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Graph Neural Networks (GNNs) have demonstrated remarkable effectiveness in various graph representation learning tasks. However, most existing GNNs focus primarily on capturing local information through explicit graph convolution, often neglecting global message-passing. This limitation hinders the establishment of a collaborative interaction between global and local information, which is crucial for comprehensively understanding graph data. To address these challenges, we propose a novel framework called Comprehensive Graph Representation Learning (ComGRL). ComGRL integrates local information into global information to derive powerful representations. It achieves this by implicitly smoothing local information through flexible graph contrastive learning, ensuring reliable representations for subsequent global exploration. Then ComGRL transfers the locally derived representations to a multi-head self-attention module, enhancing their discriminative ability by uncovering diverse and rich global correlations. To further optimize local information dynamically under the self-supervision of pseudo-labels, ComGRL employs a triple sampling strategy to construct mixed node pairs and applies reliable Mixup augmentation across attributes and structure for local contrastive learning. This approach broadens the receptive field and facilitates coordination between local and global representation learning, enabling them to reinforce each other. Experimental results across six widely used graph datasets demonstrate that ComGRL achieves excellent performance in node classification tasks. The code could be available at https://github.com/JinluWang1002/ComGRL., Comment: 9 pages, 2 figures

Radiology report generation (RRG) models typically focus on individual exams, often overlooking the integration of historical visual or textual data, which is crucial for patient follow-ups. Traditional methods usually struggle with long sequence dependencies when incorporating historical information, but large language models (LLMs) excel at in-context learning, making them well-suited for analyzing longitudinal medical data. In light of this, we propose a novel Historical-Constrained Large Language Models (HC-LLM) framework for RRG, empowering LLMs with longitudinal report generation capabilities by constraining the consistency and differences between longitudinal images and their corresponding reports. Specifically, our approach extracts both time-shared and time-specific features from longitudinal chest X-rays and diagnostic reports to capture disease progression. Then, we ensure consistent representation by applying intra-modality similarity constraints and aligning various features across modalities with multimodal contrastive and structural constraints. These combined constraints effectively guide the LLMs in generating diagnostic reports that accurately reflect the progression of the disease, achieving state-of-the-art results on the Longitudinal-MIMIC dataset. Notably, our approach performs well even without historical data during testing and can be easily adapted to other multimodal large models, enhancing its versatility., Comment: Accepted by AAAI2025

Knowledge Graph Query Embedding (KGQE) aims to embed First-Order Logic (FOL) queries in a low-dimensional KG space for complex reasoning over incomplete KGs. To enhance the generalization of KGQE models, recent studies integrate various external information (such as entity types and relation context) to better capture the logical semantics of FOL queries. The whole process is commonly referred to as Query Pattern Learning (QPL). However, current QPL methods typically suffer from the pattern-entity alignment bias problem, leading to the learned defective query patterns limiting KGQE models' performance. To address this problem, we propose an effective Query Instruction Parsing Plugin (QIPP) that leverages the context awareness of Pre-trained Language Models (PLMs) to capture latent query patterns from code-like query instructions. Unlike the external information introduced by previous QPL methods, we first propose code-like instructions to express FOL queries in an alternative format. This format utilizes textual variables and nested tuples to convey the logical semantics within FOL queries, serving as raw materials for a PLM-based instruction encoder to obtain complete query patterns. Building on this, we design a query-guided instruction decoder to adapt query patterns to KGQE models. To further enhance QIPP's effectiveness across various KGQE models, we propose a query pattern injection mechanism based on compressed optimization boundaries and an adaptive normalization component, allowing KGQE models to utilize query patterns more efficiently. Extensive experiments demonstrate that our plug-and-play method improves the performance of eight basic KGQE models and outperforms two state-of-the-art QPL methods.

Attributed Question Answering (AQA) aims to provide both a trustworthy answer and a reliable attribution report for a given question. Retrieval is a widely adopted approach, including two general paradigms: Retrieval-Then-Read (RTR) and post-hoc retrieval. Recently, Large Language Models (LLMs) have shown remarkable proficiency, prompting growing interest in AQA among researchers. However, RTR-based AQA often suffers from irrelevant knowledge and rapidly changing information, even when LLMs are adopted, while post-hoc retrieval-based AQA struggles with comprehending long-form answers with complex logic, and precisely identifying the content needing revision and preserving the original intent. To tackle these problems, this paper proposes an Atomic fact decomposition-based Retrieval and Editing (ARE) framework, which decomposes the generated long-form answers into molecular clauses and atomic facts by the instruction-tuned LLMs. Notably, the instruction-tuned LLMs are fine-tuned using a well-constructed dataset, generated from large scale Knowledge Graphs (KGs). This process involves extracting one-hop neighbors from a given set of entities and transforming the result into coherent long-form text. Subsequently, ARE leverages a search engine to retrieve evidences related to atomic facts, inputting these evidences into an LLM-based verifier to determine whether the facts require expansion for re-retrieval or editing. Furthermore, the edited facts are backtracked into the original answer, with evidence aggregated based on the relationship between molecular clauses and atomic facts. Extensive evaluations demonstrate the superior performance of our proposed method over the state-of-the-arts on several datasets, with an additionally proposed new metric $Attr_{p}$ for evaluating the precision of evidence attribution.

Conventional Knowledge graph completion (KGC) methods aim to infer missing information in incomplete Knowledge Graphs (KGs) by leveraging existing information, which struggle to perform effectively in scenarios involving emerging entities. Inductive KGC methods can handle the emerging entities and relations in KGs, offering greater dynamic adaptability. While existing inductive KGC methods have achieved some success, they also face challenges, such as susceptibility to noisy structural information during reasoning and difficulty in capturing long-range dependencies in reasoning paths. To address these challenges, this paper proposes the Query-Enhanced Adaptive Semantic Path Reasoning (QASPR) framework, which simultaneously captures both the structural and semantic information of KGs to enhance the inductive KGC task. Specifically, the proposed QASPR employs a query-dependent masking module to adaptively mask noisy structural information while retaining important information closely related to the targets. Additionally, QASPR introduces a global semantic scoring module that evaluates both the individual contributions and the collective impact of nodes along the reasoning path within KGs. The experimental results demonstrate that QASPR achieves state-of-the-art performance.

Temporal Knowledge Graph Reasoning (TKGR) is the process of utilizing temporal information to capture complex relations within a Temporal Knowledge Graph (TKG) to infer new knowledge. Conventional methods in TKGR typically depend on deep learning algorithms or temporal logical rules. However, deep learning-based TKGRs often lack interpretability, whereas rule-based TKGRs struggle to effectively learn temporal rules that capture temporal patterns. Recently, Large Language Models (LLMs) have demonstrated extensive knowledge and remarkable proficiency in temporal reasoning. Consequently, the employment of LLMs for Temporal Knowledge Graph Reasoning (TKGR) has sparked increasing interest among researchers. Nonetheless, LLMs are known to function as black boxes, making it challenging to comprehend their reasoning process. Additionally, due to the resource-intensive nature of fine-tuning, promptly updating LLMs to integrate evolving knowledge within TKGs for reasoning is impractical. To address these challenges, in this paper, we propose a Large Language Models-guided Dynamic Adaptation (LLM-DA) method for reasoning on TKGs. Specifically, LLM-DA harnesses the capabilities of LLMs to analyze historical data and extract temporal logical rules. These rules unveil temporal patterns and facilitate interpretable reasoning. To account for the evolving nature of TKGs, a dynamic adaptation strategy is proposed to update the LLM-generated rules with the latest events. This ensures that the extracted rules always incorporate the most recent knowledge and better generalize to the predictions on future events. Experimental results show that without the need of fine-tuning, LLM-DA significantly improves the accuracy of reasoning over several common datasets, providing a robust framework for TKGR tasks.

Temporal Knowledge Graphs (TKGs) incorporate a temporal dimension, allowing for a precise capture of the evolution of knowledge and reflecting the dynamic nature of the real world. Typically, TKGs contain complex geometric structures, with various geometric structures interwoven. However, existing Temporal Knowledge Graph Completion (TKGC) methods either model TKGs in a single space or neglect the heterogeneity of different curvature spaces, thus constraining their capacity to capture these intricate geometric structures. In this paper, we propose a novel Integrating Multi-curvature shared and specific Embedding (IME) model for TKGC tasks. Concretely, IME models TKGs into multi-curvature spaces, including hyperspherical, hyperbolic, and Euclidean spaces. Subsequently, IME incorporates two key properties, namely space-shared property and space-specific property. The space-shared property facilitates the learning of commonalities across different curvature spaces and alleviates the spatial gap caused by the heterogeneous nature of multi-curvature spaces, while the space-specific property captures characteristic features. Meanwhile, IME proposes an Adjustable Multi-curvature Pooling (AMP) approach to effectively retain important information. Furthermore, IME innovatively designs similarity, difference, and structure loss functions to attain the stated objective. Experimental results clearly demonstrate the superior performance of IME over existing state-of-the-art TKGC models.

Temporal characteristics are prominently evident in a substantial volume of knowledge, which underscores the pivotal role of Temporal Knowledge Graphs (TKGs) in both academia and industry. However, TKGs often suffer from incompleteness for three main reasons: the continuous emergence of new knowledge, the weakness of the algorithm for extracting structured information from unstructured data, and the lack of information in the source dataset. Thus, the task of Temporal Knowledge Graph Completion (TKGC) has attracted increasing attention, aiming to predict missing items based on the available information. In this paper, we provide a comprehensive review of TKGC methods and their details. Specifically, this paper mainly consists of three components, namely, 1)Background, which covers the preliminaries of TKGC methods, loss functions required for training, as well as the dataset and evaluation protocol; 2)Interpolation, that estimates and predicts the missing elements or set of elements through the relevant available information. It further categorizes related TKGC methods based on how to process temporal information; 3)Extrapolation, which typically focuses on continuous TKGs and predicts future events, and then classifies all extrapolation methods based on the algorithms they utilize. We further pinpoint the challenges and discuss future research directions of TKGC.

Large language models (LLMs), such as ChatGPT and GPT4, are making new waves in the field of natural language processing and artificial intelligence, due to their emergent ability and generalizability. However, LLMs are black-box models, which often fall short of capturing and accessing factual knowledge. In contrast, Knowledge Graphs (KGs), Wikipedia and Huapu for example, are structured knowledge models that explicitly store rich factual knowledge. KGs can enhance LLMs by providing external knowledge for inference and interpretability. Meanwhile, KGs are difficult to construct and evolving by nature, which challenges the existing methods in KGs to generate new facts and represent unseen knowledge. Therefore, it is complementary to unify LLMs and KGs together and simultaneously leverage their advantages. In this article, we present a forward-looking roadmap for the unification of LLMs and KGs. Our roadmap consists of three general frameworks, namely, 1) KG-enhanced LLMs, which incorporate KGs during the pre-training and inference phases of LLMs, or for the purpose of enhancing understanding of the knowledge learned by LLMs; 2) LLM-augmented KGs, that leverage LLMs for different KG tasks such as embedding, completion, construction, graph-to-text generation, and question answering; and 3) Synergized LLMs + KGs, in which LLMs and KGs play equal roles and work in a mutually beneficial way to enhance both LLMs and KGs for bidirectional reasoning driven by both data and knowledge. We review and summarize existing efforts within these three frameworks in our roadmap and pinpoint their future research directions., Comment: A short version of this paper was accepted by IEEE Transactions on Knowledge and Data Engineering (TKDE)