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A 16-member convective-scale ensemble prediction system (CEPS) developed at the Central Weather Bureau (CWB) of Taiwan is evaluated for probability forecasts of convective precipitation. To address the issues of limited predictability of convective systems, the CEPS provides short-range forecasts using initial conditions from a rapid-updated ensemble data assimilation system. This study aims to identify the behavior of the CEPS forecasts, especially the impact of different ensemble configurations and forecast lead times. Warm-season afternoon thunderstorms (ATs) from 30 June to 4 July 2017 are selected. Since ATs usually occur between 1300 and 2000 LST, this study compares deterministic and probabilistic quantitative precipitation forecasts (QPFs) launched at 0500, 0800, and 1100 LST. This study demonstrates that initial and boundary perturbations (IBP) are crucial to ensure good spread–skill consistency over the 18-h forecasts. On top of IBP, additional model perturbations have insignificant impacts on upper-air and precipitation forecasts. The deterministic QPFs launched at 1100 LST outperform those launched at 0500 and 0800 LST, likely because the most-recent data assimilation analyses enhance the practical predictability. However, it cannot improve the probabilistic QPFs launched at 1100 LST due to inadequate ensemble spreads resulting from limited error growth time. This study points out the importance of sufficient initial condition uncertainty on short-range probabilistic forecasts to exploit the benefits of rapid-update data assimilation analyses. Significance Statement This study aims to understand the behavior of convective-scale short-range probabilistic forecasts in Taiwan and the surrounding area. Taiwan is influenced by diverse weather systems, including typhoons, mei-yu fronts, and local thunderstorms. During the past decade, there has been promising improvement in predicting mesoscale weather systems (e.g., typhoons and mei-yu fronts). However, it is still challenging to provide timely and accurate forecasts for rapid-evolving high-impact convection. This study provides a reference for the designation of convective-scale ensemble prediction systems; in particular, those with a goal to provide short-range probabilistic forecasts. While the findings cannot be extrapolated to all ensemble prediction systems, this study demonstrates that initial and boundary perturbations are the most important factors, while the model perturbation has an insignificant effect. This study suggests that in-depth studies are required to improve the convective-scale initial condition accuracy and uncertainty to provide reliable probabilistic forecasts within short lead times.