207 results on '"Yifan, Zhan"'
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2. An antibody cocktail targeting two different CD73 epitopes enhances enzyme inhibition and tumor control
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Jin-Gen Xu, Shi Chen, Yang He, Xi Zhu, Yanting Wang, Zhifeng Ye, Jin Chuan Zhou, Xuanhui Wu, Lei Zhang, Xiaochen Ren, Huifeng Jia, Haijia Yu, Xiaoyue Wei, Yujie Feng, Xiaofang Chen, Xiaopei Cui, Xianfei Pan, Shaojie Wang, Simin Xia, Hongjie Shang, Yueqing Pu, Wei Xu, Haidong Li, Qian Chen, Zeyu Chen, Manfu Wang, Xiaodong Yan, Hui Shi, Mingwei Li, Yisui Xia, Roberto Bellelli, Shunli Dong, Jun He, Jun Huang, Chen-Leng Cai, Xiangyang Zhu, Yifan Zhan, and Li Wan
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Science - Abstract
Abstract CD73, an ectoenzyme responsible for adenosine production, is often elevated in immuno-suppressive tumor environments. Inhibition of CD73 activity holds great promise as a therapeutic strategy for CD73-expressing cancers. In this study, we have developed a therapeutic anti-human CD73 antibody cocktail, HB0045. HB0045 is a 1:1 mixture of two humanized monoclonal IgG1 antibodies (mAbs), HB0038 and HB0039. The cocktail not only harnesses the advantages of its parental mAbs in enzyme inhibition but also shows a significantly greater capability of promoting T cell proliferation in vitro. Structural analyses show that HB0045 effectively locks the CD73 dimer in a “partially open” non-active conformation through a double lock mechanism. In various animal models of syngeneic and xenograft tumors, HB0045 inhibits tumor growth more potently than the single mAbs. Collectively, our findings provide functional and structural insights into the mechanism of a CD73-targeting antibody cocktail.
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- 2024
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3. RPBG: Towards Robust Neural Point-Based Graphics in the Wild.
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Qingtian Zhu, Zizhuang Wei, Zhongtian Zheng, Yifan Zhan, Zhuyu Yao, Jiawang Zhang, Kejian Wu, and Yinqiang Zheng
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- 2024
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4. KFD-NeRF: Rethinking Dynamic NeRF with Kalman Filter.
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Yifan Zhan, Zhuoxiao Li, Muyao Niu, Zhihang Zhong, Shohei Nobuhara, Ko Nishino, and Yinqiang Zheng
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- 2024
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5. Within the Dynamic Context: Inertia-Aware 3D Human Modeling with Pose Sequence.
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Yutong Chen, Yifan Zhan, Zhihang Zhong, Wei Wang 0333, Xiao Sun 0001, Yu Qiao 0001, and Yinqiang Zheng
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- 2024
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6. RS-NeRF: Neural Radiance Fields from Rolling Shutter Images.
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Muyao Niu, Tong Chen, Yifan Zhan, Zhuoxiao Li, Xiang Ji, and Yinqiang Zheng
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- 2024
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7. Dual blockade of IL-17A and IL-36 pathways via a bispecific antibody exhibits enhanced anti-inflammatory potency
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Xiaojuan Ma, Shuang Zhang, Xiaochen Ren, Yujie Feng, Hui Li, Shi Chen, Jingen Xu, Yanting Wang, Guo-yuan Peng, Qingran Yan, Huifeng Jia, Simin Xia, Xiaopei Cui, Xiaofang Chen, Xianfei Pan, Shaojie Wang, Haijia Yu, Xiaoyue Wei, Mingwei Li, Bei Liu, Jingyue Xu, Qiaoxia Qian, Xiangyang Zhu, Yifan Zhan, and Liangjing Lu
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bispecific antibody ,IL-17A ,IL-36R ,skin inflammation ,skin fibrosis ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Antibody drugs targeting single inflammatory cytokines have revolutionized the treatment of immune-mediated inflammatory diseases. To investigate whether dual targeting interleukin-17 (IL-17) and IL-36 enhances anti-inflammatory activity, bispecific Ab HB0043 was generated by linking the single chain fragment variables (scFvs) from humanized anti-IL-36R antibody (HB0034) to the C-terminus of the heavy chain of anti-IL-17A IgG1 (HB0017) Fc using a flexible peptide linker. HB0043 largely maintained the binding affinities and biological activities of the two parent monoclonal antibodies (mAbs) in vitro. IL-17 and IL-36 cooperated to amplify the expression of pro-inflammatory and pro-fibrotic genes in normal human dermal fibroblasts (NHDF). However, HB0043 more effectively blocked IL-6 and IL-8 production in NHDF stimulated by IL-17A and IL-36 compared to two monoclonal antibodies. In a mouse model of Oxazolone (OXA)-induced atopic dermatitis and Imiquimod (IMQ)-induced skin inflammation, administration of both anti-IL17A mAb HB0017 and anti-mouse IL-36R surrogate antibody HB0034SA showed improved effectiveness in alleviating skin thickening and inflammation based on histological assessment. Further, in cynomolgus monkeys, HB0043 showed no enhanced target-related toxicity compared with the two parental mAbs in vivo and with a moderate increase in production of anti-drug antibodies. Together, dual blockade of IL-17A and IL-36R in the form of a bispecific antibody may have advantages in blocking the overlapping and non-overlapping functions of these two cytokines in skin inflammation that could not optimally be curtailed with single mAbs. In conclusion, as monotherapy may reach therapeutic celling for certain difficult-to-treat inflammatory and fibrotic diseases, dual targeting could potentially pave a way to combat these diseases.
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- 2024
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8. Inhibition of P21-activated kinases 1 and 4 synergistically suppresses the growth of pancreatic cancer by stimulating anti-tumour immunity
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Yi Ma, Chelsea Dumesny, Li Dong, Ching-Seng Ang, Khashayar Asadi, Yifan Zhan, Mehrdad Nikfarjam, and Hong He
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P21-activated kinases1&4 ,Intra-tumoral T cells ,Pancreatic ductal adenocarcinoma ,Medicine ,Cytology ,QH573-671 - Abstract
Abstract Background Pancreatic ductal adenocarcinoma (PDA) is one of the most lethal types of cancer, and KRAS oncogene occurs in over 90% of cases. P21-activated kinases (PAK), containing six members (PAK1 to 6), function downstream of KRAS. PAK1 and PAK4 play important roles in carcinogenesis, but their combinational effect remains unknown. In this study, we have determined the effect of dual inhibition of PAK1 and PAK4 in PDA progression using knockout (KO) cancer cell lines. Methods Murine wild-type (WT) and PAK1KO pancreatic cancer cell lines were isolated from PAK1+/+ and PAK1−/− KPC (LSL-Kras G12D/+ ; LSL-Trp53 R172H/+ ; Pdx-1-Cre) mice. KPC PAK4KO and KPC PAK1&4 KO cell lines were generated from KPC WT and KPC PAK1KO cell lines respectively using the CRISPR-CAS9 gene knockout technique. PAK WT and KO cell lines were used in mouse models of pancreatic tumours. Cells and tumour tissue were also used in flow cytometry and proteomic studies. A human PDA tissue microarray was stained by immunohistochemistry. Results Double knock out of PAK1 and PAK4 caused complete regression of tumour in a syngeneic mouse model. PAK4KO inhibited tumour growth by stimulating a rapid increase of cytotoxic CD8+ T cell infiltration. PAK1KO synergistically with PAK4KO increased cytotoxic CD8+ T cell infiltration and stimulated a sustained infiltration of CD8+ T cells at a later phase to overcome the immune evasion in the PAK4KO tumour. The human PDA tissue microarray study showed the important role of PAK1 and PAK4 in intra-tumoral T-cell function. Conclusion Our results demonstrated that dual inhibition of PAK1 and PAK4 synergistically suppressed PDA progression by stimulating cytotoxic CD8 + T cell response.
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- 2024
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9. NeRFrac: Neural Radiance Fields through Refractive Surface.
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Yifan Zhan, Shohei Nobuhara, Ko Nishino, and Yinqiang Zheng
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- 2023
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10. TransVAT: Transformer Encoder with Variational Attention for Few-Shot Fault Diagnosis.
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Yifan Zhan and Rui Yang
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- 2023
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11. Physics-Based Adversarial Attack on Near-Infrared Human Detector for Nighttime Surveillance Camera Systems.
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Muyao Niu, Zhuoxiao Li, Yifan Zhan, Huy H. Nguyen, Isao Echizen, and Yinqiang Zheng
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- 2023
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12. GAST: Sequential Gaussian Avatars with Hierarchical Spatio-temporal Context.
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Wangze Xu, Yifan Zhan, Zhihang Zhong, and Xiao Sun
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- 2024
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13. MaskGaussian: Adaptive 3D Gaussian Representation from Probabilistic Masks.
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Yifei Liu, Zhihang Zhong, Yifan Zhan, Sheng Xu, and Xiao Sun
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- 2024
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14. Bundle Adjusted Gaussian Avatars Deblurring.
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Muyao Niu, Yifan Zhan, Qingtian Zhu, Zhuoxiao Li, Wei Wang 0333, Zhihang Zhong, Xiao Sun 0001, and Yinqiang Zheng
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- 2024
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15. SUICA: Learning Super-high Dimensional Sparse Implicit Neural Representations for Spatial Transcriptomics.
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Qingtian Zhu, Yumin Zheng, Yuling Sang, Yifan Zhan, Ziyan Zhu, Jun Ding, and Yinqiang Zheng
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- 2024
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16. Physics-Based Adversarial Attack on Near-Infrared Human Detector for Nighttime Surveillance Camera Systems.
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Muyao Niu, Zhuoxiao Li, Yifan Zhan, Huy H. Nguyen, Isao Echizen, and Yinqiang Zheng
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- 2024
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17. ToMiE: Towards Modular Growth in Enhanced SMPL Skeleton for 3D Human with Animatable Garments.
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Yifan Zhan, Qingtian Zhu, Muyao Niu, Mingze Ma, Jiancheng Zhao, Zhihang Zhong, Xiao Sun 0001, Yu Qiao 0001, and Yinqiang Zheng
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- 2024
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18. Iguratimod attenuated fibrosis in systemic sclerosis via targeting early growth response 1 expression
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Lichong Shen, Hanlin Yin, Li Sun, Zhiliang Zhang, Yuyang Jin, Shan Cao, Qiong Fu, Chaofan Fan, Chunde Bao, Liangjing Lu, Yifan Zhan, Xiaojiang Xu, Xiaoxiang Chen, and Qingran Yan
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Early growth response 1 ,Systemic sclerosis ,Iguratimod ,Anti-fibrotic ,Xenograft ,Diseases of the musculoskeletal system ,RC925-935 - Abstract
Abstract Background The early growth response 1 (EGR1) is a central transcription factor involved in systemic sclerosis (SSc) pathogenesis. Iguratimod is a synthesized anti-rheumatic disease-modifying drug, which shows drastic inhibition to EGR1 expression in B cells. This study is aiming to investigate the anti-fibrotic effect of iguratimod in SSc. Methods EGR1 was detected by immunofluorescence staining real-time PCR or western blot. Iguratimod was applied in EGR1 overexpressed or knockdown human dermal fibroblast, bleomycin pre-treated mice, tight skin 1 mice, and SSc skin xenografts. RNA sequencing was performed in cultured fibroblast and xenografts to identify the iguratimod regulated genes. Results EGR1 overexpressed predominantly in non-immune cells of SSc patients. Iguratimod reduced EGR1 expression in fibroblasts and neutralized changes of EGR1 response genes regulated by TGFβ. The extracellular matrix (ECM) production and activation of fibroblasts were attenuated by iguratimod while EGR1 overexpression reversed this effect of iguratimod. Iguratimod ameliorated the skin fibrosis induced by bleomycin and hypodermal fibrosis in TSK-1 mice. Decreasing in the collagen content as well as the density of EGR1 or TGFβ positive fibroblasts of skin xenografts from naïve SSc patients was observed after local treatment of iguratimod. Conclusion Targeting EGR1 expression is a probable underlying mechanism for the anti-fibrotic effect of iguratimod.
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- 2023
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19. Systemic inflammatory response syndrome triggered by blood-borne pathogens induces prolonged dendritic cell paralysis and immunosuppression
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Mitra Ashayeripanah, Javier Vega-Ramos, Daniel Fernandez-Ruiz, Shirin Valikhani, Aaron T.L. Lun, Jason T. White, Louise J. Young, Atefeh Yaftiyan, Yifan Zhan, Linda Wakim, Irina Caminschi, Mireille H. Lahoud, Andrew M. Lew, Ken Shortman, Gordon K. Smyth, William R. Heath, Justine D. Mintern, Antoine Roquilly, and Jose A. Villadangos
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CP: Immunology ,Biology (General) ,QH301-705.5 - Abstract
Summary: Blood-borne pathogens can cause systemic inflammatory response syndrome (SIRS) followed by protracted, potentially lethal immunosuppression. The mechanisms responsible for impaired immunity post-SIRS remain unclear. We show that SIRS triggered by pathogen mimics or malaria infection leads to functional paralysis of conventional dendritic cells (cDCs). Paralysis affects several generations of cDCs and impairs immunity for 3–4 weeks. Paralyzed cDCs display distinct transcriptomic and phenotypic signatures and show impaired capacity to capture and present antigens in vivo. They also display altered cytokine production patterns upon stimulation. The paralysis program is not initiated in the bone marrow but during final cDC differentiation in peripheral tissues under the influence of local secondary signals that persist after resolution of SIRS. Vaccination with monoclonal antibodies that target cDC receptors or blockade of transforming growth factor β partially overcomes paralysis and immunosuppression. This work provides insights into the mechanisms of paralysis and describes strategies to restore immunocompetence post-SIRS.
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- 2024
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20. Identification and Characterization of CD8+CD27+CXCR3− T Cell Dysregulation and Progression‐Associated Biomarkers in Systemic Lupus Erythematosus
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Lulu Zhang, Fang Du, Qiqi Jin, Li Sun, Boqian Wang, Ziyang Tan, Xinyu Meng, Baozhen Huang, Yifan Zhan, Wenqiong Su, Rui Song, Chunmei Wu, Luonan Chen, Xiaoxiang Chen, and Xianting Ding
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dynamic network biomarker ,mass cytometry ,single‐cell RNA sequencing ,systemic lupus erythematosus ,Science - Abstract
Abstract Systemic Lupus Erythematosus (SLE) etiopathogenesis highlights the contributions of overproduction of CD4+ T cells and loss of immune tolerance. However, the involvement of CD8+ T cells in SLE pathology and disease progression remains unclear. Here, the comprehensive immune cell dysregulation in total 263 clinical peripheral blood samples composed of active SLE (aSLE), remission SLE (rSLE) and healthy controls (HCs) is investigated via mass cytometry, flow cytometry and single‐cell RNA sequencing. This is observed that CD8+CD27+CXCR3− T cells are increased in rSLE compare to aSLE. Meanwhile, the effector function of CD8+CD27+CXCR3− T cells are overactive in aSLE compare to HCs and rSLE, and are positively associated with clinical SLE activity. In addition, the response of peripheral blood mononuclear cells (PBMCs) is monitored to interleukin‐2 stimulation in aSLE and rSLE to construct dynamic network biomarker (DNB) model. It is demonstrated that DNB score‐related parameters can faithfully predict the remission of aSLE and the flares of rSLE. The abundance and functional dysregulation of CD8+CD27+CXCR3− T cells can be potential biomarkers for SLE prognosis and concomitant diagnosis. The DNB score with accurate prediction to SLE disease progression can provide clinical treatment suggestions especially for drug dosage determination.
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- 2023
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21. RIPK3 controls MAIT cell accumulation during development but not during infection
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Timothy Patton, Zhe Zhao, Xin Yi Lim, Eleanor Eddy, Huimeng Wang, Adam G. Nelson, Bronte Ennis, Sidonia B. G. Eckle, Michael N. T. Souter, Troi J. Pediongco, Hui-Fern Koay, Jian-Guo Zhang, Tirta M. Djajawi, Cynthia Louis, Najoua Lalaoui, Nicolas Jacquelot, Andrew M. Lew, Daniel G. Pellicci, James McCluskey, Yifan Zhan, Zhenjun Chen, Kate E. Lawlor, and Alexandra J. Corbett
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Cytology ,QH573-671 - Abstract
Abstract Cell death mechanisms in T lymphocytes vary according to their developmental stage, cell subset and activation status. The cell death control mechanisms of mucosal-associated invariant T (MAIT) cells, a specialized T cell population, are largely unknown. Here we report that MAIT cells express key necroptotic machinery; receptor-interacting protein kinase 3 (RIPK3) and mixed lineage kinase domain-like (MLKL) protein, in abundance. Despite this, we discovered that the loss of RIPK3, but not necroptotic effector MLKL or apoptotic caspase-8, specifically increased MAIT cell abundance at steady-state in the thymus, spleen, liver and lungs, in a cell-intrinsic manner. In contrast, over the course of infection with Francisella tularensis, RIPK3 deficiency did not impact the magnitude of the expansion nor contraction of MAIT cell pools. These findings suggest that, distinct from conventional T cells, the accumulation of MAIT cells is restrained by RIPK3 signalling, likely prior to thymic egress, in a manner independent of canonical apoptotic and necroptotic cell death pathways.
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- 2023
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22. Noiseless single-photon isolator at room temperature
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Shicheng Zhang, Yifan Zhan, Shangqing Gong, and Yueping Niu
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Astrophysics ,QB460-466 ,Physics ,QC1-999 - Abstract
Abstract Nonreciprocal devices, such as isolators, are of great importance for optical communication and optical information processing. To bypass the limitation of a strong magnetic field imposed by the traditional Faraday magneto-optic effect, many alternative mechanisms have been proposed to demonstrate magnetic-free nonreciprocity. However, limited by the drive-induced noise, the noiseless isolator capable of working in the quantum regime has yet to be realized in the experiment. Here, we show a noiseless all-optical isolator with genuine single photons in hot atoms. We experimentally study this mechanism using an open V-type level scheme and demonstrate a low insertion loss of 0.6 dB and high isolation of 30.3 dB with bandwidth up to hundreds of megahertz. Furthermore, the nonreciprocal direction can be truly reversed only by tuning the frequency of the pump laser with the same setup. Our scheme relies on widely used optical technology and is thus universal and robust.
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- 2023
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23. Correction: Iguratimod attenuated fbrosis in systemic sclerosis via targeting early growth response 1 expression
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Lichong Shen, Hanlin Yin, Li Sun, Zhiliang Zhang, Yuyang Jin, Shan Cao, Qiong Fu, Chaofan Fan, Chunde Bao, Liangjing Lu, Yifan Zhan, Xiaojiang Xu, Xiaoxiang Chen, and Qingran Yan
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Diseases of the musculoskeletal system ,RC925-935 - Published
- 2024
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24. Author Correction: Noiseless single-photon isolator at room temperature
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Shicheng Zhang, Yifan Zhan, Shangqing Gong, and Yueping Niu
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Astrophysics ,QB460-466 ,Physics ,QC1-999 - Published
- 2023
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25. Distinct Metabolism of Bone Marrow Adipocytes and their Role in Bone Metastasis
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Yixuan Li, Shan Cao, Anastasia Gaculenko, Yifan Zhan, Aline Bozec, and Xiaoxiang Chen
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bone marrow adipocytes ,lineage-tracing ,metabolism ,bone metastasis ,multi-omic analysis ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
Bone marrow adipocytes (BMAs) represent 10% of the total fat mass of the human body and serve as an energy reservoir for the skeletal niche. They function as an endocrine organ by actively secreting fatty acids, cytokines, and adipokines. The volume of BMAs increases along with age, osteoporosis and/or obesity. With the rapid development of multi-omic analysis and the advance in in vivo imaging technology, further distinct characteristics and functions of BMAs have been revealed. There is accumulating evidence that BMAs are metabolically, biologically and functionally unique from white, brown, beige and pink adipocytes. Bone metastatic disease is an uncurable complication in cancer patients, where primary cancer cells spread from their original site into the bone marrow. Recent publications have highlighted those BMAs could also serve as a rich lipid source of fatty acids that can be utilized by the cancer cells during bone metastasis, particularly for breast, prostate, lung, ovarian and pancreatic cancer as well as melanoma. In this review, we summarize the novel progressions in BMAs metabolism, especially with multi-omic analysis and in vivo imaging technology. We also update the metabolic role of BMAs in bone metastasis, and their potential new avenues for diagnosis and therapies against metastatic cancers.
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- 2022
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26. Discordance in STING-Induced Activation and Cell Death Between Mouse and Human Dendritic Cell Populations
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Ee Shan Pang, Ghazal Daraj, Katherine R. Balka, Dominic De Nardo, Christophe Macri, Hubertus Hochrein, Kelly-Anne Masterman, Peck S. Tan, Angus Shoppee, Zoe Magill, Nazneen Jahan, Mariam Bafit, Yifan Zhan, Benjamin T. Kile, Kate E. Lawlor, Kristen J. Radford, Mark D. Wright, and Meredith O’Keeffe
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STING activation ,dendritic cell (DC) ,interferon-lambda ,human dendritic cells ,type III interferons ,cell death ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Stimulator of Interferon Genes (STING) is a cytosolic sensor of cyclic dinucleotides (CDNs). The activation of dendritic cells (DC) via the STING pathway, and their subsequent production of type I interferon (IFN) is considered central to eradicating tumours in mouse models. However, this contribution of STING in preclinical murine studies has not translated into positive outcomes of STING agonists in phase I & II clinical trials. We therefore questioned whether a difference in human DC responses could be critical to the lack of STING agonist efficacy in human settings. This study sought to directly compare mouse and human plasmacytoid DCs and conventional DC subset responses upon STING activation. We found all mouse and human DC subsets were potently activated by STING stimulation. As expected, Type I IFNs were produced by both mouse and human plasmacytoid DCs. However, mouse and human plasmacytoid and conventional DCs all produced type III IFNs (i.e., IFN-λs) in response to STING activation. Of particular interest, all human DCs produced large amounts of IFN-λ1, not expressed in the mouse genome. Furthermore, we also found differential cell death responses upon STING activation, observing rapid ablation of mouse, but not human, plasmacytoid DCs. STING-induced cell death in murine plasmacytoid DCs occurred in a cell-intrinsic manner and involved intrinsic apoptosis. These data highlight discordance between STING IFN and cell death responses in mouse and human DCs and caution against extrapolating STING-mediated events in mouse models to equivalent human outcomes.
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- 2022
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27. A Novel Bispecific Antibody Targeting PD-L1 and VEGF With Combined Anti-Tumor Activities
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Xiaopei Cui, Huifeng Jia, Hong Xin, Lei Zhang, Shi Chen, Simin Xia, Xue Li, Wei Xu, Xiaofang Chen, Yujie Feng, Xiaoyue Wei, Haijia Yu, Yanting Wang, Yifan Zhan, Xiangyang Zhu, and Xuemei Zhang
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bispecific antibodies ,VEGF ,PD-L1 ,biological activity ,inhibition of cancer growth ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Therapeutic monoclonal antibodies (mAbs) blocking immune checkpoints have been mainly used as monotherapy. Recently, combination therapy targeting multiple immune checkpoints has recently been explored to increase anti-cancer efficacy. Particularly, a single molecule targeting more than one checkpoints has been investigated. As dual blocking of PD-1/PD-L1 and VEGF/VEGFR has demonstrated synergism in anti-tumor activities, we developed a novel bispecific antibody, termed HB0025, which is formed via fusing the domain 2 of vascular endothelial growth factor receptor 1 (VEGFR1D2) and anti-PD-L1 mAb by using mAb-Trap technology. HB0025 almost completely retains the binding affinities and the biological activities in-vitro when compared with the parent anti-PD-L1 mAb or VEGFR1D2 fusion protein. Preclinical data demonstrated that HB0025 was more effective in inhibiting cancer growth than anti PD-L1 mAb or VEGFR1D2 fusion protein. Thus, our bispecific antibody may bring about greater clinical benefits and broader indications.
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- 2021
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28. Targeting the CCL2/CCR2 Axis in Cancer Immunotherapy: One Stone, Three Birds?
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Liyang Fei, Xiaochen Ren, Haijia Yu, and Yifan Zhan
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CCL2 ,CCR2 ,cancer immunotherapy ,macrophages ,T regulatory cells ,Immunologic diseases. Allergy ,RC581-607 - Abstract
CCR2 is predominantly expressed by monocytes/macrophages with strong proinflammatory functions, prompting the development of CCR2 antagonists to dampen unwanted immune responses in inflammatory and autoimmune diseases. Paradoxically, CCR2-expressing monocytes/macrophages, particularly in tumor microenvironments, can be strongly immunosuppressive. Thus, targeting the recruitment of immunosuppressive monocytes/macrophages to tumors by CCR2 antagonism has recently been investigated as a strategy to modify the tumor microenvironment and enhance anti-tumor immunity. We present here that beneficial effects of CCR2 antagonism in the tumor setting extend beyond blocking chemotaxis of suppressive myeloid cells. Signaling within the CCL2/CCR2 axis shows underappreciated effects on myeloid cell survival and function polarization. Apart from myeloid cells, T cells are also known to express CCR2. Nevertheless, tissue homing of Treg cells among T cell populations is preferentially affected by CCR2 deficiency. Further, CCR2 signaling also directly enhances Treg functional potency. Thus, although Tregs are not the sole type of T cells expressing CCR2, the net outcome of CCR2 antagonism in T cells favors the anti-tumor arm of immune responses. Finally, the CCL2/CCR2 axis directly contributes to survival/growth and invasion/metastasis of many types of tumors bearing CCR2. Together, CCR2 links to two main types of suppressive immune cells by multiple mechanisms. Such a CCR2-assoicated immunosuppressive network is further entangled with paracrine and autocrine CCR2 signaling of tumor cells. Strategies to target CCL2/CCR2 axis as cancer therapy in the view of three types of CCR2-expessing cells in tumor microenvironment are discussed.
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- 2021
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29. TBK1 and IKKε Act Redundantly to Mediate STING-Induced NF-κB Responses in Myeloid Cells
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Katherine R. Balka, Cynthia Louis, Tahnee L. Saunders, Amber M. Smith, Dale J. Calleja, Damian B. D’Silva, Fiona Moghaddas, Maximilien Tailler, Kate E. Lawlor, Yifan Zhan, Christopher J. Burns, Ian P. Wicks, Jonathan J. Miner, Benjamin T. Kile, Seth L. Masters, and Dominic De Nardo
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Biology (General) ,QH301-705.5 - Abstract
Summary: Stimulator of Interferon Genes (STING) is a critical component of host innate immune defense but can contribute to chronic autoimmune or autoinflammatory disease. Once activated, the cyclic guanosine monophosphate (GMP)-adenosine monophosphate (AMP) (cGAMP) synthase (cGAS)-STING pathway induces both type I interferon (IFN) expression and nuclear factor-κB (NF-κB)-mediated cytokine production. Currently, these two signaling arms are thought to be mediated by a single upstream kinase, TANK-binding kinase 1 (TBK1). Here, using genetic and pharmacological approaches, we show that TBK1 alone is dispensable for STING-induced NF-κB responses in human and mouse immune cells, as well as in vivo. We further demonstrate that TBK1 acts redundantly with IκB kinase ε (IKKε) to drive NF-κB upon STING activation. Interestingly, we show that activation of IFN regulatory factor 3 (IRF3) is highly dependent on TBK1 kinase activity, whereas NF-κB is significantly less sensitive to TBK1/IKKε kinase inhibition. Our work redefines signaling events downstream of cGAS-STING. Our findings further suggest that cGAS-STING will need to be targeted directly to effectively ameliorate the inflammation underpinning disorders associated with STING hyperactivity. : Activation of NF-κB via STING is considered to be exclusively dependent on TBK1. Balka et al. now show that, although TBK1 and its kinase activity are critical for IRF3 activation and type I IFNs, it is dispensable for NF-κB. Instead, TBK1 and IKKε act redundantly to mediate STING-induced NF-κB responses. Keywords: STING, cGAS, innate immunity, NF-κB, TBK1, IKKε, signal transduction, type I interferons, cytokines, protein kinases
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- 2020
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30. CIS controls the functional polarization of GM-CSF-derived macrophages
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Shengbo Zhang, Jai Rautela, Naiara G. Bediaga, Tatiana B. Kolesnik, Yue You, Junli Nie, Laura F. Dagley, Justin Bedo, Hanqing Wang, Li Sun, Robyn Sutherland, Elliot Surgenor, Nadia Iannarella, Rhys Allan, Fernando Souza-Fonseca-Guimaraes, Yi Xie, Qike Wang, Yuxia Zhang, Yuekang Xu, Stephen L. Nutt, Andrew M. Lew, Nicholas D. Huntington, Sandra E. Nicholson, Michaël Chopin, and Yifan Zhan
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Infectious Diseases ,Macrophages ,Interferon Regulatory Factors ,Immunology ,Granulocyte-Macrophage Colony-Stimulating Factor ,Cytokines ,Immunology and Allergy ,Cell Differentiation ,Monocytes - Abstract
The cytokine granulocyte-macrophage-colony stimulating factor (GM-CSF) possesses the capacity to differentiate monocytes into macrophages (MØs) with opposing functions, namely, proinflammatory M1-like MØs and immunosuppressive M2-like MØs. Despite the importance of these opposing biological outcomes, the intrinsic mechanism that regulates the functional polarization of MØs under GM-CSF signaling remains elusive. Here, we showed that GM-CSF-induced MØ polarization resulted in the expression of cytokine-inducible SH2-containing protein (CIS) and that CIS deficiency skewed the differentiation of monocytes toward immunosuppressive M2-like MØs. CIS deficiency resulted in hyperactivation of the JAK-STAT5 signaling pathway, consequently promoting downregulation of the transcription factor Interferon Regulatory Factor 8 (IRF8). Loss- and gain-of-function approaches highlighted IRF8 as a critical regulator of the M1-like polarization program. In vivo, CIS deficiency induced the differentiation of M2-like macrophages, which promoted strong Th2 immune responses characterized by the development of severe experimental asthma. Collectively, our results reveal a CIS-modulated mechanism that clarifies the opposing actions of GM-CSF in MØ differentiation and uncovers the role of GM-CSF in controlling allergic inflammation.
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- 2022
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31. XIAP Loss Triggers RIPK3- and Caspase-8-Driven IL-1β Activation and Cell Death as a Consequence of TLR-MyD88-Induced cIAP1-TRAF2 Degradation
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Kate E. Lawlor, Rebecca Feltham, Monica Yabal, Stephanie A. Conos, Kaiwen W. Chen, Stephanie Ziehe, Carina Graß, Yifan Zhan, Tan A. Nguyen, Cathrine Hall, Angelina J. Vince, Simon M. Chatfield, Damian B. D’Silva, Kenneth C. Pang, Kate Schroder, John Silke, David L. Vaux, Philipp J. Jost, and James E. Vince
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Toll-like receptor ,NLRP3 ,RIPK3 ,caspase-8 ,TNFR2 ,XIAP ,cIAP1 ,necroptosis ,interferon ,autoinflammatory disease ,Biology (General) ,QH301-705.5 - Abstract
X-linked Inhibitor of Apoptosis (XIAP) deficiency predisposes people to pathogen-associated hyperinflammation. Upon XIAP loss, Toll-like receptor (TLR) ligation triggers RIPK3-caspase-8-mediated IL-1β activation and death in myeloid cells. How XIAP suppresses these events remains unclear. Here, we show that TLR-MyD88 causes the proteasomal degradation of the related IAP, cIAP1, and its adaptor, TRAF2, by inducing TNF and TNF Receptor 2 (TNFR2) signaling. Genetically, we define that myeloid-specific cIAP1 loss promotes TLR-induced RIPK3-caspase-8 and IL-1β activity in the absence of XIAP. Importantly, deletion of TNFR2 in XIAP-deficient cells limited TLR-MyD88-induced cIAP1-TRAF2 degradation, cell death, and IL-1β activation. In contrast to TLR-MyD88, TLR-TRIF-induced interferon (IFN)β inhibited cIAP1 loss and consequent cell death. These data reveal how, upon XIAP deficiency, a TLR-TNF-TNFR2 axis drives cIAP1-TRAF2 degradation to allow TLR or TNFR1 activation of RIPK3-caspase-8 and IL-1β. This mechanism may explain why XIAP-deficient patients can exhibit symptoms reminiscent of patients with activating inflammasome mutations.
- Published
- 2017
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- View/download PDF
32. Cognate antigen engagement on parenchymal cells stimulates CD8+ T cell proliferation in situ
- Author
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Robyn M. Sutherland, Sarah L. Londrigan, Jamie L. Brady, Emma M. Carrington, Julia M. Marchingo, Susanne Heinzel, Philip D. Hodgkin, Kate L. Graham, Thomas W. Kay, Yifan Zhan, and Andrew M. Lew
- Subjects
Science - Abstract
Professional antigen presenting cells (APC) are the major activator of T cells that then hone to sites of inflammation. Using islet cell grafts, here the authors show that parenchymal cells can present antigen to activate CD8+T cells at inflammatory sites, coining this a ‘mezzanine response’ distinct from primary and secondary responses associated with professional APCs.
- Published
- 2017
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- View/download PDF
33. The Pleiotropic Effects of the GM-CSF Rheostat on Myeloid Cell Differentiation and Function: More Than a Numbers Game
- Author
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Yifan Zhan, Andrew M. Lew, and Michael Chopin
- Subjects
GM-CSF ,macrophages ,dendritic cells ,differentiation ,function ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Granulocyte Macrophage-Colony Stimulating Factor (GM-CSF) is a myelopoietic growth factor that has pleiotropic effects not only in promoting the differentiation of immature precursors into polymorphonuclear neutrophils (PMNs), monocytes/macrophages (MØs) and dendritic cells (DCs), but also in controlling the function of fully mature myeloid cells. This broad spectrum of GM-CSF action may elicit paradoxical outcomes—both immunostimulation and immunosuppression—in infection, inflammation, and cancer. The complexity of GM-CSF action remains to be fully unraveled. Several aspects of GM-CSF action could contribute to its diverse biological consequences. Firstly, GM-CSF as a single cytokine affects development of most myeloid cells from progenitors to mature immune cells. Secondly, GM-CSF activates JAK2/STAT5 and also activate multiple signaling modules and transcriptional factors that direct different biological processes. Thirdly, GM-CSF can be produced by different cell types including tumor cells in response to different environmental cues; thus, GM-CSF quantity can vary greatly under different pathophysiological settings. Finally, GM-CSF signaling is also fine-tuned by other less defined feedback mechanisms. In this review, we will discuss the role of GM-CSF in orchestrating the differentiation, survival, and proliferation during the generation of multiple lineages of myeloid cells (PMNs, MØs, and DCs). We will also discuss the role of GM-CSF in regulating the function of DCs and the functional polarization of MØs. We highlight how the dose of GM-CSF and corresponding signal strength acts as a rheostat to fine-tune cell fate, and thus the way GM-CSF may best be targeted for immuno-intervention in infection, inflammation and cancer.
- Published
- 2019
- Full Text
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34. Convective Boundary Layer Clouds as Observed with Ground-Based Lidar at a Mid-Latitude Plain Site.
- Author
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Yifan Zhan, Fan Yi, Fuchao Liu, Yunpeng Zhang, Changming Yu, and Jun Zhou
- Published
- 2021
- Full Text
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35. Structural and functional insights into a novel pre-clinical-stage antibody targeting IL-17A for treatment of autoimmune diseases
- Author
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Jin-Gen, Xu, Huifeng, Jia, Shi, Chen, Jingyue, Xu, Yifan, Zhan, Haijia, Yu, Wei, Wang, Xi, Kang, Xiaopei, Cui, Yujie, Feng, Xiaofang, Chen, Wei, Xu, Xianfei, Pan, Xiaoyue, Wei, Hui, Li, Yanting, Wang, Simin, Xia, Xiaoyan, Liu, Lixiang, Yang, Yang, He, and Xiangyang, Zhu
- Subjects
Macaca fascicularis ,Mice ,Structural Biology ,Interleukin-17 ,Animals ,Antibodies, Monoclonal ,Humans ,Psoriasis ,General Medicine ,Molecular Biology ,Biochemistry ,Autoimmune Diseases - Abstract
The pro-inflammatory cytokine interleukin-17A (IL-17A) is a key driver of multiple inflammatory and immune disorders. Therapeutic antibodies targeting IL-17A have been proven effective in treating patients with these diseases; however, large variations in clinical outcomes have been observed with different antibodies. In this study, we developed HB0017, a novel monoclonal antibody that targets human IL-17A. HB0017 specifically and strongly bound to human, cynomolgus monkey, and mouse IL-17A at the physiological interface with the IL-17A receptor. In human and monkey cells, HB0017 potently antagonized the functions of IL-17A through competitive binding. HB0017 functioned equivalently to that of clinically approved antibodies in terms of therapeutic efficacy for inflammatory disorders and psoriasis in a mouse model. The results indicate that HB0017 may be an alternative biological therapy for treating patients with inflammation and autoimmune diseases.
- Published
- 2022
- Full Text
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36. Co-engagement of TIGIT+immune cells to PD-L1+tumours by a bispecific antibody potentiates T-cell response and tumour control
- Author
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Xiaopei Cui, Xi Zhu, Haijia Yu, Jingen Xu, Xiaoyue Wei, Shi Chen, Yangtin Wang, Xiaofang Chen, Yujie Feng, Xiaochen Ren, Liyang Fei, Bin Xie, Mingwei Li, Xue Li, Huifeng Jia, Simin Xie, Li Chen, Yong Cheng, Lei Zhang, Haidong Li, Xiangyang Zhu, and Yifan Zhan
- Abstract
Co-targeting PD-1/PD-L1 and TIGIT/CD226 is being pursued to broaden the efficacy of current immunotherapy. Here we demonstrate that a bispecific antibody (BsAb) targeting PD-L1 and TIGIT, HB0036, shows major advantages over the combination of the two parental monoclonal Abs (mAbs). We demonstrated that HB0036 co-engages PD-L1+tumour cells and TIGIT+T cells, and thereby upregulates CD226 on T cells and induces a greater T-cell proliferative response compared to the combination of the parental antibodiesin vitro.In vivo, HB0036 recruits greater amounts of TIGIT antibody in PD-L1+tumours but not in PD-L1-tumours, compared with therapy using the two parental antibodies. We also observed improved tumour control and favourable immunological signatures with HB0036 in syngeneic and xenograft tumour models. Collectively, these findings demonstrate that bispecific antibodies targeting PD-L1 and TIGIT offer superior benefits in cancer immunotherapy compared with therapy using the two parental antibodies. Based on these studies, a phase I clinical trial with HB0036 has been initiated in patients with solid tumours (NCT05417321).
- Published
- 2023
- Full Text
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37. Blimp1 Prevents Methylation of Foxp3 and Loss of Regulatory T Cell Identity at Sites of Inflammation
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Garima Garg, Andreas Muschaweckh, Helena Moreno, Ajithkumar Vasanthakumar, Stefan Floess, Gildas Lepennetier, Rupert Oellinger, Yifan Zhan, Tommy Regen, Michael Hiltensperger, Christian Peter, Lilian Aly, Benjamin Knier, Lakshmi Reddy Palam, Reuben Kapur, Mark H. Kaplan, Ari Waisman, Roland Rad, Gunnar Schotta, Jochen Huehn, Axel Kallies, and Thomas Korn
- Subjects
Biology (General) ,QH301-705.5 - Abstract
Summary: Foxp3+ regulatory T (Treg) cells restrict immune pathology in inflamed tissues; however, an inflammatory environment presents a threat to Treg cell identity and function. Here, we establish a transcriptional signature of central nervous system (CNS) Treg cells that accumulate during experimental autoimmune encephalitis (EAE) and identify a pathway that maintains Treg cell function and identity during severe inflammation. This pathway is dependent on the transcriptional regulator Blimp1, which prevents downregulation of Foxp3 expression and “toxic” gain-of-function of Treg cells in the inflamed CNS. Blimp1 negatively regulates IL-6- and STAT3-dependent Dnmt3a expression and function restraining methylation of Treg cell-specific conserved non-coding sequence 2 (CNS2) in the Foxp3 locus. Consequently, CNS2 is heavily methylated when Blimp1 is ablated, leading to a loss of Foxp3 expression and severe disease. These findings identify a Blimp1-dependent pathway that preserves Treg cell stability in inflamed non-lymphoid tissues. : An inflammatory environment threatens the stability of Foxp3+ Treg cells. Garg et al. show that by expressing the transcriptional regulator Blimp1, Treg cells resist the IL-6-driven loss of Foxp3 in inflamed tissues. Blimp1 prevents the methylation and reduced expression of Foxp3 through inhibition of the methyltransferase Dnmt3a. Keywords: regulatory T cells, Blimp1, CNS2, epigenetic regulation, CNS, inflammation, DNA methyltransferases, Foxp3, Interleukin-6
- Published
- 2019
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38. GM-CSF Quantity Has a Selective Effect on Granulocytic vs. Monocytic Myeloid Development and Function
- Author
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Li Sun, Jai Rautela, Rebecca B. Delconte, Fernando Souza-Fonseca-Guimaraes, Emma M. Carrington, Robyn L. Schenk, Marco J. Herold, Nicholas D. Huntington, Andrew M. Lew, Yuekang Xu, and Yifan Zhan
- Subjects
GM-CSF ,dendritic cells ,inflammation mediators ,granulocytes ,cytokines ,Immunologic diseases. Allergy ,RC581-607 - Abstract
GM-CSF promotes myeloid differentiation of cultured bone marrow cells into cells of the granulocytic and monocytic lineage; the latter can further differentiate into monocytes/macrophages and dendritic cells. How GM-CSF selects for these different myeloid fates is unresolved. GM-CSF levels can change either iatrogenically (e.g., augmenting leukopoiesis after radiotherapy) or naturally (e.g., during infection or inflammation) resulting in different immunological outcomes. Therefore, we asked whether the dose of GM-CSF may regulate the development of three types of myeloid cells. Here, we showed that GM-CSF acted as a molecular rheostat where the quantity determined which cell type was favored; moreover, the cellular process by which this was achieved was different for each cell type. Thus, low quantities of GM-CSF promoted the granulocytic lineage, mainly through survival. High quantities promoted the monocytic lineage, mainly through proliferation, whereas moderate quantities promoted moDCs, mainly through differentiation. Finally, we demonstrated that monocytes/macrophages generated with different doses of GM-CSF differed in function. We contend that this selective effect of GM-CSF dose on myeloid differentiation and function should be taken into consideration during pathophysiological states that may alter GM-CSF levels and during GM-CSF agonistic or antagonistic therapy.
- Published
- 2018
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39. An uncertainty reasoning method based on evidence theory.
- Author
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Caiquan Xiong, Yan He, and Yifan Zhan
- Published
- 2013
- Full Text
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40. Measurement report: Influence of long-range transported dust on cirrus cloud formation over remote ocean: Case studies near Midway Island, Pacific.
- Author
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Huijia Shen, Zhenping Yin, Yun He, Longlong Wang, Yifan Zhan, and Dongzhe Jing
- Abstract
Cirrus clouds play an essential role in regulating the global radiative balance and climate by both reflecting the incoming shortwave solar radiation and reserving the outgoing longwave radiation in the atmosphere. The cirrus-induced net radiative forcing is mainly determined by their microphysical properties, which are strongly associated with the competition between two ice-nucleating mechanisms, i.e., heterogeneous and homogeneous nucleation. However, it is still not well understood whether the long-range transoceanic dust can potentially urge heterogeneous nucleation to the initial ice formation in cirrus clouds even farther over vast remote ocean regions and the response of dominant ice-nucleating mechanism to the concentrations of available ice nucleating particles (INPs). Here we report on the influence of transpacific dust plumes on the ice formation in cirrus clouds via heterogeneous nucleation based on the combined observations of space-borne instruments, i.e., the Cloud-Aerosol Lidar with Orthogonal Polarization (CALIOP) and Cloud Profiling Radar (CPR). Two cases near Midway Island (28.21°N, 177.38°W), located in the central Pacific, are studied, in which the long-range transported dust plumes originate from intense Asian dust events. For both cases, partial cloud parcels show the typical in-cloud ice crystal number concentrations (ICNC) of <100 L
-1 for heterogeneous nucleation with a good agreement (within an order of magnitude) of in-cloud ICNC and nearby dust-related INP concentration (INPC) values, indicating that dust-related heterogeneous nucleation is dominated in ice formation. In addition, for the other parts of clouds without sufficient INP supply, homogeneous nucleation can still be dominated with ICNC values exceeding 300 L-1 . Therefore, dust events with sufficient intensity are capable of conducting long-range transport and influencing cirrus formation over remote ocean regions. This study shows that the natural supply of effective INPs to the upper troposphere, such as long-range transported dust aerosols can increase the cloud cover to reflect more solar radiation over oceanic regions and modulate the microphysical properties of cirrus clouds through different ice-nucleating regimes, both of which may further result in a cooling effect on global climate and should be well considered in climate evaluation. [ABSTRACT FROM AUTHOR]- Published
- 2023
- Full Text
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41. Life and Death of Activated T Cells: How Are They Different from Naïve T Cells?
- Author
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Yifan Zhan, Emma M. Carrington, Yuxia Zhang, Susanne Heinzel, and Andrew M. Lew
- Subjects
activated T cells ,apoptosis ,necroptosis ,epigenetics ,autoimmunity ,treatment ,Immunologic diseases. Allergy ,RC581-607 - Abstract
T cells are pivotal in immunity and immunopathology. After activation, T cells undergo a clonal expansion and differentiation followed by a contraction phase, once the pathogen has been cleared. Cell survival and cell death are critical for controlling the numbers of naïve T cells, effector, and memory T cells. While naïve T cell survival has been studied for a long time, more effort has gone into understanding the survival and death of activated T cells. Despite this effort, there is still much to be learnt about T cell survival, as T cells transition from naïve to effector to memory. One key advance is the development of inhibitors that may allow the temporal study of survival mechanisms operating in these distinct cell states. Naïve T cells were highly reliant on BCL-2 and sensitive to BCL-2 inhibition. Activated T cells are remarkably different in their regulation of apoptosis by pro- and antiapoptotic members of the BCL-2 family, rendering them differentially sensitive to antagonists blocking the function of one or more members of this family. Recent progress in understanding other programmed cell death mechanisms, especially necroptosis, suggests a unique role for alternative pathways in regulating death of activated T cells. Furthermore, we highlight a mechanism of epigenetic regulation of cell survival unique to activated T cells. Together, we present an update of our current understanding of the survival requirement of activated T cells.
- Published
- 2017
- Full Text
- View/download PDF
42. Monocyte-Derived Dendritic Cells Impair Early Graft Function following Allogeneic Islet Transplantation
- Author
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Kevin V. Chow, Emma M. Carrington, Yifan Zhan, Andrew M. Lew, and Robyn M. Sutherland
- Subjects
Medicine - Abstract
Islet transplantation can cure type 1 diabetes but is limited by lack of donor organs and early graft dysfunction, such that many patients require multiple transplants to achieve insulin independence. Monocyte-derived dendritic cells (moDCs) arise during inflammation and allograft encounters where they can promote various innate and adaptive immune responses. To determine whether moDCs impair early graft function following allogeneic islet transplantation, we transplanted MHC-mismatched BALB/c (H-2d) islets into diabetic C57BL/6-CCR2. DTR recipients (H-2b) treated with either saline (control) or diphtheria toxin (DT) to deplete moDCs. Graft function was assessed by blood glucose (BG) measurement. DT treatment resulted in specific depletion of graft site moDCs posttransplant. Despite equivalent pretransplant BG levels [27.0 ± 1.3 vs. 29.6 ± 1.1 mM, not significant (ns)], DT recipients achieved lower posttransplant BG levels and better rates of normoglycemia than control recipients (11.0 ± 1.9 vs. 19.1 ± 1.4 mM, p = 0.004) at 1 day posttransplant in diabetic recipients. When a suboptimal donor dose of 200 islets was transplanted, DT-induced moDC depletion resulted in normoglycemia in 78% compared to 25% of control recipients ( p = 0.03). As well as amelioration of graft dysfunction in the immediate peritransplant period, prolonged DT administration (15 days posttransplant) resulted in improved graft survival (21 vs. 11 days, p = 0.005). moDCs impair early graft function post-allogeneic islet transplantation. moDC depletion may allow for improved early graft function, permit transplantation with lower islet masses, and enhance graft survival.
- Published
- 2017
- Full Text
- View/download PDF
43. IL-17 production by tissue-resident MAIT cells is locally induced in children with pneumonia
- Author
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Gen Lu, James McCluskey, Hai-Bin Luo, Shengbo Zhang, Diyuan Yang, Ming Liu, Yuxia Zhang, Alexandra J. Corbett, Andrew M. Lew, Yifan Zhan, Jun Cui, Michael J Zhan, Junli Nie, Jun Wang, Vanessa L. Bryant, Li Zhang, Xiaoqiong Gu, Bingtai Lu, Huifeng Fan, and Zhenjun Chen
- Subjects
Male ,0301 basic medicine ,Immunology ,Inflammation ,Mucosal associated invariant T cell ,Lymphocyte Activation ,Article ,Monocytes ,Mucosal-Associated Invariant T Cells ,Immunophenotyping ,Transcriptome ,Mice ,03 medical and health sciences ,0302 clinical medicine ,T-Lymphocyte Subsets ,Animals ,Humans ,Immunology and Allergy ,Medicine ,Child ,Receptor ,business.industry ,Gene Expression Profiling ,Interleukin-17 ,Pneumonia ,medicine.disease ,Gene expression profiling ,Disease Models, Animal ,030104 developmental biology ,030220 oncology & carcinogenesis ,Cytokines ,Th17 Cells ,Female ,Disease Susceptibility ,Interleukin 17 ,Inflammation Mediators ,medicine.symptom ,business ,Biomarkers ,Transcription Factors - Abstract
Community-acquired pneumonia (CAP) contributes substantially to morbidity and mortality in children under the age of 5 years. In examining bronchoalveolar lavages (BALs) of children with CAP, we found that interleukin-17 (IL-17) production was significantly increased in severe CAP. Immune profiling showed that mucosal-associated invariant T (MAIT) cells from the BALs, but not blood, of CAP patients actively produced IL-17 (MAIT17). Single-cell RNA-sequencing revealed that MAIT17 resided in a BAL-resident PLZFhiCD103+ MAIT subset with high expression of hypoxia-inducible factor 1α (HIF-1α), reflecting the hypoxic state of the inflamed tissue. CAP BALs also contained a T-bet+ MAIT1 subset and a novel DDIT3+ (DNA damage-inducible transcript 3-positive) MAIT subset with low expression of HIF1A. Furthermore, MAIT17 differed from T-helper type 17 (Th17) cells in the expression of genes related to tissue location, innateness, and cytotoxicity. Finally, we showed that BAL monocytes were hyper-inflammatory and elicited differentiation of MAIT17. Thus, tissue-resident MAIT17 cells are induced at the infected respiratory mucosa, likely influenced by inflammatory monocytes, and contribute to IL-17-mediated inflammation during CAP.
- Published
- 2020
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- View/download PDF
44. CIS calibrates GM-CSF signalling strength to regulate macrophage polarization via a STAT5-IRF8 axis
- Author
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Shengbo Zhang, Jai Rautela, Naiara G Bediaga, Tatiana B Kolesnik, Yue You, Laura F Dagley, Justin Bedo, Hanqing Wang, Li Sun, Robyn Sutherland, Elliot Surgenor, Nadia Iannarella, Rhys Allan, Fernando Souza-Fonseca-Guimaraes, Yi Xie, Qike Wang, Yuxia Zhang, Yuekang Xu, Stephen L Nutt, Andrew M Lew, Nicholas D Huntington, Sandra E Nicholson, Michaël Chopin, and Yifan Zhan
- Abstract
The cytokine granulocyte-macrophage-colony stimulating factor (GM-CSF) possesses the ability to differentiate macrophages (MØs) with opposing functions, namely proinflammatory M1-like and immunosuppressive M2-like. Despite the importance and opposing functional outcomes of these processes, the intrinsic mechanism that regulates the functional polarization of MØs under GM-CSF signaling remains elusive. Here we show that GM-CSF induced MØs polarisation resulted in the expression of the Cytokine-inducible SH2-containing protein (CIS), and that CIS deficiency diverted differentiation of monocytes into immunosuppressive M2-like MØs expression. CIS deficiency resulted in the hyperactivation of the JAK-STAT5 signaling pathway, consequently promoting the downregulation of the transcription factor Interferon Regulatory Factor 8 (IRF8). Loss and gain of function approaches highlighted IRF8 as a critical instructor of the M1-like polarisation program. In vivo, CIS deficiency led to skewing to M2-like macrophages, which induced strong Th2 immune responses characterised by the development of severe experimental asthma. Collectively, we reveal a CIS-censored mechanism interpreting the opposing actions of GM-CSF in MØ differentiation and uncovering its role in controlling allergic inflammation.
- Published
- 2022
- Full Text
- View/download PDF
45. Perk Consumption and CEO Turnover
- Author
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Wai Leung, Yifan Zhan, and Hung-Gay Fung
- Subjects
History ,Polymers and Plastics ,Business and International Management ,Industrial and Manufacturing Engineering - Published
- 2022
- Full Text
- View/download PDF
46. Differential requirement for the Polycomb repressor complex 2 in dendritic cell and tissue-resident myeloid cell homeostasis
- Author
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Wang H. J. Cao, Pedro L. Baldoni, Yuxia Zhang, Gordon K. Smyth, Yifan Zhan, Michael Chopin, Ian P. Wicks, Hannah D. Coughlan, Andrew M. Lew, Nicolas Jacquelot, Warren S. Alexander, Leonard C. Harrison, Jai Rautela, Marc Pellegrini, Cynthia Louis, Simon Preston, Stephen L. Nutt, and Shengbo Zhang
- Subjects
Mice, Knockout ,Immunology ,Polycomb Repressive Complex 2 ,Repressor ,Mice, Transgenic ,chemical and pharmacologic phenomena ,Dendritic Cells ,General Medicine ,Dendritic cell ,biochemical phenomena, metabolism, and nutrition ,Biology ,Cell biology ,Mice, Inbred C57BL ,Mice ,Immune system ,Animals ,Homeostasis ,bacteria ,Myeloid Cells ,Myeloid cell homeostasis - Abstract
Dendritic cells (DCs) and macrophages are at the forefront of immune responses, modifying their transcriptional programs in response to their tissue environment or immunological challenge. Posttranslational modifications of histones, such as histone H3 lysine-27 trimethylation (H3K27me3) by the Polycomb repressive complex 2 (PRC2), are tightly associated with epigenetic regulation of gene expression. To explore whether H3K27me3 is involved in either the establishment or function of the mononuclear phagocyte system, we selectively deleted core components of PRC2, either EZH2 or SUZ12, in CD11c-expressing myeloid cells. Unexpectedly, EZH2 deficiency neither prevented the deposition and maintenance of H3K27me3 in DCs nor hindered DC/macrophage homeostasis. In contrast, SUZ12 deficiency markedly impaired the capacity of DCs and macrophages to maintain H3K27me3. SUZ12 ablation induced a rapid loss of the alveolar macrophage and Langerhans cell networks under both steady state and inflammatory conditions because these cells could no longer proliferate to facilitate their self-renewal. Despite the reduced H3K27me3, DC development and function were unaffected by SUZ12 ablation, suggesting that PRC2-mediated gene repression was dispensable for DC homeostasis. Thus, the role of SUZ12 highlights the fundamentally different homeostatic mechanisms used by tissue-resident myeloid cells versus DCs.
- Published
- 2021
- Full Text
- View/download PDF
47. Cystatin C regulates major histocompatibility complex‐<scp>II</scp>–peptide presentation and extracellular signal‐regulated kinase‐dependent polarizing cytokine production by bone marrow‐derived dendritic cells
- Author
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Shuangchao Liang, Shun Chen, Wenjie Zhang, Yuekang Xu, Mengting Zi, Yifan Zhan, Shan Liu, Jiqiong Hu, Lei Liu, Fengge Wang, Li Sun, Andrew M. Lew, and Yanfang Zhao
- Subjects
0301 basic medicine ,Proteases ,medicine.medical_treatment ,Immunology ,Antigen presentation ,Bone Marrow Cells ,Nitric Oxide ,Major histocompatibility complex ,Cell Line ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,medicine ,Animals ,Immunology and Allergy ,Cystatin C ,Extracellular Signal-Regulated MAP Kinases ,Cell Proliferation ,Antigen Presentation ,biology ,Chemistry ,Histocompatibility Antigens Class II ,Cell Polarity ,Cell Differentiation ,Dendritic Cells ,Cell Biology ,Dendritic cell ,Th1 Cells ,Cell biology ,Mice, Inbred C57BL ,030104 developmental biology ,Cytokine ,biology.protein ,Cytokines ,Th17 Cells ,Cystatin ,Peptides ,Chickens ,030215 immunology - Abstract
Cystatin C is a ubiquitously expressed cysteine protease inhibitor that protects cells from either improper hydrolysis by endogenous proteases or pathogen growth/virulence by exogenous proteases. Although commonly used as a serum biomarker for evaluating renal function, cystatin C is associated with many immunological disorders under various pathophysiological conditions. How cystatin C affects immune cells, especially dendritic cells (DCs), however, is far from clear. In this study, we found that pharmacological treatment with or genetic overexpression of cystatin C in bone marrow-derived DCs (BMDCs) reduced their capacity to stimulate CD4+ T-cell proliferation, despite increased antigen uptake. This reduced capacity corresponded with reduced major histocompatibility complex-II presentation owing to diminished levels of the chaperon H2-DM in BMDCs. Instead of promoting proliferation, cystatin C promoted skewing of T cells toward proinflammatory T-helper (Th)1/Th17 differentiation. This was mediated by augmented extracellular signal-regulated kinase 1/2 mitogen-activated protein kinase phosphorylation in BMDCs, leading to secretion of polarizing cytokines, which in turn led to the Th deviation. Collectively, our study explained the cellular and molecular basis of how this protease inhibitor can regulate immune responses, namely by affecting BMDCs and their cytokine pathway. Our results might open up an avenue for the development of therapeutic agents for the treatment of cystatin C-related immunological diseases.
- Published
- 2019
- Full Text
- View/download PDF
48. BCL-XL antagonism selectively reduces neutrophil life span within inflamed tissues without causing neutropenia
- Author
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Jai Rautela, Peter E. Czabotar, Tobias Kratina, Christine R. Keenan, Yifan Zhan, Huon L. Wong, Nicholas D. Huntington, Manuela S Hancock, Christine A White, Emma M. Carrington, Ahmad Wardak, Vanessa L. Bryant, Wesley Wong, Rhys S. Allan, Guillaume Lessene, Yuyan Yang, Damian B D'Silva, Robyn L Schenk, Andrew M. Lew, Jacinta Hansen, Nadia Iannarella, Marco J Herold, Cynthia Louis, Robyn M. Sutherland, Ian P. Wicks, and Duong Nhu
- Subjects
0301 basic medicine ,Neutropenia ,Neutrophils ,Longevity ,Inflammation ,Bcl-xL ,Apoptosis ,Granulocyte ,03 medical and health sciences ,Phagocytes, Granulocytes, and Myelopoiesis ,Mice ,0302 clinical medicine ,medicine ,Animals ,biology ,business.industry ,Hematology ,Colony-stimulating factor ,medicine.disease ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Immunology ,biology.protein ,Bone marrow ,medicine.symptom ,business ,Ex vivo - Abstract
Neutrophils help to clear pathogens and cellular debris, but can also cause collateral damage within inflamed tissues. Prolonged neutrophil residency within an inflammatory niche can exacerbate tissue pathology. Using both genetic and pharmacological approaches, we show that BCL-XL is required for the persistence of neutrophils within inflammatory sites in mice. We demonstrate that a selective BCL-XL inhibitor (A-1331852) has therapeutic potential by causing apoptosis in inflammatory human neutrophils ex vivo. Moreover, in murine models of acute and chronic inflammatory disease, it reduced inflammatory neutrophil numbers and ameliorated tissue pathology. In contrast, there was minimal effect on circulating neutrophils. Thus, we show a differential survival requirement in activated neutrophils for BCL-XL and reveal a new therapeutic approach to neutrophil-mediated diseases.
- Published
- 2021
49. The closely related CD103+ dendritic cells (DCs) and lymphoid-resident CD8+ DCs differ in their inflammatory functions.
- Author
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Zhijun Jiao, Sammy Bedoui, Jamie L Brady, Anne Walter, Michael Chopin, Emma M Carrington, Robyn M Sutherland, Stephen L Nutt, Yuxia Zhang, Hyun-Ja Ko, Li Wu, Andrew M Lew, and Yifan Zhan
- Subjects
Medicine ,Science - Abstract
Migratory CD103+ and lymphoid-resident CD8+ dendritic cells (DCs) share many attributes, such as dependence on the same transcription factors, cross-presenting ability and expression of certain surface molecules, such that it has been proposed they belong to a common sub-lineage. The functional diversity of the two DC types is nevertheless incompletely understood. Here we reveal that upon skin infection with herpes simplex virus, migratory CD103+ DCs from draining lymph nodes were more potent at inducing Th17 cytokine production by CD4+ T cells than CD8+ DCs. This superior capacity to drive Th17 responses was also evident in CD103+ DCs from uninfected mice. Their differential potency to induce Th17 differentiation was reflected by higher production of IL-1β and IL-6 by CD103+ DCs compared with CD8+ DCs upon stimulation. The two types of DCs from isolated lymph nodes also differ in expression of certain pattern recognition receptors. Furthermore, elevated levels of GM-CSF, typical of those found in inflammation, substantially increased the pool size of CD103+ DCs in lymph nodes and skin. We argue that varied levels of GM-CSF may explain the contrasting reports regarding the positive role of GM-CSF in regulating development of CD103+ DCs. Together, we find that these two developmentally closely-related DC subsets display functional differences and that GM-CSF has differential effect on the two types of DCs.
- Published
- 2014
- Full Text
- View/download PDF
50. Rotavirus infection induces transient pancreatic involution and hyperglycemia in weanling mice.
- Author
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Margo C Honeyman, David Laine, Yifan Zhan, Sarah Londrigan, Carl Kirkwood, and Leonard C Harrison
- Subjects
Medicine ,Science - Abstract
Rotavirus is a ubiquitous double-stranded RNA virus responsible for most cases of infantile gastroenteritis. It infects pancreatic islets in vitro and is implicated as a trigger of autoimmune destruction of islet beta cells leading to type 1 diabetes, but pancreatic pathology secondary to rotavirus infection in vivo has not been documented. To address this issue, we inoculated 3 week-old C57Bl/6 mice at weaning with rhesus rotavirus, which is closely related to human rotaviruses and known to infect mouse islets in vitro. Virus was quantified in tissues by culture-isolation and enzyme-linked immunosorbent assay. A requirement for viral double stranded RNA was investigated in toll-like receptor 3 (TLR3)-deficient mice. Cell proliferation and apoptosis, and insulin expression, were analyzed by immunohistochemistry. Following rotavirus inoculation by gavage, two phases of mild, transient hyperglycemia were observed beginning after 2 and 8 days. In the first phase, widespread apoptosis of pancreatic cells was associated with a decrease in pancreas mass and insulin production, without detectable virus in the pancreas. These effects were mimicked by injection of the double-stranded RNA mimic, polyinosinic-polycytidylic acid, and were TLR3-dependent. By the second phase, the pancreas had regenerated but islets were smaller than normal and viral antigen was then detected in the pancreas for several days. These findings directly demonstrate pathogenic effects of rotavirus infection on the pancreas in vivo, mediated initially by the interaction of rotavirus double-stranded RNA with TLR3.
- Published
- 2014
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