11 results on '"Ying L. Li"'
Search Results
2. Discovery of Novel and Potent Leukotriene B4 Receptor Antagonists. Part 1
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Tina Molinaro, Robert Alan Goodnow, Louis M. Renzetti, Alexandra Hicks, Satish Choudhry, Xin Wei, Gesine J. Hermann, Qi Qiao, Anjula Pamidimukkala, A. Robert Catala, Maureen Hargaden, Jian Ping Lou, Nadine Tare, John O’Neil, Ueli Gubler, Karen Pozzani, David J Moore, Jennifer Santiago, Ruben Marcano, Paul Gillespie, Rachid Hamid, Noal Cohen, Hyesun Oh, Lisa C. F. Chao, Laura Singer, Jefferson Wright Tilley, Romyr Dominique, Grazyna Kurylko, Ying L. Li, Radhika Venkat, Achyutharao Sidduri, Matthew Blake Wright, Ann F. Hoffman, Shahid Tannu, Gary Cavallo, Nader Fotouhi, Thomas Egan, Martin Lamb, Jessica D. Ventre, Agnieszka Kowalczyk, D Lavelle, and Helena Mancebo
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Primates ,Leukotriene B4 ,medicine.drug_class ,Guinea Pigs ,Drug Evaluation, Preclinical ,Receptors, Leukotriene B4 ,HL-60 Cells ,Pharmacology ,Receptors, G-Protein-Coupled ,Guinea pig ,Structure-Activity Relationship ,chemistry.chemical_compound ,Drug Discovery ,medicine ,Animals ,Humans ,Receptor ,ADME ,Chemistry ,Phenyl Ethers ,Leukotriene B4 receptor ,Receptor antagonist ,In vitro ,Rats ,Bioavailability ,Biochemistry ,Leukotriene Antagonists ,Molecular Medicine ,Protein Binding - Abstract
The inhibition of LTB(4) binding to and activation of G-protein-coupled receptors BLT1 and BLT2 is the premise of a treatment for several inflammatory diseases. In a lead optimization effort starting with the leukotriene B(4) (LTB(4)) receptor antagonist (2), members of a series of 3,5-diarylphenyl ethers were found to be highly potent inhibitors of LTB(4) binding to BLT1 and BLT2 receptors, with varying levels of selectivity depending on the substitution. In addition, compounds 33 and 38 from this series have good in vitro ADME properties, good oral bioavailability, and efficacy after oral delivery in guinea pig LTB(4) and nonhuman primate allergen challenge models. Further profiling in a rat non-GLP toxicity experiment provided the rationale for differentiation and selection of one compound (33) for clinical development.
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- 2010
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3. Dynamic Characteristic of High Strength Ring Chain under Different Launch Parameters
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Z, Qiang, primary, Ming L, Jun, additional, Feng L, Yong, additional, and Ying L, Li, additional
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- 2018
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4. Ionic-liquid matrices for quantitative analysis by MALDI-TOF mass spectrometry
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Michael L. Gross and Ying L. Li
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Analyte ,genetic structures ,Calibration curve ,Oligonucleotides ,Analytical chemistry ,Bradykinin ,010402 general chemistry ,Mass spectrometry ,01 natural sciences ,chemistry.chemical_compound ,Structural Biology ,Cations ,Calibration ,Animals ,Insulin ,Spectroscopy ,Reproducibility ,Chromatography ,010401 analytical chemistry ,Proteins ,Reproducibility of Results ,Melitten ,eye diseases ,0104 chemical sciences ,Molecular Weight ,Matrix-assisted laser desorption/ionization ,chemistry ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Ionic liquid ,Cattle ,sense organs ,Peptides ,Quantitative analysis (chemistry) - Abstract
Ionic liquid matrices (ILMs) were tested as MALDI matrices for quantification of oligodeoxynucleotides (ODNs), peptides, and small proteins. Good calibrations with high linearity and reproducibility were achieved over a broad concentration range for all the tested ILMs in spite of their different physical states. However, the standard deviation is higher for ILMs that are solid with visible crystals. The experimental results indicate various ILMs have different sensitivity owing to changes in their cation components. More importantly, we found that the slopes of the calibration curves correlate with the inverse of the peptide molecular weights, presenting an opportunity to predict a priori, the relative sensitivities (slopes of calibration plots) for various analytes that have similar hydrophobicites.
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- 2004
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5. Geometric network analysis provides prognostic information in patients with high grade serous carcinoma of the ovary treated with immune checkpoint inhibitors
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Rena Elkin, Jung Hun Oh, Ying L. Liu, Pier Selenica, Britta Weigelt, Jorge S. Reis-Filho, Dmitriy Zamarin, Joseph O. Deasy, Larry Norton, Arnold J. Levine, and Allen R. Tannenbaum
- Subjects
Medicine ,Genetics ,QH426-470 - Abstract
Abstract Network analysis methods can potentially quantify cancer aberrations in gene networks without introducing fitted parameters or variable selection. A new network curvature-based method is introduced to provide an integrated measure of variability within cancer gene networks. The method is applied to high-grade serous ovarian cancers (HGSOCs) to predict response to immune checkpoint inhibitors (ICIs) and to rank key genes associated with prognosis. Copy number alterations (CNAs) from targeted and whole-exome sequencing data were extracted for HGSOC patients (n = 45) treated with ICIs. CNAs at a gene level were represented on a protein–protein interaction network to define patient-specific networks with a fixed topology. A version of Ollivier–Ricci curvature was used to identify genes that play a potentially key role in response to immunotherapy and further to stratify patients at high risk of mortality. Overall survival (OS) was defined as the time from the start of ICI treatment to either death or last follow-up. Kaplan–Meier analysis with log-rank test was performed to assess OS between the high and low curvature classified groups. The network curvature analysis stratified patients at high risk of mortality with p = 0.00047 in Kaplan–Meier analysis in HGSOC patients receiving ICI. Genes with high curvature were in accordance with CNAs relevant to ovarian cancer. Network curvature using CNAs has the potential to be a novel predictor for OS in HGSOC patients treated with immunotherapy.
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- 2021
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6. Effects of LTB4 receptor antagonism on pulmonary inflammation in rodents and non-human primates
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Anjula Pamidimukkala, Jian Ping Lou, Paul Gillespie, Rachid Hamid, Hyesun Oh, Thomas H. March, D Lavelle, Lisa C. F. Chao, Tina Molinaro, Matthew Blake Wright, Martin Brovarney, A. Robert Catala, John O’Neil, Agnieszka Kowalczyk, Louis M. Renzetti, Nader Fotouhi, Maureen Hargaden, John Satjawatcharaphong, Karen Pozzani, Xin Wei, Thomas Egan, Radhika Venkat, Ruben Marcano, Shahid Tannu, Karim Dabbagh, Helena Mancebo, Laura Singer, Martin Lamb, David J Moore, Jessica D. Ventre, Janet M. Benson, Ying L. Li, Jennifer Santiago, Ann F. Hoffman, Alexandra Hicks, Gary Cavallo, Jose M. Lora, Robert Alan Goodnow, Ueli Gubler, Romyr Dominique, Achyutharao Sidduri, Nadine Tare, Qi Qiao, and Grazyna Kurylko
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Budesonide ,Lipopolysaccharides ,Male ,Primates ,ARDS ,Drug-Related Side Effects and Adverse Reactions ,Physiology ,Leukotriene B4 ,medicine.drug_class ,Guinea Pigs ,Receptors, Leukotriene B4 ,HL-60 Cells ,Lung injury ,Biochemistry ,chemistry.chemical_compound ,Mice ,Dogs ,Ozone ,Toxicity Tests ,medicine ,Hypersensitivity ,Animals ,Humans ,Benzodioxoles ,Pulmonary Eosinophilia ,Lung ,Pharmacology ,COPD ,Phenylpropionates ,business.industry ,Smoking ,hemic and immune systems ,Cell Biology ,Pneumonia ,respiratory system ,medicine.disease ,Receptor antagonist ,Neutrophilia ,respiratory tract diseases ,Rats ,chemistry ,Immunology ,lipids (amino acids, peptides, and proteins) ,Female ,medicine.symptom ,business ,circulatory and respiratory physiology ,medicine.drug - Abstract
Asthma, chronic obstructive pulmonary disease (COPD) and acute lung injury/acute respiratory distress syndrome (ALI/ARDS) are characterized by neutrophilic inflammation and elevated levels of leukotriene B4 (LTB4). However, the exact role of LTB4 pathways in mediating pulmonary neutrophilia and the potential therapeutic application of LTB4 receptor antagonists in these diseases remains controversial. Here we show that a novel dual BLT1 and BLT2 receptor antagonist, RO5101576, potently inhibited LTB4-evoked calcium mobilization in HL-60 cells and chemotaxis of human neutrophils. RO5101576 significantly attenuated LTB4-evoked pulmonary eosinophilia in guinea pigs. In non-human primates, RO5101576 inhibited allergen and ozone-evoked pulmonary neutrophilia, with comparable efficacy to budesonide (allergic responses). RO5101576 had no effects on LPS-evoked neutrophilia in guinea pigs and cigarette smoke-evoked neutrophilia in mice and rats. In toxicology studies RO5101576 was well-tolerated. Theses studies show differential effects of LTB4 receptor antagonism on neutrophil responses in vivo and suggest RO5101576 may represent a potential new treatment for pulmonary neutrophilia in asthma.
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- 2010
7. Tetrathiomolybdate (TM)-associated copper depletion influences collagen remodeling and immune response in the pre-metastatic niche of breast cancer
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Ying L. Liu, Cecilie Liv Bager, Nicholas Willumsen, Divya Ramchandani, Naomi Kornhauser, Lu Ling, Marta Cobham, Eleni Andreopoulou, Tessa Cigler, Anne Moore, Dayle LaPolla, Veronica Fitzpatrick, Maureen Ward, J. David Warren, Claudia Fischbach, Vivek Mittal, and Linda T. Vahdat
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Tetrathiomolybdate (TM) is a novel, copper-depleting compound associated with promising survival in a phase II study of patients with high-risk and triple-negative breast cancer. We sought to elucidate the mechanism of TM by exploring its effects on collagen processing and immune function in the tumor microenvironment (TME). Using an exploratory cohort, we identified markers of collagen processing (LOXL2, PRO-C3, C6M, and C1M) that differed between those with breast cancer versus controls. We measured these collagen biomarkers in TM-treated patients on the phase II study and detected evidence of decreased collagen cross-linking and increased degradation over formation in those without disease compared to those who experienced disease progression. Preclinical studies revealed decreased collagen deposition, lower levels of myeloid-derived suppressor cells, and higher CD4+ T-cell infiltration in TM-treated mice compared with controls. This study reveals novel mechanisms of TM targeting the TME and immune response with potential applications across cancer types.
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- 2021
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8. Quantification of diacylglycerol molecular species in biological samples by electrospray ionization mass spectrometry after one-step derivatization
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Philip D. Stahl, Michael L. Gross, Ying L. Li, and Xiong Su
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Chemical ionization ,Electrospray ,Spectrometry, Mass, Electrospray Ionization ,Chromatography ,Molecular Structure ,Electrospray ionization ,Mice, Obese ,Mass spectrometry ,Sensitivity and Specificity ,Article ,Analytical Chemistry ,Standard curve ,Diglycerides ,chemistry.chemical_compound ,Label-free quantification ,Mice ,chemistry ,Liver ,Lipidomics ,Animals ,lipids (amino acids, peptides, and proteins) ,Derivatization - Abstract
Diacylglycerols (DAGs) are important lipid intermediates in cellular trafficking and signaling. Their concentrations are altered in diabetes, cancer, and other disease states. Quantification of DAGs in biological samples may provide critical information to uncover molecular mechanisms leading to various cellular functional disorders. Recent advances in lipidomics using mass spectrometry have greatly accelerated global lipid analysis and quantification. Quantification of DAGs by electrospray mass spectrometry (ESI/MS), however, is challenged by the absence of a permanent charge on the molecule, its low proton affinity and acidity, and its low abundance under normal biological conditions. We describe here the introduction of a quaternary ammonium cation to DAG molecules, using N-chlorobetainyl chloride, to afford a derivatized DAG that gives 2 orders of magnitude higher signal intensities than their underivatized sodium adducts. A linear calibration curve in which peak intensity ratios are plotted versus molar ratios can be achieved by using ESI/MS with dilauroyl glycerol as the internal standard. Employing this new approach to this analyte, we found a 9-fold increase of total DAGs in the livers of obese db/db mice as compared to their heterozygous lean controls. This proven strategy can be used to detect and quantify DAG molecular species from biological samples using ESI/MS after one-step derivatization.
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- 2007
9. Lung and Blood Gene Expression Profiles from Cynomolgus Monkeys Exposed to Ozone
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Janet M. Benson, Galina Kourteva, Thomas H. March, Xin Wei, Holly Hilton, Alexandra Hicks, James Andrew Rosinski, and Ying L. Li
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chemistry.chemical_compound ,Lung ,medicine.anatomical_structure ,Ozone ,chemistry ,Gene expression ,Genetics ,medicine ,Biology ,Molecular Biology ,Biochemistry ,Molecular biology ,Biotechnology - Published
- 2008
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10. Ionic-Liquid Matrices for Improved Analysis of Phospholipids by MALDI-TOF Mass Spectrometry
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Ying L. Li, Michael L. Gross, and Fong-Fu Hsu
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Detection limit ,Ions ,Chromatography ,010401 analytical chemistry ,Analytical chemistry ,010402 general chemistry ,Mass spectrometry ,01 natural sciences ,0104 chemical sciences ,Ion ,Adduct ,Matrix (chemical analysis) ,Solutions ,chemistry.chemical_compound ,Matrix-assisted laser desorption/ionization ,chemistry ,Structural Biology ,Ionization ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Ionic liquid ,Spectroscopy ,Phospholipids - Abstract
The use of ionic liquid matrices (ILMs) for phospholipids (PLs) affords higher signal intensity, smaller spot size, improved spot homogeneity, better signal reproducibility, and comparable or better detection limits compared to that of the crystalline matrix 2,5-dihydroxybenzoic acid (2,5-DHB). The ionization products are comparable to those with 2,5-DHB although the use of ILMs gives a stronger tendency to produce alkali-metal-ion adducts and a lower extent of prompt fragmentation.
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11. Effects of Aging on the Proliferation and Differentiation Capacity of Human Periodontal Ligament Stem Cells.
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Du T, Liu N, Gu B, Li L, Yuan Y, Zhang W, and Zhang T
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- Adolescent, Adult, Alkaline Phosphatase genetics, Apoptosis, Cell Cycle, Cell Differentiation, Cell Proliferation, Humans, Middle Aged, Osteogenesis, Aging, Periodontal Ligament cytology, Stem Cells cytology
- Abstract
Objective The aim of this study is to investigate the proliferation, differentiation and apoptosis of periodontal ligament stem cells (PDLSC) derived from different aged donors, and to evaluate the effects of aging on the biological characteristics of PDLSC.Methods Periodontal ligament tissues were obtained from 24 surgically extracted human premolars during orthodontics therapy. The specimens were divided into three groups according to the donor's age. Group A: 18-20 years, group B: 30-35 years, group C: 45-50 years. PDLSC were isolated and cultured using a tissue-block-based enzymolytic method by limiting dilution assay. The colony forming efficiency of PDLSC for three experimental groups was determined. Senescence-Associated β-Galactosidase (SA-β-G) expression in the three groups was examined using β-galactosidase staining working solution. Cell cycle and apoptosis of the PDLSC were examined by the flow cytometry. Alkaline phosphatase (ALP) activity was evaluated by ALP staining. The expression of osteoplastic differentiation related genes Runt-related transcription factor-2 (Runx-2), Collagen Type 1 (col-1), and ALP of PDLSC were examined by quantitative real-time RT-PCR.Results The colony forming efficiency of PDLSC in Group A, B and C was 36.67%, 22.67% and 9.33%, respectively, which decreased with donors' age (P<0.05). SA-β-G expression of the senescent PDLSC in group A, B and C were 4.14%, 16.39%, 50.38%, respectively (P<0.05). Cells in G2/S phase was 38.73%, 29.88%, 18.25% (P<0.05), and the apoptosis rate was 1.57%, 4.56%, 5.84% (P<0.05), in group A, B and C respectively. The ALP staining in the three groups decreased with the increase of donors' ages, and the expression of Runx-2, col-1 and ALP decreased gradually from group A to group C (all P<0.05), which indicated the osteogenic differentiation capacity of PDLSC decreased while donor aging.Conclusion Human PDLSC could be successfully isolated from periodontal ligament tissues of different aged donors. However, the proliferation and osteogenic differentiation capacity of PDLSC decreased while donor aging.
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- 2017
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