1. The asymmetric binding of PGC-1α to the ERRα and ERRγ nuclear receptor homodimers involves a similar recognition mechanism
- Author
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François Xavier Ogi, Yassmine Chebaro, Pierre Roblin, Dmitri I. Svergun, Mária Takács, Dino Moras, Isabelle M. L. Billas, Noelle Potier, Annick Dejaegere, Borries Demeler, Maxim V. Petoukhov, R. Andrew Atkinson, Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), European Molecular Biology Laboratory (EMBL), King‘s College London, Département Caractérisation et Elaboration des Produits Issus de l'Agriculture (CEPIA), Institut National de la Recherche Agronomique (INRA), Synchrotron SOLEIL, NanoTemper Technologies GmbH [München], University of Texas Health Science Center, The University of Texas Health Science Center at Houston (UTHealth), Université de Strasbourg (UNISTRA), CNRS, INSERM, the Association pour la Recherche sur le Cancer (ARC), Karo Bio Research Foundation, French Infrastructure for Integrated Structural Biology (FRISBI) [ANR-10-INSB-05-01], Instruct as part of the European Strategy Forum on Research Infrastructures (ESFRI), WeNMR project [261572], BMBF research grant SYNC-LIFE [05K10YEA], ProdInra, Migration, Chimie de la matière complexe (CMC), and Université de Strasbourg (UNISTRA)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Models, Molecular ,Macromolecular Assemblies ,Protein Folding ,Protein Conformation ,Plasma protein binding ,Biochemistry ,Transactivation ,0302 clinical medicine ,Protein structure ,Endocrinology ,X-Ray Diffraction ,Molecular Cell Biology ,Basic Cancer Research ,[SDV.IDA]Life Sciences [q-bio]/Food engineering ,Macromolecular Structure Analysis ,ComputingMilieux_MISCELLANEOUS ,0303 health sciences ,Multidisciplinary ,[SDV.IDA] Life Sciences [q-bio]/Food engineering ,Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alpha ,Cell biology ,Receptors, Estrogen ,Oncology ,Medicine ,ddc:500 ,Protein Binding ,Research Article ,Signal Transduction ,Protein Structure ,[SPI.GPROC] Engineering Sciences [physics]/Chemical and Process Engineering ,Science ,Molecular Sequence Data ,Allosteric regulation ,Biophysics ,Biology ,03 medical and health sciences ,[CHIM.ANAL]Chemical Sciences/Analytical chemistry ,Scattering, Small Angle ,Humans ,Protein Interaction Domains and Motifs ,[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process Engineering ,Amino Acid Sequence ,Protein Interactions ,030304 developmental biology ,Hormone response element ,Microscale thermophoresis ,Cofactors ,Cooperative binding ,Computational Biology ,Proteins ,Hormones ,Protein Subunits ,Nuclear receptor ,Protein Multimerization ,Nuclear Receptor Signaling ,030217 neurology & neurosurgery ,Transcription Factors - Abstract
International audience; Background: PGC-1 alpha is a crucial regulator of cellular metabolism and energy homeostasis that functionally acts together with the estrogen-related receptors (ERR alpha and ERR gamma) in the regulation of mitochondrial and metabolic gene networks. Dimerization of the ERRs is a pre-requisite for interactions with PGC-1 alpha and other coactivators, eventually leading to transactivation. It was suggested recently (Devarakonda et al) that PGC-1 alpha binds in a strikingly different manner to ERR gamma ligand-binding domains (LBDs) compared to its mode of binding to ERR alpha and other nuclear receptors (NRs), where it interacts directly with the two ERR gamma homodimer subunits. Methods/Principal Findings: Here, we show that PGC-1 alpha receptor interacting domain (RID) binds in an almost identical manner to ERR alpha and ERR gamma homodimers. Microscale thermophoresis demonstrated that the interactions between PGC-1 alpha RID and ERR LBDs involve a single receptor subunit through high-affinity, ERR-specific L3 and low-affinity L2 interactions. NMR studies further defined the limits of PGC-1 alpha RID that interacts with ERRs. Consistent with these findings, the solution structures of PGC-1 alpha/ERRa LBDs and PGC-1 alpha/ERRc LBDs complexes share an identical architecture with an asymmetric binding of PGC-1 alpha to homodimeric ERR. Conclusions/Significance: These studies provide the molecular determinants for the specificity of interactions between PGC-1 alpha and the ERRs, whereby negative cooperativity prevails in the binding of the coactivators to these receptors. Our work indicates that allosteric regulation may be a general mechanism controlling the binding of the coactivators to homodimers.
- Published
- 2013
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