586 results on '"Weetman, P."'
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2. Larval source management in Ethiopia: modelling to assess its effectiveness in curbing malaria surge in dire Dawa and Batu Towns
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Ayana, Galana Mamo, Jalilian, Abdollah, Ashine, Temesgen, Molla, Eshetu, Hailemeskel, Elifaged, Yemane, Dagmawi Hailu, Yirgu, Hailegiorgis, Negash, Nigatu, Teferi, Natnael, Teshome, Daniel, Reynolds, Alison M., Weetman, David, Wilson, Anne L., Kenate, Birhanu, Donnelly, Martin J., Sedda, Luigi, and Gadisa, Endalamaw
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- 2024
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3. Waning success: a 2013–2022 spatial and temporal trend analysis of malaria in Ethiopia
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Jalilian, Abdollah, Ayana, Galana Mamo, Ashine, Temesgen, Hailemeskel, Elifaged, Ebstie, Yehenew Asmamaw, Molla, Eshetu, Esayas, Endashaw, Negash, Nigatu, Kochora, Abena, Assefa, Muluken, Teferi, Natnael, Teshome, Daniel, Reynolds, Alison M., Weetman, David, Wilson, Anne L., Kenate, Birhanu, Donnelly, Martin J., Sedda, Luigi, and Gadisa, Endalamaw
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- 2024
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4. Plasticity of blood feeding behavior of Anopheles mosquitoes in Ethiopia: a systematic review
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Ashine, Temesgen, Kochora, Abena, Shibru, Hailu, Bekele, Alemayehu, Assefa, Muluken, Gidisa, Bedasa, Negash, Nigatu, Weetman, David, Ayele, Tadesse Awoke, Gadisa, Endalamaw, and Massebo, Fekadu
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- 2024
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5. Cryptic population structure and insecticide resistance in Anopheles gambiae from the southern Democratic Republic of Congo
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Dennis, Tristan P. W., Pescod, Poppy, Barasa, Sonia, Cerdeira, Louise T., Lucas, Eric R., Clarkson, Chris S., Miles, Alistair, Asidi, Alex, Manzambi, Emile Z., Metelo, Emery, Zanga, Josue, Nsalambi, Steve, Irish, Seth R., Donnelly, Martin James, Agossa, Fiacre, Weetman, David, and Tezzo, Francis Wat’senga
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- 2024
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6. Population genomic evidence of a putative ‘far-west’ African cryptic taxon in the Anopheles gambiae complex
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Caputo, Beniamino, De Marco, Carlo M., Pichler, Verena, Bottà, Giordano, Bennett, Kelly L., Amambua-Ngwa, Alfred, Assogba, Sessinou B., Opondo, Kevin O., Clarkson, Chris S., Tennessen, Jacob A., Weetman, David, Miles, Alistair, and della Torre, Alessandra
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- 2024
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7. Improving patients’, carers’ and primary care healthcare professionals’ experiences of discharge communication from specialist palliative care to community settings: a protocol for a qualitative interview study
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Weetman, Katharine, MacArtney, John I., Grimley, Catherine, Bailey, Cara, and Dale, Jeremy
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- 2024
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8. Genetic markers associated with the widespread insecticide resistance in malaria vector Anopheles funestus populations across Tanzania
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Odero, Joel O., Nambunga, Ismail H., Masalu, John P., Mkandawile, Gustav, Bwanary, Hamis, Hape, Emmanuel E., Njalambaha, Rukiyah M., Tungu, Patrick, Ngowo, Halfan S., Kaindoa, Emmanuel W., Mapua, Salum A., Kahamba, Najat F., Nelli, Luca, Wondji, Charles, Koekemoer, Lizette L., Weetman, David, Ferguson, Heather M., Baldini, Francesco, and Okumu, Fredros O.
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- 2024
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9. Synthesis, characterisation, and catalytic application of a soluble molecular carrier of sodium hydride activated by a substituted 4-(dimethylamino)pyridine
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Macdonald, Peter A., Kennedy, Alan R., Weetman, Catherine E., Robertson, Stuart D., and Mulvey, Robert E.
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- 2024
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10. Signatures of adaptation at key insecticide resistance loci in Anopheles gambiae in Southern Ghana revealed by reduced-coverage WGS
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Dennis, Tristan P. W., Essandoh, John, Mable, Barbara K., Viana, Mafalda S., Yawson, Alexander E., and Weetman, David.
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- 2024
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11. Spatiotemporal distribution and bionomics of Anopheles stephensi in different eco-epidemiological settings in Ethiopia
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Ashine, Temesgen, Eyasu, Adane, Asmamaw, Yehenew, Simma, Eba, Zemene, Endalew, Epstein, Adrienne, Brown, Rebecca, Negash, Nigatu, Kochora, Abena, Reynolds, Alison M., Bulto, Mikiyas Gebremichael, Tafesse, Temesgen, Dagne, Alemayehu, Lukus, Biniyam, Esayas, Endashaw, Behaksra, Sinknesh Wolde, Woldekidan, Kidist, Kassa, Fikregabrail Aberra, Deressa, Jimma Dinsa, Assefa, Muluken, Dillu, Dereje, Assefa, Gudissa, Solomon, Hiwot, Zeynudin, Ahmed, Massebo, Fekadu, Sedda, Luigi, Donnelly, Martin James, Wilson, Anne L., Weetman, David, Gadisa, Endalamaw, and Yewhalaw, Delenasaw
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- 2024
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12. Kdr genotyping and the first report of V410L and V1016I kdr mutations in voltage-gated sodium channel gene in Aedes aegypti (Diptera: Culicidae) from Iran
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Enayati, Ahmadali, Valadan, Reza, Bagherzadeh, Mahboobeh, Cheraghpour, Mohammad, Nikookar, Seyed Hassan, Fazeli-Dinan, Mahmoud, Hosseini-Vasoukolaei, Nasibeh, Sahraei Rostami, Farzaneh, Shabani Kordshouli, Razieh, Raeisi, Ahmad, Nikpour, Fatemeh, Mirolyaei, Abdolreza, Bagheri, Fatemeh, Sedaghat, Mohammad Mehdi, Zaim, Morteza, Weetman, David, and Hemigway, Janet
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- 2024
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13. Larval source management in Ethiopia: modelling to assess its effectiveness in curbing malaria surge in dire Dawa and Batu Towns
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Galana Mamo Ayana, Abdollah Jalilian, Temesgen Ashine, Eshetu Molla, Elifaged Hailemeskel, Dagmawi Hailu Yemane, Hailegiorgis Yirgu, Nigatu Negash, Natnael Teferi, Daniel Teshome, Alison M. Reynolds, David Weetman, Anne L. Wilson, Birhanu Kenate, Martin J. Donnelly, Luigi Sedda, and Endalamaw Gadisa
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Malaria ,Larval ,Bti ,Source reduction ,Interruption ,Time series ,Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Ethiopia faces several severe challenges in terms of malaria elimination, including drug resistance and diagnostic evasion in the Plasmodium falciparum parasite, insecticide resistance in the primary Anopheles malaria vector, and, most recently, the invasion of the Asian malaria vector Anopheles stephensi. Novel malaria control methods are therefore needed, and in this paper, we describe the evaluation of a larval source management (LSM) strategy implemented in response to An. stephensi. The primary outcome was the malaria incidence rate compared between intervention and non-intervention sites in the presence of An. stephensi. Methods Intervention (Batu and Dire Dawa) and control (Metehara) towns were selected, and weekly malaria passive case detection data collected between 2014 and 2023 were obtained from the Oromia regional state and Dire Dawa City Administration Health Bureau. In addition, data regarding intervention were obtained from the President’s Malaria Initiative (PMI) reports. Weekly malaria passive case data were used to evaluate the change in the estimated malaria incidence rate and trends of temporal patterns of the estimated malaria incidence rate before and after interventions. An interrupted time series model with a cyclic second-order random walk structure periodic seasonal term was used to assess the impact of LSM on malaria incidence rate in the intervention and control settings. Results An upsurge in malaria cases occurred after 2020 at both the intervention and control sites. The temporal patterns of malaria incidence rate showed an increasing trend after the intervention. The ITS model depicted that the LSM has no impact in reducing the malaria incidence rate at both intervention site Dire Dawa [immediate impact = 1.462 (0.891, 2.035)], [Lasting impact = 0.003 (− 0.012, 0.018)], and Batu [Immediate impact 0.007 (− 0.235, 0.249), [Lasting impact = 0.008 (− 0.003, 0.013)]. Conclusions An overall increasing trend in the malaria incidence rate was observed irrespective of the implementation of LSM in the urban settings of Ethiopia, where An. stephensi has been found. Further investigations and validations of the incorporation of LSM into control activities are warranted.
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- 2024
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14. Cryptic population structure and insecticide resistance in Anopheles gambiae from the southern Democratic Republic of Congo
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Tristan P. W. Dennis, Poppy Pescod, Sonia Barasa, Louise T. Cerdeira, Eric R. Lucas, Chris S. Clarkson, Alistair Miles, Alex Asidi, Emile Z. Manzambi, Emery Metelo, Josue Zanga, Steve Nsalambi, Seth R. Irish, Martin James Donnelly, Fiacre Agossa, David Weetman, and Francis Wat’senga Tezzo
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Insecticide resistance ,WGS ,Malaria ,Population genomics ,Anopheles gambiae complex ,Medicine ,Science - Abstract
Abstract The Democratic Republic of Congo (DRC) suffers from one of the highest malaria burdens worldwide, but information on its Anopheles vector populations is relatively limited. Preventative malaria control in DRC is reliant on pyrethroid-treated nets, raising concerns over the potential impacts of insecticide resistance. We sampled Anopheles gambiae from three geographically distinct populations (Kimpese, Kapolowe and Mikalayi) in southern DRC, collecting from three sub-sites per population and characterising mosquito collections from each for resistance to pyrethroids using WHO tube bioassays. Resistance to each of three different pyrethroids was generally high in An. gambiae with
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- 2024
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15. Plasticity of blood feeding behavior of Anopheles mosquitoes in Ethiopia: a systematic review
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Temesgen Ashine, Abena Kochora, Hailu Shibru, Alemayehu Bekele, Muluken Assefa, Bedasa Gidisa, Nigatu Negash, David Weetman, Tadesse Awoke Ayele, Endalamaw Gadisa, and Fekadu Massebo
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Anopheles mosquitoes ,Blood meal source ,Host preference ,Blood-feeding behavior ,Ethiopia ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background The efficacy of vector control tools depends on the behavior of the vector species. Many studies have sought to determine the feeding behavior of Anopheles mosquitoes in different settings of Ethiopia. We have performed a systematic review aimed to generate pooled evidence on the overall and species-specific blood meal sources of Anopheles mosquitoes in Ethiopia. Methods A search for relevant articles was performed in two electronic databases (PubMed and Science Direct) and three search engines (Google Scholar, Research Gate and Google) between 11 March and 2 April 2024. Following the initial identification of articles, we used EndNote X8 software and removed duplicate articles and screened the remaining articles by careful reading of their titles and abstracts. The full text of articles that passed this screening phase was retrieved, read and evaluated against predetermined selection criteria. The final decision for inclusion in the systematic review was made after a methodological quality check using the JBI critical appraisal checklist. All relevant data were extracted from tables, figures and texts of the included articles using a premade template in Excel, and the data were analyzed using Stata version 14 software. Results Of the 2431 studies identified, 27 met the inclusion criteria; all were published between 1997 and 2024. At 215 data points (frequency of tests of each Anopheles species by location and method of mosquito collections), 18,771 Anopheles mosquitoes belonging to 23 species or species complexes were tested for blood meal sources. The commonest sources of blood meals for Anopheles mosquitoes were bovine (36.0%, n = 6758) and human (29.4%, n = 5520). Among the tested anophelines, Anopheles (An.) arabiensis accounted for 67.9% (n = 12,741), followed by An. pharoensis, An. demeilloni and An. stephensi at 10.0%, 5.6% and 4.4%, respectively. Overall, there was no difference in the mean proportion of An. arabiensis detected with domestic animal blood (33.4%, 95% confidence interval [CI] 32.4–34.4%) and those detected with human blood (31.8%, 95% CI 30.9–32.8%). However, a greater proportion of the outdoor collected An. arabiensis were found to feed on bovines (47.9%, 95% CI 35.3–60.6) compared to humans (12.9%, 95% CI 0.8–24.9, P
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- 2024
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16. Population genomic evidence of a putative ‘far-west’ African cryptic taxon in the Anopheles gambiae complex
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Beniamino Caputo, Carlo M. De Marco, Verena Pichler, Giordano Bottà, Kelly L. Bennett, Alfred Amambua-Ngwa, Sessinou B. Assogba, Kevin O. Opondo, Chris S. Clarkson, Jacob A. Tennessen, David Weetman, Alistair Miles, and Alessandra della Torre
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Biology (General) ,QH301-705.5 - Abstract
Abstract The two main Afrotropical malaria vectors - Anopheles coluzzii and An. gambiae – are genetically distinct and reproductively isolated across West Africa. However, populations at the western extreme of their range are assigned as “intermediate” between the two species by whole genome sequence (WGS) data, and as hybrid forms by conventional molecular diagnostics. By exploiting WGS data from 1190 specimens collected across west Africa via the Anopheles gambiae 1000 Genomes network, we identified a putative taxon in the far-west (provisionally named Bissau molecular form), which did not arise by admixture but rather may have originated at the same time as the split between An. coluzzii and An. gambiae. Intriguingly, this taxon lacks insecticide resistance mechanisms commonly observed in the two main species. These findings lead to a change of perspective on malaria vector species in the far-west region with potential for epidemiological implications, and a new challenge for genetic-based mosquito control approaches.
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- 2024
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17. Copy number variants underlie major selective sweeps in insecticide resistance genes in Anopheles arabiensis.
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Eric R Lucas, Sanjay C Nagi, Bilali Kabula, Bernard Batengana, William Kisinza, Alexander Egyir-Yawson, John Essandoh, Sam Dadzie, Joseph Chabi, Arjen E Van't Hof, Emily J Rippon, Dimitra Pipini, Nicholas J Harding, Naomi A Dyer, Chris S Clarkson, Alistair Miles, David Weetman, and Martin J Donnelly
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Biology (General) ,QH301-705.5 - Abstract
To keep ahead of the evolution of resistance to insecticides in mosquitoes, national malaria control programmes must make use of a range of insecticides, both old and new, while monitoring resistance mechanisms. The outdoor-biting malaria vector Anopheles arabiensis is of increasing concern for malaria transmission because it is apparently less susceptible to many indoor control interventions, yet knowledge of its mechanisms of resistance remains limited. Furthermore, comparatively little is known in general about resistance to non-pyrethroid insecticides such as pirimiphos-methyl (PM), which are crucial for effective control in the context of globally high resistance to pyrethroids. We performed a genome-wide association study to determine the molecular mechanisms of resistance to the pyrethroid deltamethrin (commonly used in bednets) and PM (widespread use for indoor spraying), in An. arabiensis from 2 regions in Tanzania. Genomic regions of positive selection in these populations were largely driven by copy number variants (CNVs) in gene families involved in metabolic resistance. We found evidence of a new gene cluster involved in resistance to PM, identifying a strong selective sweep tied to a CNV in the carboxylesterase genes Coeae2g - Coeae6g. Using complementary data from another malaria vector, An. coluzzii, in Ghana, we show that copy number at this locus is significantly associated with PM resistance. Similarly, for deltamethrin, resistance was strongly associated with a novel CNV allele in the Cyp6aa / Cyp6p cluster (Cyp6aap_Dup33). Against this background of metabolic resistance, resistance caused by mutations in the insecticide target sites was very rare or absent. Mutations in the pyrethroid target site Vgsc were at very low frequency in Tanzania, yet combining these samples with 3 An. arabiensis individuals from West Africa revealed a startling evolutionary diversity, with up to 5 independent origins of Vgsc-995 mutations found within just 8 haplotypes. Thus, despite having been first recorded over 10 years ago, Vgsc resistance mutations in Tanzanian An. arabiensis have remained at stable low frequencies. Overall, our results provide a new copy number marker for monitoring resistance to PM in malaria mosquitoes, and reveal the complex picture of resistance patterns in An. arabiensis.
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- 2024
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18. Improving patients’, carers’ and primary care healthcare professionals’ experiences of discharge communication from specialist palliative care to community settings: a protocol for a qualitative interview study
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Katharine Weetman, John I. MacArtney, Catherine Grimley, Cara Bailey, and Jeremy Dale
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Palliative care ,Hospice care ,Patient discharge summaries ,Transitional care ,Communication ,Special situations and conditions ,RC952-1245 - Abstract
Abstract Background Patients who have benefited from specialist intervention during periods of acute/complex palliative care needs often transition from specialist-to-primary care once such needs have been controlled. Effective communication between services is central to co-ordination of care to avoid the potential consequences of unmet needs, fragmented care, and poor patient and family experience. Discharge communications are a key component of care transitions. However, little is known about the experiences of those primarily receiving these communications, to include patients’, carers’ and primary care healthcare professionals. This study aims to have a better understanding of how the discharge communications from specialist palliative care services to primary care are experienced by patients, carers, and healthcare professionals, and how these communications might be improved to support effective patient-centred care. Methods This is a 15-month qualitative study. We will interview 30 adult patients and carers and 15 healthcare professionals (n = 45). We will seek a range of experiences of discharge communication by using a maximum variation approach to sampling, including purposively recruiting people from a range of demographic backgrounds from 4–6 specialist palliative care services (hospitals and hospices) as well as 5–7 general practices. Interview data will be analysed using a reflexive thematic approach and will involve input from the research and advisory team. Working with clinicians, commissioners, and PPI representatives we will co-produce a list of recommendations for discharge communication from specialist palliative care. Discussion Data collection may be limited by the need to be sensitive to participants’ wellbeing needs. Study findings will be shared through academic publications and presentations. We will draft principles for how specialist palliative care clinicians can best communicate discharge with patients, carers, and primary care clinicians. These will be shared with clinicians, policy makers, commissioners, and PPI representatives and key stakeholders and organisations (e.g. Hospice UK) and on social media. Key outputs will be recommendations for a specialist palliative care discharge proforma. Trial registration Registered in ISRCTN Registry on 29.12.2023 ref: ISRCTN18098027.
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- 2024
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19. Genetic markers associated with the widespread insecticide resistance in malaria vector Anopheles funestus populations across Tanzania
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Joel O. Odero, Ismail H. Nambunga, John P. Masalu, Gustav Mkandawile, Hamis Bwanary, Emmanuel E. Hape, Rukiyah M. Njalambaha, Patrick Tungu, Halfan S. Ngowo, Emmanuel W. Kaindoa, Salum A. Mapua, Najat F. Kahamba, Luca Nelli, Charles Wondji, Lizette L. Koekemoer, David Weetman, Heather M. Ferguson, Francesco Baldini, and Fredros O. Okumu
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Insecticide resistance ,Anopheles funestus ,CYP6P9a/b ,L119F-GSTe2 ,Structural variants ,Vector surveillance ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Anopheles funestus is a leading vector of malaria in most parts of East and Southern Africa, yet its ecology and responses to vector control remain poorly understood compared with other vectors such as Anopheles gambiae and Anopheles arabiensis. This study presents the first large-scale survey of the genetic and phenotypic expression of insecticide resistance in An. funestus populations in Tanzania. Methods We performed insecticide susceptibility bioassays on An. funestus mosquitoes in nine regions with moderate-to-high malaria prevalence in Tanzania, followed by genotyping for resistance-associated mutations (CYP6P9a, CYP6P9b, L119F-GSTe2) and structural variants (SV4.3 kb, SV6.5 kb). Generalized linear models were used to assess relationships between genetic markers and phenotypic resistance. An interactive R Shiny tool was created to visualize the data and support evidence-based interventions. Results Pyrethroid resistance was universal but reversible by piperonyl-butoxide (PBO). However, carbamate resistance was observed in only five of the nine districts, and dichloro-diphenyl-trichloroethane (DDT) resistance was found only in the Kilombero valley, south-eastern Tanzania. Conversely, there was universal susceptibility to the organophosphate pirimiphos-methyl in all sites. Genetic markers of resistance had distinct geographical patterns, with CYP6P9a-R and CYP6P9b-R alleles, and the SV6.5 kb structural variant absent or undetectable in the north-west but prevalent in all other sites, while SV4.3 kb was prevalent in the north-western and western regions but absent elsewhere. Emergent L119F-GSTe2, associated with deltamethrin resistance, was detected in heterozygous form in districts bordering Mozambique, Malawi and the Democratic Republic of Congo. The resistance landscape was most complex in western Tanzania, in Tanganyika district, where all five genetic markers were detected. There was a notable south-to-north spread of resistance genes, especially CYP6P9a-R, though this appears to be interrupted, possibly by the Rift Valley. Conclusions This study underscores the need to expand resistance monitoring to include An. funestus alongside other vector species, and to screen for both the genetic and phenotypic signatures of resistance. The findings can be visualized online via an interactive user interface and could inform data-driven decision-making for resistance management and vector control. Since this was the first large-scale survey of resistance in Tanzania’s An. funestus, we recommend regular updates with greater geographical and temporal coverage. Graphical Abstract
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- 2024
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20. Synthesis, characterisation, and catalytic application of a soluble molecular carrier of sodium hydride activated by a substituted 4-(dimethylamino)pyridine
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Peter A. Macdonald, Alan R. Kennedy, Catherine E. Weetman, Stuart D. Robertson, and Robert E. Mulvey
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Chemistry ,QD1-999 - Abstract
Abstract Recently main group compounds have stepped into the territory of precious transition metal compounds with respect to utility in the homogeneous catalysis of fundamentally important organic transformations. Inspired by the need to promote more sustainability in chemistry because of their greater abundance in nature, this change of direction is surprising since main group metals generally do not possess the same breadth of reactivity as precious transition metals. Here, we introduce the dihydropyridylsodium compound, Na-1,2-tBu-DH(DMAP), and its monomeric variant [Na-1,2-tBu-DH(DMAP)]·Me6TREN, and demonstrate their effectiveness in transfer hydrogenation catalysis of the representative alkene 1,1-diphenylethylene to the alkane 1,1-diphenylethane using 1,4-cyclohexadiene as hydrogen source [DMAP = 4-dimethylaminopyridine; Me6TREN = tris(N,N-dimethyl-2-aminoethyl)amine]. Sodium is appealing because of its high abundance in the earth’s crust and oceans, but organosodium compounds have been rarely used in homogeneous catalysis. The success of the dihydropyridylsodium compounds can be attributed to their high solubility and reactivity in organic solvents.
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- 2024
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21. Signatures of adaptation at key insecticide resistance loci in Anopheles gambiae in Southern Ghana revealed by reduced-coverage WGS
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Tristan P. W. Dennis, John Essandoh, Barbara K. Mable, Mafalda S. Viana, Alexander E. Yawson, and David. Weetman
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Medicine ,Science - Abstract
Abstract Resistance to insecticides and adaptation to a diverse range of environments present challenges to Anopheles gambiae s.l. mosquito control efforts in sub-Saharan Africa. Whole-genome-sequencing is often employed for identifying the genomic basis underlying adaptation in Anopheles, but remains expensive for large-scale surveys. Reduced coverage whole-genome-sequencing can identify regions of the genome involved in adaptation at a lower cost, but is currently untested in Anopheles mosquitoes. Here, we use reduced coverage WGS to investigate population genetic structure and identify signatures of local adaptation in Anopheles mosquitoes across southern Ghana. In contrast to previous analyses, we find no structuring by ecoregion, with Anopheles coluzzii and Anopheles gambiae populations largely displaying the hallmarks of large, unstructured populations. However, we find signatures of selection at insecticide resistance loci that appear ubiquitous across ecoregions in An. coluzzii, and strongest in forest ecoregions in An. gambiae. Our study highlights resistance candidate genes in this region, and validates reduced coverage WGS, potentially to very low coverage levels, for population genomics and exploratory surveys for adaptation in Anopheles taxa.
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- 2024
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22. Power calculation for mosquito bioassays: Quantifying variability in the WHO tube bioassay and developing sample size guidance for the PBO synergism assay using a Shiny application [version 1; peer review: 1 approved, 2 approved with reservations]
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David Weetman, Jack Gillespie, Giorgio Praulins, Annabel Murphy-Fegan, Frank Mechan, Katherine Gleave, Rosemary Susan Lees, and Daniel P. McDermott
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Malaria ,vector control ,bioassay ,mosquito ,insecticide resistance ,resistance monitoring ,eng ,Medicine - Abstract
Background The WHO tube bioassay is a method for exposing mosquitos to determine susceptibility to insecticides, with mortality to discriminating doses 90% power). However, as the mortality of either group gets closer to 50%, a 10% difference between groups is more difficult to reliably detect. In the worst-case scenario where the mortality of either group is 50%, the mortality difference must be >22.5% to be detected with 80% power. We provide an R shiny application to assess power for other comparisons. Conclusions Our findings indicate that detecting synergism with the WHO tube assay is more difficult than assumed by the current WHO guidelines. Additionally, we demonstrate the value of using a Shiny application to make the outputs of simulation-based power analysis readily available to end-users, allowing them to determine the number of tubes needed to detect a given mortality difference.
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- 2024
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23. Spatiotemporal distribution and bionomics of Anopheles stephensi in different eco-epidemiological settings in Ethiopia
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Temesgen Ashine, Adane Eyasu, Yehenew Asmamaw, Eba Simma, Endalew Zemene, Adrienne Epstein, Rebecca Brown, Nigatu Negash, Abena Kochora, Alison M. Reynolds, Mikiyas Gebremichael Bulto, Temesgen Tafesse, Alemayehu Dagne, Biniyam Lukus, Endashaw Esayas, Sinknesh Wolde Behaksra, Kidist Woldekidan, Fikregabrail Aberra Kassa, Jimma Dinsa Deressa, Muluken Assefa, Dereje Dillu, Gudissa Assefa, Hiwot Solomon, Ahmed Zeynudin, Fekadu Massebo, Luigi Sedda, Martin James Donnelly, Anne L. Wilson, David Weetman, Endalamaw Gadisa, and Delenasaw Yewhalaw
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Anopheles stephensi ,Spatiotemporal distribution ,Blood meal source ,Sporozoite rate ,Household’s exposure ,Ethiopia ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Malaria is a major public health concern in Ethiopia, and its incidence could worsen with the spread of the invasive mosquito species Anopheles stephensi in the country. This study aimed to provide updates on the distribution of An. stephensi and likely household exposure in Ethiopia. Methods Entomological surveillance was performed in 26 urban settings in Ethiopia from 2021 to 2023. A kilometer-by-kilometer quadrant was established per town, and approximately 20 structures per quadrant were surveyed every 3 months. Additional extensive sampling was conducted in 50 randomly selected structures in four urban centers in 2022 and 2023 to assess households’ exposure to An. stephensi. Prokopack aspirators and CDC light traps were used to collect adult mosquitoes, and standard dippers were used to collect immature stages. The collected mosquitoes were identified to species level by morphological keys and molecular methods. PCR assays were used to assess Plasmodium infection and mosquito blood meal source. Results Catches of adult An. stephensi were generally low (mean: 0.15 per trap), with eight positive sites among the 26 surveyed. This mosquito species was reported for the first time in Assosa, western Ethiopia. Anopheles stephensi was the predominant species in four of the eight positive sites, accounting for 75–100% relative abundance of the adult Anopheles catches. Household-level exposure, defined as the percentage of households with a peridomestic presence of An. stephensi, ranged from 18% in Metehara to 30% in Danan. Anopheles arabiensis was the predominant species in 20 of the 26 sites, accounting for 42.9–100% of the Anopheles catches. Bovine blood index, ovine blood index and human blood index values were 69.2%, 32.3% and 24.6%, respectively, for An. stephensi, and 65.4%, 46.7% and 35.8%, respectively, for An. arabiensis. None of the 197 An. stephensi mosquitoes assayed tested positive for Plasmodium sporozoite, while of the 1434 An. arabiensis mosquitoes assayed, 62 were positive for Plasmodium (10 for P. falciparum and 52 for P. vivax). Conclusions This study shows that the geographical range of An. stephensi has expanded to western Ethiopia. Strongly zoophagic behavior coupled with low adult catches might explain the absence of Plasmodium infection. The level of household exposure to An. stephensi in this study varied across positive sites. Further research is needed to better understand the bionomics and contribution of An. stephensi to malaria transmission. Graphical Abstract
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- 2024
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24. Kdr genotyping and the first report of V410L and V1016I kdr mutations in voltage-gated sodium channel gene in Aedes aegypti (Diptera: Culicidae) from Iran
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Ahmadali Enayati, Reza Valadan, Mahboobeh Bagherzadeh, Mohammad Cheraghpour, Seyed Hassan Nikookar, Mahmoud Fazeli-Dinan, Nasibeh Hosseini-Vasoukolaei, Farzaneh Sahraei Rostami, Razieh Shabani Kordshouli, Ahmad Raeisi, Fatemeh Nikpour, Abdolreza Mirolyaei, Fatemeh Bagheri, Mohammad Mehdi Sedaghat, Morteza Zaim, David Weetman, and Janet Hemigway
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Aedes aegypti ,Iran ,Insecticide resistance ,Kdr ,Vgsc ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Aedes aegypti is the main vector of arboviral diseases worldwide. The species invaded and became established in southern Iran in 2020. Insecticide-based interventions are primarily used for its control. With insecticide resistance widespread, knowledge of resistance mechanisms is vital for informed deployment of insecticidal interventions, but information from Iranian Ae. aegypti is lacking. Methods Fifty-six Ae. aegypti specimens were collected from the port city of Bandar Lengeh in Hormozgan Province in the South of Iran in 2020 and screened for kdr mutations. The most common kdr mutations in Latin America and Asia (V410L, S989P, V1016G/I and F1534C), especially when present in combinations, are highly predictive of DDT and pyrethroid resistance were detected. Phylogenetic analyses based on the diversity of S989P and V1016G/I mutations were undertaken to assess the phylogeography of these kdr mutations. Results Genotyping all four kdr positions of V410L, S989P, V1016G/I and F1534C revealed that only 16 out of the 56 (28.57%) specimens were homozygous wild type for all kdr mutation sites. Six haplotypes including VSVF (0.537), VSVC (0.107), LSVF (0.016), LSIF (0.071), VPGC (0.257) and LPGC (0.011) were detected in this study. For the first time, 11 specimens harbouring the V410L mutation, and 8 samples with V1016I mutation were found. V410L and V1016I were coincided in 8 specimens. Also, six specimens contained 1016G/I double mutation which was not reported before. Conclusions The relatively high frequency of these kdr mutations in Iranian Ae. aegypti indicates a population exhibiting substantial resistance to pyrethroid insecticides, which are used widely in control operations and household formulations. The detection of the 410L/1016I kdr mutant haplotype in Iranian Ae. aegypti suggests possible convergence of invasive populations from West Africa or Latin America. However, as Iran has very limited maritime/air connections with those African countries, a Latin American origin for the invasive Ae. aegypti in Iran is more plausible. Graphical abstract
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- 2024
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25. Exploring the research needs, barriers and facilitators to the collection of biological data in adolescence for mental health research: a scoping review protocol paper
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Rachel Upthegrove, Rebecca Pollard, Rosemary R C McEachan, Talya Porat, Paola Dazzan, Seeromanie Harding, Craig Morgan, David Ryan, Valeria Mondelli, Carmine M Pariante, Chiara Nosarti, Gillian Brooks, Anna Lavis, Matthew Broome, Katy Shire, Anthony Woods, Courtney Worrell, Tyler Weetman, Zara Sadiq, Maria Pieptan, Niyah Campbell, Nzinga Gardner, and Lea Schmid
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Medicine - Abstract
Introduction While research into adolescent mental health has developed a considerable understanding of environmental and psychosocial risk factors, equivalent biological evidence is lacking and is not representative of economic, social and ethnic diversity in the adolescent population. It is important to understand the possible barriers and facilitators to conduct this research. This will then allow us to improve our understanding of how biology interacts with environmental and psychosocial risk factors during adolescence. The objective of this scoping review is to identify and understand the needs, barriers and facilitators related to the collection of biological data in adolescent mental health research.Methods and analysis Reviewers will conduct a systematic search of PubMed, Medline, Scopus, Cochrane, ERIC, EMBASE, ProQuest, EBSCO Global Health electronic databases, relevant publications and reference lists to identify studies published in the English language at any time. This scoping review will identify published studies exploring mental health/psychopathology outcomes, with biological measures, in participants between the ages of 11 and 18 and examine the reported methodology used for data collection. Data will be summarised in tabular form with narrative synthesis and will use the methodology of Levac et al, supplemented by subsequent recommendations from the Joanna Briggs Institute Scoping Review Methodology.Ethics and dissemination Ethical approval is not required for this scoping review. The scoping review will be conducted with input from patient and public involvement, specifically including young people involved in our study (‘Co-producing a framework of guiding principles for Engaging representative and diverse cohorts of young peopLE in Biological ReseArch in menTal hEalth’—www.celebrateproject.co.uk) Youth Expert Working Group. Dissemination will include publication in peer-reviewed journals, academic presentations and on the project website.
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- 2024
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26. Antidepressants for the prevention of depression following first-episode psychosis (ADEPP): study protocol for a multi-centre, double-blind, randomised controlled trial
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Edward R. Palmer, Siân Lowri Griffiths, Ben Watkins, Tyler Weetman, Ryan Ottridge, Smitaa Patel, Rebecca Woolley, Sarah Tearne, Pui Au, Eleanor Taylor, Zara Sadiq, Hareth Al-Janabi, Barnaby Major, Charlotte Marriott, Nusrat Husain, Mohammad Zia Ul Haq Katshu, Domenico Giacco, Nicholas M. Barnes, James T. R. Walters, Thomas R. E. Barnes, Max Birchwood, Richard Drake, and Rachel Upthegrove
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Prevention ,Depression ,Antidepressant ,Functioning ,First-episode psychosis ,Medicine (General) ,R5-920 - Abstract
Abstract Background Depressive episodes are common after first-episode psychosis (FEP), affecting more than 40% of people, adding to individual burden, poor outcomes, and healthcare costs. If the risks of developing depression were lower, this could have a beneficial effect on morbidity and mortality, as well as improving outcomes. Sertraline is a selective serotonin reuptake inhibitor and a common first-line medication for the treatment of depression in adults. It has been shown to be safe when co-prescribed with antipsychotic medication, and there is evidence that it is an effective treatment for depression in established schizophrenia. We present a protocol for a multi-centre, double-blind, randomised, placebo-controlled clinical trial called ADEPP that aims to investigate the efficacy and cost-effectiveness of sertraline in preventing depression after FEP. Methods The recruitment target is 452 participants between the ages of 18 and 65 years who are within 12 months of treatment initiation for FEP. Having provided informed consent, participants will be randomised to receive either 50 mg of sertraline daily or matched placebo for 6 months, in addition to treatment as usual. The primary outcome measure will be a comparison of the number of new cases of depression between the treatment and placebo arms over the 6-month intervention phase. Secondary outcomes include suicidal behaviour, anxiety, rates of relapse, functional outcome, quality of life, and resource use. Discussion The ADEPP trial will test whether the addition of sertraline following FEP is a clinically useful, acceptable, and cost-effective way of improving outcomes following FEP. Trial registration ISRCTN12682719 registration date 24/11/2020.
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- 2023
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27. Genome-wide association studies reveal novel loci associated with pyrethroid and organophosphate resistance in Anopheles gambiae and Anopheles coluzzii
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Eric R. Lucas, Sanjay C. Nagi, Alexander Egyir-Yawson, John Essandoh, Samuel Dadzie, Joseph Chabi, Luc S. Djogbénou, Adandé A. Medjigbodo, Constant V. Edi, Guillaume K. Kétoh, Benjamin G. Koudou, Arjen E. Van’t Hof, Emily J. Rippon, Dimitra Pipini, Nicholas J. Harding, Naomi A. Dyer, Louise T. Cerdeira, Chris S. Clarkson, Dominic P. Kwiatkowski, Alistair Miles, Martin J. Donnelly, and David Weetman
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Science - Abstract
Abstract Resistance to insecticides in Anopheles mosquitoes threatens the effectiveness of malaria control, but the genetics of resistance are only partially understood. We performed a large scale multi-country genome-wide association study of resistance to two widely used insecticides: deltamethrin and pirimiphos-methyl, using sequencing data from An. gambiae and An. coluzzii from ten locations in West Africa. Resistance was highly multi-genic, multi-allelic and variable between populations. While the strongest and most consistent association with deltamethrin resistance came from Cyp6aa1, this was based on several independent copy number variants (CNVs) in An. coluzzii, and on a non-CNV haplotype in An. gambiae. For pirimiphos-methyl, signals included Ace1, cytochrome P450s, glutathione S-transferases and the nAChR target site of neonicotinoid insecticides. The regions around Cyp9k1 and the Tep family of immune genes showed evidence of cross-resistance to both insecticides. These locally-varying, multi-allelic patterns highlight the challenges involved in genomic monitoring of resistance, and may form the basis for improved surveillance methods.
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- 2023
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28. Advances in the genetic characterization of the malaria vector, Anopheles funestus, and implications for improved surveillance and control
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Joel O. Odero, Ismail H. Nambunga, Dimitri W. Wangrawa, Athanase Badolo, David Weetman, Lizette L. Koekemoer, Heather M. Ferguson, Fredros O. Okumu, and Francesco Baldini
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Anopheles funestus group ,Species identification ,Insecticide resistance ,Population genetics ,Gene flow ,Genetic control ,Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Anopheles mosquitoes present a major public health challenge in sub-Saharan Africa; notably, as vectors of malaria that kill over half a million people annually. In parts of the east and southern Africa region, one species in the Funestus group, Anopheles funestus, has established itself as an exceptionally dominant vector in some areas, it is responsible for more than 90% of all malaria transmission events. However, compared to other malaria vectors, the species is far less studied, partly due to difficulties in laboratory colonization and the unresolved aspects of its taxonomy and systematics. Control of An. funestus is also increasingly difficult because it has developed widespread resistance to public health insecticides. Fortunately, recent advances in molecular techniques are enabling greater insights into species identity, gene flow patterns, population structure, and the spread of resistance in mosquitoes. These advances and their potential applications are reviewed with a focus on four research themes relevant to the biology and control of An. funestus in Africa, namely: (i) the taxonomic characterization of different vector species within the Funestus group and their role in malaria transmission; (ii) insecticide resistance profile; (iii) population genetic diversity and gene flow, and (iv) applications of genetic technologies for surveillance and control. The research gaps and opportunities identified in this review will provide a basis for improving the surveillance and control of An. funestus and malaria transmission in Africa.
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- 2023
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29. Implementing and Evaluating a National Integrated Digital Registry and Clinical Decision Support System in Early Intervention in Psychosis Services (Early Psychosis Informatics Into Care): Co-Designed Protocol
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Siân Lowri Griffiths, Graham K Murray, Yanakan Logeswaran, John Ainsworth, Sophie M Allan, Niyah Campbell, Richard J Drake, Mohammad Zia Ul Haq Katshu, Matthew Machin, Megan A Pope, Sarah A Sullivan, Justin Waring, Tumelo Bogatsu, Julie Kane, Tyler Weetman, Sonia Johnson, James B Kirkbride, and Rachel Upthegrove
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Medicine ,Computer applications to medicine. Medical informatics ,R858-859.7 - Abstract
BackgroundEarly intervention in psychosis (EIP) services are nationally mandated in England to provide multidisciplinary care to people experiencing first-episode psychosis, which disproportionately affects deprived and ethnic minority youth. Quality of service provision varies by region, and people from historically underserved populations have unequal access. In other disease areas, including stroke and dementia, national digital registries coupled with clinical decision support systems (CDSSs) have revolutionized the delivery of equitable, evidence-based interventions to transform patient outcomes and reduce population-level disparities in care. Given psychosis is ranked the third most burdensome mental health condition by the World Health Organization, it is essential that we achieve the same parity of health improvements. ObjectiveThis paper reports the protocol for the program development phase of this study, in which we aimed to co-design and produce an evidence-based, stakeholder-informed framework for the building, implementation, piloting, and evaluation of a national integrated digital registry and CDSS for psychosis, known as EPICare (Early Psychosis Informatics into Care). MethodsWe conducted 3 concurrent work packages, with reciprocal knowledge exchange between each. In work package 1, using a participatory co-design framework, key stakeholders (clinicians, academics, policy makers, and patient and public contributors) engaged in 4 workshops to review, refine, and identify a core set of essential and desirable measures and features of the EPICare registry and CDSS. Using a modified Delphi approach, we then developed a consensus of data priorities. In work package 2, we collaborated with National Health Service (NHS) informatics teams to identify relevant data currently captured in electronic health records, understand data retrieval methods, and design the software architecture and data model to inform future implementation. In work package 3, observations of stakeholder workshops and individual interviews with representative stakeholders (n=10) were subject to interpretative qualitative analysis, guided by normalization process theory, to identify factors likely to influence the adoption and implementation of EPICare into routine practice. ResultsStage 1 of the EPICare study took place between December 2021 and September 2022. The next steps include stage 2 building, piloting, implementation, and evaluation of EPICare in 5 demonstrator NHS Trusts serving underserved and diverse populations with substantial need for EIP care in England. If successful, this will be followed by stage 3, in which we will seek NHS adoption of EPICare for rollout to all EIP services in England. ConclusionsBy establishing a multistakeholder network and engaging them in an iterative co-design process, we have identified essential and desirable elements of the EPICare registry and CDSS; proactively identified and minimized potential challenges and barriers to uptake and implementation; and addressed key questions related to informatics architecture, infrastructure, governance, and integration in diverse NHS Trusts, enabling us to proceed with the building, piloting, implementation, and evaluation of EPICare. International Registered Report Identifier (IRRID)DERR1-10.2196/50177
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- 2024
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30. Behavioural responses of Anopheles gambiae to standard pyrethroid and PBO-treated bednets of different operational ages
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Emma Reid, Frank Mechan, Jeff Jones, Amy Lynd, Janet Hemingway, Philip McCall, and David Weetman
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Anopheles gambiae ,Insecticide ,Behaviour ,Piperonyl butoxide (PBO) ,Insecticide-treated nets (ITN) ,Infectious and parasitic diseases ,RC109-216 - Abstract
To combat pyrethroid insecticide resistance, there has been widespread distribution of pyrethroid-treated bednets (ITNs) co-impregnated with piperonyl butoxide (PBO), a synergist that inhibits enzyme activity to block metabolic resistance. While PBO impacts physiological resistance, mosquito behavioural responses when attempting to blood-feed through nets may be more dependent on net characteristics, in particular the insecticide treatment and operational age of nets. These potentially interacting effects are currently not well characterised. This study aimed to investigate the behavioural responses of Anopheles gambiae to different types of ITNs of different ages to evaluate the relationships between behaviours, insecticide type, age of net and mortality. A pyrethroid-resistant An. gambiae strain originally from Busia, Uganda, was tested with modified WHO cone assays in which a human arm is provided as bait and the trial is video recorded. Using the recordings, movement patterns throughout the cone were monitored to assess net contact and avoidance behaviours. Nets tested were PermaNet 2.0, PermaNet 3.0, Olyset and Olyset Plus, aged 0 months (unused), 12 months, and 25 months post-deployment, all collected from a field trial in Uganda. Our primary hypothesis was that behavioural indices of irritancy would decline with net age as active ingredient concentrations decline, in line with mortality. Knockdown and mortality were highest on baseline nets with PBO and declined thereafter, whereas each was much lower and invariant with age for non-PBO nets. Mosquito movement in the cones was also higher at baseline and declined with age for PBO nets, but not non-PBO nets, indicating an association between mortality and irritancy-induced movement. Baseline nets with PBO also elicited less net contact than older nets, whilst non-PBO nets showed no relationship between net contact and age. PBO nets also elicited irritancy behaviour even after a short period of exposure. In conclusion, the addition of PBO was initially effective in restoring the efficacy of nets, but this relative advantage declined with time, as did the behavioural indices, movement and net contact, suggesting declining irritancy as PBO is lost.
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- 2024
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31. Investigating the association between household exposure to Anopheles stephensi and malaria in Sudan and Ethiopia: A case-control study protocol.
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Temesgen Ashine, Yehenew Asmamaw Ebstie, Rayyan Ibrahim, Adrienne Epstein, John Bradley, Mujahid Nouredayem, Mikiyas G Michael, Amani Sidiahmed, Nigatu Negash, Abena Kochora, Jihad Eltaher Sulieman, Alison M Reynolds, Eba Alemayehu, Endalew Zemene, Adane Eyasu, Alemayehu Dagne, Elifaged Hailemeskel, Fatou Jaiteh, Dereje Geleta, Ephrem Lejore, David Weetman, Ahmed Mahmoud Hussien, Fadwa Saad, Gudissa Assefa, Hiwot Solomon, Abdelgadir Bashir, Fekadu Massebo, Koen Peeters, Delenasaw Yewhalaw, Hmooda Toto Kafy, Martin J Donnelly, Endalamaw Gadisa, Elfatih M Malik, and Anne L Wilson
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Medicine ,Science - Abstract
BackgroundEndemic African malaria vectors are poorly adapted to typical urban ecologies. However, Anopheles stephensi, an urban malaria vector formerly confined to South Asia and the Persian Gulf, was recently detected in Africa and may change the epidemiology of malaria across the continent. Little is known about the public health implications of An. stephensi in Africa. This study is designed to assess the relative importance of household exposure to An. stephensi and endemic malaria vectors for malaria risk in urban Sudan and Ethiopia.MethodsCase-control studies will be conducted in 3 urban settings (2 in Sudan, 1 in Ethiopia) to assess the association between presence of An. stephensi in and around households and malaria. Cases, defined as individuals positive for Plasmodium falciparum and/or P. vivax by microscopy/rapid diagnostic test (RDT), and controls, defined as age-matched individuals negative for P. falciparum and/or P. vivax by microscopy/RDT, will be recruited from public health facilities. Both household surveys and entomological surveillance for adult and immature mosquitoes will be conducted at participant homes within 48 hours of enrolment. Adult and immature mosquitoes will be identified by polymerase chain reaction (PCR). Conditional logistic regression will be used to estimate the association between presence of An. stephensi and malaria status, adjusted for co-occurrence of other malaria vectors and participant gender.ConclusionsFindings from this study will provide evidence of the relative importance of An. stephensi for malaria burden in urban African settings, shedding light on the need for future intervention planning and policy development.
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- 2024
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32. First report of V1016I, F1534C and V410L kdr mutations associated with pyrethroid resistance in Aedes aegypti populations from Niamey, Niger
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Abdoul-Aziz Maiga, Aboubacar Sombié, Nicolas Zanré, Félix Yaméogo, Souleymane Iro, Jean Testa, Antoine Sanon, Ousmane Koita, Hirotaka Kanuka, Philip J. McCall, David Weetman, and Athanase Badolo
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Medicine ,Science - Published
- 2024
33. Advances in the genetic characterization of the malaria vector, Anopheles funestus, and implications for improved surveillance and control
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Odero, Joel O., Nambunga, Ismail H., Wangrawa, Dimitri W., Badolo, Athanase, Weetman, David, Koekemoer, Lizette L., Ferguson, Heather M., Okumu, Fredros O., and Baldini, Francesco
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- 2023
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34. Antidepressants for the prevention of depression following first-episode psychosis (ADEPP): study protocol for a multi-centre, double-blind, randomised controlled trial
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Palmer, Edward R., Griffiths, Siân Lowri, Watkins, Ben, Weetman, Tyler, Ottridge, Ryan, Patel, Smitaa, Woolley, Rebecca, Tearne, Sarah, Au, Pui, Taylor, Eleanor, Sadiq, Zara, Al-Janabi, Hareth, Major, Barnaby, Marriott, Charlotte, Husain, Nusrat, Katshu, Mohammad Zia Ul Haq, Giacco, Domenico, Barnes, Nicholas M., Walters, James T. R., Barnes, Thomas R. E., Birchwood, Max, Drake, Richard, and Upthegrove, Rachel
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- 2023
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35. Genome-wide association studies reveal novel loci associated with pyrethroid and organophosphate resistance in Anopheles gambiae and Anopheles coluzzii
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Lucas, Eric R., Nagi, Sanjay C., Egyir-Yawson, Alexander, Essandoh, John, Dadzie, Samuel, Chabi, Joseph, Djogbénou, Luc S., Medjigbodo, Adandé A., Edi, Constant V., Kétoh, Guillaume K., Koudou, Benjamin G., Van’t Hof, Arjen E., Rippon, Emily J., Pipini, Dimitra, Harding, Nicholas J., Dyer, Naomi A., Cerdeira, Louise T., Clarkson, Chris S., Kwiatkowski, Dominic P., Miles, Alistair, Donnelly, Martin J., and Weetman, David
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- 2023
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36. Improving the efficiency of aerosolized insecticide testing against mosquitoes
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Silva Martins, Walter Fabricio, Reid, Emma, Tomlinson, Sean, Evans, George, Gibson, Jennie, Guy, Amy, Donnelly, Martin, and Weetman, David
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- 2023
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37. Association of 410L, 1016I and 1534C kdr mutations with pyrethroid resistance in Aedes aegypti from Ouagadougou, Burkina Faso, and development of a one-step multiplex PCR method for the simultaneous detection of 1534C and 1016I kdr mutations
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Sombié, Aboubacar, Ouédraogo, Wendegoudi Mathias, Oté, Manabu, Saiki, Erisha, Sakurai, Tatsuya, Yaméogo, Félix, Sanon, Antoine, McCall, Philip J., Kanuka, Hirotaka, Weetman, David, and Badolo, Athanase
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- 2023
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38. Insecticide resistance status of Aedes aegypti in southern and northern Ghana
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Abdulai, Anisa, Owusu-Asenso, Christopher Mfum, Akosah-Brempong, Gabriel, Mohammed, Abdul Rahim, Sraku, Isaac Kwame, Attah, Simon Kwaku, Forson, Akua Obeng, Weetman, David, and Afrane, Yaw Asare
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- 2023
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39. Confirmation of the presence of Anopheles stephensi among internally displaced people’s camps and host communities in Aden city, Yemen
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Allan, Richard, Weetman, David, Sauskojus, Hendrik, Budge, Sophie, Hawail, Tarek Bin, and Baheshm, Yasser
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- 2023
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40. Insecticide resistance management strategies for public health control of mosquitoes exhibiting polygenic resistance: A comparison of sequences, rotations, and mixtures
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Neil Philip Hobbs, David Weetman, and Ian Michael Hastings
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insecticides ,mixtures ,mosquitoes ,polygenic ,rotations ,sequences ,Evolution ,QH359-425 - Abstract
Abstract Malaria control uses insecticides to kill Anopheles mosquitoes. Recent successes in malaria control are threatened by increasing levels of insecticide resistance (IR), requiring insecticide resistance management (IRM) strategies to mitigate this problem. Field trials of IRM strategies are usually prohibitively expensive with long timeframes, and mathematical modeling is often used to evaluate alternative options. Previous IRM models in the context of malaria control assumed IR to have a simple (monogenic) basis, whereas in natural populations, IR will often be a complex polygenic trait determined by multiple genetic variants. A quantitative genetics model was developed to model IR as a polygenic trait. The model allows insecticides to be deployed as sequences (continuous deployment until a defined withdrawal threshold, termed “insecticide lifespan”, as indicated by resistance diagnosis in bioassays), rotations (periodic switching of insecticides), or full‐dose mixtures (two insecticides in one formulation). These IRM strategies were compared based on their “strategy lifespan” (capped at 500 generations). Partial rank correlation and generalized linear modeling was used to identify and quantify parameters driving the evolution of resistance. Random forest models were used to identify parameters offering predictive value for decision‐making. Deploying single insecticides as sequences or rotations usually made little overall difference to their “strategy lifespan”, though rotations displayed lower mean and peak resistances. Deploying two insecticides in a full‐dose mixture formulation was found to extend the “strategy lifespan” when compared to deploying each in sequence or rotation. This pattern was observed regardless of the level of cross resistance between the insecticides or the starting level of resistance. Statistical analysis highlighted the importance of insecticide coverage, cross resistance, heritability, and fitness costs for selecting an appropriate IRM strategy. Full‐dose mixtures appear the most promising of the strategies evaluated, with the longest “strategy lifespans”. These conclusions broadly corroborate previous results from monogenic models.
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- 2023
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41. Association of 410L, 1016I and 1534C kdr mutations with pyrethroid resistance in Aedes aegypti from Ouagadougou, Burkina Faso, and development of a one-step multiplex PCR method for the simultaneous detection of 1534C and 1016I kdr mutations
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Aboubacar Sombié, Wendegoudi Mathias Ouédraogo, Manabu Oté, Erisha Saiki, Tatsuya Sakurai, Félix Yaméogo, Antoine Sanon, Philip J. McCall, Hirotaka Kanuka, David Weetman, and Athanase Badolo
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Aedes aegypti ,Pyrethroids ,Resistance ,Malathion ,Multiplex PCR ,Kdr ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Since 2000, Burkina Faso has experienced regular dengue cases and outbreaks, making dengue an increasingly important health concern for the country. Previous studies in Burkina Faso reported that resistance of Aedes aegypti to pyrethroid insecticides was associated with the F1534C and V1016I kdr mutations. The current study reports high resistance of Ae. aegypti populations to pyrethroid insecticides, likely supported by mutations in the voltage-gated sodium channel, here evidenced by genotyping the kdr SNPs V410L, V1016I and F1534C. We also describe a new multiplex PCR-based diagnostic of F1534C and V1016I kdr SNPs. Methods Larvae of Ae. aegypti were collected from three health districts of Ouagadougou in 2018. The resistance status of Ae. aegypti to permethrin (15 μg/ml) and deltamethrin (10 μg/ml) was tested using bottles and to malathion (5%) using WHO tube tests. All bioassays used 1-h exposure and mortality recorded 24 h post-exposure. Bioassay results were interpreted according to WHO thresholds for resistance diagnosis. The kdr mutations were screened using AS-PCR and TaqMan methods in exposed and non-exposed Aedes mosquitoes. Results Females from all health districts were resistant to permethrin and deltamethrin (
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- 2023
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42. Insecticide resistance status of Aedes aegypti in southern and northern Ghana
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Anisa Abdulai, Christopher Mfum Owusu-Asenso, Gabriel Akosah-Brempong, Abdul Rahim Mohammed, Isaac Kwame Sraku, Simon Kwaku Attah, Akua Obeng Forson, David Weetman, and Yaw Asare Afrane
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Insecticide resistance ,Target-site mutations ,Aedes aegypti ,Piperonyl butoxide synergist ,Knockdown resistance ,Ghana ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Outbreaks of Aedes-borne arboviral diseases are becoming rampant in Africa. In Ghana, there is no organized arboviral control programme with interventions restricted to mitigate outbreaks. Insecticide application is a crucial part of outbreak responses and future preventative control measures. Thus, knowledge of the resistance status and underlying mechanisms of Aedes populations is required to ensure optimal insecticide choices. The present study assessed the insecticide resistance status of Aedes aegypti populations from southern Ghana (Accra, Tema and Ada Foah) and northern Ghana (Navrongo) respectively. Methods Phenotypic resistance was determined with WHO susceptibility tests using Ae. aegypti collected as larvae and reared into adults. Knockdown resistance (kdr) mutations were detected using allele-specific PCR. Synergist assays were performed with piperonyl butoxide (PBO) to investigate the possible involvement of metabolic mechanisms in resistance phenotypes. Results Resistance to DDT was moderate to high across sites (11.3 to 75.8%) and, for the pyrethroids deltamethrin and permethrin, moderate resistance was detected (62.5 to 88.8%). The 1534C kdr and 1016I kdr alleles were common in all sites (0.65 to 1) and may be on a trajectory toward fixation. In addition, a third kdr mutant, V410L, was detected at lower frequencies (0.03 to 0.31). Pre-exposure to PBO significantly increased the susceptibility of Ae. aegypti to deltamethrin and permethrin (P
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- 2023
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43. Improving the efficiency of aerosolized insecticide testing against mosquitoes
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Walter Fabricio Silva Martins, Emma Reid, Sean Tomlinson, George Evans, Jennie Gibson, Amy Guy, Martin Donnelly, and David Weetman
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Medicine ,Science - Abstract
Abstract Developing robust and standardised approaches for testing mosquito populations against insecticides is vital for understanding the effectiveness of new active ingredients or formulations. Methods for testing mosquito susceptibility against contact insecticides or products, such as those delivered through public health programmes, are well-established and standardised. Nevertheless, approaches for testing volatile or aerosolized insecticides used in household products can be challenging to implement efficiently. We adapted WHO guidelines for household insecticides to develop a standardised and higher-throughput methodology for testing aerosolized products in a Peet Grady test chamber (PG-chamber) using caged mosquitoes and an efficient decontamination method. The new approach was validated using insecticide resistant and susceptible Aedes and Anopheles mosquito colonies. An added feature is the inclusion of cage-facing cameras to allow real-time quantification of knockdown following insecticide exposure. The wipe-based decontamination method was highly effective for removing pyrethroids' aerosolized oil-based residues from chamber surfaces, with
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- 2023
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44. Perceptions of Sheep Farmers and District Veterinarians towards Sheep Disease Management in New South Wales, Australia
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Jessica Boyd-Weetman, Lauren Alam, Om Dhungyel, and Wendy I. Muir
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sheep farmers ,district veterinarians ,sheep disease management ,biosecurity ,sheep health ,Australian sheep producers ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
The study objectives were to understand the practices and perceptions of sheep farmers and district veterinarians (DVs) towards sheep health management and, the impact of disease at the farm level in addition to the availability, accessibility, and use of veterinary services. Data were collected using question-based surveys, distributed online and in-person to sheep farmers (45 respondents) and DVs (25 respondents). Most farmers were male, ≥51 years old, who placed a high priority on the health and welfare of their sheep. For disease prevention most farmers vaccinated their sheep (91%) and 86.7% had a farm biosecurity plan, although its components and their application varied, e.g., the isolation of new or sick sheep. Fencing costs were most frequently identified (70.5% respondents) as a financial concern for sheep farmers. Their most common sources of information about disease control and prevention were DVs (66.7%), private veterinarians (60.0%), the internet (42.9%), rural suppliers (35.7%), and farmers/neighbours (28.6%). Fifty-eight percent of farmers reported a long distance from veterinarian services. Farmers preferred to receive information via email (77.8%), whereas 56% of DVs preferred to share information via phone call. This discrepancy presents an opportunity to align these mechanisms more closely for effective dissemination of information and increased producer engagement.
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- 2024
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45. Molecular surveillance of insecticide resistance in Phlebotomus argentipes targeted by indoor residual spraying for visceral leishmaniasis elimination in India.
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Emma Reid, Rinki Michelle Deb, Asgar Ali, Rudra Pratap Singh, Prabhas Kumar Mishra, Josephine Shepherd, Anand Mohan Singh, Aakanksha Bharti, Chandramani Singh, Sadhana Sharma, Michael Coleman, and David Weetman
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Arctic medicine. Tropical medicine ,RC955-962 ,Public aspects of medicine ,RA1-1270 - Abstract
Molecular surveillance of resistance is an increasingly important part of vector borne disease control programmes that utilise insecticides. The visceral leishmaniasis (VL) elimination programme in India uses indoor residual spraying (IRS) with the pyrethroid, alpha-cypermethrin to control Phlebotomus argentipes the vector of Leishmania donovani, the causative agent of VL. Prior long-term use of DDT may have selected for knockdown resistance (kdr) mutants (1014F and S) at the shared DDT and pyrethroid target site, which are common in India and can also cause pyrethroid cross-resistance. We monitored the frequency of these marker mutations over five years from 2017-2021 in sentinel sites in eight districts of north-eastern India covered by IRS. Frequencies varied markedly among the districts, though finer scale variation, among villages within districts, was limited. A pronounced and highly significant increase in resistance-associated genotypes occurred between 2017 and 2018, but with relative stability thereafter, and some reversion toward more susceptible genotypes in 2021. Analyses linked IRS with mutant frequencies suggesting an advantage to more resistant genotypes, especially when pyrethroid was under-sprayed in IRS. However, this advantage did not translate into sustained allele frequency changes over the study period, potentially because of a relatively greater net advantage under field conditions for a wild-type/mutant genotype than projected from laboratory studies and/or high costs of the most resistant genotype. Further work is required to improve calibration of each 1014 genotype with resistance, preferably using operationally relevant measures. The lack of change in resistance mechanism over the span of the study period, coupled with available bioassay data suggesting susceptibility, suggests that resistance has yet to emerge despite intensive IRS. Nevertheless, the advantage of resistance-associated genotypes with IRS and under spraying, suggest that measures to continue monitoring and improvement of spray quality are vital, and consideration of future alternatives to pyrethroids for IRS would be advisable.
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- 2023
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46. Confirmation of the presence of Anopheles stephensi among internally displaced people’s camps and host communities in Aden city, Yemen
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Richard Allan, David Weetman, Hendrik Sauskojus, Sophie Budge, Tarek Bin Hawail, and Yasser Baheshm
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Anopheles stephensi ,Conflict ,Internally displaced people ,Malaria ,Temporary shelter ,Urban vector ,Arctic medicine. Tropical medicine ,RC955-962 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Declines in global malaria cases and deaths since the millennium are currently challenged by multiple factors including funding limitations, limits of, and resistance to vector control tools, and also recent spread of the invasive vector species, Anopheles stephensi—especially into novel urban settings where malaria rates are typically low. Coupled with general increases in urbanization and escalations in the number of conflicts creating rapid and unplanned population displacement into temporary shelter camps within host urban areas, particularly in the Middle East and sub-Saharan Africa, increased urban malaria is a major threat to control and elimination. Methods Entomological monitoring surveys (targeting Aedes aegypti) of water containers across urban areas hosting internally displaced people (IDP) communities in Aden city, Yemen, were performed by The MENTOR Initiative, a non-governmental organisation. As part of these surveys in 2021 23 larvae collected and raised to adults were morphologically identified as An. stephensi. Twelve of the samples were sent to Liverpool School of Tropical Medicine for independent morphological assessment and genetic analysis by sequencing the ribosomal ITS2 region and the mitochondrial COI gene. Results All twelve samples were confirmed morphologically and by sequence comparison of the single ITS2 and COI haplotype detected to the NCBI BLAST database as An. stephensi. Phylogenetic analysis with comparable COI sequences indicated close relationship to haplotypes found in Djibouti and Ethiopia. Conclusion The study results confirm the presence of An. stephensi in Yemen. Confirmation of the species in multiple urban communities hosting thousands of IDPs living in temporary shelters with widescale dependency on open water containers is of particular concern due to the vulnerability of the population and abundance of favourable breeding sites for the vector. Proactive monitoring and targeted integrated vector management are required to limit impacts in this area of typically low malaria transmission, and to prevent further the spread of An. stephensi within the region.
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- 2023
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47. Impact of physicochemical parameters of Aedes aegypti breeding habitats on mosquito productivity and the size of emerged adult mosquitoes in Ouagadougou City, Burkina Faso
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Wendegoudi Mathias Ouédraogo, Kobié Hyacinthe Toé, Aboubacar Sombié, Mafalda Viana, Clarisse Bougouma, Antoine Sanon, David Weetman, Philip J. McCall, Hirotaka Kanuka, and Athanase Badolo
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Ae. aegypti ,Breeding sites ,Larvae ,Pupae ,Stegomyia index ,Body size ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Outbreaks of dengue fever caused by viruses transmitted by Aedes aegypti mosquitoes are repeated occurrences in West Africa. In recent years, Burkina Faso has experienced major dengue outbreaks, most notably in 2016 and 2017 when 80% of cases were recorded in Ouagadougou City (Central Health Region). In order to better understand the ecology of this vector and to provide information for use in developing control measures, a study on the characteristics of Aedes container breeding sites and the productivity of such sites, as measured by the abundance of immature stages and resultant adult body size, was undertaken in three health districts (Baskuy, Bogodogo and Nongremassom) of Ouagadougou. Methods Adult mosquitoes were collected indoors and outdoors in 643 households during the rainy season from August to October 2018. The presence of water containers was systematically recorded and the containers examined for the presence or absence of larvae. Characteristics of the container breeding sites, including size of the container and temperature, pH and conductivity of the water contained within, were recorded as well as the volume of water. Traditional Stegomyia indices were calculated as quantitative indicators of the risk of dengue outbreaks; generalised mixed models were fitted to larval and pupal densities, and the contribution of each covariate to the model was evaluated by the Z-value and associated P-value. Results A total of 1061 container breeding sites were inspected, of which 760 contained immature stages of Ae. aegypti (‘positive’ containers). The most frequent container breeding sites found in each health district were tyres and both medium (buckets/cans/pots) and large (bins/barrels/drums) containers; these containers were also the most productive larval habitats and the types that most frequently tested positive. Of the Stegomyia indices, the Breteau, House and Container indices exceeded WHO dengue risk thresholds. Generalised linear mixed models showed that larval and pupal abundances were associated with container type, physicochemical characteristics of the water and collection month, but there were significant differences among container types and among health districts. Aedes aegypti body size was positively associated with type and diameter of the container, as well as with electrical conductivity of the water, and negatively associated with pH and temperature of the water and with the level of exposure of the container to sunlight. Conclusion This study provides data on putative determinants of the productivity of habitats regarding Ae. aegypti immature stages. These data are useful to better understand Ae. aegypti proliferation. The results suggest that identifying and targeting the most productive container breeding sites could contribute to dengue vector control strategies in Burkina Faso. Graphical Abstract
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- 2022
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48. Privatizing the Chinese Tiehua Industry: A Qualitative Economic Case Study
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Andrew Roberts, Carly Weetman, Kevin McIntyre, and Qin Fang
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Privatization ,competition ,market structure ,China ,tiehua ,Fine Arts ,Language and Literature - Abstract
Tiehua (wrought iron painting) is a folk art originating in Anhui Province, China. The tiehua industry has changed drastically over the last 25 years as China's economy has liberalized: Wuhu Tiehua Factory, a heretofore state monopoly, underwent bankruptcy restructuring in 1992, 2002, and 2013, while several new, smaller and more competitive firms have entered the market. The marketization of tiehua has become a meaningful local and regional issue centering on the ownership structure of the tiehua firms, and has proven to be an excellent case study in basic economic theory.
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- 2023
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49. Communication of palliative care needs in discharge letters from hospice providers to primary care: a multisite sequential explanatory mixed methods study
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Katharine Weetman, Jeremy Dale, Sarah J. Mitchell, Claire Ferguson, Anne M. Finucane, Peter Buckle, Elizabeth Arnold, Gemma Clarke, Despoina-Elvira Karakitsiou, Tracey McConnell, Nikhil Sanyal, Anna Schuberth, Georgia Tindle, Rachel Perry, Bhajneek Grewal, Katarzyna A. Patynowska, and John I. MacArtney
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Palliative care ,Hospice care ,Patient discharge summaries ,Transitional care ,Communication ,Special situations and conditions ,RC952-1245 - Abstract
Abstract Background The provision of palliative care is increasing, with many people dying in community-based settings. It is essential that communication is effective if and when patients transition from hospice to community palliative care. Past research has indicated that communication issues are prevalent during hospital discharges, but little is known about hospice discharges. Methods An explanatory sequential mixed methods study consisting of a retrospective review of hospice discharge letters, followed by hospice focus groups, to explore patterns in communication of palliative care needs of discharged patients and describe why these patients were being discharged. Discharge letters were extracted for key content information using a standardised form. Letters were then examined for language patterns using a linguistic methodology termed corpus linguistics. Thematic analysis was used to analyse the focus group transcripts. Findings were triangulated to develop an explanatory understanding of discharge communication from hospice care. Results We sampled 250 discharge letters from five UK hospices whereby patients had been discharged to primary care. Twenty-five staff took part in focus groups. The main reasons for discharge extracted from the letters were symptoms “managed/resolved” (75.2%), and/or the “patient wishes to die/for care at home” (37.2%). Most patients had some form of physical needs documented on the letters (98.4%) but spiritual needs were rarely documented (2.4%). Psychological/emotional needs and social needs were documented in 46.4 and 35.6% of letters respectively. There was sometimes ambiguity in “who” will be following up “what” in the discharge letters, and whether described patients’ needs were resolved or ongoing for managing in the community setting. The extent to which patients received a copy of their discharge letter varied. Focus groups conveyed a lack of consensus on what constitutes “complexity” and “complex pain”. Conclusions The content and structure of discharge letters varied between hospices, although generally focused on physical needs. Our study provides insights into patterns associated with those discharged from hospice, and how policy and guidance in this area may be improved, such as greater consistency of sharing letters with patients. A patient-centred set of hospice-specific discharge letter principles could help improve future practice.
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- 2022
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50. Asymptomatic Plasmodium infection among primary schoolchildren and Anopheles-mediated malaria transmission: A cross-sectional study in Ouidah; south-western Benin
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Adandé A. Medjigbodo, Laurette Djossou, Constantin J. Adoha, Oswald Y. Djihinto, Aurore Ogouyemi-Hounto, Martin J. Donnelly, David Weetman, and Luc S. Djogbénou
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Asymptomatic ,Plasmodium falciparum ,Gametocyte ,An. gambiae ,Transmission ,Infectious and parasitic diseases ,RC109-216 - Abstract
Understanding the contribution of asymptomatic Plasmodium carriers in malaria transmission might be helpful to design and implement new control measures. The present study explored the prevalence of asymptomatic and symptomatic Plasmodium infections (asexual and sexual stages) and the contribution of asymptomatic P. falciparum carriers to Anopheles-mediated malaria transmission in Ouidah (Benin). Thick and thin blood smears were examined from finger-prick blood specimens using light microscopy, and the density of both asexual and sexual stages of Plasmodium species was calculated. Infectivity of gametocyte-infected blood samples to Anopheles gambiae was assessed through direct membrane feeding assays. The prevalence of asymptomatic Plasmodium infections was 28.73% (289/1006). All the asymptomatic gametocyte-carriers (19/19), with gametocytaemia ranging from 10 ̶ 1200 gametocytes/μL of blood, were infectious to An. gambiae mosquitoes. The mean oocyst prevalences varied significantly (χ2 = 16.42, df = 7, p = 0.02) among laboratory mosquito strains (6.9 ̶ 39.4%) and near-field mosquitoes (4.9 ̶ 27.2%). Likewise, significant variation (χ2 = 56.85, df = 7, p = 6.39 × 10−10) was observed in oocyst intensity. Our findings indicate that asymptomatic Plasmodium carriers could significantly contribute to malaria transmission. Overall, this study highlights the importance of diagnosing and treating asymptomatic and symptomatic infection carriers during malaria control programmes.
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- 2023
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