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BackgroundDigital contact tracing apps have the potential to augment contact tracing systems and disrupt COVID-19 transmission by rapidly identifying secondary cases prior to the onset of infectiousness and linking them into a system of quarantine, testing, and health care worker case management. The international experience of digital contact tracing apps during the COVID-19 pandemic demonstrates how challenging their design and deployment are. ObjectiveThis study aims to derive and summarize best practice guidance for the design of the ideal digital contact tracing app. MethodsA collaborative cross-disciplinary approach was used to derive best practice guidance for designing the ideal digital contact tracing app. A search of the indexed and gray literature was conducted to identify articles describing or evaluating digital contact tracing apps. MEDLINE was searched using a combination of free-text terms and Medical Subject Headings search terms. Gray literature sources searched were the World Health Organization Institutional Repository for Information Sharing, the European Centre for Disease Prevention and Control publications library, and Google, including the websites of many health protection authorities. Articles that were acceptable for inclusion in this evidence synthesis were peer-reviewed publications, cohort studies, randomized trials, modeling studies, technical reports, white papers, and media reports related to digital contact tracing. ResultsEthical, user experience, privacy and data protection, technical, clinical and societal, and evaluation considerations were identified from the literature. The ideal digital contact tracing app should be voluntary and should be equitably available and accessible. User engagement could be enhanced by small financial incentives, enabling users to tailor aspects of the app to their particular needs and integrating digital contact tracing apps into the wider public health information campaign. Adherence to the principles of good data protection and privacy by design is important to convince target populations to download and use digital contact tracing apps. Bluetooth Low Energy is recommended for a digital contact tracing app's contact event detection, but combining it with ultrasound technology may improve a digital contact tracing app's accuracy. A decentralized privacy-preserving protocol should be followed to enable digital contact tracing app users to exchange and record temporary contact numbers during contact events. The ideal digital contact tracing app should define and risk-stratify contact events according to proximity, duration of contact, and the infectiousness of the case at the time of contact. Evaluating digital contact tracing apps requires data to quantify app downloads, use among COVID-19 cases, successful contact alert generation, contact alert receivers, contact alert receivers that adhere to quarantine and testing recommendations, and the number of contact alert receivers who subsequently are tested positive for COVID-19. The outcomes of digital contact tracing apps' evaluations should be openly reported to allow for the wider public to review the evaluation of the app. ConclusionsIn conclusion, key considerations and best practice guidance for the design of the ideal digital contact tracing app were derived from the literature.

Prenatal stress (PNS) and early life adversity have been linked to epigenetic changes in the nervous, immune, and endocrine systems in various species. Previously, we reported that PNS calves had greater serum concentrations of ACTH and cortisol, were more temperamental, and had differential methylation of leukocyte DNA. The purpose of this study was to determine whether prenatal transportation stress differentially affected gene expression in the adrenal gland of calves. Mature Brahman cows inseminated to a single Brahman sire were assigned to either Control (n = 35; not transported) or PNS (n = 37; 2 h of transportation at 60, 80, 100, 120, and 140 ± 5 d of gestation) group. From some of these cows, 8 Control and 8 PNS bull calves were humanely euthanized at 25 ± 2 d of age. Adrenal glands were obtained, separated into the cortical (AC) and medullary (AM) components, placed into cryovials, snap frozen in liquid nitrogen, and stored at -80°C. Frozen samples (200 mg) were submitted to Novogene Corporation for RNA sequencing analysis on an Illumina Novaseq 6000 platform to generate 150 bp paired-end reads. The reference genome was Bos taurus ARS-UCD1.2. The DESeq2 R package was used for differential gene expression analysis (DEG) and DEGs (P ≤ 0.05, log2FC ≥ 1) were evaluated for gene ontology (GO) subclass terms and Kyoto encyclopedia of genes and genomes (KEGG) enrichment pathways. For the AC DEG comparison, a total of 899 genes were identified, with 641 upregulated and 258 downregulated in PNS calves. The AC DEGs were in the cellular component, molecular function and biological process GO subclasses related to circadian rhythm, lymphocyte proliferation, cytokine regulation, muscle development, and lipid metabolism. The KEGG enrichment analysis identified nitrogen metabolism, cytokine signaling, and circadian rhythm pathways associated with DEG of the AC. For the AM DEG comparison, a total of 1,245 genes were identified, with 745 upregulated and 500 downregulated in the PNS calves. The AM DEGs were in GO subclasses related to skeletal muscle development, antigen processing, and neural crest development. The KEGG enrichment analysis identified cell adhesion, viral infection, cytokine signaling, and amphetamine pathways associated with DEG of the AM. These early results suggest that prenatal stress differentially affects expression of genes of the adrenal cortex and adrenal medulla, which may affect health and growth of calves. [ABSTRACT FROM AUTHOR]

The non-nitrogenous bisphosphonate clodronate disodium (CD) inhibits bone resorption and is approved for horses ≥ 4 yr of age. Extra-label use in juvenile exercising horses is a concern due to potential interference with normal bone growth and development. The objective was to determine the effects of single and repeated doses of CD on bone optical density (radiographic bone aluminum equivalence; RBAE) and lameness score (LS) in juvenile, exercising horses. Quarter Horses [n = 32 (16 geldings, 16 fillies); 500 ± 13 d of age; body weight (BW) = 336 ± 26 kg]) were used to test the hypothesis that horses receiving CD would have greater RBAE and reduced LS, and additional doses of CD would accentuate these effects. In a 168-d trial, horses were housed in individual stalls, and fed 1% BW/d concentrate and ad libitum Coastal bermudagrass hay. Horses were exercised 5 d/wk following a phase-based progressive workload using a free stall exerciser; Phase I (d 0 to 84) mimicked sales preparation whereas Phase II (d 85 to 168) simulated early training. Horses were stratified by age, BW, sex, and initial RBAE into control (CON; n = 8), single dose CD (1X; d 84; n = 8), 2-doses CD (2X; d 0 and d 84; n = 8), and four-doses CD (4X; d 0, d 42, d 84, d 126; n = 8). On injection d (0, 42, 84, and 126), horses were administered either 1.8 mg/kg BW CD (OSPHOS) or isovolumetric saline. On d 0, 84, and 168, dorsalpalmar and lateral-medial radiographs of the left third metacarpus and metatarsus were captured. An aluminum step wedge was included in each image and raw images were analyzed (Quantity One Basic, BioRad) to determine total bone RBAE at 1 cm distal to the nutrient foramen. On d 0 and d 168, horses were evaluated by a veterinarian unaware of treatment group and assigned a LS according to the American Association of Equine Practitioners Lameness Scale. The RBAE and LS data were analyzed via PROC MIXED and PROC GENMOD, respectively, in SAS. For each view, RBAE increased from d 0 to d 84 and remained increased to d 168 (P ≤ 0.02), regardless of treatment, likely due to progressing exercise protocol. On d 0, 29 horses were LS 0, 1 horse was LS 1, and 2 horses were LS 2; LS did not differ among treatment groups (P = 0.61). On d 168, 5 horses were LS 0, 13 horses were LS 2, 11 horses were LS 3, and 1 horse was LS 4; LS did not differ among treatments (P = 0.16). Based on these results, the hypothesis that single or repeated CD administration would increase RBAE and decrease lameness in juvenile, exercised Quarter Horses was rejected. [ABSTRACT FROM AUTHOR]

Beef cattle breed and temperament are known to impact beef production; however, the physiological pathways linking stress and growth to palatability are not well understood. To test the hypothesis that live animal circulatory cortisol and insulin-like growth factor 1 (IGF1) would be related to temperament, production efficiency, and palatability, Brahman and Angus steers were classified as calm (n = 13 Angus; n = 12 Brahman), intermediate (n = 11 Angus; n = 10 Brahman), or temperamental (n = 12 Angus; n = 12 Brahman) based on their pen score and exit velocity at weaning. Serum samples collected at 10, 13, and 18 mo of age were evaluated for cortisol and IGF1 concentrations. Steers were maintained on grass pasture until they were moved to a feedlot after the 13-mo collection and provided a growing ration. Following the 18-mo collection, steers were sent to a commercial abattoir. Data were analyzed using linear models in SASv9.4 with breed, age, temperament, and all interactions as fixed effects and age as a repeated effect with animal(breed) as the subject. Relationships between variables were assessed with Pearson correlation coefficients. Calm Angus had greater IGF1 than temperamental Angus (P = 0.02) while intermediate Brahman had greater IGF1 than calm or temperamental Brahman (P ≤ 0.02). Temperamental Brahman had greater cortisol concentrations than calm and intermediate Brahman and temperamental Angus (P ≤ 0.01). In Angus, IGF1 concentrations decreased from 10 to 13 mo and from 13 to 18 mo (P ≤ 0.0006). In contrast, Brahman IGF1 concentrations increased with age to be greater at 13 and 18 mo than 10 mo (P ≤ 0.0001). Angus also had greater serum IGF1 than Brahman at 10 mo, but Brahman had greater IGF1 than Angus at 13 and 18 mo (P ≤ 0.0007). In 10 mo Brahman, IGF1 was positively correlated with animal body weight (BW) and average daily gain (P ≤ 0.005). IGF1 in 10 and 13 mo Brahman was also positively correlated with marbling (P ≤ 0.03). IGF1 in 13 mo Angus was positively correlated with WarnerBratzler shear force (P = 0.02). Cortisol concentrations in Angus were greater at 10 and 13 mo than at 18 mo (P ≤ 0.004) leading to 10 mo Angus having greater cortisol concentrations than Brahman of the same age (P = 0.05). In Angus, at 10, 13, and 18 mo, cortisol was positively correlated with animal BW and hot carcass weight (P ≤ 0.05). At 10 and 13 mo, cortisol was positively correlated with ribeye area in Angus (P ≤ 0.005). These data suggest that serum IGF1 in Brahman is related to growth and lipid metabolism, and tenderness in Angus. However, cortisol concentrations have a more prevalent relationship with Angus growth and subsequently beef production. This project was supported by USDA NIFA Award #2021-67015-33392. [ABSTRACT FROM AUTHOR]

The objective of this study was to determine if sire or dam had a stronger impact on age at first parturition of Brahman heifers (n = 833) born between 2000- 2021. Typically, in Bos taurus heifers, puberty occurs between 10 to 12 mo of age leading to parturition of the first calf occurring around 24 mo of age. However, in Bos indicus cattle, puberty is achieved between 15 to 17 mo of age leading to a first calf around 36 mo of age. The ability of heifers to achieve pubertal status earlier plays a vital role in reproductive success. For selection purposes, knowing if early pubertal attainment is influenced more by the sire or dam is important for herd management. For this study, to minimize any epigenetic and environmental changes, all heifers originated and were developed at the Texas A&M AgriLife Research Center at Overton. Sire groups (SG) and dam groups (DG) were established based on the number of offspring used in the study. Sire groups were comprised of SG-1 (1+ calves sired; n = 58 sires), SG-2 (5+ calves sired; n = 44 sires), SG-3 (10+ calves sired; n = 31 sires), SG-4 (15+ calves sired; n = 23 sires), SG-5 (20+ calves sired; n = 17 sires), and SG-6 (25+ calves sired; n = 12 sires). Dam groups consisted of DG-1 (1+ calves; n = 489 dams), DG-2 (2+ calves; n = 215 dams), DG-3 (3+ calves; n = 81 dams), DG-4 (4+ calves; n = 38 dams), and DG-5 (5+ calves; n = 9 dams). Statistical analysis (PROC GLM; SAS 9.4) included the fixed effect of sire group (dam group) and all dams (sires) utilized in that grouping. Significance for age at first calving was considered at P < 0.05. Mean separation for age was performed using LSmeans. Sire significantly impacted age at first calving in SG-1 (P = 0.0173) vs dam effect (P = 0.3993; n = 489 dams), SG-2 (P = 0.0159) vs dam effect (P = 0.5476; n = 481 dams), SG-3 (P = 0.0023) vs dam effect (P = 0.2532; n = 439 dams), SG-4 (P = 0.0022) vs dam effect (P = 0.3997; n = 400 dams), SG-5 (P = 0.0002) vs dam effect (P = 0.0602; n = 361 dams), and SG-6 (P = 0.0005) vs dam effect (P = 0.1058; n = 305 dams). The dam impact on age at first calving was never significant in the dam groupings but sires did impact age at first calving in two groups: DG-1 (P = 0.3993) vs sire effect (P = 0.0173; n = 58 sires), DG-2 (P = 0.4823) vs sire effect (P = 0.0173; n = 56 sires), DG-3 (P = 0.3011) vs sire effect (P = 0.3420; n = 49 sires), DG-4 (P = 0.3911) vs sire effect (P = 0.6278; n = 40 sires), and DG-5 (P = 0.3042) vs sire effect (P = 0.9159; n = 23 sires). In summary, evaluation of sire and dam influences on age at first parturition for female offspring demonstrates that the ability to calve at an earlier age is influenced by the sire but not the dam. Further studies into the mechanisms for the transmission of this trait are warranted. [ABSTRACT FROM AUTHOR]

Bovine respiratory disease (BRD) contributes to high rates of mortality and morbidity among feedlot animals. Thus, there is a need to discover robust predictive biological indicators of infection status and disease severity in feedlot cattle. This study aimed to explore the use of 1 H nuclear magnetic resonance (NMR) based metabolite profiling to characterize serum molecular markers associated with a viralbacterial respiratory disease challenge in beef cattle. Crossbred beef steers [n = 24; initial body weight (BW) = 293 kg) were inoculated intranasally with bovine herpes virus-1 (2×108 PFU) and intratracheally with Mannheimia haemolytica (MH, 2.15×1010 CFU) on d -3 and 0, respectively (n = 16; MH-challenge), or similarly inoculated with phosphate-buffered saline (n = 8; Control-challenge). Blood was collected via jugular venipuncture on d -3, -1, 0, 2, 3, 5, 7, 10, and 14 relative to MH challenge for complete blood count and haptoglobin analysis, with additional serum samples stored at -80°C for subsequent metabolomic analysis. Continuously recorded variables included rumen temperature, activity, rumination, dry matter intake, and feeding behavior. Wottlin et al. (2020) reported that rumen temperature was increased (P < 0.04) in MH-challenged steers until d 6 post-MH inoculation (40.8 vs 39.3°C in MH-challenged and Controlchallenged steers several hours post-MH inoculation). Dry matter intake was reduced (P < 0.01) by 42% in MH-challenged compared with Control-challenged steers during the 14-d post-MH inoculation period. Further, haptoglobin concentrations were increased (P < 0.05) in MH-challenged steers from d 2 to 7 of the post-MH inoculation period. Serum samples underwent small molecule metabolite extraction and untargeted ¹ H NMR metabolomics. The ¹ H NMR spectra of serum metabolites were evaluated for this study, resulting in the unambiguous identification and quantification of 64 polar metabolites. Univariate analysis was conducted to examine the effect of the MH challenge on relative metabolite concentrations between d 2 and 5 relative to MH challenge, indicating differences between metabolites of MH-challenge and Control-challenged steers. However, multivariate analysis using unsupervised 2-dimensional principal component analysis (2D-PCA) could not differentiate MH-challenged from Control-challenged steers based on distinct serum metabolite profiles. Results indicate the potential of specific metabolites to indicate BRD infected cattle; however, a larger cohort of cattle and expanded metabolite profile coverage may be required to more fully differentiate between BRD vs healthy cohorts. Opportunities exist to further investigate the role of metabolomics to discover robust early biological indicators that are predictive of the onset of BRD in feedlot cattle. [ABSTRACT FROM AUTHOR]