251 results on '"Weilin Sun"'
Search Results
2. Identification of differentially expressed miRNAs associated with diamide detoxification pathways in Spodoptera frugiperda
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Rashmi Manohar Mahalle, Weilin Sun, Omar A. Posos-Parra, Sunghoon Jung, David Mota-Sanchez, Barry R. Pittendrigh, and Keon Mook Seong
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Medicine ,Science - Abstract
Abstract The fall armyworm (FAW) Spodoptera frugiperda is a severe economic pest of multiple crops globally. Control of this pest is often achieved using insecticides; however, over time, S. frugiperda has developed resistance to new mode of action compounds, including diamides. Previous studies have indicated diamide resistance is a complex developmental process involving multiple detoxification genes. Still, the mechanism underlying the possible involvement of microRNAs in post-transcriptional regulation of resistance has not yet been elucidated. In this study, a global screen of microRNAs (miRNAs) revealed 109 known and 63 novel miRNAs. Nine miRNAs (four known and five novel) were differentially expressed between insecticide-resistant and -susceptible strains. Gene Ontology analysis predicted putative target transcripts of the differentially expressed miRNAs encoding significant genes belonging to detoxification pathways. Additionally, miRNAs are involved in response to diamide exposure, indicating they are probably associated with the detoxification pathway. Thus, this study provides comprehensive evidence for the link between repressed miRNA expression and induced target transcripts that possibly mediate diamide resistance through post-transcriptional regulation. These findings highlight important clues for further research to unravel the roles and mechanisms of miRNAs in conferring diamide resistance.
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- 2024
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3. A nomogram to predict the risk of colorectal anastomotic leakage combining inflammatory-nutritional and abdominal aorta calcium index
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Zhaoxiong Zhang, Weilin Sun, Jun Wang, Yuanlin Deng, Yongjia Yan, Dong Li, and Weihua Fu
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arterial calcification ,anastomotic fistula ,colorectal cancer ,inflammation ,nutrition ,Surgery ,RD1-811 - Abstract
BackgroundAnastomotic leakage is a serious complication after colorectal cancer surgery, which affects the quality of life and the prognosis. This study aims to create a novel nomogram to predict the risk of anastomotic leakage for patients with colorectal cancer based on the preoperative inflammatory-nutritional index and abdominal aorta calcium index.Methods292 patients at Tianjin Medical University General Hospital (Tianjin, China) from January 2018 to October 2021 who underwent colorectal cancer surgery with a primary anastomosis were retrospectively reviewed. A nomogram was constructed based on the results of multivariate logistic regression model. The calibration curves and receiver operating characteristic curves were used to verify the efficacy of the nomogram.ResultsUnivariate and multivariate analyses showed that tumor location (P = 0.002), preoperative albumin (P = 0.006), preoperative lymphocyte (P = 0.035), preoperative neutrophil to lymphocyte ratio (P = 0.024), and superior mesenteric artery calcium volumes score (P = 0.004) were identified as the independent risk factors for postoperative anastomotic leakage in patients with colorectal carcinoma. A nomogram was constructed based on the results of the multivariate analysis, and the C-index of the calibration curves was 0.913 (95%CI: 0.870–0.957) in the training cohort and 0.840 (95%CI: 0.753–0.927) in the validation cohort.ConclusionThe nomogram, combining basic variables, inflammatory-nutritional index and abdominal aorta calcium index, could effectively predict the possibility of postoperative anastomotic leakage for patients with colorectal cancer, which could guide surgeons to carry out the appropriate treatment for the prevention of anastomotic leakage.
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- 2023
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4. Chemical tools for epichaperome-mediated interactome dysfunctions of the central nervous system
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Alexander Bolaender, Danuta Zatorska, Huazhong He, Suhasini Joshi, Sahil Sharma, Chander S. Digwal, Hardik J. Patel, Weilin Sun, Brandon S. Imber, Stefan O. Ochiana, Maulik R. Patel, Liza Shrestha, Smit. K. Shah, Shuo Wang, Rashad Karimov, Hui Tao, Pallav D. Patel, Ananda Rodilla Martin, Pengrong Yan, Palak Panchal, Justina Almodovar, Adriana Corben, Andreas Rimner, Stephen D. Ginsberg, Serge Lyashchenko, Eva Burnazi, Anson Ku, Teja Kalidindi, Sang Gyu Lee, Milan Grkovski, Bradley J. Beattie, Pat Zanzonico, Jason S. Lewis, Steve Larson, Anna Rodina, Nagavarakishore Pillarsetty, Viviane Tabar, Mark P. Dunphy, Tony Taldone, Fumiko Shimizu, and Gabriela Chiosis
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Science - Abstract
Here, the authors show structural, biochemical, and functional insights into the discovery of epichaperome‐ directed chemical probes for use in central nervous system diseases. Probes emerging from this work have translated to human clinical studies in Alzheimer’s disease and cancer.
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- 2021
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5. DNMT3A-mediated silence in ADAMTS9 expression is restored by RNF180 to inhibit viability and motility in gastric cancer cells
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Weilin Sun, Gang Ma, Li Zhang, Pengliang Wang, Nannan Zhang, Zizhen Wu, Yinping Dong, Fenglin Cai, Liqiao Chen, Huifang Liu, Han liang, and Jingyu Deng
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Cytology ,QH573-671 - Abstract
Abstract ADAMTS9 belongs to the ADAMTS (a disintegrin and metalloproteinase with thrombospondin motifs) protein family, and its expression is frequently silenced due to promoter hypermethylation in various human cancers. However, the underlying mechanisms remain largely unknown. In this study, we investigated the inhibitory effects of ADAMTS9 on gastric cancer (GC) cells. We initially examined ADAMTS9 protein level in 135 GC and adjacent normal tissue pairs, showing that ADAMTS9 was strikingly decreased in the malignant specimens and patients with low ADAMTS9 expression exhibited more malignant phenotypes and poorer outcome. ADAMTS9 expression was restored in AGS and BGC-823 cells, which then markedly suppressed cellular viability and motility in vitro and in vivo. As ADAMTS9 was enriched in the nuclei of gastric mucosal cells, RNA-sequencing experiment showed that ADAMTS9 significantly altered gene expression profile in BGC-823 cells. Additionally, DNA methyltransferase 3α (DNMT3A) was identified to be responsible for the hypermethylation of ADAMTS9 promoter, and this methyltransferase was ubiquitinated by ring finger protein 180 (RNF180) and then subject to proteasome-mediated degradation. In conclusion, we uncovered RNF180/DNMT3A/ADAMTS9 axis in GC cells and showed how the signaling pathway affected GC cells.
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- 2021
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6. CD40×HER2 bispecific antibody overcomes the CCL2-induced trastuzumab resistance in HER2-positive gastric cancer
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Tong Liu, Xi Wang, Li Lu, Hai Lin, Weilin Sun, Daohan Wang, Zhaoxiong Zhang, Yangpu Jia, Xinyang Nie, and Weihua Fu
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background There was much hard work to study the trastuzumab resistance in HER2-positive gastric cancer (GC), but the information which would reveal this abstruse mechanism is little. In this study, we aimed to investigate the roles of tumor cell-derived CCL2 on trastuzumab resistance and overcome the resistance by treatment with the anti-CD40-scFv-linked anti-HER2 (CD40 ×HER2) bispecific antibody (bsAb).Methods We measured the levels of CCL2 expression in HER2-positive GC tissues, and revealed biological functions of tumor cell-derived CCL2 on tumor-associated macrophages (TAMs) and the trastuzumab resistance. Then, we developed CD40 ×HER2 bsAb, and examined the targeting roles on HER2 and CD40, to overcome the trastuzumab resistance without systemic toxicity.Results We found the level of CCL2 expression in HER2-postive GC was correlated with infiltration of TAMs, polarization status of infiltrated TAMs, trastuzumab resistance and survival outcomes of GC patients. On exposure to CCL2, TAMs decreased the M1-like phenotype, thereby eliciting the trastuzumab resistance. CCL2 activated the transcription of ZC3H12A, which increased K63-linked deubiquitination and K48-linked auto-ubiquitination of TRAF6/3 to inactivate NF-κB signaling in TAMs. CD40 ×HER2 bsAb, which targeted the CD40 to restore the ubiquitination level of TRAF6/3, increased the M1-like phenotypic transformation of TAMs, and overcame trastuzumab resistance without immune-related adversary effects (irAEs).Conclusions We revealed a novel mechanism of trastuzumab resistance in HER2-positive GC via the CCL2-ZC3H12A-TRAF6/3 signaling axis, and presented a CD40 ×HER2 bsAb which showed great antitumor efficacy with few irAEs.
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- 2022
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7. The epichaperome is a mediator of toxic hippocampal stress and leads to protein connectivity-based dysfunction
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Maria Carmen Inda, Suhasini Joshi, Tai Wang, Alexander Bolaender, Srinivasa Gandu, John Koren III, Alicia Yue Che, Tony Taldone, Pengrong Yan, Weilin Sun, Mohammad Uddin, Palak Panchal, Matthew Riolo, Smit Shah, Afsar Barlas, Ke Xu, Lon Yin L. Chan, Alexandra Gruzinova, Sarah Kishinevsky, Lorenz Studer, Valentina Fossati, Scott A. Noggle, Julie R. White, Elisa de Stanchina, Sonia Sequeira, Kyle H. Anthoney, John W. Steele, Katia Manova-Todorova, Sujata Patil, Mark P. Dunphy, NagaVaraKishore Pillarsetty, Ana C. Pereira, Hediye Erdjument-Bromage, Thomas A. Neubert, Anna Rodina, Stephen D. Ginsberg, Natalia De Marco Garcia, Wenjie Luo, and Gabriela Chiosis
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Science - Abstract
The biology of Alzheimer’s disease (AD) remains unknown. We propose AD is a protein connectivity-based dysfunction disorder whereby a switch of the chaperome into epichaperomes rewires proteome-wide connectivity, leading to brain circuitry malfunction that can be corrected by novel therapeutics.
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- 2020
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8. Construction and Validation of a Nomogram for the Preoperative Prediction of Lymph Node Metastasis in Gastric Cancer
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Shilong Li, Zongxian Zhao, Huaxiang Yang, Daohan Wang, Weilin Sun, Shuliang Li, Zhaoxiong Zhang, and Weihua Fu MD
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background: Increasing evidence indicated that the tumor microenvironment (TME) plays a critical role in tumor progression. This study aimed to identify and evaluate mRNA signature involved in lymph node metastasis (LNM) in TME for gastric cancer (GC). Methods: Gene expression and clinical data were downloaded from The Cancer Genome Atlas (TCGA). The ESTIMATE algorithm was used to evaluate the TME of GC. The heatmap and Venn plots were applied for visualizing and screening out intersect differentially expressed genes (DEGs) involved in LNM in TME. Functional enrichment analysis, gene set enrichment analysis (GSEA) and protein-protein interaction (PPI) network were also conducted. Furthermore, binary logistic regression analysis were employed to develop a 4-mRNAs signature for the LNM prediction. ROC curves were applied to validate the LNM predictive ability of the riskscore. Nomogram was constructed and calibration curve was plotted to verify the predictive power of nomogram. Results: A total of 88 LNM related DEGs were identified. Functional enrichment analysis and GSEA implied that those genes were associated with some biological processes, such as ion transportation, lipid metabolism and thiolester hydrolase activity. After univariate and multivariate logistic regression analysis, 4 mRNAs (RASSF2, MS4A2, ANKRD33B and ADH1B) were eventually screened out to develop a predictive model. ROC curves manifested the good performance of the 4-mRNAs signature. The proportion of patients with LNM in high-risk group was significantly higher than that in low-risk group. The C-index of nomogram from training and test cohorts were 0.865 and 0.765, and the nomogram was well calibrated. Conclusions: In general, we identified a 4-mRNAs signature that effectively predicted LNM in GC patients. Moreover, the 4-mRNAs signature and nomogram provide a guidance for the preoperative evaluation and postoperative treatment of GC patients.
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- 2021
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9. Molecular Stressors Engender Protein Connectivity Dysfunction through Aberrant N-Glycosylation of a Chaperone
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Pengrong Yan, Hardik J. Patel, Sahil Sharma, Adriana Corben, Tai Wang, Palak Panchal, Chenghua Yang, Weilin Sun, Thais L. Araujo, Anna Rodina, Suhasini Joshi, Kenneth Robzyk, Srinivasa Gandu, Julie R. White, Elisa de Stanchina, Shanu Modi, Yelena Y. Janjigian, Elizabeth G. Hill, Bei Liu, Hediye Erdjument-Bromage, Thomas A. Neubert, Nanette L.S. Que, Zihai Li, Daniel T. Gewirth, Tony Taldone, and Gabriela Chiosis
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chaperome-mediated protein connectivity dysfunction ,epichaperome ,stress-mediated molecular dysfunction ,protein mis-assembly ,stable protein assembly ,targeted protein degradation-based therapeutics ,Biology (General) ,QH301-705.5 - Abstract
Summary: Stresses associated with disease may pathologically remodel the proteome by both increasing interaction strength and altering interaction partners, resulting in proteome-wide connectivity dysfunctions. Chaperones play an important role in these alterations, but how these changes are executed remains largely unknown. Our study unveils a specific N-glycosylation pattern used by a chaperone, Glucose-regulated protein 94 (GRP94), to alter its conformational fitness and stabilize a state most permissive for stable interactions with proteins at the plasma membrane. This “protein assembly mutation’ remodels protein networks and properties of the cell. We show in cells, human specimens, and mouse xenografts that proteome connectivity is restorable by inhibition of the N-glycosylated GRP94 variant. In summary, we provide biochemical evidence for stressor-induced chaperone-mediated protein mis-assemblies and demonstrate how these alterations are actionable in disease.
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- 2020
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10. Dietary antioxidants impact DDT resistance in Drosophila melanogaster.
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Gamal A M Abdu-Allah, Keon Mook Seong, Omprakash Mittapalli, James Adebayo Ojo, Weilin Sun, Omar Posos-Parra, David Mota-Sanchez, John M Clark, and Barry R Pittendrigh
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Medicine ,Science - Abstract
Insects experience a diversity of subtoxic and/or toxic xenobiotics through exposure to pesticides and, in the case of herbivorous insects, through plant defensive compounds in their diets. Many insects are also concurrently exposed to antioxidants in their diets. The impact of dietary antioxidants on the toxicity of xenobiotics in insects is not well understood, in part due to the challenge of developing appropriate systems in which doses and exposure times (of both the antioxidants and the xenobiotics) can be controlled and outcomes can be easily measured. However, in Drosophila melanogaster, a well-established insect model system, both dietary factors and pesticide exposure can be easily controlled. Additionally, the mode of action and xenobiotic metabolism of dichlorodiphenyltrichloroethane (DDT), a highly persistent neurotoxic organochlorine insecticide that is detected widely in the environment, have been well studied in DDT-susceptible and -resistant strains. Using a glass-vial bioassay system with blue diet as the food source, seven compounds with known antioxidant effects (ascorbic acid, β-carotene, glutathione, α-lipoic acid, melatonin, minocycline, and serotonin) were orally tested for their impact on DDT toxicity across three strains of D. melanogaster: one highly susceptible to DDT (Canton-S), one mildly susceptible (91-C), and one highly resistant (91-R). Three of the antioxidants (serotonin, ascorbic acid, and β-carotene) significantly impacted the toxicity of DDT in one or more strains. Fly strain and gender, antioxidant type, and antioxidant dose all affected the relative toxicity of DDT. Our work demonstrates that dietary antioxidants can potentially alter the toxicity of a xenobiotic in an insect population.
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- 2020
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11. Facile preparation of a novel nickel-containing metallopolymer via RAFT polymerization
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Rong Ren, Yanhua Wang, Dizheng Liu, and Weilin Sun
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Metallopolymer ,RAFT polymerization ,Polymers and polymer manufacture ,TP1080-1185 - Abstract
While the metallocene polymers were comprehensively studied, other metallopolymers are rarely explored. The major challenge is the lack of a synthetic platform for the preparation of metal coordinated derivatives, monomers, and polymers. Therefore, the development of a facile synthesis of new metal coordinated monomers and polymers is critically needed. A novel successfully synthesized methacrylate-containing nickel complex is reported in this communication. Controlled RAFT polymerizations are further carried out to prepare a series of side-chain nickel containing polymers with different molecular weight and narrow Polydispersity Index (PDI). This new metallopolymer performs specific electrochemical and excellent thermal properties. This study provides a novel and convenient strategy to prepare metallopolymer with controllable molecular weight, which has potential applications in assembled, catalytic and magnetic materials.
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- 2017
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12. The complete mitochondrial genome of Anoplocnemis curvipes F. (Coreinea, Coreidae, Heteroptera), a pest of fresh cowpea pods
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M. Carmen Valero, James Adebayo Ojo, Weilin Sun, Manuele Tamò, Brad S. Coates, and Barry R. Pittendrigh
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anoplocnemis curvipes ,mitochondrial genome ,dna sequence ,phylogenetic ,Genetics ,QH426-470 - Abstract
The complete 16,345-bp mitochondrial genome of the agriculturally destructive pod sucking pest, the giant coreid bug, Anoplocnemis curvipes (Hemiptera: Coreidae), was assembled from paired-end Illumina HiSeq 2500 reads. The A. curvipes mitochondrial genome consists of 13 protein coding genes (PCGs), 22 tRNAs, 2 rRNAs and a control region in the order and orientation typical among insects. PCG initiation codons (ATG, ATC, ATT and ATA) with termination codon (TAA) are used with the exception of TAG stop codons by Cytb and ND3. All tRNA genes fold into predicted cloverleaf secondary structures having requisite triplets on the anticodon loop, apart from tRNA-Ser1 (AGN) whose dihydrouridine (DHU) arm forms a simple loop. The phylogenetic analysis of hemipteran mitogenomes clusters to the family level and supports the monophyly of the five superfamilies in Pentatomomorpha of Hemiptera. The Coreoidea and Pyrrhocoroidea are sister groups, while Coreidae and Alydidae are sister groups to Rhopalidae. These analyses provide insight to mitogenomics and evolutionary relationships among pentatomoid insects.
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- 2017
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13. Selective sweep analysis in the genomes of the 91-R and 91-C Drosophila melanogaster strains reveals few of the 'usual suspects' in dichlorodiphenyltrichloroethane (DDT) resistance.
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Laura D Steele, Brad Coates, M Carmen Valero, Weilin Sun, Keon Mook Seong, William M Muir, John M Clark, and Barry R Pittendrigh
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Medicine ,Science - Abstract
Adaptation of insect phenotypes for survival after exposure to xenobiotics can result from selection at multiple loci with additive genetic effects. To the authors' knowledge, no selective sweep analysis has been performed to identify such loci in highly dichlorodiphenyltrichloroethane (DDT) resistant insects. Here we compared a highly DDT resistant phenotype in the Drosophila melanogaster (Drosophila) 91-R strain to the DDT susceptible 91-C strain, both of common origin. Whole genome re-sequencing data from pools of individuals was generated separately for 91-R and 91-C, and mapped to the reference Drosophila genome assembly (v. 5.72). Thirteen major and three minor effect chromosome intervals with reduced nucleotide diversity (π) were identified only in the 91-R population. Estimates of Tajima's D (D) showed corresponding evidence of directional selection in these same genome regions of 91-R, however, no similar reductions in π or D estimates were detected in 91-C. An overabundance of non-synonymous proteins coding to synonymous changes were identified in putative open reading frames associated with 91-R. Except for NinaC and Cyp4g1, none of the identified genes were the 'usual suspects' previously observed to be associated with DDT resistance. Additionally, up-regulated ATP-binding cassette transporters have been previously associated with DDT resistance; however, here we identified a structurally altered MDR49 candidate resistance gene. The remaining fourteen genes have not previously been shown to be associated with DDT resistance. These results suggest hitherto unknown mechanisms of DDT resistance, most of which have been overlooked in previous transcriptional studies, with some genes having orthologs in mammals.
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- 2015
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14. A glycine insertion in the estrogen-related receptor (ERR) is associated with enhanced expression of three cytochrome P450 genes in transgenic Drosophila melanogaster.
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Weilin Sun, M Carmen Valero, Keon Mook Seong, Laura D Steele, I-Ting Huang, Chien-Hui Lee, John M Clark, Xinghui Qiu, and Barry R Pittendrigh
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Medicine ,Science - Abstract
Insecticide-resistant Drosophila melanogaster strains represent a resource for the discovery of the underlying molecular mechanisms of cytochrome P450 constitutive over-expression, even if some of these P450s are not directly involved in the resistance phenotype. For example, in select 4,4'-dichlorodiphenyltrichloroethane (DDT) resistant strains the glucocorticoid receptor-like (GR-like) potential transcription factor binding motifs (TFBMs) have previously been shown to be associated with constitutively differentially-expressed cytochrome P450s, Cyp12d1, Cyp6g2 and Cyp9c1. However, insects are not known to have glucocorticoids. The only ortholog to the mammalian glucocorticoid receptor (GR) in D. melanogaster is an estrogen-related receptor (ERR) gene, which has two predicted alternative splice isoforms (ERRa and ERRb). Sequencing of ERRa and ERRb in select DDT susceptible and resistant D. melanogaster strains has revealed a glycine (G) codon insertion which was only observed in the ligand binding domain of ERR from the resistant strains tested (ERR-G). Transgenic flies, expressing the ERRa-G allele, constitutively over-expressed Cyp12d1, Cyp6g2 and Cyp9c1. Only Cyp12d1 and Cyp6g2 were over-expressed in the ERRb-G transgenic flies. Phylogenetic studies show that the G-insertion appeared to be located in a less conserved domain in ERR and this insertion is found in multiple species across the Sophophora subgenera.
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- 2015
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15. Venus: Enhancing QoE of Crowdsourced Live Video Streaming by Exploiting Multiflow Viewer Assistance.
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Huanhuan Zhang, Congkai An, Anfu Zhou, Yifan Zhu, Weilin Sun, Yixuan Lu, Jiahao Chen, Liang Liu 0001, Huadong Ma, and Aiguo Fei
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- 2024
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16. Genetic differentiation among Maruca vitrata F. (Lepidoptera: Crambidae) populations on cultivated cowpea and wild host plants: implications for insect resistance management and biological control strategies.
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Tolulope A Agunbiade, Brad S Coates, Benjamin Datinon, Rousseau Djouaka, Weilin Sun, Manuele Tamò, and Barry R Pittendrigh
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Medicine ,Science - Abstract
Maruca vitrata Fabricius (Lepidoptera: Crambidae) is a polyphagous insect pest that feeds on a variety of leguminous plants in the tropics and subtropics. The contribution of host-associated genetic variation on population structure was investigated using analysis of mitochondrial cytochrome oxidase 1 (cox1) sequence and microsatellite marker data from M. vitrata collected from cultivated cowpea (Vigna unguiculata L. Walp.), and alternative host plants Pueraria phaseoloides (Roxb.) Benth. var. javanica (Benth.) Baker, Loncocarpus sericeus (Poir), and Tephrosia candida (Roxb.). Analyses of microsatellite data revealed a significant global FST estimate of 0.05 (P≤0.001). The program STRUCTURE estimated 2 genotypic clusters (co-ancestries) on the four host plants across 3 geographic locations, but little geographic variation was predicted among genotypes from different geographic locations using analysis of molecular variance (AMOVA; among group variation -0.68%) or F-statistics (FSTLoc = -0.01; P = 0.62). These results were corroborated by mitochondrial haplotype data (φSTLoc = 0.05; P = 0.92). In contrast, genotypes obtained from different host plants showed low but significant levels of genetic variation (FSTHost = 0.04; P = 0.01), which accounted for 4.08% of the total genetic variation, but was not congruent with mitochondrial haplotype analyses (φSTHost = 0.06; P = 0.27). Variation among host plants at a location and host plants among locations showed no consistent evidence for M. vitrata population subdivision. These results suggest that host plants do not significantly influence the genetic structure of M. vitrata, and this has implications for biocontrol agent releases as well as insecticide resistance management (IRM) for M. vitrata in West Africa.
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- 2014
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17. Genome-wide sequencing and an open reading frame analysis of dichlorodiphenyltrichloroethane (DDT) susceptible (91-C) and resistant (91-R) Drosophila melanogaster laboratory populations.
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Laura D Steele, William M Muir, Keon Mook Seong, M Carmen Valero, Madhumitha Rangesa, Weilin Sun, John M Clark, Brad Coates, and Barry R Pittendrigh
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Medicine ,Science - Abstract
The Drosophila melanogaster 91-R and 91-C strains are of common origin, however, 91-R has been intensely selected for dichlorodiphenyltrichloroethane (DDT) resistance over six decades while 91-C has been maintained as the non-selected control strain. These fly strains represent a unique genetic resource to understand the accumulation and fixation of mutations under laboratory conditions over decades of pesticide selection. Considerable research has been done to investigate the differential expression of genes associated with the highly DDT resistant strain 91-R, however, with the advent of whole genome sequencing we can now begin to develop an in depth understanding of the genomic changes associated with this intense decades-long xenobiotic selection pressure. Here we present the first whole genome sequencing analysis of the 91-R and 91-C fly strains to identify genome-wide structural changes within the open reading frames. Between-strain changes in allele frequencies revealed a higher percent of new alleles going to fixation for the 91-R strain, as compared to 91-C (P
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- 2014
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18. Development of reference transcriptomes for the major field insect pests of cowpea: a toolbox for insect pest management approaches in west Africa.
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Tolulope A Agunbiade, Weilin Sun, Brad S Coates, Rousseau Djouaka, Manuele Tamò, Malick N Ba, Clementine Binso-Dabire, Ibrahim Baoua, Brett P Olds, and Barry R Pittendrigh
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Medicine ,Science - Abstract
Cowpea is a widely cultivated and major nutritional source of protein for many people that live in West Africa. Annual yields and longevity of grain storage is greatly reduced by feeding damage caused by a complex of insect pests that include the pod sucking bugs, Anoplocnemis curvipes Fabricius (Hemiptera: Coreidae) and Clavigralla tomentosicollis Stål (Hemiptera: Coreidae); as well as phloem-feeding cowpea aphids, Aphis craccivora Koch (Hemiptera: Aphididae) and flower thrips, Megalurothrips sjostedti Trybom (Thysanoptera: Thripidae). Efforts to control these pests remain a challenge and there is a need to understand the structure and movement of these pest populations in order to facilitate the development of integrated pest management strategies (IPM). Molecular tools have the potential to help facilitate a better understanding of pest populations. Towards this goal, we used 454 pyrosequencing technology to generate 319,126, 176,262, 320,722 and 227,882 raw reads from A. curvipes, A. craccivora, C. tomentosicollis and M. sjostedti, respectively. The reads were de novo assembled into 11,687, 7,647, 10,652 and 7,348 transcripts for A. curvipes, A. craccivora, C. tomentosicollis and M. sjostedti, respectively. Functional annotation of the resulting transcripts identified genes putatively involved in insecticide resistance, pathogen defense and immunity. Additionally, sequences that matched the primary aphid endosymbiont, Buchnera aphidicola, were identified among A. craccivora transcripts. Furthermore, 742, 97, 607 and 180 single nucleotide polymorphisms (SNPs) were respectively predicted among A. curvipes, A. craccivora, C. tomentosicollis and M. sjostedti transcripts, and will likely be valuable tools for future molecular genetic marker development. These results demonstrate that Roche 454-based transcriptome sequencing could be useful for the development of genomic resources for cowpea pest insects in West Africa.
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- 2013
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19. Transcriptome sequencing, and rapid development and application of SNP markers for the legume pod borer Maruca vitrata (Lepidoptera: Crambidae).
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Venu M Margam, Brad S Coates, Darrell O Bayles, Richard L Hellmich, Tolulope Agunbiade, Manfredo J Seufferheld, Weilin Sun, Jeremy A Kroemer, Malick N Ba, Clementine L Binso-Dabire, Ibrahim Baoua, Mohammad F Ishiyaku, Fernando G Covas, Ramasamy Srinivasan, Joel Armstrong, Larry L Murdock, and Barry R Pittendrigh
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Medicine ,Science - Abstract
The legume pod borer, Maruca vitrata (Lepidoptera: Crambidae), is an insect pest species of crops grown by subsistence farmers in tropical regions of Africa. We present the de novo assembly of 3729 contigs from 454- and Sanger-derived sequencing reads for midgut, salivary, and whole adult tissues of this non-model species. Functional annotation predicted that 1320 M. vitrata protein coding genes are present, of which 631 have orthologs within the Bombyx mori gene model. A homology-based analysis assigned M. vitrata genes into a group of paralogs, but these were subsequently partitioned into putative orthologs following phylogenetic analyses. Following sequence quality filtering, a total of 1542 putative single nucleotide polymorphisms (SNPs) were predicted within M. vitrata contig assemblies. Seventy one of 1078 designed molecular genetic markers were used to screen M. vitrata samples from five collection sites in West Africa. Population substructure may be present with significant implications in the insect resistance management recommendations pertaining to the release of biological control agents or transgenic cowpea that express Bacillus thuringiensis crystal toxins. Mutation data derived from transcriptome sequencing is an expeditious and economical source for genetic markers that allow evaluation of ecological differentiation.
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- 2011
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20. Systems-scale analysis reveals pathways involved in cellular response to methamphetamine.
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Lijie Sun, Hong-Mei Li, Manfredo J Seufferheld, Kent R Walters, Venu M Margam, Amber Jannasch, Naomi Diaz, Catherine P Riley, Weilin Sun, Yueh-Feng Li, William M Muir, Jun Xie, Jing Wu, Fan Zhang, Jake Y Chen, Eric L Barker, Jiri Adamec, and Barry R Pittendrigh
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Medicine ,Science - Abstract
BACKGROUND: Methamphetamine (METH), an abused illicit drug, disrupts many cellular processes, including energy metabolism, spermatogenesis, and maintenance of oxidative status. However, many components of the molecular underpinnings of METH toxicity have yet to be established. Network analyses of integrated proteomic, transcriptomic and metabolomic data are particularly well suited for identifying cellular responses to toxins, such as METH, which might otherwise be obscured by the numerous and dynamic changes that are induced. METHODOLOGY/RESULTS: We used network analyses of proteomic and transcriptomic data to evaluate pathways in Drosophila melanogaster that are affected by acute METH toxicity. METH exposure caused changes in the expression of genes involved with energy metabolism, suggesting a Warburg-like effect (aerobic glycolysis), which is normally associated with cancerous cells. Therefore, we tested the hypothesis that carbohydrate metabolism plays an important role in METH toxicity. In agreement with our hypothesis, we observed that increased dietary sugars partially alleviated the toxic effects of METH. Our systems analysis also showed that METH impacted genes and proteins known to be associated with muscular homeostasis/contraction, maintenance of oxidative status, oxidative phosphorylation, spermatogenesis, iron and calcium homeostasis. Our results also provide numerous candidate genes for the METH-induced dysfunction of spermatogenesis, which have not been previously characterized at the molecular level. CONCLUSION: Our results support our overall hypothesis that METH causes a toxic syndrome that is characterized by the altered carbohydrate metabolism, dysregulation of calcium and iron homeostasis, increased oxidative stress, and disruption of mitochondrial functions.
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- 2011
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21. Mitochondrial genome sequence and expression profiling for the legume pod borer Maruca vitrata (Lepidoptera: Crambidae).
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Venu M Margam, Brad S Coates, Richard L Hellmich, Tolulope Agunbiade, Manfredo J Seufferheld, Weilin Sun, Malick N Ba, Antoine Sanon, Clementine L Binso-Dabire, Ibrahim Baoua, Mohammad F Ishiyaku, Fernando G Covas, Ramasamy Srinivasan, Joel Armstrong, Larry L Murdock, and Barry R Pittendrigh
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Medicine ,Science - Abstract
We report the assembly of the 14,054 bp near complete sequencing of the mitochondrial genome of the legume pod borer (LPB), Maruca vitrata (Lepidoptera: Crambidae), which we subsequently used to estimate divergence and relationships within the lepidopteran lineage. The arrangement and orientation of the 13 protein-coding, 2 rRNA, and 19 tRNA genes sequenced was typical of insect mitochondrial DNA sequences described to date. The sequence contained a high A+T content of 80.1% and a bias for the use of codons with A or T nucleotides in the 3rd position. Transcript mapping with midgut and salivary gland ESTs for mitochondrial genome annotation showed that translation from protein-coding genes initiates and terminates at standard mitochondrial codons, except for the coxI gene, which may start from an arginine CGA codon. The genomic copy of coxII terminates at a T nucleotide, and a proposed polyadenylation mechanism for completion of the TAA stop codon was confirmed by comparisons to EST data. EST contig data further showed that mature M. vitrata mitochondrial transcripts are monocistronic, except for bicistronic transcripts for overlapping genes nd4/nd4L and nd6/cytb, and a tricistronic transcript for atp8/atp6/coxIII. This processing of polycistronic mitochondrial transcripts adheres to the tRNA punctuated cleavage mechanism, whereby mature transcripts are cleaved only at intervening tRNA gene sequences. In contrast, the tricistronic atp8/atp6/coxIII in Drosophila is present as separate atp8/atp6 and coxIII transcripts despite the lack of an intervening tRNA. Our results indicate that mitochondrial processing mechanisms vary between arthropod species, and that it is crucial to use transcriptional information to obtain full annotation of mitochondrial genomes.
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- 2011
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22. Assay strategies for the discovery and validation of therapeutics targeting Brugia pahangi Hsp90.
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Tony Taldone, Victoria Gillan, Weilin Sun, Anna Rodina, Pallav Patel, Kirsty Maitland, Kerry O'Neill, Gabriela Chiosis, and Eileen Devaney
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Arctic medicine. Tropical medicine ,RC955-962 ,Public aspects of medicine ,RA1-1270 - Abstract
The chemotherapy of lymphatic filariasis relies upon drugs such as diethylcarbamazine and ivermectin that largely target the microfilarial stages of the parasite, necessitating continued treatment over the long reproductive life span of the adult worm. The identification of compounds that target adult worms has been a long-term goal of WHO. Here we describe a fluorescence polarization assay for the identification of compounds that target Hsp90 in adult filarial worms. The assay was originally developed to identify inhibitors of Hsp90 in tumor cells, and relies upon the ability of small molecules to inhibit the binding of fluorescently labelled geldanamycin to Hsp90. We demonstrate that the assay works well with soluble extracts of Brugia, while extracts of the free-living nematode C. elegans fail to bind the probe, in agreement with data from other experiments. The assay was validated using known inhibitors of Hsp90 that compete with geldanamycin for binding to Hsp90, including members of the synthetic purine-scaffold series of compounds. The efficacy of some of these compounds against adult worms was confirmed in vitro. Moreover, the assay is sufficiently sensitive to differentiate between binding of purine-scaffold compounds to human and Brugia Hsp90. The assay is suitable for high-throughput screening and provides the first example of a format with the potential to identify novel inhibitors of Hsp90 in filarial worms and in other parasitic species where Hsp90 may be a target.
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- 2010
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23. Sequential Fusion of Multi-view Video Frames for 3D Scene Generation.
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Weilin Sun, Xiangxian Li, Manyi Li, Yuqing Wang, Yuze Zheng, Xiangxu Meng, and Lei Meng
- Published
- 2022
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24. Gesture based fear recognition using nonperformance dataset from VR horror games.
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Xinyi Fu, Cheng Xue, Qiuyi Yin, Yu Jiang, Ye Li, Yichen Cai, and Weilin Sun
- Published
- 2021
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25. Purrai: A Deep Neural Network based Approach to Interpret Domestic Cat Language.
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Weilin Sun, Vincent Lu, Aaron Truong, Hermione Bossolina, and Yuan Lu
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- 2021
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26. Comparative response of two seasonal spotted wing drosophila ( Drosophila suzukii ) morphs to different classes of insecticides
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Keon Mook Seong, Weilin Sun, Juan Huang, Larry Gut, Young Ho Kim, and Barry R. Pittendrigh
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Insect Science - Published
- 2022
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27. A novel brain penetrant PDGFRα inhibitor HY-008 is effective against glioblastoma
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Chenxin Xu, Haizhong Feng, and Weilin Sun
- Abstract
BackgroundGlioblastoma multiforme (GBM) is the most common primary intracranial malignant tumor in adults, with poor prognosis and high recurrence. Routine treatments of GBM show unsatisfactory efficiency in improving patients’ survival because of limited area of surgical resection and drug resistance. New therapeutic agents are needed to improve GBM treatment efficiency, but the blood-brain barrier (BBB) permeability is a major hurdle. Here, we report HY-008 as a promising therapeutic drug targeting PDGFRα signaling with high BBB permeability and efficient inhibiting effects both in vitro and in vivo.MethodsThrough structural modification and medicinal chemistry efforts, HY-007 and HY-008 were developed. The brain and plasma pharmacokinetic profiles of these two compounds were assessed. The inhibitory efficiency of HY-007 and HY-008 on GBM cell survival and PDGFRα signaling were evaluated. The efficacy of HY-007 and HY-008 as a single agent or HY-008 in combination with temozolomide (TMZ) was investigated using transformed mouse astrocyte and glioma stem-like cell (GSC) orthotopic xenograft models.ResultsHY-007 and HY-008 both had good brain permeability and desirable PK profiles with mild hERG inhibition, while HY-008 is more brain permeable than HY-007. In vitro, HY-007 and HY-008 both significantly inhibited viability of the established GBM cells with PDGF-A overexpression and transformed mouse astrocytes with PDGF-A/PDGFRα overexpression by targeting the PDGFRα signaling activated Erk1/2 and Akt. In vivo, HY-007 and HY-008 both effectively inhibited orthotopic GBM tumor xenograft growth and prolonged the survival of mice, and HY-008 showed less toxicity and better therapeutic effect. In addition, HY-008 increased sensitivity of TMZ, exhibited treatment efficiency both as a single agent and in combination with TMZ, providing significant survival benefits for GBM tumor xenograft-bearing mice.ConclusionsOur data demonstrate that HY-008 is a promising therapeutic agent in GBM treatment and a combination HY-008 with TMZ could serves as a potential efficient therapeutic option for improving GBM clinical treatment.
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- 2022
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28. Gesture based fear recognition using nonperformance dataset from VR horror games
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Cheng Xue, Xinyi Fu, Qiuyi Yin, Ye Li, Yichen Cai, Weilin Sun, and Yu Jiang
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Scheme (programming language) ,ComputingMethodologies_PATTERNRECOGNITION ,Modality (human–computer interaction) ,Data collection ,Modalities ,Computer science ,Speech recognition ,Emotion recognition ,Construct (philosophy) ,computer ,computer.programming_language ,Gesture - Abstract
Emotion recognition is a rising trend in related fields. Existing research mainly aims at the emotion recognition based on single or multi modalities on performance datasets. However, there is little research focusing on gesture-based emotion recognition using non-performance emotional datasets. In this article, we proposed a non-performance emotional data collection scheme using VR to construct a high-quality nonperformance dataset in gesture modality with fear labels. Then we proposed an optimized algorithm for gesture-based fear recognition using BLSTM on this dataset with the accuracy of up to 71.43%. Our work could be applied in many domains such as potentially domestic violence detection and VR game evaluation.
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- 2021
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29. Prognostic impact of D2-plus lymphadenectomy and optimal extent of lymphadenectomy in advanced gastric antral carcinoma: Propensity score matching analysis
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Jingyu Deng, Weilin Sun, Nannan Zhang, Jinyuan Liu, Han Liang, Yingxin Du, Wenting He, Pengliang Wang, Huifang Liu, Zizhen Wu, and Pengfei Gu
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Cancer Research ,medicine.medical_specialty ,medicine.medical_treatment ,Gastroenterology ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Carcinoma ,medicine ,metastasis ,Stage (cooking) ,Survival rate ,business.industry ,Hazard ratio ,Stomach ,Odds ratio ,medicine.disease ,Oncology ,030220 oncology & carcinogenesis ,Propensity score matching ,lymphadenectomy ,Lymphadenectomy ,Gastrectomy ,Original Article ,prognosis ,business ,neoplasm - Abstract
Objective To investigate the prognostic impact of D2-plus lymphadenectomy including the posterior (No. 8p, No. 12b/p, No. 13, and No. 14v), and para-aortic (No. 16a2, and No. 16b1) lymph nodes (LNs) in subtotal gastrectomy for advanced gastric antral carcinoma. Methods A total of 203 patients with advanced gastric cancer (GC) located in the antrum, who underwent R0 gastrectomy with D2 or D2-plus lymphadenectomy between January 2003 and December 2011 were enrolled. Propensity score matching was used to reduce the strength of the confounding factors to accurately evaluate prognoses. The therapeutic value index (TVI) was calculate to evaluate the survival benefit of dissecting each LN station. Results Of 102 patients with D2-plus lymphadenectomy, 21 (20.59%) were pathologically identified as having LN metastases beyond the extent of D2 lymphadenectomy. After matching, the overall survival (OS) was significantly better in the D2-plus than the D2 group (P=0.030). In the multivariate survival analysis, D2-plus lymphadenectomy (hazard ratio, 0.516; P=0.006) was confirmed to significantly improve the survival rate. In the logistic regression analysis, pN stage [odds ratio (OR), 2.533; 95% confidence interval (95% CI), 1.368-4.691; P=0.003] and extent of LNs metastasis (OR, 5.965; 95% CI, 1.335-26.650; P=0.019) were identified as independent risk factors for LN metastases beyond the extent of D2 lymphadenectomy. The TVI of patient with metastasis to LNs station was 7.1 (No. 8p), 5.7 (No. 12p), 5.1 (No. 13), and 7.1 (both No. 16a2 and No. 16b1), respectively. Conclusions D2-plus lymphadenectomy may improve the prognoses of some patients with advanced GC located in the antrum, especially for No. 8p, No. 12b, No. 13, and No. 16.
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- 2020
30. Facile Synthesis of Well‐Dispersed Pd Nanoparticles on Ti‐Doped CeO 2 Nanosheets and Their Use as Catalyst in the Hydrogenation of 4‐Nitrophenol
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Zhiquan Shen, Yanhua Wang, Yue Yan, Jun Ling, and Weilin Sun
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Inorganic Chemistry ,chemistry.chemical_compound ,Chemical engineering ,Chemistry ,Pd nanoparticles ,Doping ,Nanoparticle ,4-Nitrophenol ,Heterogeneous catalysis ,Catalysis - Published
- 2019
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31. CD40×HER2 bispecific antibody overcomes the CCL2-induced trastuzumab resistance in HER2-positive gastric cancer
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Weilin Sun, Xi Wang, Daohan Wang, Li Lu, Hai Lin, Zhaoxiong Zhang, Yangpu Jia, Xinyang Nie, Tong Liu, and Weihua Fu
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TNF Receptor-Associated Factor 6 ,Pharmacology ,Cancer Research ,Receptor, ErbB-2 ,Immunology ,Trastuzumab ,Oncology ,Stomach Neoplasms ,Humans ,Molecular Medicine ,Immunology and Allergy ,CD40 Antigens ,Chemokine CCL2 ,Signal Transduction - Abstract
BackgroundThere was much hard work to study the trastuzumab resistance in HER2-positive gastric cancer (GC), but the information which would reveal this abstruse mechanism is little. In this study, we aimed to investigate the roles of tumor cell-derived CCL2 on trastuzumab resistance and overcome the resistance by treatment with the anti-CD40-scFv-linked anti-HER2 (CD40 ×HER2) bispecific antibody (bsAb).MethodsWe measured the levels of CCL2 expression in HER2-positive GC tissues, and revealed biological functions of tumor cell-derived CCL2 on tumor-associated macrophages (TAMs) and the trastuzumab resistance. Then, we developed CD40 ×HER2 bsAb, and examined the targeting roles on HER2 and CD40, to overcome the trastuzumab resistance without systemic toxicity.ResultsWe found the level of CCL2 expression in HER2-postive GC was correlated with infiltration of TAMs, polarization status of infiltrated TAMs, trastuzumab resistance and survival outcomes of GC patients. On exposure to CCL2, TAMs decreased the M1-like phenotype, thereby eliciting the trastuzumab resistance. CCL2 activated the transcription of ZC3H12A, which increased K63-linked deubiquitination and K48-linked auto-ubiquitination of TRAF6/3 to inactivate NF-κB signaling in TAMs. CD40 ×HER2 bsAb, which targeted the CD40 to restore the ubiquitination level of TRAF6/3, increased the M1-like phenotypic transformation of TAMs, and overcame trastuzumab resistance without immune-related adversary effects (irAEs).ConclusionsWe revealed a novel mechanism of trastuzumab resistance in HER2-positive GC via the CCL2-ZC3H12A-TRAF6/3 signaling axis, and presented a CD40 ×HER2 bsAb which showed great antitumor efficacy with few irAEs.
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- 2022
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32. The complete mitochondrial genome of
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M Carmen, Valero, James Adebayo, Ojo, Weilin, Sun, Manuele, Tamò, Brad S, Coates, and Barry R, Pittendrigh
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mitochondrial genome ,DNA sequence ,Anoplocnemis curvipes ,phylogenetic ,Mitogenome Announcement ,Research Article - Abstract
The complete 16,345-bp mitochondrial genome of the agriculturally destructive pod sucking pest, the giant coreid bug, Anoplocnemis curvipes (Hemiptera: Coreidae), was assembled from paired-end Illumina HiSeq 2500 reads. The A. curvipes mitochondrial genome consists of 13 protein coding genes (PCGs), 22 tRNAs, 2 rRNAs and a control region in the order and orientation typical among insects. PCG initiation codons (ATG, ATC, ATT and ATA) with termination codon (TAA) are used with the exception of TAG stop codons by Cytb and ND3. All tRNA genes fold into predicted cloverleaf secondary structures having requisite triplets on the anticodon loop, apart from tRNA-Ser1 (AGN) whose dihydrouridine (DHU) arm forms a simple loop. The phylogenetic analysis of hemipteran mitogenomes clusters to the family level and supports the monophyly of the five superfamilies in Pentatomomorpha of Hemiptera. The Coreoidea and Pyrrhocoroidea are sister groups, while Coreidae and Alydidae are sister groups to Rhopalidae. These analyses provide insight to mitogenomics and evolutionary relationships among pentatomoid insects.
- Published
- 2021
33. RNF180 mediates STAT3 activity by regulating the expression of RhoC via the proteasomal pathway in gastric cancer cells
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Shiwei Guo, Jingyu Deng, Weilin Sun, Wenting He, Huifang Liu, Zhenzhen Zhao, Yingxin Du, Han Liang, P. Wang, Zizhen Wu, and Liqiao Chen
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STAT3 Transcription Factor ,0301 basic medicine ,Cancer Research ,Ubiquitin-Protein Ligases ,Immunology ,RhoC ,Article ,Small hairpin RNA ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,0302 clinical medicine ,Cell Movement ,Stomach Neoplasms ,Cell Line, Tumor ,Humans ,lcsh:QH573-671 ,STAT3 ,Cell Proliferation ,Expression vector ,biology ,lcsh:Cytology ,Chemistry ,Stomach ,Cell Biology ,Transfection ,Cell biology ,Ubiquitin ligase ,Gene Expression Regulation, Neoplastic ,030104 developmental biology ,rhoC GTP-Binding Protein ,030220 oncology & carcinogenesis ,Cancer cell ,biology.protein ,Phosphorylation ,Gastric cancer - Abstract
Background Ring finger protein 180 (RNF180) is an important member of the E3 ubiquitin ligase family. As a tumor suppressor gene, RNF180 is significantly associated with the prognosis of patients with gastric cancer (GC) and can inhibit the proliferation, invasion, and migration of GC cells. Signal transducer and activator of transcription 3 (STAT3) is considered one of the most common oncogenes in human cancers with a key role in GC progression. In this study, we explored the relationship between RNF180 and STAT3 in GC cells. Methods The RNF180 gene was significantly overexpressed to observe its regulatory activity on STAT3 and pSTAT3 in GC cells. We then explored the molecular signaling pathways by which RNF180 could potentially regulate STAT3 through transcriptomics and proteomics experiments. Results RNF180 overexpression could suppress STAT3 phosphorylation in GC cells. Ubiquitin label-free experiments showed that the ubiquitination level of Ras homolog gene family member C (RhoC) is significantly increased in GC cells transfected with an RNF180 expression vector (RNF180-GFP vector) compared with cells transfected with an empty vector (vehicle vector). We subsequently demonstrated that RNF180 could directly combine with RhoC and promote the ubiquitination and degradation of RhoC protein in GC cells. The phosphorylation level of STAT3 significantly decreased in GC cells after RhoC knockdown using small hairpin RNA(shRNA). Conclusions RNF180 could inhibit GC progression by reducing the phosphorylation of STAT3 via the ubiquitination and degradation of RhoC protein in GC cells. Thus, the protein may be considered a novel therapeutic target for patients with GC.
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- 2020
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34. Chemical tools for epichaperome-mediated interactome dysfunctions of the central nervous system
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Mark Dunphy, Brandon S Imber, Sang-gyu Lee, Teja Kalidindi, Justina Almodovar, Eva Burnazi, Bradley J. Beattie, Fumiko Shimizu, Anson Ku, Andreas Rimner, Pallav D. Patel, Adriana D. Corben, Milan Grkovski, Tony Taldone, Pat Zanzonico, Sahil Sharma, Rashad R. Karimov, Viviane Tabar, Anna Rodina, Stephen D. Ginsberg, Liza Shrestha, Danuta Zatorska, Jason S. Lewis, Suhasini Joshi, Weilin Sun, Nagavarakishore Pillarsetty, Palak Panchal, Serge K. Lyashchenko, Chander Singh Digwal, Stefan O. Ochiana, Ananda Rodilla Martin, Gabriela Chiosis, Pengrong Yan, Alexander Bolaender, Hardik J. Patel, Huazhong He, Steve Larson, Shuo Wang, Maulik R. Patel, Hui Tao, and Smit K. Shah
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Central Nervous System ,Proteome ,Cell Survival ,Science ,Central nervous system ,General Physics and Astronomy ,Single group ,Disease ,Computational biology ,Interactome ,General Biochemistry, Genetics and Molecular Biology ,Article ,Clinical study ,Mice ,MicroDose ,Protein Interaction Mapping ,Biomarkers, Tumor ,Medicine ,Animals ,Humans ,In patient ,HSP90 Heat-Shock Proteins ,Multidisciplinary ,Molecular medicine ,business.industry ,Extramural ,Brain Neoplasms ,General Chemistry ,medicine.anatomical_structure ,Blood-Brain Barrier ,Molecular Probes ,Positron-Emission Tomography ,Cancer imaging ,business ,Glioblastoma ,Chemical tools ,Molecular Chaperones - Abstract
Diseases are a manifestation of how thousands of proteins interact. In several diseases, such as cancer and Alzheimer’s disease, proteome-wide disturbances in protein-protein interactions are caused by alterations to chaperome scaffolds termed epichaperomes. Epichaperome-directed chemical probes may be useful for detecting and reversing defective chaperomes. Here we provide structural, biochemical, and functional insights into the discovery of epichaperome probes, with a focus on their use in central nervous system diseases. We demonstrate on-target activity and kinetic selectivity of a radiolabeled epichaperome probe in both cells and mice, together with a proof-of-principle in human patients in an exploratory single group assignment diagnostic study (ClinicalTrials.gov Identifier: NCT03371420). The clinical study is designed to determine the pharmacokinetic parameters and the incidence of adverse events in patients receiving a single microdose of the radiolabeled probe administered by intravenous injection. In sum, we introduce a discovery platform for brain-directed chemical probes that specifically modulate epichaperomes and provide proof-of-principle applications in their use in the detection, quantification, and modulation of the target in complex biological systems., Here, the authors show structural, biochemical, and functional insights into the discovery of epichaperome‐ directed chemical probes for use in central nervous system diseases. Probes emerging from this work have translated to human clinical studies in Alzheimer’s disease and cancer.
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- 2020
35. Should the left gastric artery lymph node be considered as the predictive lymph node for extra-gastric lymph node metastases?
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Jinyuan Liu, Han Liang, Weilin Sun, Jingyu Deng, Shiwei Guo, Zizhen Wu, Wenting He, and Pengfei Gu
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medicine.medical_specialty ,Left gastric artery ,business.industry ,Stomach ,medicine.medical_treatment ,Gastric Lymph Node ,digestive, oral, and skin physiology ,Cancer ,General Medicine ,medicine.disease ,Gastroenterology ,Metastasis ,03 medical and health sciences ,0302 clinical medicine ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,medicine.artery ,Internal medicine ,medicine ,030211 gastroenterology & hepatology ,Gastrectomy ,Original Article ,business ,Lymph node ,Survival rate - Abstract
Background To validate the prognostic impacts of the left gastric artery lymph node (No. 7 LN) metastasis and investigate whether the No. 7 LN metastasis should be considered as the predictive LN for extra-gastric LN metastases. Methods Between January 2003 and December 2011, a total of 1,586 patients who underwent R0 gastrectomy were retrospected. Patients with LN metastases were divided into three groups: (I) patients with only peri-gastric LN metastases (peri-gastric group); (II) patients with peri-gastric and only No. 7 LN metastases (No. 7 group); and (III) patients with other extra-gastric LN metastases (extra-gastric group). Propensity score matching (PSM) was adopted to accurately evaluate prognoses of all patients after surgery. Results Of 1,586 patients, 235 (14.82%) were pathologically identified to present with the No. 7 LN metastases. Patients with the No. 7 LN metastases presented the significantly lower survival rate both before and after adjustment by pTNM stage, compared to those without the No. 7 LN metastases. Patients in the No. 7 group were identified to present the significant lower survival rate than those in the peri-gastric group, and to present the similar median overall survival (OS) to those in the extra-gastric group. In addition, patients with extra-gastric LN except No. 7 LN metastases failed to show any superiority of survival outcomes, compared with those with extra-gastric LN metastases including the No. 7 LN metastasis. Conclusions The No. 7 LN metastases had the crucial survival implications. Nevertheless, the No. 7 LN failed to be considered as the predictive LN for the extra-gastric LN metastases in gastric cancer (GC).
- Published
- 2020
36. RNF180 Suppresses Methylation of ADAMTS9 DNA Promotor by Ubiquitinating DNMT3A Inhibiting Metastasis in Gastric Cancer
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Weilin Sun, Jingyu Deng, Gang Ma, Li Zhang, Pengliang Wang, Huifang Liu, Nannan Zhang, Zizhen Wu, Yinping Dong, Fenglin Cai, Liqiao Chen, Zhenzhen Zhao, and Han Liang
- Subjects
endocrine system - Abstract
BACKGROUND: A disintegrin-like and metalloprotease with thrombospondin type 1 motif 9 (ADAMTS9) is hypermethylated and inhibits the proliferation of various cancers. In this study, we demonstrated that the expression of ADAMTS9 was associated with the lymphatic metastasis of gastric cancer (GC) and elucidated the down- and upstream molecular pathways in GC progression.METHODS: The study explored the expression level, biological function, clinical application, and involved molecular mechanism of ADAMTS9 in GC.RESULTS: In 135 GC tissue samples, ADAMTS9 expression level was significantly correlated with the pN stage, the number of metastatic lymph nodes (LNs), and the overall survival of patients with GC. The in vitro and in vivo experiments showed that ADAMTS9 attenuated the viability and motile capacity of GC cells. Mechanistic investigations revealed that ADAMTS9 significantly inhibited the transcription of C–C motif chemokine ligand 5 (CCL5)/C–X–C motif chemokine ligand 11 (CXCL11). This effect impaired the migration and invasion in GC cells. This study revealed that the hypermethylation level in the promotor of ADAMTS9 gene was mainly mediated by DNA-methyltransferase(DNMT) 3A, which reduces ADAMTS9 expression in GC. Ring finger protein (RNF) 180 could promote DNMT3Aubiquitination and degradation, thereby restoring the ADAMTS9 expression in GC cells.CONCLUSIONS: ADAMTS9 expression is restored by the RNF180 via suppressing the promotor methylation of the ADAMTS9 gene. ADAMTS9 inhibits metastasis and improves the prognosis of patients with GC via CCL5/CXCL11-dependent pathway. Thus, ADAMTS9 should be considered as a predictor of LN metastasis and a therapeutic target in GC.
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- 2020
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37. Effects of a high body mass index on the short-term outcomes and prognosis after radical gastrectomy
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P. Wang, Han Liang, Pengfei Gu, Wei Zhao, Xinyu Wang, Zizhen Wu, Jingyu Deng, and Weilin Sun
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Adult ,Male ,Risk ,medicine.medical_specialty ,medicine.medical_treatment ,Fistula ,Gastroenterology ,Body Mass Index ,03 medical and health sciences ,0302 clinical medicine ,Postoperative Complications ,Surgical oncology ,Gastrectomy ,Stomach Neoplasms ,Internal medicine ,Intestinal Fistula ,Medicine ,Humans ,Obesity ,Aged ,Neoplasm Staging ,Retrospective Studies ,Perioperative management ,Radical gastrectomy ,business.industry ,nutritional and metabolic diseases ,Cancer ,Retrospective cohort study ,General Medicine ,Middle Aged ,Overweight ,medicine.disease ,Prognosis ,Survival Rate ,Treatment Outcome ,030220 oncology & carcinogenesis ,Lymph Node Excision ,030211 gastroenterology & hepatology ,Surgery ,Lymphadenectomy ,Female ,business ,Body mass index - Abstract
This study aimed to investigate the effects of a high body mass index (BMI) on the outcomes of radical gastrectomy for gastric cancer. We conducted a retrospective cohort study of 1729 patients with stage I to III gastric cancer who received open radical gastrectomy from February 2003 to August 2011. The patients were divided into 3 groups according to their BMI: a low BMI group (BMI
- Published
- 2020
38. Dietary antioxidant vitamin C influences the evolutionary path of insecticide resistance in Drosophila melanogaster
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John M. Clark, Barry R. Pittendrigh, Keon Mook Seong, Brad S. Coates, James Adebayo Ojo, Jingfei Huang, Ken N. Paige, Omprakash Mittapalli, and Weilin Sun
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Insecticides ,Antioxidant ,Pesticide resistance ,Health, Toxicology and Mutagenesis ,media_common.quotation_subject ,medicine.medical_treatment ,Insect ,Ascorbic Acid ,Antioxidants ,DDT ,Insecticide Resistance ,medicine ,Animals ,Humans ,Food science ,Drosophila ,media_common ,biology ,Vitamin C ,General Medicine ,Pesticide ,biology.organism_classification ,Phenotype ,Diet ,Drosophila melanogaster ,Agronomy and Crop Science - Abstract
Herbivorous insects encounter a variety of toxic environmental substances ranging from ingested plant defensive compounds to human-introduced insecticidal agents. Dietary antioxidants are known to reduce the negative physiological impacts of toxins in mammalian systems through amelioration of reactive oxygen-related cellular damage. The analogous impacts to insects caused by multigenerational exposure to pesticides and the effects on adaptive responses within insect populations, however, are currently unknown. To address these research gaps, we used Drosophila as a model system to explore adaptive phenotypic responses to acute dichlorodiphenyltrichloroethane (DDT) exposure in the presence of the dietary antioxidant vitamin C and to examine the structural genomic consequences of this exposure. DDT resistance increased significantly among four replicates exposed to a low concentration of DDT for 10 generations. In contrast, dietary intake of vitamin C significantly reduced DDT resistance after mutigenerational exposure to the same concentration of DDT. As to the genomic consequences, no significant differences were predicted in overall nucleotide substitution rates across the genome between any of the treatments. Despite this, replicates exposed to a low concentration of DDT without vitamin C showed the highest number of synonymous and non-synonymous variants (3196 in total), followed by the DDT plus vitamin C (1174 in total), and vitamin C alone (728 in total) treatments. This study demonstrates the potential role of diet (specifically, antioxidant intake) on adaptive genome responses, and thus on the evolution of pesticide resistance within insect populations.
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- 2020
39. One-pot 'grafting-from' synthesis of amphiphilic bottlebrush block copolymers containing PLA and PVP side chains via tandem ROP and RAFT polymerization
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Jun Ling, Rong Ren, Zhiquan Shen, Weilin Sun, and Yanhua Wang
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Polymers and Plastics ,Organic Chemistry ,technology, industry, and agriculture ,02 engineering and technology ,Raft ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Gel permeation chromatography ,chemistry.chemical_compound ,Monomer ,chemistry ,Polymerization ,Polymer chemistry ,Amphiphile ,Materials Chemistry ,Copolymer ,Side chain ,Reversible addition−fragmentation chain-transfer polymerization ,0210 nano-technology - Abstract
A one-pot “grafting-from” strategy is presented to prepare AB- and ABA-type bottlebrush block copolymers (BBCPs). Precursor block copolymers with pendant dithiocarbamate and hydroxyl groups were synthesized as the macroinitators. Polylactide (PLA) and poly(N-vinylpyrrolidone) (PVP) side chains were grafted by ring-opening polymerization (ROP) and reversible addition-fragmentation chain-transfer (RAFT) polymerization in one pot, respectively. Molecular weight control was achieved as evidenced by gel permeation chromatography (GPC) and 1H nuclear magnetic resonance (1H NMR). The length of side chains in each block (DP from 8 to 113) could be facilely tuned by polymerization conditions such as the reaction time and the feed ratio of monomer to initiator, leading to various molecular morphologies observed by atomic force microscopy (AFM). This synthetic strategy is flexible and adaptable, allowing convenient access to customized macromolecular architecture.
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- 2018
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40. Promoting the Competitiveness of China's Agricultural Industry in the New Development Stage: From an Industry Security Perspective
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Xiaojun Wang, Yangfen Chen, Guogang Wang, Junbiao Zhang, Weilin Sun, Lin Zhang, Linghong Xie, Shiping Mao, and Kongming Wu
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General Earth and Planetary Sciences ,General Environmental Science - Published
- 2022
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41. A high fluorescence rate is key for stable blue organic light-emitting diodes
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Taiju Tsuboi, Qisheng Zhang, Yan Yue, Chao Deng, Weilin Sun, Zhusen Liu, Xufeng Ni, and Fangyi Cao
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Annihilation ,Materials science ,Exciton ,Radiative decay ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Photochemistry ,01 natural sciences ,Luminance ,Decomposition ,Fluorescence ,0104 chemical sciences ,Materials Chemistry ,OLED ,0210 nano-technology ,Diode - Abstract
Singlet–singlet exciton annihilation (SSA) is found to be a critical factor for the decomposition of blue thermally activated delayed fluorescence (TADF) emitters in organic light-emitting diodes (OLEDs). Since radiative decay is a competitive process against bimolecular SSA, increasing the fluorescence rate (kF) of the blue TADF emitters can significantly prolong the device's operational lifetime by reducing the singlet exciton concentration at a given luminance level.
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- 2018
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42. Application and Research on Macroscopic Identification of Bitumen and Graptolite in Shale and Reflectance Detection
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Qiao Che, Wenxiang He, Jun Mao, Weilin Sun, and Xuemin Xu
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chemistry.chemical_classification ,Maturity (geology) ,chemistry ,Paleozoic ,Asphalt ,Shale gas ,Mineralogy ,Organic matter ,Vitrinite ,Oil shale ,Reflectivity ,Geology - Abstract
Longmaxi Formation of Lower Palaeozoic Silurian System in Northwest of Guizhou Province is an import target layer of shale gas exploration; the study of its organic matter maturity is a necessary indicator for evaluating the resources of shale gas. Because the Longmaxi shale does not contain any vitrinite; its thermal evolution must be tested by the shale asphalt reflectance and the graptolite reflectance. The DM4500 microscope is used to test the shale of Graptolite reflectance and asphalt reflectance. The results show that the shale graptolite reflectance is between 2.91% - 3.20%, average 3.08%; asphalt fragments reflectivity is between 2.93% - 3.19%, average 2.94%; amorphous bitumen reflectance is between 2.89% - 3.18%, average 2.89%. Graptolite reflectance is slightly higher than the reflectance of asphalt. The average of equivalent vitrinite reflectance is 2.06%; the equivalent vitrinite reflectance of asphalt debris is 2.20%, indicating that the shale of Northwest Guizhou Silurian Longmaxi has been in high-over mature stage of thermal evolution. The result of study provides a reliable parameter for the evaluation of shale gas resources in the area, and also shows the applicability of the evaluation of bitumen and graptolite reflectance of the maturity of organic matter of shale gas in the Silurian System.
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- 2018
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43. The mitogenome of the brown pod-sucking bug Clavigralla tomentosicollis Stäl (Hemiptera: Coreidae)
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Barry R. Pittendrigh, Venu M. Margam, Laura D. Steele, Brad S. Coates, James Adebayo Ojo, Manuele Tamò, Weilin Sun, Keon Mook Seong, and M. Carmen Valero
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0106 biological sciences ,0301 basic medicine ,Genetics ,education.field_of_study ,biology ,Coreoidea ,Coreidae ,Population ,food and beverages ,Ribosomal RNA ,biology.organism_classification ,01 natural sciences ,Agricultural and Biological Sciences (miscellaneous) ,Hemiptera ,Vigna ,010602 entomology ,03 medical and health sciences ,030104 developmental biology ,Tandem repeat ,Botany ,PEST analysis ,education ,Biotechnology - Abstract
The brown pod-sucking bug, Clavigralla tomentosicollis Stal (Hemiptera: Coreidae), causes significant damage to cultivated cowpea, Vigna unguiculata Walp, a staple crop in sub-Saharan Africa. C. tomentosicollis pierce and suck sap from cowpea pods, resulting in reduced grain yield and quality. The complete, 16,089 bp mitogenome of C. tomentosicollis encodes 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs), two ribosomal RNAs (rRNAs) and an A + T rich control region, with gene order and orientation identical to that of the insect ancestral gene order. The initiation and termination codons for the PCGs used standard ATN codons and TAA or TAG codons respectively. All predicted tRNAs fold into a clover-leaf secondary structures with the exception of tRNA-Ser (AGN) with a semi-loop dihydrouridine arm. The 1509 bps A + T rich region contains a single 89 bp tandem repeat unit duplicated 3.7 times. When compared with other published Coreoidea mitogenomes, C. tomentosicollis was also highly A − T skewed, and similar in both size and A − T%; however, its longer tandem repeat within the A + T rich region was unique. The C. tomentosicollis mitogenome can serve as a foundation to combine molecular marker data with pest monitoring strategies to better understand the population dynamics of this species.
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- 2017
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44. Comparison of the mitochondrial genomes of the Old and New World strains of the legume pod borer, Maruca vitrata (Lepidoptera: Crambidae)
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Brad S. Coates, Tolulope A. Agunbiade, Mu Rou Tsai, Weilin Sun, Maria C. Valero, Barry R. Pittendrigh, and Manuele Tamò
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0301 basic medicine ,Genetics ,Mitochondrial DNA ,Old World ,biology ,Pantropical ,Ribosomal RNA ,biology.organism_classification ,Genome ,03 medical and health sciences ,030104 developmental biology ,Crambidae ,Maruca vitrata ,Insect Science ,Synonymous substitution ,Ecology, Evolution, Behavior and Systematics - Abstract
Maruca vitrata(Fabricius, 1787) is a cryptic pantropical species of Lepidoptera that are comprised of two unique strains that inhabit the American continents (New World strain) and regions spanning from Africa through to Southeast Asia and Northern Australia (Old World strain). In this study, wede novoassembled the complete mitochondrial genome sequence of the New World legume pod borer,M. vitrata, from shotgun sequence data generated on an Illumina HiSeq 2000. Phylogenomic comparisons were made with other previously published mitochondrial genome sequences from crambid moths, including the Old World strain ofM.vitrata. The 15,385 bpM. vitrata(New World) sequence has an 80.7% A+T content and encodes the 13 protein-coding, 2 ribosomal RNA and 22 transfer RNA genes in the typical orientation and arrangement of lepidopteran mitochondrial DNAs. Mitochondrial genome-wide comparison between the New and Old World strains ofM. vitratadetected 476 polymorphic sites (4.23% nucleotide divergence) with an excess of synonymous substitution as a result of purifying selection. Furthermore, this level of sequence variation suggests that these strains diverged from ~1.83 to 2.12 million years ago, assuming a linear rate of short-term substitution. Thede novoassemblies of mitochondrial genomes from next-generation sequencing (NGS) reads provide readily available data for similar comparative studies.
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- 2017
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45. Brain Permeable Tafamidis Amide Analogs for Stabilizing TTR and Reducing APP Cleavage
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Jerry C. Chang, Anjana Sinha, Yue Ming Li, Xianzhong Wu, Paul Greengard, Weilin Sun, Subhash C. Sinha, Katherina Gindinova, Peng Xu, Younhee Cho, and Jeffery W. Kelly
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chemistry.chemical_classification ,Tafamidis ,medicine.diagnostic_test ,biology ,010405 organic chemistry ,Proteolysis ,Organic Chemistry ,Cleavage (embryo) ,01 natural sciences ,Biochemistry ,In vitro ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,chemistry.chemical_compound ,Transthyretin ,Piperazine ,Enzyme ,chemistry ,Amide ,Drug Discovery ,medicine ,biology.protein ,Biophysics - Abstract
[Image: see text] Tafamidis, 1, a potent transthyretin kinetic stabilizer, weakly inhibits the γ-secretase enzyme in vitro. We have synthesized four amide derivatives of 1. These compounds reduce production of the Aβ peptide in N2a695 cells but do not inhibit the γ-secretase enzyme in cell-free assays. By performing fluorescence correlation spectroscopy, we have shown that TTR inhibits Aβ oligomerization and that addition of tafamidis or its amide derivative does not affect TTR’s ability to inhibit Aβ oligomerization. The piperazine amide derivative of tafamidis (1a) efficiently penetrates and accumulates in mouse brain and undergoes proteolysis under physiological conditions in mice to produce tafamidis.
- Published
- 2019
46. Development of Gleevec Analogues for Reducing Production of β-Amyloid Peptides through Shifting β-Cleavage of Amyloid Precursor Proteins
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Weilin Sun, Katherina Gindinova, Subhash C. Sinha, Emily Chang, William J. Netzer, and Anjana Sinha
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Peptide ,Antineoplastic Agents ,Mice, Transgenic ,Pharmacology ,Cleavage (embryo) ,01 natural sciences ,Oral gavage ,Cell Line ,03 medical and health sciences ,Amyloid beta-Protein Precursor ,Mice ,Structure-Activity Relationship ,Drug Development ,β amyloid ,Alzheimer Disease ,Drug Discovery ,Amyloid precursor protein ,Animals ,Humans ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Amyloid beta-Peptides ,biology ,Chemistry ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,Imatinib mesylate ,biology.protein ,Imatinib Mesylate ,Molecular Medicine ,Female - Abstract
Imatinib mesylate, 1a, inhibits production of β-amyloid (Aβ) peptides both in cells and in animal models. It reduces both the β-secretase and γ-secretase cleavages of the amyloid precursor protein (APP) and mediates a synergistic effect, when combined with a β-secretase inhibitor, BACE IV. Toward developing more potent brain-permeable leads, we have synthesized and evaluated over 75 1a-analogues. Several compounds, including 2a–b and 3a–c, inhibited production of Aβ peptides with improved activity in cells. These compounds affected β-secretase cleavage of APP similarly to 1a. Compound 2a significantly reduced production of the Aβ42 peptide, when administered (100 mg/kg, twice daily by oral gavage) to 5 months old female mice for 5 days. A combination of compound 2a with BACE IV also reduced Aβ levels in cells, more than the additive effect of the two compounds. These results open a new avenue for developing treatments for Alzheimer’s disease using 1a-analogues.
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- 2019
47. Determination of vanadium, iron, and nickel in petroleum coke by laser-induced breakdown spectroscopy
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Jingqi Lu, Zhuang Zhuo, Weilin Sun, Peng Lu, Wenhao Zhang, and Tengfei Sun
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010302 applied physics ,Reproducibility ,Materials science ,010401 analytical chemistry ,Petroleum coke ,Analytical chemistry ,Vanadium ,chemistry.chemical_element ,01 natural sciences ,Atomic and Molecular Physics, and Optics ,Fluorescence spectroscopy ,0104 chemical sciences ,Analytical Chemistry ,Nickel ,chemistry ,Reagent ,0103 physical sciences ,Laser-induced breakdown spectroscopy ,Spectroscopy ,Instrumentation - Abstract
A novel method for the determination of Vanadium (V), Iron (Fe), and Nickel (Ni) in petroleum coke by laser-induced breakdown spectroscopy (LIBS) was proposed. Compared with the current common methods for determining elements in petroleum coke, which require a variety of reagents and a longer operation time, the LIBS method has the advantages of simple sample pre-treatment, faster measurement speed, less pollution of the measuring environment, and no reagents consumption. After feature selection of the wavelengths corresponding to V, Fe, and Ni in the LIBS spectrum of petroleum coke, the element contents of the test set were predicted after SVR modelling for the three elements in the training set. The results of root-mean-square error of predictions (RMSEP) for V, Fe and Ni were 36.4 mg/kg, 36.04 mg/kg and 14.94 mg/kg. The RMSEP of V and Ni were close to the reproducibility (accuracy) of element measurements (32 mg/kg and 14 mg/kg) using the wavelength dispersive X-ray fluorescence spectroscopy (WD-XFS) method in ASTM D6376–10 standard. This work demonstrated that this LIBS-based petroleum coke element quantitative analysis method, which was used for the first time, can be applied to the rapid detection of the petroleum coke industry.
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- 2021
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48. Fabrication of homogeneously Cu2+/La3+-doped CeO2nanosheets and their application in CO oxidation
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Zhiquan Shen, Weilin Sun, Jun Ling, and Xia Zhou
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chemistry.chemical_classification ,Materials science ,Fabrication ,Renewable Energy, Sustainability and the Environment ,Doping ,Inorganic chemistry ,chemistry.chemical_element ,02 engineering and technology ,General Chemistry ,Polymer ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Oxygen ,0104 chemical sciences ,Catalysis ,law.invention ,Active center ,chemistry ,Homogeneous ,law ,General Materials Science ,Calcination ,0210 nano-technology - Abstract
Nanosheets of coordination polymers (CPs) were synthesized via a facile and one-step complexing-coprecipitation (CC) method. Upon calcination, pure CeO2 and homogeneously La3+- or Cu2+-doped CeO2 products were fabricated by using CPs as precursors. The final products not only retained a stable nano-scale sheet-shaped morphology of their CP precursors, but also possessed high catalytic activity towards CO oxidation. Superior to commercial ceria with negligible catalytic activity, the synthesized CeO2 nanosheets exhibited high activity achieving a CO conversion of 60% at a temperature of 360 °C. When doped with Cu2+, remarkable improvement of catalysis is observed owing to the homogeneous incorporation of Cu2+ into the CeO2 lattice. As a catalytically active center, uniformly dispersed CuO also produces more oxygen vacancies and improves oxygen mobility, which results in an enhancement in catalytic activity. The detected temperatures with 50% CO conversion (T50) for Cu0.1Ce0.9O2−δ and Cu0.04Ce0.96O2−δ are 83 and 95 °C, respectively. In contrast, the catalytic test for La3+ doped ceria reveals a decreased activity compared with un-doped ceria. We believe that the Cu2+-doped CeO2 with superior catalytic performance can also be applied to other catalytic systems.
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- 2017
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49. Facile preparation of a novel nickel-containing metallopolymer via RAFT polymerization
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Yanhua Wang, Dizheng Liu, Weilin Sun, and Rong Ren
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Materials science ,Polymers and Plastics ,General Chemical Engineering ,Dispersity ,Metallopolymer ,chemistry.chemical_element ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Article ,Catalysis ,chemistry.chemical_compound ,Polymer chemistry ,Materials Chemistry ,Reversible addition−fragmentation chain-transfer polymerization ,chemistry.chemical_classification ,RAFT polymerization ,General Chemistry ,Raft ,Polymer ,Articles ,021001 nanoscience & nanotechnology ,Combinatorial chemistry ,0104 chemical sciences ,lcsh:TP1080-1185 ,Nickel ,Monomer ,chemistry ,lcsh:Polymers and polymer manufacture ,0210 nano-technology ,Metallocene - Abstract
While the metallocene polymers were comprehensively studied, other metallopolymers are rarely explored. The major challenge is the lack of a synthetic platform for the preparation of metal coordinated derivatives, monomers, and polymers. Therefore, the development of a facile synthesis of new metal coordinated monomers and polymers is critically needed. A novel successfully synthesized methacrylate-containing nickel complex is reported in this communication. Controlled RAFT polymerizations are further carried out to prepare a series of side-chain nickel containing polymers with different molecular weight and narrow Polydispersity Index (PDI). This new metallopolymer performs specific electrochemical and excellent thermal properties. This study provides a novel and convenient strategy to prepare metallopolymer with controllable molecular weight, which has potential applications in assembled, catalytic and magnetic materials.
- Published
- 2017
50. Comparison of full mitochondrial genomes for the rice weevil, Sitophilus oryzae and the maize weevil, Sitophilus zeamais (Coleoptera: Curculionidae)
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Brad S. Coates, Barry R. Pittendrigh, M. Carmen Valero, A. A. Omoloye, James Adebayo Ojo, and Weilin Sun
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0301 basic medicine ,biology ,Weevil ,Sitophilus ,biology.organism_classification ,Agricultural and Biological Sciences (miscellaneous) ,Dryophthorinae ,03 medical and health sciences ,030104 developmental biology ,Intergenic region ,Rice weevil ,Maize weevil ,Curculionidae ,Botany ,Genetics ,Cucujoidea ,Biotechnology - Abstract
Complete mitochondrial genome sequences were assembled for the rice weevil, Sitophilus oryzae (17,602 bp) and the maize weevil, S. zeamais (18,105 bp; Coleoptera: Curculionidae: Dryophthorinae), which encode 13 protein coding genes (PCGs), 22 transfer RNAs, and 2 ribosomal RNAs that is typical among Animalia. The A + T-rich control regions of S. oryzae (2818 bp) and S. zeamais (2832 bp) are the longest described to date among curculionoidea (weevils). Additionally, non-coding intergenic regions have increased in size due to expansion of tandem repeat arrays, but is more pronounced in S. zeamais (606 bp) compared to S. oryzae (109 bp). A total of 69 and 22 substitution mutations were found among reads from S. oryzae and S. zeamais, out of which 68 and 2 were predicted in the PCGs respectively, with a majority in NADH Dehydrogenase subunit I. Phylogenetic analyses of coleopteran insects based upon full mitogenomes PCG sequence supported the existence of Curculionoidea and Tenebrionoidea as a monophyletic group, whereas the Cucujoidea and Elateroidea remain paraphyletic. The mitogenomes of these two Sitophilus species provide insight into short-term evolutionary relationships among curculionid beetles, and provide resources for the potential deciphering of more broad systematic questions in the Order Coleoptera.
- Published
- 2016
- Full Text
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