thomson, Elizabeth, and Johnson, Bruce E.
- Published
- 2012
- Full Text
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5. Interpreter of maladies: redescription mining applied to biomedical data analysis
- Author
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Waltman, Peter, Pearlman, Alex, and Mishra, Bud
- Published
- 2006
- Full Text
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6. Prokaryotic Systems Biology
- Author
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Kacmarczyk, Thadeous, primary, Waltman, Peter, additional, and Bonneau, Richard, additional
- Published
- 2018
- Full Text
- View/download PDF
7. Prokaryotic Systems Biology
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Kacmarczyk, Thadeous, primary, Waltman, Peter, additional, and Bonneau, Richard, additional
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8. The Somatic Genomic Landscape of Glioblastoma
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Brennan, Cameron W., primary, Verhaak, Roel G.W., additional, McKenna, Aaron, additional, Campos, Benito, additional, Noushmehr, Houtan, additional, Salama, Sofie R., additional, Zheng, Siyuan, additional, Chakravarty, Debyani, additional, Sanborn, J. Zachary, additional, Berman, Samuel H., additional, Beroukhim, Rameen, additional, Bernard, Brady, additional, Wu, Chang-Jiun, additional, Genovese, Giannicola, additional, Shmulevich, Ilya, additional, Barnholtz-Sloan, Jill, additional, Zou, Lihua, additional, Vegesna, Rahulsimham, additional, Shukla, Sachet A., additional, Ciriello, Giovanni, additional, Yung, W.K., additional, Zhang, Wei, additional, Sougnez, Carrie, additional, Mikkelsen, Tom, additional, Aldape, Kenneth, additional, Bigner, Darell D., additional, Van Meir, Erwin G., additional, Prados, Michael, additional, Sloan, Andrew, additional, Black, Keith L., additional, Eschbacher, Jennifer, additional, Finocchiaro, Gaetano, additional, Friedman, William, additional, Andrews, David W., additional, Guha, Abhijit, additional, Iacocca, Mary, additional, O’Neill, Brian P., additional, Foltz, Greg, additional, Myers, Jerome, additional, Weisenberger, Daniel J., additional, Penny, Robert, additional, Kucherlapati, Raju, additional, Perou, Charles M., additional, Hayes, D. Neil, additional, Gibbs, Richard, additional, Marra, Marco, additional, Mills, Gordon B., additional, Lander, Eric, additional, Spellman, Paul, additional, Wilson, Richard, additional, Sander, Chris, additional, Weinstein, John, additional, Meyerson, Matthew, additional, Gabriel, Stacey, additional, Laird, Peter W., additional, Haussler, David, additional, Getz, Gad, additional, Chin, Lynda, additional, Benz, Christopher, additional, Barrett, Wendi, additional, Ostrom, Quinn, additional, Wolinsky, Yingli, additional, Bose, Bikash, additional, Boulos, Paul T., additional, Boulos, Madgy, additional, Brown, Jenn, additional, Czerinski, Christine, additional, Eppley, Matthew, additional, Kempista, Thelma, additional, Kitko, Teresa, additional, Koyfman, Yakov, additional, Rabeno, Brenda, additional, Rastogi, Pawan, additional, Sugarman, Michael, additional, Swanson, Patricia, additional, Yalamanchii, Kennedy, additional, Otey, Ilana P., additional, Liu, Yingchun Spring, additional, Xiao, Yonghong, additional, Auman, J.Todd, additional, Chen, Peng-Chieh, additional, Hadjipanayis, Angela, additional, Lee, Eunjung, additional, Lee, Semin, additional, Park, Peter J., additional, Seidman, Jonathan, additional, Yang, Lixing, additional, Kalkanis, Steven, additional, Poisson, Laila M., additional, Raghunathan, Aditya, additional, Scarpace, Lisa, additional, Bressler, Ryan, additional, Eakin, Andrea, additional, Iype, Lisa, additional, Kreisberg, Richard B., additional, Leinonen, Kalle, additional, Reynolds, Sheila, additional, Rovira, Hector, additional, Thorsson, Vesteinn, additional, Annala, Matti J., additional, Paulauskis, Joseph, additional, Curley, Erin, additional, Hatfield, Martha, additional, Mallery, David, additional, Morris, Scott, additional, Shelton, Troy, additional, Shelton, Candace, additional, Sherman, Mark, additional, Yena, Peggy, additional, Cuppini, Lucia, additional, DiMeco, Francesco, additional, Eoli, Marica, additional, Maderna, Emanuela, additional, Pollo, Bianca, additional, Saini, Marco, additional, Balu, Saianand, additional, Hoadley, Katherine A., additional, Li, Ling, additional, Miller, C. Ryan, additional, Shi, Yan, additional, Topal, Michael D., additional, Wu, Junyuan, additional, Dunn, Gavin, additional, Giannini, Caterina, additional, O'Neill, Brian P., additional, Aksoy, B. Arman, additional, Antipin, Yevgeniy, additional, Borsu, Laetitia, additional, Brennan, Cameron W., additional, Cerami, Ethan, additional, Gao, Jianjiong, additional, Gross, Benjamin, additional, Jacobsen, Anders, additional, Ladanyi, Marc, additional, Lash, Alex, additional, Liang, Yupu, additional, Reva, Boris, additional, Schultz, Nikolaus, additional, Shen, Ronglai, additional, Socci, Nicholas D., additional, Viale, Agnes, additional, Ferguson, Martin L., additional, Chen, Qing-Rong, additional, Demchok, John A., additional, Dillon, Laura A.L., additional, Shaw, Kenna R. Mills, additional, Sheth, Margi, additional, Tarnuzzer, Roy, additional, Wang, Zhining, additional, Yang, Liming, additional, Davidsen, Tanja, additional, Guyer, Mark S., additional, Ozenberger, Bradley A., additional, Sofia, Heidi J., additional, Bergsten, Julie, additional, Eckman, John, additional, Harr, Jodi, additional, Smith, Christine, additional, Tucker, Kelly, additional, Winemiller, Cindy, additional, Zach, Leigh Anne, additional, Ljubimova, Julia Y., additional, Eley, Greg, additional, Ayala, Brenda, additional, Jensen, Mark A., additional, Kahn, Ari, additional, Pihl, Todd D., additional, Pot, David A., additional, Wan, Yunhu, additional, Hansen, Nathan, additional, Hothi, Parvi, additional, Lin, Biaoyang, additional, Shah, Nameeta, additional, Yoon, Jae-geun, additional, Lau, Ching, additional, Berens, Michael, additional, Ardlie, Kristin, additional, Carter, Scott L., additional, Cherniack, Andrew D., additional, Noble, Mike, additional, Cho, Juok, additional, Cibulskis, Kristian, additional, DiCara, Daniel, additional, Frazer, Scott, additional, Gabriel, Stacey B., additional, Gehlenborg, Nils, additional, Gentry, Jeff, additional, Heiman, David, additional, Kim, Jaegil, additional, Jing, Rui, additional, Lander, Eric S., additional, Lawrence, Michael, additional, Lin, Pei, additional, Mallard, Will, additional, Onofrio, Robert C., additional, Saksena, Gordon, additional, Schumacher, Steve, additional, Stojanov, Petar, additional, Tabak, Barbara, additional, Voet, Doug, additional, Zhang, Hailei, additional, Dees, Nathan N., additional, Ding, Li, additional, Fulton, Lucinda L., additional, Fulton, Robert S., additional, Kanchi, Krishna-Latha, additional, Mardis, Elaine R., additional, Wilson, Richard K., additional, Baylin, Stephen B., additional, Harshyne, Larry, additional, Cohen, Mark L., additional, Devine, Karen, additional, Sloan, Andrew E., additional, VandenBerg, Scott R., additional, Berger, Mitchel S., additional, Carlin, Daniel, additional, Craft, Brian, additional, Ellrott, Kyle, additional, Goldman, Mary, additional, Goldstein, Theodore, additional, Grifford, Mia, additional, Ma, Singer, additional, Ng, Sam, additional, Stuart, Joshua, additional, Swatloski, Teresa, additional, Waltman, Peter, additional, Zhu, Jing, additional, Foss, Robin, additional, Frentzen, Barbara, additional, McTiernan, Raquel, additional, Yachnis, Anthony, additional, Mao, Yong, additional, Akbani, Rehan, additional, Bogler, Oliver, additional, Fuller, Gregory N., additional, Liu, Wenbin, additional, Liu, Yuexin, additional, Lu, Yiling, additional, Mills, Gordon, additional, Protopopov, Alexei, additional, Ren, Xiaojia, additional, Sun, Youting, additional, Yung, W.K. Alfred, additional, Zhang, Jianhua, additional, Chen, Ken, additional, Weinstein, John N., additional, Bootwalla, Moiz S., additional, Lai, Phillip H., additional, Triche, Timothy J., additional, Van Den Berg, David J., additional, Gutmann, David H., additional, Lehman, Norman L., additional, VanMeir, Erwin G., additional, Brat, Daniel, additional, Olson, Jeffrey J., additional, Mastrogianakis, Gena M., additional, Devi, Narra S., additional, Zhang, Zhaobin, additional, Bigner, Darell, additional, Lipp, Eric, additional, and McLendon, Roger, additional
- Published
- 2013
- Full Text
- View/download PDF
9. Comparative Microbial Modules Resource: Generation and Visualization of Multi-species Biclusters
- Author
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Kacmarczyk, Thadeous, primary, Waltman, Peter, additional, Bate, Ashley, additional, Eichenberger, Patrick, additional, and Bonneau, Richard, additional
- Published
- 2011
- Full Text
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10. Multi-species integrative biclustering
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Waltman, Peter, primary, Kacmarczyk, Thadeous, additional, Bate, Ashley R, additional, Kearns, Daniel B, additional, Reiss, David J, additional, Eichenberger, Patrick, additional, and Bonneau, Richard, additional
- Published
- 2010
- Full Text
- View/download PDF
11. FiberID—A technique to identify fibrous protein subclasses
- Author
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Waltman, Peter, primary, Blumer, Anselm, additional, and Kaplan, David, additional
- Published
- 2006
- Full Text
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12. FiberID-A technique to identify fibrous protein subclasses.
- Author
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Waltman, Peter, Blumer, Anselm, and Kaplan, David
- Abstract
Fibrous proteins such as collagen, silk, and elastin play critical biological roles, yet they have been the subject of few projects that use computational techniques to predict either their class or their structure. In this article, we present FiberID, a simple yet effective method for identifying and distinguishing three fibrous protein subclasses from their primary sequences. Using a combination of amino acid composition and fast Fourier measurements, FiberID can classify fibrous proteins belonging to these subclasses with high accuracy by using two standard machine learning techniques (decision trees and Naïve Bayesian classifiers). After presenting our results, we present several fibrous sequences that are regularly misclassified by FiberID as sequences of potential interest for further study. Finally, we analyze the decision trees developed by FiberID for potential insights regarding the structure of these proteins. Proteins 2007. © 2006 Wiley-Liss, Inc. [ABSTRACT FROM AUTHOR]
- Published
- 2007
- Full Text
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