38 results on '"Yiyun Shi"'
Search Results
2. Comprehensive analysis of 2097 patients with dystrophinopathy based on a database from 2011 to 2021
- Author
-
Lei Zhao, Yiyun Shi, Chaoping Hu, Shuizhen Zhou, Hui Li, Lifeng Zhang, Chuang Qian, Yiyao Zhou, Yi Wang, and Xihua Li
- Subjects
Dystrophinopathy ,Duchenne and Becker muscular dystrophies ,Patient management ,Genetic diagnosis ,Natural history ,Medicine - Abstract
Abstract Background An increasing number of clinical trials for new therapeutic strategies are underway or being considered for dystrophinopathy. Having detailed data on the natural progression of this condition is crucial for assessing the effectiveness of new drugs. However, there’s a lack of data regarding the long-term data on the natural course and how it’s managed in China. In this study, we offer a comprehensive overview of clinical and molecular findings, as well as treatment outcomes in the Chinese population. Methods Institutional data on all patients with dystrophinopathy from August 2011 to August 2021 were retrospectively reviewed. The data included geographic distribution, age at diagnosis, molecular findings, and treatment options, such as corticosteroids, cardiac interventions, and clinical outcomes. Results In total, 2097 patients with dystrophinopathy, including 1703 cases of Duchenne muscular dystrophy (DMD), 311 cases of Becker muscular dystrophy (BMD), 46 cases of intermediate muscular dystrophy (IMD), and 37 cases categorized as “pending” (individuals with an undetermined phenotype), were registered in the Children’s Hospital of Fudan University database for dystrophinopathy from August 2011 to August 2021. The spectrum of identified variants included exonic deletions (66.6%), exonic duplications (10.7%), nonsense variants (10.3%), splice-site variants (4.5%), small deletions (3.5%), small insertions/duplications (1.8%), and missense variants (0.9%). Four deep intronic variants and two inversion variants were identified. Regarding treatment, glucocorticoids were administered to 54.4% of DMD patients and 39.1% of IMD patients. The median age at loss of ambulation was 2.5 years later in DMD patients who received glucocorticoid treatment. Overall, one cardiac medicine at least was prescribed to 7.4% of DMD patients, 8.3% of IMD patients, and 2.6% of BMD patients. Additionally, ventilator support was required by four DMD patients. Eligibility for exon skipping therapy was found in 55.3% of DMD patients, with 12.9%, 10%, and 9.6% of these patients being eligible for skipping exons 51, 53, and 45, respectively. Conclusions This is one of the largest studies to have evaluated the natural history of dystrophinopathy in China, which is particularly conducive to the recruitment of eligible patients for clinical trials and the provision of real-world data to support drug development.
- Published
- 2024
- Full Text
- View/download PDF
3. Research progress of quantum artificial intelligence in smart city
- Author
-
Sumin Wang, Ning Wang, Tongyu Ji, Yiyun Shi, and Chao Wang
- Subjects
quantum artificial intelligence ,smart city ,d-wave quantum computer ,Telecommunication ,TK5101-6720 - Abstract
The rapid accumulation of big data in the Internet era has gradually decelerated the progress of Artificial Intelligence (AI). As Moore’s Law approaches its limit, it is imperative to break the constraints that are holding back artificial intelligence. Quantum computing and artificial intelligence have been advancing along the highway of human civilization for many years, emerging as new engines driving economic and social development. This article delves into the integration of quantum computing and artificial intelligence in both research and application. It introduces the capabilities of both universal quantum computers and special-purpose quantum computers that leverage quantum effects. The discussion further explores how quantum computing enhances classical artificial intelligence from four perspectives: quantum supervised learning, quantum unsupervised learning, quantum reinforcement learning, and quantum deep learning. In an effort to address the limitations of smart cities, this article explores the formidable potential of quantum artificial intelligence in the realm of smart cities. It does so by examining aspects such as intelligent transportation, urban operation assurance, urban planning, and information communication, showcasing a plethora of practical achievements in the process. In the foreseeable future, Quantum Artificial Intelligence (QAI) is poised to bring about revolutionary development to smart cities. The urgency lies in developing quantum artificial intelligence algorithms that are compatible with quantum computers, constructing an efficient, stable, and adaptive hybrid computing architecture that integrates quantum and classical computing, preparing quantum data as needed, and advancing controllable qubit hardware equipment to meet actual demands. The ultimate goal is to shape the next generation of artificial intelligence that possesses common sense cognitive abilities, robustness, excellent generalization capabilities, and interpretability.
- Published
- 2024
- Full Text
- View/download PDF
4. Preparation and characterization of liquefied eggplant branch bio-based controlled-release fertilizer
- Author
-
Yanle Guo, Fengyuan Zhuang, Qunxiang Cui, Shugang Zhang, Zhenping Hao, Yiyun Shi, Hao Lu, and Xiaoqing Shi
- Subjects
Coated material ,Eggplant branch ,Organosilicon ,Hydrophobic ,Characteristics ,Chemistry ,QD1-999 - Abstract
Abstract Bio-based coating materials have received increased attention because of their low-cost, environmentally friendly, and sustainable properties. In this paper, a novel coating material was developed to coat ureas using bio-based coating material derived from liquefied eggplant branches to form controlled-release ureas (CRUs). Also, the optimum proportion of liquefier was studied. Furthermore, dimethyl siloxane was used to modify liquified eggplant branches to make them hydrophobic, resulting in hydrophobic controlled-release ureas (SCRUs). This hydrophobic-enabled coating is environmentally friendly and highly efficient. The products were characterized by specific scanning electron microscopy, energy-dispersive X-ray spectroscopy, Fourier transform infrared spectroscopy, thermogravimetric analysis, and differential scanning calorimetry, and the water contact angles of CRUs and SCRUs were determined. The nutrient-release characteristics of the SCRUs in water were determined at 25 °C and compared with those of CRUs. The results showed that the modification with dimethyl siloxane reduced the N release rate and increased the longevity of the fertilizer coated with hydrophobic bio-based coating material. In addition, organosilicon atoms on the SCRU surface also block the micro-holes on the coating and thus reduce the entry of water onto the coating. The results suggest that the new coating technology can create a hydrophobic surface on bio-based coating material and thus improve their controlled-release characteristics.
- Published
- 2024
- Full Text
- View/download PDF
5. Extramedullary Hematopoiesis in Myelodysplastic Syndromes: A Systematic Literature Review
- Author
-
Chen Wang and Yiyun Shi
- Subjects
extramedullary hematopoiesis ,myelodysplastic syndromes ,ring sideroblasts ,Medicine - Abstract
Extramedullary hematopoiesis is rarely seen in patients with myelodysplastic syndromes, and its clinical characterizations are not well-defined. Here, we systematically reviewed the published literature to summarize the clinical manifestations, treatments, and long-term outcomes of biopsy-proven extramedullary hematopoiesis in patients with myelodysplastic syndromes. We included 41 patients, and ring sideroblasts were the most common myelodysplastic subtype (30.6%). Extramedullary hematopoiesis was typically symptomatic on presentation due to local compression, frequently involving the liver or spleen (36.6%), or the paravertebral region (24.4%). Notably, ring sideroblasts were predominantly seen in patients with non-hepatosplenic involvement (38.5 vs. 6.7%, p = 0.034). Interventions, when required, usually included surgery (36.8%) or radiation (13.2%), which led to symptomatic improvement in 55.5% of patients. The median overall survival of the current cohort was 7 months. The current study confirms the rarity of extramedullary hematopoiesis as a complication of myelodysplastic syndromes; however, its outcomes in response to systemic modern therapies require further investigation.
- Published
- 2022
- Full Text
- View/download PDF
6. Comprehensive profile and natural history of pediatric patients with spinal muscular atrophy: A large retrospective study from China
- Author
-
Chaoping Hu, Xihua Li, Yiyun Shi, Xiaomei Zhu, Lei Zhao, Wenhui Li, Shuizhen Zhou, and Yi Wang
- Subjects
spinal muscular atrophy ,survival motor neuron ,survival analysis ,pattern ,motor deterioration ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
BackgroundThere is a large population of people with spinal muscular atrophy (SMA) in China, and new disease-modifying therapies have become available recently. However, comprehensive data on the management and profile of treatment-naive SMA patients in China are still lacking.MethodsAs a retrospective study, a large cohort of treatment-naive patients with clinical and genetic diagnoses of 5q SMA were enrolled, ranging from neonatal to 18 years old, from the Neurology Department of Children's Hospital of Fudan University between January 2013 and December 2020. The data regarding their clinical presentations, genetic defects, motor function assessment results, and follow ups were reviewed.ResultsWe enrolled 392 SMA patients (male: female = 189: 203): 1a = 46, 1b = 44, 1c = 31, 2a = 119, 2b = 56, 3a = 52, 3b = 14, from 27 of the 34 administrative districts in China, and 389 patients harbored homozygous deletion of exon 7 in the SMN1 gene (99.2%). The median age of onset was 0.08 (range: 0–0.30), 0.25 (0.06–0.60), 0.42 (0.08–1.50), 0.67 (0.07–5.08), 1.0 (0.40–1.83), 1.5 (1.00–3.00), and 4.04 (1.80–12.00) years old for SMA 1a, 1b, 1c, 2a, 2b, 3a, and 3b patients, while the median age of first assessment was 0.25 (0.08–2.60), 0.42 (0.17–1.90), 0.80 (0.17–4.5), 2.50 (0.5–15.83), 2.92 (1.08–13.42), 4.25 (1.58–17.33), and 7.34 (3.67–14.00) years old, respectively. Patients were followed up with for up to 15.8 years. The median event-free survival time was 7 months, 15 months, and indeterminate in SMA 1a, 1b, and 1c patients (p < 0.0001), with a better survival situation for higher SMN2 copies (p = 0.0171). The median age of sitting loss was 5.75 years and 13.5 years in SMA 2a and 2b (p = 0.0214) and that of ambulation loss was 9.0 years and undefined in SMA 3a and 3b (p = 0.0072). Cox regression analysis showed that higher SMN2 copies indicated better remaining ambulation in SMA 3. The median time to develop orthopedic deformities was 4.5, 5.2, and 10.1 years in SMAs 1c, 2, and 3, respectively (p < 0.0001), with a possible trend of better preservation of joint function for patients under regular rehabilitation (p = 0.8668).ConclusionOur study elucidated insight into the comprehensive management and profile of different types of SMA patients in China, providing a clinical basis for assessing the efficacy of new therapies.
- Published
- 2022
- Full Text
- View/download PDF
7. A case report of an intermediate phenotype between congenital myasthenic syndrome and D-2- and L-2-hydroxyglutaric aciduria due to novel SLC25A1 variants
- Author
-
Wenhui Li, Min Zhang, Linmei Zhang, Yiyun Shi, Lei Zhao, Bingbing Wu, Xihua Li, and Shuizhen Zhou
- Subjects
Congenital myasthenic syndrome ,SLC25A1 ,D-2- and L-2-hydroxyglutaric aciduria ,Phenotype ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Background Variants in the SLC25A1 gene are associated with a severe neurometabolic disease, D-2- and L-2-hydroxyglutaric aciduria (D/L-2-HGA). A report in 2014 presented the first account of congenital myasthenic syndrome (CMS) with mild intellectual disability (ID) caused by SLC25A1. To date, only two missense variants in SLC25A1 have been linked to CMS. Case presentations A Chinese boy presented fatigable muscular weakness, myasthenic crisis, epilepsy and developmental delay along with mild elevation of urinary 2-ketoglutarate (2-KG) and lactic acid levels. He showed a partial response to pyridostigmine. Genetic analysis using trio whole-exome sequencing (WES), Sanger sequencing, and cosegregation analyses revealed two novel pathogenic variants of SLC25A1 (c.628C > T, p.R210X; c.145G > A, p.V49M). Conclusions We report a boy who carries novel compound heterozygous variants of SLC25A1 and presents a phenotype intermediate between CMS and D/L-2-HGA. This case expands the range of known phenotypes and genotypes associated with SLC25A1.
- Published
- 2020
- Full Text
- View/download PDF
8. Characteristics of Mesoscale Eddies in the Vicinity of the Kuroshio: Statistics from Satellite Altimeter Observations and OFES Model Data
- Author
-
Yiyun Shi, Xiaohui Liu, Tongya Liu, and Dake Chen
- Subjects
mesoscale eddies ,Kuroshio ,eddy-mean-flow interaction ,satellite altimeter OFES model data ,Naval architecture. Shipbuilding. Marine engineering ,VM1-989 ,Oceanography ,GC1-1581 - Abstract
Mesoscale eddies propagate westward in the northwestern Pacific Ocean and interact with the Kuroshio in the vicinity of the western boundary of the ocean. However, the processes affecting the eddy properties and the detailed structure of the eddies when they encounter the Kuroshio remain unclear. In this study, we analyze the statistics of the eddy properties around the Kuroshio using 25 years of satellite altimeter data and the eddy-resolving OFES model product. The spatial compositions of the eddies in the northwestern Pacific show that, as the eddies propagate westward, their radius and amplitude decrease sharply when they approach the Kuroshio region. The radius, amplitude, and kinetic energy of the eddies reaching the Kuroshio region decay much faster during their lifespan compared with the eddies in the interior of the Pacific Ocean. Furthermore, the three-dimensional structure of the eddies obtained from the OFES model data shows that the maximum temperature anomalies in the cyclonic and anticyclonic eddies occur at ~300 m, and the maximum depth reduces as a result of the interaction between the eddies and the main Kuroshio current.
- Published
- 2022
- Full Text
- View/download PDF
9. Myotonia Congenita: Clinical Characteristic and Mutation Spectrum of CLCN1 in Chinese Patients
- Author
-
Chaoping Hu, Yiyun Shi, Lei Zhao, Shuizhen Zhou, and Xihua Li
- Subjects
myotonia congenita ,CLCN1 gene ,mutations ,genotype ,phenotype ,Pediatrics ,RJ1-570 - Abstract
Background:CLCN1-related myotonia congenita (MC) is one of the most common forms of non-dystrophic myotonia, in which muscle relaxation is delayed after voluntary or evoked contraction. However, there is limited data of clinical and molecular spectrum of MC patients in China.Patients and Methods: Five patients with myotonia congenita due to mutations in CLCN1 gene were enrolled, which were identified through trio-whole-exome sequencing or panel-based next-generation sequencing test. The clinical presentation, laboratory data, electrophysiological tests, muscular pathology feature, and genetic results were collected and reviewed. We also searched all previously reported cases of MC patients with genetic diagnosis in Chinese populations, and their data were reviewed.Results: The median onset age of five patients was 3.0 years old, ranging from 1.0 to 5.0 years old, while the median age of admit was 5.0 years old, ranging from 3.5 to 8.8 years old. Five patients complained of muscle stiffness when rising from chairs or starting to climb stairs (5/5, 100.0%), four patients complained of delayed relaxation of their hands after forceful grip (4/5, 80.0%), all of which improved with exercise (warm-up phenomenon) (5/5, 100%). Electromyogram was conducted in five patients, which all revealed myotonic change (100%). Genetic tests revealed nine potential disease-causing variants in CLCN1 gene, including two novel variants: c.962T>A (p.V321E) and c.1250A>T (p.E417V). Literature review showed that 43 MC Chinese patients with genetic diagnosis have been reported till now (including our five patients). Forty-seven variants in CLCN1 gene were found, which consisted of 33 missense variants, 6 nonsense variants, 5 frame-shift variants, and 3 splicing variants. Variants in exon 8, 15, 12, and 16 were most prevalent, while the most common variants were c.892G>A (p.A298T) (n = 9), c.139C>T (p.R47W) (n = 3), c.1205C>T(p.A402V) (n = 3), c.1657A>T (p.I553F) (n = 3), c.1679T>C (p.M560T) (n = 3), c.350A>G (p.D117G) (n = 2), c.762C>G (p.C254W) (n = 2), c.782A>G (P.Y261C) (n = 2), and c.1277C>A (p.T426N) (n = 2).Conclusion: Our results reported five CLCN1-related MC patients, which expanded the clinical and genetic spectrum of MC patients in China. Based on literature review, 43MC Chinese patients with genetic diagnosis have been reported till now, and variants in exon eight were most prevalent in Chinese MC patients while c.892G>A (p.A298T) was probably a founder mutation.
- Published
- 2021
- Full Text
- View/download PDF
10. When the Good Syndrome Goes Bad: A Systematic Literature Review
- Author
-
Yiyun Shi and Chen Wang
- Subjects
Good syndrome ,immunodeficiency ,prognosis ,clinical subgroups ,infections ,Immunologic diseases. Allergy ,RC581-607 - Abstract
BackgroundGood syndrome is a rare adult-onset immunodeficiency characterized by thymoma and hypogammaglobulinemia. Its clinical manifestations are highly heterogeneous, ranging from various infections to autoimmunity.ObjectiveThis study was to summarize patient characteristics, identify prognostic factors and define clinical subgroups of Good syndrome.MethodsA systematic literature review was conducted to include patients with Good syndrome identified in PubMed, Embase and Cochrane databases between January 2010 and November 2020. Logistic and Cox regressions were used to identify prognostic factors impacting outcomes. Clinical subgroups were defined by multiple correspondence analysis and unsupervised hierarchical clustering. A decision tree was constructed to characterize the subgroup placement of cases.ResultsOf 162 patients included in the current study, the median age at diagnosis was 58 years and 51% were male. Type AB was the most common histological subtype of thymoma, and infections as well as concurrent autoimmune disorders were identified in 92.6% and 51.2% patients, respectively. Laboratory workup showed typical findings of combined immunodeficiency. Thymoma status (odds ratio [OR] 4.157, confidence interval [CI] 1.219-14.177, p = 0.023), infections related to cellular immunity defects (OR 3.324, 95% CI 1.100-10.046, p = 0.033), infections of sinopulmonary tract (OR 14.351, 95% CI 2.525-81.576, p = 0.003), central nerve system (OR 6.403, 95% CI 1.205-34.027, p = 0.029) as well as bloodstream (OR 6.917, 95% CI 1.519-31.505, p = 0.012) were independent prognostic factors. The 10-year overall survival was 53.7%. Cluster analysis revealed three clinical subgroups with distinct characteristics and prognosis (cluster 1, infections related to cellular immunity defects; cluster 2, infections related to other immunity defects; cluster 3, infections related to humoral and phagocytic immunity defects). A decision tree using infection types (related to humoral and cellular immunity defects) could place patients into corresponding clusters with an overall correct prediction of 72.2%.ConclusionsInfection type and site were the main prognostic factors impacting survival of patients with Good syndrome. We identified three subgroups within Good syndrome associated with distinct clinical features, which may facilitate the study of underlying pathogenesis as well as development of targeted therapy.
- Published
- 2021
- Full Text
- View/download PDF
11. Predictors of severity and mortality among patients hospitalized with COVID-19 in Rhode Island.
- Author
-
Aakriti Pandita, Fizza S Gillani, Yiyun Shi, Anna Hardesty, Meghan McCarthy, Jad Aridi, Dimitrios Farmakiotis, Silvia S Chiang, and Curt G Beckwith
- Subjects
Medicine ,Science - Abstract
BackgroundIn order for healthcare systems to prepare for future waves of COVID-19, an in-depth understanding of clinical predictors is essential for efficient triage of hospitalized patients.MethodsWe performed a retrospective cohort study of 259 patients admitted to our hospitals in Rhode Island to examine differences in baseline characteristics (demographics and comorbidities) as well as presenting symptoms, signs, labs, and imaging findings that predicted disease progression and in-hospital mortality.ResultsPatients with severe COVID-19 were more likely to be older (p = 0.02), Black (47.2% vs. 32.0%, p = 0.04), admitted from a nursing facility (33.0% vs. 17.9%, p = 0.006), have diabetes (53.9% vs. 30.4%, pConclusionsCertain patient characteristics and clinical features can help clinicians with early identification and triage of high-risk patients during subsequent waves of COVID-19.
- Published
- 2021
- Full Text
- View/download PDF
12. Clinical Profile and Outcome of Pediatric Mitochondrial Myopathy in China
- Author
-
Chaoping Hu, Xihua Li, Lei Zhao, Yiyun Shi, Shuizhen Zhou, and Yi Wang
- Subjects
mitochondrial myopathy ,gene mutation ,treatment ,cytochrome-c oxidase ,pathology ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Introduction: Mitochondrial myopathy in children has notable clinical and genetic heterogeneity, but detailed data is lacking.Patients and Methods: In this study, we retrospectively reviewed the clinical presentation, laboratory investigation, genetic and histopathological characteristics, and follow-ups of 21 pediatric mitochondrial myopathy cases from China.Results: Twenty-four patients suspected with mitochondrial myopathy were enrolled initially and 21 were genetically identified. Fourteen patients were found to harbor mitochondrial DNA point mutations (14/21, 66.7%), including m.3243A>G (9/15, 60%), m.3303C>T (2/15, 13.3%), m.3302A>G (1/15, 6.7%), m.3250T>C (1/15, 6.7%), m.3251A>G (1/15, 6.7%), of whom 12 patients presented with progressive proximal mitochondrial myopathy (12/14, 85.7%). Three patients revealed large-scale deletion in blood or muscle tissue (3/21, 14.3%), presenting with Kearns-Sayer syndrome (1/3, 33.3%) or chronic progressive external ophthalmoplegia (2/3, 66.7%). Four patients were found to harbor pathogenic nuclear gene variants (4/21, 19.0%), including five variants in TK2 gene and two variants in SURF1 gene. During the follow-ups up to 7 years, 10 patients developed cardiomyopathy (10/21, 47.6%), 13 patients occurred at least once hypercapnic respiratory failure (13/21, 61.9%), six experienced recurrent respiratory failure and intubation (6/21, 28.6%), eight patients failed to survive (8/21, 38.1%). With nocturnal non-invasive ventilation of BiPAP, three patients recovered from respiratory failure, and led a relative stable and functional life (3/21, 14.3%).Conclusion: Mitochondrial myopathy in children has great clinical, pathological, and genetical heterogeneity. Progressive proximal myopathy is most prevalent. Mitochondrial DNA point mutations are most common. And respiratory failure is a critical risk factor of poor prognosis.
- Published
- 2020
- Full Text
- View/download PDF
13. Rice extra‐large G proteins play pivotal roles in controlling disease resistance and yield‐related traits
- Author
-
Yan Zhao, Yiyun Shi, Guanghuai Jiang, Yufeng Wu, Miaomiao Ma, Xiaojuan Zhang, Xiangxiu Liang, and Jian‐Min Zhou
- Subjects
Magnaporthe ,Plant Breeding ,Xanthomonas ,GTP-Binding Proteins ,Gene Expression Regulation, Plant ,Physiology ,Oryza ,Plant Science ,Disease Resistance ,Plant Diseases ,Plant Proteins - Abstract
To better explore the potential of rice extra-large G (XLG) proteins in future breeding, we characterised the function of OsXLG1, OsXLG2 and OsXLG3 in disease resistance. Loss-of-function Osxlg2 and Osxlg3 mutants showed reduced resistance to the fungal pathogen Magnaporthe oryzae, whereas Osxlg1 mutants were specifically compromised in resistance to the bacterial pathogen Xanthomonas oryzae pv oryzae. Consistent with their effects on rice blast resistance, mutations in OsXLG2 and OsXLG3 caused greater defects than did mutations in OsXLG1 for chitin-induced defence responses. All three OsXLGs interacted with components of a surface immune receptor complex composed of OsCERK1, OsRLCK176 and OsRLCK185. Further characterisation of yield-related traits showed that the Osxlg3 mutants displayed reduced plant height, panicle length and 1000grain weight, whereas Osxlg1 mutants exhibited increased plant height, panicle length and 1000-grain weight. Together the study shows the differential contributions of the three OsXLG proteins to disease resistance to fungal and bacterial pathogens, their yield-related traits and provides insights for future improvement of rice production.
- Published
- 2022
14. Non-infectious gastrointestinal manifestations of Good syndrome
- Author
-
Chen Wang and Yiyun Shi
- Subjects
Internal Medicine - Published
- 2023
15. Low-Dose Valganciclovir Prophylaxis Is Safe and Cost-Saving in CMV-Seropositive Kidney Transplant Recipients
- Author
-
Ralph Rogers, Krista Mecadon, Basma Merhi, Adena J. Osband, Kendra Vieira, Reginald Y. Gohh, Dimitrios Farmakiotis, Paul E. Morrissey, Alexis Hope Lerner, George Bayliss, and Yiyun Shi
- Subjects
medicine.medical_specialty ,Basiliximab ,Neutropenia ,medicine.disease_cause ,Antiviral Agents ,Internal medicine ,Humans ,Valganciclovir ,Medicine ,Dosing ,Ganciclovir ,Retrospective Studies ,Transplantation ,business.industry ,Incidence (epidemiology) ,virus diseases ,Breakthrough infection ,medicine.disease ,Kidney Transplantation ,Transplant Recipients ,Cost savings ,BK virus ,Cytomegalovirus Infections ,business ,medicine.drug - Abstract
Introduction: Observational studies suggest that low-dose valganciclovir prophylaxis (450 mg daily for normal renal function) is as effective as and perhaps safer than standard-dose valganciclovir (900 mg daily) in preventing CMV infection among kidney transplant recipients. However, this practice is not supported by current guidelines due to concerns for breakthrough infection from resistant CMV, mainly in high-risk CMV donor-seropositive/recipient-seronegative kidney transplant recipients. Standard-dose valganciclovir is costly and possibly associated with higher incidence of neutropenia and BKV DNAemia. Our institution adopted low-dose valganciclovir prophylaxis for intermediate-risk (seropositive) kidney transplant recipients in January 2018. Research Question: To analyze the efficacy (CMV DNAemia), safety (BK virus DNAemia, neutropenia, graft loss, and death), and cost savings associated with this change. Design: We retrospectively compared the above outcomes between CMV-seropositive kidney transplant recipients who received low-dose and standard-dose valganciclovir, transplanted within our institution, between 1/19/2014 and 7/15/2019, using propensity score-adjusted competing risk analyses. We also compared cost estimates between the two dosing regimens, for 3 months of prophylaxis, and for different percentage of patient-weeks with normal renal function, using the current average wholesale price of valganciclovir. Results: We studied 179 CMV-seropositive kidney transplant recipients, of whom 55 received low-dose and 124 standard-dose valganciclovir. The majority received nonlymphocyte depleting induction (basiliximab). Low-dose valganciclovir was at least as effective and safe as, and more cost-saving than standard-dose valganciclovir. Conclusion: This single-center study contributes to mounting evidence for future guidelines to be adjusted in favor of low-dose valganciclovir prophylaxis in CMV-seropositive kidney transplant recipients.
- Published
- 2021
16. Neuroimaging characteristics and genetic correlations in pediatric mitochondrial disorders: a cohort study from China
- Author
-
Chaoping Hu, Jin Shen, Yiyun Shi, Lifei Yu, Xihua Li, Lei Zhao, Shuizhen Zhou, and Yi Wang
- Abstract
Background Mitochondrial disorders present with high clinical, genetic and neuroimaging heterogeneity. The spectrum of neuroimaging characteristics expanded fast based on the expanding of molecular etiologies. Methods In this study, we retrospectively recruited a cohort of primary pediatric mitochondrial disorder patients with confirmed genetic diagnosis. The clinical presentation, brain CT/MRI data, genetic results and biological dysfunction were collected and reviewed.Results Seventy-seven patients were enrolled, including 54 patients with mtDNA (70.1%) and 23 patients with nDNA mutations (29.9%). The most common MRI findings were deep nuclei lesion (65.1%), brain atrophy (50.0%), cortical and subcortical white matter lesion (36.4%), deep white matter lesion (30.3%), and diffused cerebral atrophy (10.6%). Overall lesion in diffused deep white matter was more common in nDNA-mutated patients (p=0.0365). Deep nuclei lesion was observed most frequently in patients with mutations in MT-ATP6, MT-ND6, and NDUFAF5 genes, while cortical/subcortical white matter lesion was common in patients with MT-TL1 gene, mtDNA large-scale deletion, or NDUFAF5 gene defects. The most common MRI finding in patients with m.3243A>G mutation was simultaneous cortical/subcortical white matter and deep nuclei involvement (9/24, 37.5%), followed by cortical grey/subcortical white matter lesion (7/24, 29.2%), unilateral or bilateral lesion in deep nuclei (5/24, 20.8%), whereas some patients showed normal MRI (3/24, 12.5%). The most common MRI change in POLG-mutated patients was brain atrophy (4/4,100%), lesion in deep nuclei (3/4, 75%), deep white matter (2/4, 50%) and cortical grey/subcortical white matter lesion (1/4,25%). Heatmap showed multi deep nuclei lesion was more common in patients with OXPHOS subunits defects; cortical grey and subcortical white matter lesion was more common in dysfunction of mtDNA maintenance, expression and translation; and lesion in deep white matter was more common in patients with dysfunction of metabolism of cofactors. Discussion Neuroimaging findings in pediatric mitochondrial disorder patients are variable. The most common patterns are deep nuclei lesion, brain atrophy, cortical grey/subcortical white matter lesion, deep white matter lesion, and cerebellar atrophy. There are some correlations between brain MRI results of patients and their genetic defects, as well as biological dysfunction.
- Published
- 2022
17. Safety and efficacy of risdiplam in patients with type 1 spinal muscular atrophy (FIREFISH part 2): secondary analyses from an open-label trial
- Author
-
Riccardo Masson, Maria Mazurkiewicz-Bełdzińska, Kristy Rose, Laurent Servais, Hui Xiong, Edmar Zanoteli, Giovanni Baranello, Claudio Bruno, John W Day, Nicolas Deconinck, Andrea Klein, Eugenio Mercuri, Dmitry Vlodavets, Yi Wang, Angela Dodman, Muna El-Khairi, Ksenija Gorni, Birgit Jaber, Heidemarie Kletzl, Eleni Gaki, Paulo Fontoura, Basil T Darras, Joseph J Volpe, John Posner, Ulrich Kellner, Rosaline Quinlivan, Marianne Gerber, Omar Khwaja, Renata S Scalco, Timothy Seabrook, Armin Koch, Irina Balikova, Inge Joniau, Geraldine Accou, Valentine Tahon, Sylvia Wittevrongel, Elke De Vos, Rodrigo de Holanda Mendonça, Ciro Matsui Jr, Ana Letícia Fornazieri Darcie, Cleide Machado, Maria Kiyoko Oyamada, Joyce Martini, Graziela Polido, Juliana Rodrigues Iannicelli, Juliana Caires de Oliveira Achili Ferreira, Chaoping Hu, Xiaomei Zhu, Chen Qian, Li Shen, Hui Li, Yiyun Shi, Shuizhen Zhou, Ying Xiao, Zhenxuan Zhou, Sujuan Wang, Tian Sang, Cuijie Wei, Hui Dong, Yiwen Cao, Jing Wen, Wenzhu Li, Lun Qin, Nina Barisic, Ivan Celovec, Martina Galiot Delic, Petra Kristina Ivkic, Nenad Vukojevic, Ivana Kern, Boris Najdanovic, Marin Skugor, Josipa Tomas, Odile Boespflug-Tanguy, Silvana De Lucia, Andrea Seferian, Emmanuel Barreau, Nabila Mnafek, Helene Peche, Allison Grange, Diem Trang Nguyen, Darko Milascevic, Shotaro Tachibana, Emanuela Pagliano, Stefania Bianchi Marzoli, Diletta Santarsiero, Myriam Garcia Sierra, Gemma Tremolada, Maria Teresa Arnoldi, Marta Vigano, Claudia Dosi, Riccardo Zanin, Veronica Schembri, Noemi Brolatti, Giuseppe Rao, Elisa Tassara, Simone Morando, Paola Tacchetti, Marina Pedemonte, Enrico Priolo, Lorenza Sposetti, Giacomo Pietro Comi, Alessandra Govoni, Silvia Gabriella Osnaghi, Valeria Minorini, Francesca Abbati, Federica Fassini, Michaela Foa, Amalia Lopopolo, Marika Pane, Concetta Palermo, Maria Carmela Pera, Giulia Maria Amorelli, Costanza Barresi, Guglielmo D'Amico, Lorenzo Orazi, Giorgia Coratti, Daniela Leone, Antonaci Laura, Roberto De Sanctis, Beatrice Berti, Naoki Kimura, Yasuhiro Takeshima, Hideki Shimomura, Tomoko Lee, Fumi Gomi, Takanobu Morimatsu, Toru Furukawa, Urszula Stodolska-Koberda, Agnieszka Waskowska, Jagoda Kolendo, Agnieszka Sobierajska-Rek, Sandra Modrzejewska, Anna Lemska, Evgenia Melnik, Svetlana Artemyeva, Natalya Leppenen, Nataliya Yupatova, Anastasya Monakhova, Yulia Papina, Olga Shidlovsckaia, Elena Litvinova, Cornelia Enzmann, Elea Galiart, Konstantin Gugleta, Christine Wondrusch Haschke, Haluk Topaloglu, Ibrahim Oncel, Nesibe Eroglu Ertugrul, Bahadir Konuskan, Bora Eldem, Sibel Kadayifçilar, Ipek Alemdaroglu, Seher Sari, Neslihan Bilgin, Aynur Ayse Karaduman, Fatma Gokcem Yildiz Sarikaya, Robert J Graham, Partha Ghosh, David Casavant, Alexis Levine, Rachael Titus, Amanda Engelbrekt, Lucia Ambrosio, Anne Fulton, Anna Maria Baglieri, Courtney Dias, Elizabeth Maczek, Amy Pasternak, Shannon Beres, Tina Duong, Richard Gee, Sally Young, Masson, R., Mazurkiewicz-Beldzinska, M., Rose, K., Servais, L., Xiong, H., Zanoteli, E., Baranello, G., Bruno, C., Day, J. W., Deconinck, N., Klein, A., Mercuri, E., Vlodavets, D., Wang, Y., Dodman, A., El-Khairi, M., Gorni, K., Jaber, B., Kletzl, H., Gaki, E., Fontoura, P., Darras, B. T., Volpe, J. J., Posner, J., Kellner, U., Quinlivan, R., Gerber, M., Khwaja, O., Scalco, R. S., Seabrook, T., Koch, A., Balikova, I., Joniau, I., Accou, G., Tahon, V., Wittevrongel, S., De Vos, E., de Holanda Mendonca, R., Matsui Jr, C., Fornazieri Darcie, A. L., Machado, C., Kiyoko Oyamada, M., Martini, J., Polido, G., Rodrigues Iannicelli, J., Caires de Oliveira Achili Ferreira, J., Hu, C., Zhu, X., Qian, C., Shen, L., Li, H., Shi, Y., Zhou, S., Xiao, Y., Zhou, Z., Wang, S., Sang, T., Wei, C., Dong, H., Cao, Y., Wen, J., Li, W., Qin, L., Barisic, N., Celovec, I., Galiot Delic, M., Ivkic, P. K., Vukojevic, N., Kern, I., Najdanovic, B., Skugor, M., Tomas, J., Boespflug-Tanguy, O., De Lucia, S., Seferian, A., Barreau, E., Mnafek, N., Peche, H., Grange, A., Trang Nguyen, D., Milascevic, D., Tachibana, S., Pagliano, E., Bianchi Marzoli, S., Santarsiero, D., Garcia Sierra, M., Tremolada, G., Arnoldi, M. T., Vigano, M., Dosi, C., Zanin, R., Schembri, V., Brolatti, N., Rao, G., Tassara, E., Morando, S., Tacchetti, P., Pedemonte, M., Priolo, E., Sposetti, L., Comi, G. P., Govoni, A., Osnaghi, S. G., Minorini, V., Abbati, F., Fassini, F., Foa, M., Lopopolo, A., Pane, M., Palermo, C., Pera, M. C., Amorelli, G. M., Barresi, C., D'Amico, G., Orazi, L., Coratti, G., Leone, D., Laura, A., De Sanctis, R., Berti, B., Kimura, N., Takeshima, Y., Shimomura, H., Lee, T., Gomi, F., Morimatsu, T., Furukawa, T., Stodolska-Koberda, U., Waskowska, A., Kolendo, J., Sobierajska-Rek, A., Modrzejewska, S., Lemska, A., Melnik, E., Artemyeva, S., Leppenen, N., Yupatova, N., Monakhova, A., Papina, Y., Shidlovsckaia, O., Litvinova, E., Enzmann, C., Galiart, E., Gugleta, K., Wondrusch Haschke, C., Topaloglu, H., Oncel, I., Ertugrul, N. E., Konuskan, B., Eldem, B., Kadayifcilar, S., Alemdaroglu, I., Sari, S., Bilgin, N., Karaduman, A. A., Sarikaya, F. G. Y., Graham, R. J., Ghosh, P., Casavant, D., Levine, A., Titus, R., Engelbrekt, A., Ambrosio, L., Fulton, A., Baglieri, A. M., Dias, C., Maczek, E., Pasternak, A., Beres, S., Duong, T., Gee, R., and Young, S.
- Subjects
Muscular Atrophy, Spinal ,Settore MED/26 - NEUROLOGIA ,Pyrimidines ,Settore MED/39 - NEUROPSICHIATRIA INFANTILE ,Settore MED/48 - SCIENZE INFERMIERISTICHE E TECNICHE NEURO-PSICHIATRICHE E RIABILITATIVE ,Humans ,Infant ,Neurology (clinical) ,Spinal Muscular Atrophies of Childhood ,Azo Compounds ,spinal muscular atrophy - Abstract
Background: Risdiplam is an orally administered therapy that modifies pre-mRNA splicing of the survival of motor neuron 2 (SMN2) gene and is approved for the treatment of spinal muscular atrophy. The FIREFISH study is investigating the safety and efficacy of risdiplam in treated infants with type 1 spinal muscular atrophy versus historical controls. The primary endpoint of part 2 of the FIREFISH study showed that infants with type 1 spinal muscular atrophy attained the ability to sit without support for at least 5 s after 12 months of treatment. Here, we report on the safety and efficacy of risdiplam in FIREFISH part 2 over 24 months of treatment. Methods: FIREFISH is an ongoing, multicentre, open-label, two-part study. In FIREFISH part 2, eligible infants (aged 1-7 months at enrolment, with a genetically confirmed diagnosis of spinal muscular atrophy, and two SMN2 gene copies) were enrolled in 14 hospitals in ten countries across Europe, North America, South America, and Asia. Risdiplam was orally administered once daily at 0·2 mg/kg for infants between 5 months and 2 years of age; once an infant reached 2 years of age, the dose was increased to 0·25 mg/kg. Infants younger than 5 months started at 0·04 mg/kg (infants between 1 month and 3 months old) or 0·08 mg/kg (infants between 3 months and 5 months old), and this starting dose was adjusted to 0·2 mg/kg once pharmacokinetic data were available for each infant. The primary and secondary endpoints included in the statistical hierarchy and assessed at month 12 have been reported previously. Here we present the remainder of the secondary efficacy endpoints that were included in the statistical hierarchy at month 24: the ability to sit without support for at least 30 s, to stand alone, and to walk alone, as assessed by the Bayley Scales of Infant and Toddler Development, third edition gross motor subscale. These three endpoints were compared with a performance criterion of 5% that was defined based on the natural history of type 1 spinal muscular atrophy; the results were considered statistically significant if the lower limit of the two-sided 90% CI was above the 5% threshold. FIREFISH is registered with ClinicalTrials.gov, NCT02913482. Recruitment is closed; the 36-month extension period of the study is ongoing. Findings: Between March 13 and Nov 19, 2018, 41 infants were enrolled in FIREFISH part 2. After 24 months of treatment, 38 infants were ongoing in the study and 18 infants (44% [90% CI 31-58]) were able to sit without support for at least 30 s (p
- Published
- 2022
18. Hematological manifestations of Good syndrome
- Author
-
Chen Wang and Yiyun Shi
- Subjects
Cancer Research ,Pediatrics ,medicine.medical_specialty ,Text mining ,Oncology ,business.industry ,MEDLINE ,Medicine ,Hematology ,business - Published
- 2021
19. Myotonia Congenita: Clinical Characteristic and Mutation Spectrum of CLCN1 in Chinese Patients
- Author
-
Shuizhen Zhou, Lei Zhao, Yiyun Shi, Chaoping Hu, and Xihua Li
- Subjects
medicine.medical_specialty ,phenotype ,genotype ,medicine.disease_cause ,Pediatrics ,Gastroenterology ,RJ1-570 ,Exon ,Internal medicine ,Genotype ,medicine ,Missense mutation ,Original Research ,CLCN1 ,Mutation ,biology ,Myotonia congenita ,business.industry ,CLCN1 gene ,mutations ,medicine.disease ,Myotonia ,Muscle relaxation ,Pediatrics, Perinatology and Child Health ,biology.protein ,business ,myotonia congenita - Abstract
Background:CLCN1-related myotonia congenita (MC) is one of the most common forms of non-dystrophic myotonia, in which muscle relaxation is delayed after voluntary or evoked contraction. However, there is limited data of clinical and molecular spectrum of MC patients in China.Patients and Methods: Five patients with myotonia congenita due to mutations in CLCN1 gene were enrolled, which were identified through trio-whole-exome sequencing or panel-based next-generation sequencing test. The clinical presentation, laboratory data, electrophysiological tests, muscular pathology feature, and genetic results were collected and reviewed. We also searched all previously reported cases of MC patients with genetic diagnosis in Chinese populations, and their data were reviewed.Results: The median onset age of five patients was 3.0 years old, ranging from 1.0 to 5.0 years old, while the median age of admit was 5.0 years old, ranging from 3.5 to 8.8 years old. Five patients complained of muscle stiffness when rising from chairs or starting to climb stairs (5/5, 100.0%), four patients complained of delayed relaxation of their hands after forceful grip (4/5, 80.0%), all of which improved with exercise (warm-up phenomenon) (5/5, 100%). Electromyogram was conducted in five patients, which all revealed myotonic change (100%). Genetic tests revealed nine potential disease-causing variants in CLCN1 gene, including two novel variants: c.962T>A (p.V321E) and c.1250A>T (p.E417V). Literature review showed that 43 MC Chinese patients with genetic diagnosis have been reported till now (including our five patients). Forty-seven variants in CLCN1 gene were found, which consisted of 33 missense variants, 6 nonsense variants, 5 frame-shift variants, and 3 splicing variants. Variants in exon 8, 15, 12, and 16 were most prevalent, while the most common variants were c.892G>A (p.A298T) (n = 9), c.139C>T (p.R47W) (n = 3), c.1205C>T(p.A402V) (n = 3), c.1657A>T (p.I553F) (n = 3), c.1679T>C (p.M560T) (n = 3), c.350A>G (p.D117G) (n = 2), c.762C>G (p.C254W) (n = 2), c.782A>G (P.Y261C) (n = 2), and c.1277C>A (p.T426N) (n = 2).Conclusion: Our results reported five CLCN1-related MC patients, which expanded the clinical and genetic spectrum of MC patients in China. Based on literature review, 43MC Chinese patients with genetic diagnosis have been reported till now, and variants in exon eight were most prevalent in Chinese MC patients while c.892G>A (p.A298T) was probably a founder mutation.
- Published
- 2021
20. Coronavirus Disease 2019 in Kidney Transplant Recipients: Single-Center Experience and Case-Control Study
- Author
-
Adena J. Osband, Kendra Vieira, Ralph Rogers, Christopher Cosgrove, George Bayliss, Jad Aridi, Anna Hardesty, Curt G. Beckwith, Reginald Y. Gohh, Basma Merhi, Aakriti Pandita, Yiyun Shi, Paul E. Morrissey, and Dimitrios Farmakiotis
- Subjects
Adult ,Graft Rejection ,Male ,medicine.medical_specialty ,medicine.medical_treatment ,Secondary infection ,030230 surgery ,Single Center ,Antiviral Agents ,Tacrolimus ,Article ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Case fatality rate ,medicine ,Humans ,Pandemics ,Kidney transplantation ,Aged ,Sirolimus ,Transplantation ,business.industry ,SARS-CoV-2 ,TOR Serine-Threonine Kinases ,Case-control study ,COVID-19 ,Immunosuppression ,Length of Stay ,Middle Aged ,medicine.disease ,Kidney Transplantation ,COVID-19 Drug Treatment ,Calcineurin ,Treatment Outcome ,Case-Control Studies ,Kidney Failure, Chronic ,030211 gastroenterology & hepatology ,Surgery ,Female ,Hemodialysis ,business ,Immunosuppressive Agents - Abstract
Background Kidney transplant recipients (KTR) are considered high-risk for morbidity and mortality from coronavirus disease 2019 (COVID-19). However, some studies did not show worse outcomes compared to non-transplant patients and there is little data about immunosuppressant drug levels and secondary infections in KTR with COVID-19. Herein, we describe our single-center experience with COVID-19 in KTR. Methods We captured KTR diagnosed with COVID-19 between March 1, 2020 and May 18, 2020. After exclusion of KTR on hemodialysis and off immunosuppression, we compared the clinical course of COVID-19 between hospitalized KTR and non-transplant patients, matched by age and sex (controls). Results Eleven KTR were hospitalized and matched with 44 controls. One KTR and 4 controls died (case fatality rate: 9.1%). There were no significant differences in length of stay or clinical outcomes between KTR and controls. Tacrolimus or sirolimus levels were >10 ng/mL in 6 out of 9 KTR (67%). Bacterial infections were more frequent in KTR (36.3%), compared with controls (6.8%, P = .02). Conclusions In our small case series, unlike earlier reports from the pandemic epicenters, the clinical outcomes of KTR with COVID-19 were comparable to those of non-transplant patients. Calcineurin or mammalian target of rapamycin inhibitor (mTOR) levels were high. Bacterial infections were more common in KTR, compared with controls.
- Published
- 2021
21. Predictors of severity and mortality among patients hospitalized with COVID-19 in Rhode Island
- Author
-
Fizza S. Gillani, Yiyun Shi, Aakriti Pandita, Meghan McCarthy, Curt G. Beckwith, Dimitrios Farmakiotis, Anna Hardesty, Jad Aridi, and Silvia S. Chiang
- Subjects
Male ,Viral Diseases ,Pulmonology ,Blood Pressure ,Comorbidity ,030204 cardiovascular system & hematology ,Severity of Illness Index ,Vascular Medicine ,0302 clinical medicine ,Medical Conditions ,Endocrinology ,Risk Factors ,Medicine and Health Sciences ,030212 general & internal medicine ,Hospital Mortality ,Hypoxia ,Tachypnea ,COPD ,Multidisciplinary ,Radiology and Imaging ,Hematology ,Middle Aged ,Hospitalization ,Infectious Diseases ,Medicine ,Female ,medicine.symptom ,Hypotension ,Research Article ,medicine.medical_specialty ,Endocrine Disorders ,Chronic Obstructive Pulmonary Disease ,Science ,03 medical and health sciences ,Diabetes mellitus ,Internal medicine ,Severity of illness ,medicine ,Diabetes Mellitus ,Humans ,Epidemics ,Aged ,Retrospective Studies ,business.industry ,SARS-CoV-2 ,COVID-19 ,Rhode Island ,Biology and Life Sciences ,Retrospective cohort study ,Covid 19 ,Odds ratio ,Cell Biology ,medicine.disease ,Confidence interval ,Health Care ,Health Care Facilities ,Metabolic Disorders ,Triage ,business - Abstract
Background In order for healthcare systems to prepare for future waves of COVID-19, an in-depth understanding of clinical predictors is essential for efficient triage of hospitalized patients. Methods We performed a retrospective cohort study of 259 patients admitted to our hospitals in Rhode Island to examine differences in baseline characteristics (demographics and comorbidities) as well as presenting symptoms, signs, labs, and imaging findings that predicted disease progression and in-hospital mortality. Results Patients with severe COVID-19 were more likely to be older (p = 0.02), Black (47.2% vs. 32.0%, p = 0.04), admitted from a nursing facility (33.0% vs. 17.9%, p = 0.006), have diabetes (53.9% vs. 30.4%, p Conclusions Certain patient characteristics and clinical features can help clinicians with early identification and triage of high-risk patients during subsequent waves of COVID-19.
- Published
- 2021
22. Risdiplam-Treated Infants with Type 1 Spinal Muscular Atrophy versus Historical Controls
- Author
-
Darras, Basil T, Masson, Riccardo, Mazurkiewicz-Bełdzińska, Maria, Rose, Kristy, Xiong, Hui, Zanoteli, Edmar, Baranello, Giovanni, Bruno, Claudio, Vlodavets, Dmitry, Wang, Yi, El-Khairi, Muna, Gerber, Marianne, Gorni, Ksenija, Khwaja, Omar, Kletzl, Heidemarie, Scalco, Renata S, Fontoura, Paulo, Servais, Laurent, Joseph J, Volpe, John, Posner, Armin, Koch, Ulrich, Kellner, Rosaline, Quinlivan, Nicolas, Deconinck, Irina, Balikova, Patricia, Delbeke, Inge, Joniau, Valentine, Tahon, Sylvia, Wittevrongel, Elke De Vos, Rodrigo de Holanda Mendonça, Ciro Matsui Jr, Ana Letícia Fornazieri Darcie, Cleide, Machado, Maria Kiyoko Oyamada, Daniel de Souza Costa, Joyce, Martini, Graziela, Polido, Juliana Rodrigues Iannicelli, Juliana Caires de Oliveira Achili Ferreira, Chaoping, Hu, Yiyun, Shi, Shuizhen, Zhou, Xiaomei, Zhu, Chen, Qian, Shen, Li, Ying, Xiao, Zhenxuan, Zhou, Hui, Li, Sujuan, Wang, Tian, Sang, Cuijie, Wei, Jing, Wen, Yiwen, Cao, Wenzhu, Li, Lun, Qin, Nina, Barisic, Ivan, Celovec, Martina, Martina, Galiot, Delic, Petra Kristina Ivkić, Nenad, Vukojević, Ivana, Kern, Boris, Najdanovic, Marin, Skugor, Odile, Boespflug-Tanguy, Teresa, Gidaro, Andrea, Seferian, Emmanuel, Barreau, Elodie Da Cunha, Céline, Lambotin, Nabila, Mnafek, Helene, Peche, Stephanie, Gilabert, Allison, Grange, Charlotte, Lilien, Darko, Milascevic, Ariadna, Perticari, Shotaro, Tachibana, Emanuela, Pagliano, Stefania Bianchi Marzoli, Diletta, Santarsiero, Myriam Garcia Sierra, Gemma, Tremolada, Maria Teresa Arnoldi, Marta, Vigano, Riccardo, Zanin, Noemi, Brolatti, Marina, Pedemonte, Enrico, Priolo, Giuseppe, Rao, Enrica, Spaletra, Lorenza, Sposetti, Elisa, Tassara, Simone, Morando, Paola, Tacchetti, Giacomo Pietro Comi, Alessandra, Govoni, Silvia Gabriella Osnaghi, Valeria, Minorini, Francesca, Abbati, Federica, Fassini, Michaela, Foa, Amalia, Lopopolo, Elisa, Minuti, Mercuri, Eugenio Maria, Pane, Marika, Concetta, Palermo, Pera, Maria Carmela, Amorelli, Giulia Maria, Costanza, Barresi, Gugliemo, D'Amico, Orazi, Lorenzo, Coratti, Giorgia, De Sanctis, Roberto, Yasuhiro, Takeshima, Fumi, Gomi, Naoki, Kimura, Takanobu, Morimatsu, Mana, Okamoto, Toru, Furukawa, Mateusz, Koberda, Natalia, Kubiak, Urszula, Stodolska-Koberda, Agnieszka, Waśkowska, Jagoda, Kolendo, Agnieszka, Sobierajska-Rek, Svetlana, Artemyeva, Evgenia, Melnik, Natalya, Leppenen, Nataliya, Yupatova, Elena, Litvinova, Anastasya, Monakhova, Yulia, Papina, Olga, Shidlovsckaia, Andrea, Klein, Cornelia, Enzmann, Elea, Galiart, Konstantin, Gugleta, Patricia, Siems, Verena, Kreiliger, Christine Wondrusch Haschke, Haluk, Topaloglu, Ibrahim, Oncel, Didem, Ardicli, Nesibe Eroglu Ertugrul, Hizal, Gharibzadeh, Ceren, Gunbey, Bahadir, Konuskan, Selen Serel Arslan, Elams Ebru Yalcin, Fatma Gokcem Yildiz Sarikaya, Bora, Eldem, Sibel, Kadayıfçılar, Ipek, Alemdaroglu, Aynur Ayse Karaduman, Oznur Tunca Yilmaz, Robert, J Graham, Partha, Ghosh, David, Casavant, Brian, Snyder, Alexis, Levine, Rachael, Titus, Amanda, Engelbrekt, Lucia, Ambrosio, Anne, Fulton, Anna Maria Baglieri, Courtney, Dias, Elizabeth, Maczek, Elizabeth, Mirek, Amy, Pasternak, John, W Day, Shannon, Beres, Tina, Duong, Richard, Gee, Sally, Young, Darras, Basil T, Masson, Riccardo, Mazurkiewicz-Bełdzińska, Maria, Rose, Kristy, Xiong, Hui, Zanoteli, Edmar, Baranello, Giovanni, Bruno, Claudio, Vlodavets, Dmitry, Wang, Yi, El-Khairi, Muna, Gerber, Marianne, Gorni, Ksenija, Khwaja, Omar, Kletzl, Heidemarie, Scalco, Renata S, Fontoura, Paulo, Servais, Laurent, and Ambrosio, Lucia
- Subjects
Male ,medicine.medical_specialty ,Neuromuscular disease ,Risdiplam ,Type 1 Spinal Muscular Atrophy ,treated infants ,historical controls ,MEDLINE ,Spinal Muscular Atrophies of Childhood ,Severity of Illness Index ,Text mining ,Settore MED/39 - NEUROPSICHIATRIA INFANTILE ,Internal medicine ,Severity of illness ,medicine ,Humans ,Progression-free survival ,610 Medicine & health ,business.industry ,Historically Controlled Study ,Infant ,General Medicine ,Spinal muscular atrophy ,SMA ,medicine.disease ,Progression-Free Survival ,Settore MED/26 - NEUROLOGIA ,Pyrimidines ,Neuromuscular Agents ,Motor Skills ,Female ,business ,Azo Compounds - Abstract
BACKGROUND Type 1 spinal muscular atrophy (SMA) is a progressive neuromuscular disease characterized by an onset at 6 months of age or younger, an inability to sit without support, and deficient levels of survival of motor neuron (SMN) protein. Risdiplam is an orally administered small molecule that modifies SMN2 pre-messenger RNA splicing and increases levels of functional SMN protein in blood. METHODS We conducted an open-label study of risdiplam in infants with type 1 SMA who were 1 to 7 months of age at enrollment. Part 1 of the study (published previously) determined the dose to be used in part 2 (reported here), which assessed the efficacy and safety of daily risdiplam as compared with no treatment in historical controls. The primary end point was the ability to sit without support for at least 5 seconds after 12 months of treatment. Key secondary end points were a score of 40 or higher on the Children's Hospital of Philadelphia Infant Test of Neuromuscular Disorders (CHOP-INTEND; range, 0 to 64, with higher scores indicating better motor function), an increase of at least 4 points from baseline in the CHOP-INTEND score, a motor-milestone response as measured by Section 2 of the Hammersmith Infant Neurological Examination (HINE-2), and survival without permanent ventilation. For the secondary end points, comparisons were made with the upper boundary of 90% confidence intervals for natural-history data from 40 infants with type 1 SMA. RESULTS A total of 41 infants were enrolled. After 12 months of treatment, 12 infants (29%) were able to sit without support for at least 5 seconds, a milestone not attained in this disorder. The percentages of infants in whom the key secondary end points were met as compared with the upper boundary of confidence intervals from historical controls were 56% as compared with 17% for a CHOP-INTEND score of 40 or higher, 90% as compared with 17% for an increase of at least 4 points from baseline in the CHOP-INTEND score, 78% as compared with 12% for a HINE-2 motor-milestone response, and 85% as compared with 42% for survival without permanent ventilation (P
- Published
- 2021
23. Risdiplam in Type 1 Spinal Muscular Atrophy
- Author
-
Baranello, Giovanni, Darras, Basil T, Day, John W, Deconinck, Nicolas, Klein, Andrea, Masson, Riccardo, Mercuri, Eugenio Maria, Rose, Kristy, El-Khairi, Muna, Gerber, Marianne, Gorni, Ksenija, Khwaja, Omar, Kletzl, Heidemarie, Scalco, Renata S, Seabrook, Timothy, Fontoura, Paulo, Servais, Laurent, FIREFISH Working Group: Joseph, J Volpe, John, Posner, Armin, Koch, Ulrich, Kellner, Rosaline, Quinlivan, Irina, Balikova, Patricia, Delbeke, Inge, Joniau, Valentine, Tahon, Sylvia, Wittevrongel, Elke De Vos, Edmar, Zanoteli, Rodrigo de Holanda Mendonça, Ciro Matsui Jr, Ana Letícia Fornazieri Darcie, Cleide, Machado, Maria Kiyoko Oyamada, Daniel de Souza Costa, Joyce, Martini, Graziela, Polido, Juliana Rodrigues Iannicelli, Juliana Caires de Oliveira Achili Ferreira, Wang, Yi, Chaoping, Hu, Yiyun, Shi, Shuizhen, Zhou, Xiaomei, Zhu, Chen, Qian, Shen, Li, Ying, Xiao, Zhenxuan, Zhou, Hui, Li, Sujuan, Wang, Hui, Xiong, Tian, Sang, Cuijie, Wei, Jing, Wen, Yiwen, Cao, Wenzhu, Li, Lun, Qin, Nina, Barisic, Ivan, Celovec, Martina Galiot Delic, Petra Kristina Ivkić, Nenad, Vukojević, Ivana, Kern, Boris, Najdanovic, Marin, Skugor, Odile, Boespflug-Tanguy, Teresa, Gidaro, Andrea, Seferian, Emmanuel, Barreau, Elodie Da Cunha, Céline, Lambotin, Nabila, Mnafek, Helene, Peche, Stephanie, Gilabert, Allison, Grange, Charlotte, Lilien, Darko, Milascevic, Ariadna, Perticari, Shotaro, Tachibana, Emanuela, Pagliano, Bianchi Marzoli, Stefania, Diletta, Santarsiero, Myriam Garcia Sierra, Gemma, Tremolada, Maria Teresa Arnoldi, Marta, Vigano, Riccardo, Zanin, Bissoli, Claudio Bruno, Noemi, Brolatti, Marina, Pedemonte, Enrico, Priolo, Giuseppe, Rao, Enrica, Spaletra, Lorenza, Sposetti, Elisa, Tassara, Simone, Morando, Paola, Tacchetti, Giacomo Pietro Comi, Alessandra, Govoni, Silvia Gabriella Osnaghi, Valeria, Minorini, Francesca, Abbati, Federica, Fassini, Michaela, Foa, Amalia, Lopopolo, Elisa, Minuti, Pane, Marika, Concetta, Palermo, Pera, Maria Carmela, Amorelli, Giulia Maria, Costanza, Barresi, Gugliemo, D'Amico, Orazi, Lorenzo, Coratti, Giorgia, De Sanctis, Roberto, Yasuhiro, Takeshima, Fumi, Gomi, Naoki, Kimura, Takanobu, Morimatsu, Mana, Okamoto, Toru, Furukawa, Maria, Mazurkiewicz-Bełdzińska, Mateusz, Koberda, Natalia, Kubiak, Urszula, Stodolska-Koberda, Agnieszka, Waśkowska, Jagoda, Kolendo, Agnieszka, Sobierajska-Rek, Dmitry, Vlodavets, Svetlana, Artemyeva, Evgenia, Melnik, Natalya, Leppenen, Nataliya, Yupatova, Elena, Litvinova, Anastasya, Monakhova, Yulia, Papina, Olga, Shidlovsckaia, Cornelia, Enzmann, Elea, Galiart, Konstantin, Gugleta, Patricia, Siems, Verena, Kreiliger, Christine Wondrusch Haschke, Haluk, Topaloglu, Ibrahim, Oncel, Didem, Ardicli, Nesibe Eroglu Ertugrul, Hizal, Gharibzadeh, Ceren, Gunbey, Bahadir, Konuskan, Selen Serel Arslan, Elams Ebru Yalcin, Fatma Gokcem Yildiz Sarikaya, Bora, Eldem, Sibel, Kadayıfçılar, Ipek, Alemdaroglu, Aynur Ayse Karaduman, Oznur Tunca Yilmaz, Lucia, Ambrosio, Anne, Fulton, Anna Maria Baglieri, Courtney, Dias, Elizabeth, Maczek, Elizabeth, Mirek, Amy, Pasternak, Shannon, Beres, Tina, Duong, Richard, Gee, Sally, Young, Giovanni, Baranello, Basil T, Darra, John W, Day, Nicolas, Deconinck, Andrea, Klein, Riccardo, Masson, Eugenio, Mercuri, Kristy, Rose, Muna, El-Khairi, Marianne, Gerber, Ksenija, Gorni, Omar, Khwaja, Heidemarie, Kletzl, Renata S, Scalco, Timothy, Seabrook, Paulo, Fontoura, Laurent, Servai, and Ambrosio, Lucia
- Subjects
Male ,Oral ,Neuromuscular disease ,RNA Splicing ,Administration, Oral ,030204 cardiovascular system & hematology ,Spinal Muscular Atrophies of Childhood ,Bioinformatics ,Dose-Response Relationship ,03 medical and health sciences ,0302 clinical medicine ,Settore MED/39 - NEUROPSICHIATRIA INFANTILE ,medicine ,Humans ,Risdiplam ,Type 1 Spinal Muscular Atrophy ,030212 general & internal medicine ,Progression-free survival ,610 Medicine & health ,Respiratory Tract Infections ,Dose-Response Relationship, Drug ,business.industry ,Infant ,Survival of motor neuron ,General Medicine ,Spinal muscular atrophy ,medicine.disease ,Survival of Motor Neuron 1 Protein ,Progression-Free Survival ,Clinical trial ,Dose–response relationship ,Settore MED/26 - NEUROLOGIA ,Pyrimidines ,nervous system ,Neuromuscular Agents ,RNA splicing ,Administration ,Female ,Drug ,business ,Respiratory Insufficiency ,Azo Compounds - Abstract
Background: Type 1 spinal muscular atrophy is a rare, progressive neuromuscular disease that is caused by low levels of functional survival of motor neuron (SMN) protein. Risdiplam is an orally administered, small molecule that modifies SMN2 pre-messenger RNA splicing and increases levels of functional SMN protein. Methods: We report the results of part 1 of a two-part, phase 2-3, open-label study of risdiplam in infants 1 to 7 months of age who had type 1 spinal muscular atrophy, which is characterized by the infant not attaining the ability to sit without support. Primary outcomes were safety, pharmacokinetics, pharmacodynamics (including the blood SMN protein concentration), and the selection of the risdiplam dose for part 2 of the study. Exploratory outcomes included the ability to sit without support for at least 5 seconds. Results: A total of 21 infants were enrolled. Four infants were in a low-dose cohort and were treated with a final dose at month 12 of 0.08 mg of risdiplam per kilogram of body weight per day, and 17 were in a high-dose cohort and were treated with a final dose at month 12 of 0.2 mg per kilogram per day. The baseline median SMN protein concentrations in blood were 1.31 ng per milliliter in the low-dose cohort and 2.54 ng per milliliter in the high-dose cohort; at 12 months, the median values increased to 3.05 ng per milliliter and 5.66 ng per milliliter, respectively, which represented a median of 3.0 times and 1.9 times the baseline values in the low-dose and high-dose cohorts, respectively. Serious adverse events included pneumonia, respiratory tract infection, and acute respiratory failure. At the time of this publication, 4 infants had died of respiratory complications. Seven infants in the high-dose cohort and no infants in the low-dose cohort were able to sit without support for at least 5 seconds. The higher dose of risdiplam (0.2 mg per kilogram per day) was selected for part 2 of the study. Conclusions: In infants with type 1 spinal muscular atrophy, treatment with oral risdiplam led to an increased expression of functional SMN protein in the blood. (Funded by F. Hoffmann-La Roche; ClinicalTrials.gov number, NCT02913482.).
- Published
- 2021
24. Validation of pneumonia prognostic scores in a statewide cohort of hospitalised patients with COVID‐19
- Author
-
Curt G. Beckwith, Zoe Weiss, Meghan McCarthy, Jad Aridi, Yiyun Shi, Aakriti Pandita, Anna Hardesty, and Dimitrios Farmakiotis
- Subjects
medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,medicine.medical_treatment ,Short Report ,030204 cardiovascular system & hematology ,Severity of Illness Index ,03 medical and health sciences ,0302 clinical medicine ,Influenza A Virus, H1N1 Subtype ,Internal medicine ,Severity of illness ,medicine ,Humans ,030212 general & internal medicine ,Hospital Mortality ,Mechanical ventilation ,Framingham Risk Score ,business.industry ,SARS-CoV-2 ,COVID-19 ,General Medicine ,Pneumonia ,Missing data ,medicine.disease ,Prognosis ,Predictive value ,Community-Acquired Infections ,Infectious Diseases ,Viral pneumonia ,Cohort ,business - Abstract
Objective We aimed to externally validate the predictive performance of two recently developed COVID‐19‐specific prognostic tools, the COVID‐GRAM and CALL scores, and prior prognostic scores for community‐acquired pneumonia (CURB‐65), viral pneumonia (MuBLSTA) and H1N1 influenza pneumonia (Influenza risk score) in a contemporary US cohort. Methods We included 257 hospitalised patients with laboratory‐confirmed COVID‐19 pneumonia from three teaching hospitals in Rhode Island. We extracted data from within the first 24 hours of admission. Variables were excluded if values were missing in >20% of cases, otherwise, missing values were imputed. One hundred and fifteen patients with complete data after imputation were used for the primary analysis. Sensitivity analysis was performed after the exclusion of one variable (LDH) in the complete dataset (n = 257). Primary and secondary outcomes were in‐hospital mortality and critical illness (mechanical ventilation or death), respectively. Results Only the areas under the receiver‐operating characteristic curves (RO‐AUC) of COVID‐GRAM (RO‐AUC = 0.775, 95% CI 0.525‐0.915) for in‐hospital death, and CURB65 for in‐hospital death (RO‐AUC = 0.842, 95% CI 0.674‐0.932) or critical illness (RO‐AUC = 0.766, 95% CI 0.584‐0.884) were significantly better than random. Sensitivity analysis yielded similar trends. Calibration plots showed better agreement between the estimated and observed probability of in‐hospital death for CURB65, compared with COVID‐GRAM. The negative predictive value (NPV) of CURB65 ≥2 was 97.2% for in‐hospital death and 88.1% for critical illness. Conclusions The COVID‐GRAM score demonstrated acceptable predictive performance for in‐hospital death. The CURB65 score had better prognostic utility for in‐hospital death and critical illness. The high NPV of CURB65 values ≥2 may be useful in triaging and allocation of resources.
- Published
- 2020
25. Clinical Profile and Outcome of Pediatric Mitochondrial Myopathy in China
- Author
-
Yi Wang, Yiyun Shi, Shuizhen Zhou, Chaoping Hu, Xihua Li, and Lei Zhao
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Mitochondrial DNA ,Cardiomyopathy ,Gene mutation ,Gastroenterology ,lcsh:RC346-429 ,03 medical and health sciences ,0302 clinical medicine ,Mitochondrial myopathy ,Internal medicine ,cytochrome-c oxidase ,medicine ,gene mutation ,Risk factor ,lcsh:Neurology. Diseases of the nervous system ,treatment ,Genetic heterogeneity ,business.industry ,mitochondrial myopathy ,medicine.disease ,030104 developmental biology ,Neurology ,Respiratory failure ,pathology ,Neurology (clinical) ,Chronic progressive external ophthalmoplegia ,business ,030217 neurology & neurosurgery - Abstract
Introduction: Mitochondrial myopathy in children has notable clinical and genetic heterogeneity, but detailed data is lacking.Patients and Methods: In this study, we retrospectively reviewed the clinical presentation, laboratory investigation, genetic and histopathological characteristics, and follow-ups of 21 pediatric mitochondrial myopathy cases from China.Results: Twenty-four patients suspected with mitochondrial myopathy were enrolled initially and 21 were genetically identified. Fourteen patients were found to harbor mitochondrial DNA point mutations (14/21, 66.7%), including m.3243A>G (9/15, 60%), m.3303C>T (2/15, 13.3%), m.3302A>G (1/15, 6.7%), m.3250T>C (1/15, 6.7%), m.3251A>G (1/15, 6.7%), of whom 12 patients presented with progressive proximal mitochondrial myopathy (12/14, 85.7%). Three patients revealed large-scale deletion in blood or muscle tissue (3/21, 14.3%), presenting with Kearns-Sayer syndrome (1/3, 33.3%) or chronic progressive external ophthalmoplegia (2/3, 66.7%). Four patients were found to harbor pathogenic nuclear gene variants (4/21, 19.0%), including five variants in TK2 gene and two variants in SURF1 gene. During the follow-ups up to 7 years, 10 patients developed cardiomyopathy (10/21, 47.6%), 13 patients occurred at least once hypercapnic respiratory failure (13/21, 61.9%), six experienced recurrent respiratory failure and intubation (6/21, 28.6%), eight patients failed to survive (8/21, 38.1%). With nocturnal non-invasive ventilation of BiPAP, three patients recovered from respiratory failure, and led a relative stable and functional life (3/21, 14.3%).Conclusion: Mitochondrial myopathy in children has great clinical, pathological, and genetical heterogeneity. Progressive proximal myopathy is most prevalent. Mitochondrial DNA point mutations are most common. And respiratory failure is a critical risk factor of poor prognosis.
- Published
- 2020
26. [Genetic analysis and treatment for an infant with cerebral creatine deficiency syndrome type 2]
- Author
-
Weihua, Sun, Bingbing, Wu, Mengyuan, Wu, Bin, Yang, Ping, Zhang, Feifan, Xiao, Yiyun, Shi, Hongjiang, Wu, and Wenhao, Zhou
- Subjects
Movement Disorders ,Brain Diseases, Metabolic, Inborn ,Humans ,Infant ,Female ,Guanidinoacetate N-Methyltransferase ,Language Development Disorders ,Creatine - Abstract
To carry out genetic and metabolite analysis for an infant with cerebral creatine deficiency syndrome type 2 (CCDS2).Clinical data of the child was collected. Whole-exome sequencing was carried out to identify potential variants by next generation sequencing. Candidate variants were confirmed by Sanger sequencing. Metabolites were determined by tandem mass spectrometry and magnetic resonance spectroscopy. Treatment was carried out following the diagnosis and genetic counseling for the affected family.Two novel heterozygous variants (c.289delC and c.392-1GC) of the GAMT gene were identified in the proband, which were respectively inherited from her father and mother. In silico analysis suggested both variants to be pathogenic. Creatine (Cr) level of the child was very low, and cerebral guanidinoacetate (GAA) level was slightly increased. But both had recovered to normal in two weeks, and cerebral Cr level was significantly improved after two months. Intellectual and motor development of the child were significantly improved.The child was diagnosed with CCDS type 2, for which pathogenic variants of the GAMT gene may be accountable. Treatment has attained a satisfactory effect for the patient.
- Published
- 2020
27. A case report of an intermediate phenotype between congenital myasthenic syndrome and D-2- and L-2-hydroxyglutaric aciduria due to novel SLC25A1 variants
- Author
-
Linmei Zhang, Bingbing Wu, Min Zhang, Wenhui Li, Xihua Li, Lei Zhao, Yiyun Shi, and Shuizhen Zhou
- Subjects
Male ,Mutation, Missense ,Organic Anion Transporters ,Case Report ,Compound heterozygosity ,Genetic analysis ,Congenital myasthenic syndrome ,lcsh:RC346-429 ,Mitochondrial Proteins ,03 medical and health sciences ,symbols.namesake ,Epilepsy ,0302 clinical medicine ,Genotype ,Humans ,Medicine ,Missense mutation ,SLC25A1 ,Child ,lcsh:Neurology. Diseases of the nervous system ,Myasthenic Syndromes, Congenital ,Genetics ,Sanger sequencing ,0303 health sciences ,business.industry ,030305 genetics & heredity ,Brain Diseases, Metabolic, Inborn ,General Medicine ,medicine.disease ,Phenotype ,D-2- and L-2-hydroxyglutaric aciduria ,symbols ,Neurology (clinical) ,business ,030217 neurology & neurosurgery - Abstract
Background Variants in the SLC25A1 gene are associated with a severe neurometabolic disease, D-2- and L-2-hydroxyglutaric aciduria (D/L-2-HGA). A report in 2014 presented the first account of congenital myasthenic syndrome (CMS) with mild intellectual disability (ID) caused by SLC25A1. To date, only two missense variants in SLC25A1 have been linked to CMS. Case presentations A Chinese boy presented fatigable muscular weakness, myasthenic crisis, epilepsy and developmental delay along with mild elevation of urinary 2-ketoglutarate (2-KG) and lactic acid levels. He showed a partial response to pyridostigmine. Genetic analysis using trio whole-exome sequencing (WES), Sanger sequencing, and cosegregation analyses revealed two novel pathogenic variants of SLC25A1 (c.628C > T, p.R210X; c.145G > A, p.V49M). Conclusions We report a boy who carries novel compound heterozygous variants of SLC25A1 and presents a phenotype intermediate between CMS and D/L-2-HGA. This case expands the range of known phenotypes and genotypes associated with SLC25A1.
- Published
- 2020
28. Additional file 1 of A case report of an intermediate phenotype between congenital myasthenic syndrome and D-2- and L-2-hydroxyglutaric aciduria due to novel SLC25A1 variants
- Author
-
Wenhui Li, Zhang, Min, Linmei Zhang, Yiyun Shi, Zhao, Lei, Bingbing Wu, Xihua Li, and Zhou, Shuizhen
- Subjects
macromolecular substances - Abstract
Additional file 1. Muscle biopsy. A–D Skeletal muscle sections from the patient were stained with COX (A), HE(B), MGT2 (C) and SDH (D) to visualize mitochondria. E-F Electron microscopy findings.
- Published
- 2020
- Full Text
- View/download PDF
29. Spatial-Temporal Variability and Dust-Capture Capability of 8 Plants in Urban China
- Author
-
Jie Tang, Yan Zha, Chi Feng, Yinlong Zhang, Yiyun Shi, and Xin Liu
- Subjects
010504 meteorology & atmospheric sciences ,Urban china ,Air pollution ,medicine ,Environmental Chemistry ,Environmental science ,010501 environmental sciences ,Particulates ,Atmospheric sciences ,medicine.disease_cause ,01 natural sciences ,0105 earth and related environmental sciences ,General Environmental Science - Published
- 2018
30. 518. Factors Associated with Severe COVID-19 among Patients Hospitalized in Rhode Island
- Author
-
Fizza S. Gillani, Jad Aridi, Meghan McCarthy, Curt G. Beckwith, Anna Hardesty, Yiyun Shi, Aakriti Pandita, and Silvia S. Chiang
- Subjects
medicine.medical_specialty ,business.industry ,Mortality rate ,Medical record ,Vital signs ,Retrospective cohort study ,medicine.disease ,Intensive care unit ,Comorbidity ,Tachypnea ,law.invention ,Infectious Diseases ,AcademicSubjects/MED00290 ,Oncology ,law ,Internal medicine ,Cohort ,Poster Abstracts ,medicine ,medicine.symptom ,business - Abstract
Background To better understand patient factors that impact clinical outcomes in COVID-19, we performed a retrospective cohort study of patients hospitalized with COVID-19 in Rhode Island to identify patient and clinical characteristics associated with severe disease. Methods We analyzed 259 patients admitted to our academic medical center during a three month period with confirmed COVID-19. Clinical data was extracted via chart review and lab results within the first 24 hours of admission were extracted directly from electronic medical records. Patients were divided in two groups based upon the highest level of supplemental oxygen (O2) required during hospitalization: severe COVID-19 (high flow O2, non-invasive, or invasive mechanical ventilation) and non-severe COVID-19 (low flow O2 or no supplemental O2). SAS 9.4 (Cary, NC) was used for statistical analyses. Chi-square or Fisher’s exact tests for categorical variables and the Student’s t-test for continuous variables were used to compare demographics, baseline comorbidities, and clinical data between the severe and non-severe groups. Table 1: Demographics Results Of 259 patients, 166 (64%) had non-severe disease, and 93 (36%) severe disease; median age [IQR] was 62 [51,73]. There were 138(53%) males and 75 (29%) Hispanics. Among non-Hispanics,124(48%) were White, 48(19%) African Americans, and 12(5%) other races. Sixty (23%) were admitted from a nursing facility and the in-hospital mortality rate was 15% (38/259). Severe COVID-19 was associated with older age (p=0.02), admission from nursing facility (p=0.009), increased BMI (p=0.03), diabetes mellitus (p=0.0002), and COPD (p=0.03). At the time of presentation, severe COVID-19 was associated with tachypnea, hypoxia, hypotension (all p< 0.0001), elevated BUN (p=0.002) and AST (p=0.001), and acute or chronic kidney injury (p=0.01). Median hospital stay [IQR] was 11 days [7,18] in the severe vs. 6 days [3,11] in the non-severe group. In the severe group, 72% required ICU admission and 39% died. Table 2: Medical comorbidities Table 3: Presenting symptoms and signs in the first 48 hours of admission Table 4: Basic labs in the first 24 hours Conclusion In this cohort of patients with COVID-19, specific comorbidities, and vital signs at presentation were associated with severe COVID-19. These findings help clinicians with early identification and triage of high risk patients. Disclosures All Authors: No reported disclosures
- Published
- 2020
31. 576. Half-dose Valganciclovir Prophylaxis is Safe and Cost-effective in CMV Seropositive Renal Transplant Recipients
- Author
-
Paul E. Morrissey, George Bayliss, Yiyun Shi, Ralph Rogers, Dimitrios Farmakiotis, Reginald Y. Gohh, Basma Merhi, Adena J. Osband, and Kendra Vieira
- Subjects
Pediatrics ,medicine.medical_specialty ,Infectious Diseases ,AcademicSubjects/MED00290 ,Oncology ,business.industry ,Renal transplant ,Poster Abstracts ,medicine ,Valganciclovir ,business ,medicine.drug - Abstract
Background Observational studies suggest that half-dose valganciclovir (VGV) prophylaxis (450 mg daily for normal renal function) is as effective as full-dose (900 mg daily) in preventing CMV infection among kidney transplant recipients (KTR). However, this practice is not supported by current guidelines, for fear of selecting resistance, mainly in high-risk, i.e. donor CMV seropositive/recipient negative (D+/R-) KTR. Full-dose VGV is costly, and possibly associated with higher incidence of neutropenia and BK viremia. Our institution adopted half-dose VGV prophylaxis for R+ KTR in January 2018. Methods We included R+ KTR transplanted between 1/1/2014 and 12/31/2018 at our center. Data were censored at 1-year post-transplant, graft loss or death. Primary outcomes were early (< 6 months from transplant) and any CMV viremia. Secondary outcomes were neutropenia, BK viremia, graft loss and death. Categorical variables were compared with χ 2 or Fisher’s exact tests, continuous variables with the Mann-Whitney test. We used log-rank and Gray’s tests to compare cumulative incidence of outcomes, after adjustment by propensity score for differences in baseline characteristics. Results 106 R+ KTR received full-dose and 35 half-dose VGV. Antithymocyte globulin (ATG) induction was associated with significantly higher cumulative incidence of both early (P=0.017) and any (P=0.02) CMV viremia, compared to basiliximab induction (Fig. 1). After adjusting for gender and induction regimen, we noted a signal for higher cumulative incidence of any (P=0.044), but not early (P=0.598) CMV viremia in the full-dose VGV group (Fig. 2). There were no significant differences (P >0.1) in incidence of neutropenia, BK viremia, graft loss or death between the two groups. Cost savings were estimated at $2630 per CMV R+ KTR (Table 1). Table 1. Comparison of outcomes and cost between the two anti-CMV prophylaxis groups. Data are presented as n (%), unless otherwise indicated. Fig 1. Probability of CMV viremia in KTR who received ATG vs. basiliximab induction. Fig 2. Probability of CMV viremia in KTR who received full-dose vs. half-dose VGV prophylaxis. Conclusion In our pilot series, half-dose VGV was at least as effective as full-dose VGV in preventing CMV viremia in R+ RTR, and less costly. If larger scale studies verify generalizability of these results, half-dose VGV may be considered as standard of care for R+ KTR. In KTR, the antimetabolite probably contributes to neutropenia more than VGV prophylaxis. Disclosures All Authors: No reported disclosures
- Published
- 2020
32. 530. COVID-19 in kidney transplant recipients: Single-center experience and case-control study
- Author
-
Anna Hardesty, Reginald Y. Gohh, Dimitrios Farmakiotis, Ralph Rogers, Yiyun Shi, Curt G. Beckwith, Adena J. Osband, Paul E. Morrissey, Aakriti Pandita, George Bayliss, Basma Merhi, and Kendra Vieira
- Subjects
medicine.medical_specialty ,business.industry ,medicine.medical_treatment ,Case-control study ,Immunosuppression ,Single Center ,Organ transplantation ,Discontinuation ,Transplantation ,AcademicSubjects/MED00290 ,Infectious Diseases ,Oncology ,Internal medicine ,Poster Abstracts ,Case fatality rate ,medicine ,Hemodialysis ,business - Abstract
Background Organ transplant recipients (OTR) are considered high-risk for morbidity and mortality from COVID-19. Case-fatality rates (CFR) vary significantly in different case series, and some patients were still hospitalized at the time of analyses. To our knowledge, no case-control study of COVID-19 in OTR has been published to-date. Methods We captured kidney transplant recipients (KTR) diagnosed with COVID-19 between 3/1 and 5/18/2020. After exclusion of KTR on hemodialysis and off immunosuppression (IS), we compared the clinical course of COVID-19 between hospitalized KTR and non-transplant patients, matched by sex and age (controls). All patients were discharged from the hospital or died. Results 16 KTR had COVID-19. All 3 KTR off IS, who were excluded from further analyses, survived. Median age was 54 (range: 34–65) years; 5/13 KTR (38.4%) were men. Median time from transplant was 41 (range: 1–203) months. Two KTR, both transplanted >10 years ago, were managed as outpatients. IS was reduced in 12/13 (92.3%), most often by discontinuation of the antimetabolite. IL6 levels were >1,000 (normal: < 5) pg/mL in 3 KTR. Tacrolimus or sirolimus levels were >10 ng/mL in 6/9 KTR (67%) (Table 1). Eleven KTR were hospitalized (84.6%) and matched with 44 controls. One KTR, the only one treated with hydroxychloroquine, died (CFR 5.8%; 7.6% in KTR on IS; 9% in hospitalized KTR on IS). Four controls died (CFR: 9%; state CFR: 5.2%; inpatient CFR: 16.6%). There were no significant differences in length of stay or worst oxygenation status between hospitalized KTR and controls. Four KTR (30.7%), received remdesivir, 4 convalescent plasma, 3 (23%) tocilizumab. KTR received more often broad-spectrum antibiotics, convalescent plasma or tocilizumab, compared to controls (Table 2). Table 1 Table 2 Conclusion Unlike early reports from the pandemic epicenters, the clinical course and outcomes of KTR with COVID-19 in our small case series were comparable to those of non-transplant patients. Calcineurin or mTOR inhibitor levels were high, likely due to diarrhea and COVID-19-related hepatic dysfunction. Extremely high IL6 levels were common. The role of IS and potential benefits from investigational treatments remain to be elucidated. A larger multi-institutional study is underway. Disclosures All Authors: No reported disclosures
- Published
- 2020
33. Clinical and molecular characterization of pediatric mitochondrial disorders in south of China
- Author
-
Shuizhen Zhou, Yi Wang, Chaoping Hu, Yiyun Shi, Lei Zhao, Xihua Li, and Bingbing Wu
- Subjects
Male ,0301 basic medicine ,China ,Mitochondrial DNA ,Mitochondrial Diseases ,Mitochondrial disease ,NDUFV1 ,030105 genetics & heredity ,Biology ,Gene mutation ,medicine.disease_cause ,Mitochondrial Proteins ,03 medical and health sciences ,Mitochondrial myopathy ,Exome Sequencing ,Genetics ,medicine ,Humans ,Genetic Testing ,Child ,Muscle, Skeletal ,Genetics (clinical) ,Exome sequencing ,Mutation ,Infant ,General Medicine ,medicine.disease ,030104 developmental biology ,Child, Preschool ,Female ,HADHB - Abstract
Mitochondrial disorders (MDs) are genetic ailments affecting all age groups. Epidemiological data and frequencies of gene mutations in pediatric patients in China are scarce. This retrospective study assessed 101 patients with suspected MDs treated at the Neurology Department of Children's Hospital, Fudan University, in 2011–2017. Mitochondrial (mtDNA) and nuclear (nDNA) samples were assessed by long-range polymerase chain reaction (PCR)-based whole mtDNA sequencing and whole exome sequencing (WES) for identifying pathogenic mutations. Muscle samples underwent various staining protocols and immunofluorescence for detecting selected proteins. Seventeen mutations in the MT-TL1, MT-COX2, MT-ND4, MT, tRNA TRNE, MT-TN, MT-TK, MT-ATP6, MT-ND6, MT-ND3 and MT-CO3 genes were identified in 39 patients, of which m.3243A > G, m.3303C > T, m.8993T > C/G, m.9176T > C, and m.10191T > C were most common. Mitochondrial myopathy and MELAS were most common for m.3243A > G mutation. Four novel mutations were detected, including m.9478insT, m.5666T > C, m.8265T > C, and m.8380–13600 deletion mutations related to Leigh syndrome, mitochondrial myopathy and KSS, respectively. Thirty-three mutations in the TK2, POLG, IBA57, HADHB, FBXL4, ALDH5A1, FOXRED1, TPK1, NDUFAF5, NDUFAF7, NDUFV1, CARS2, PDHA1, and HIBCH genes were identified in 19 patients, including 23 currently unknown. Higher rates of TK2, POLG, IBA57, and HADHB mutations were found in nDNA-mutated MD compared with the remaining individuals. Besides, IBA57 c.286T > C (p.Y96H), TK2 c.497A > T (p.D166V) founder mutations critically contributed to MDs. Comprehensive genomic analysis plays a critical role in pediatric MD diagnosis. These data summarize the relative frequencies of different gene mutations in a large Chinese population, and identified 23 novel MD-associated nDNA and 4 novel mtDNA mutations.
- Published
- 2020
34. Spatial-Temporal Variability and Dust-Capture Capability of 8 Plants in Urban China.
- Author
-
Yan Zha, Yiyun Shi, Jie Tang, Xin Liu, Chi Feng, and Yinlong Zhang
- Subjects
- *
URBAN plants , *PARTICULATE matter , *AIR pollution , *PARTICLE size distribution - Abstract
Urban plants have been proven to mitigate ambient particulate matter (PM), which can benefit urban planners in their attempts to control urban air pollution. In this study, PM depositions on the leaves of 8 tree species were quantitatively analysed in 7 functional areas of the city of Nanjing, China, over the course of one year. The results demonstrated that leaf PM included different particle size fractions (PM10 and PM2.5), and differed among seasons and species. The highest amounts of total PM, PM10, and PM2.5 were found in the industrial area, and the mean values were 80.24 μg/cm2, 52.14 μg/cm2, and 15.51 μg/cm2, respectively, and the highest accumulation of total PM (60.65 μg/cm2), PM10 (37.29 μg/cm2), and PM2.5 (11.23 μg/cm2) occurred in winter. Significant differences were found between the tree species tested. Cedrus deodara exhibited high amounts of the total PM, PM10, and PM2.5 accumulations. This study examined the mass and quantity distribution of PM among tree species, and identified the particles combined with a scanning electron microscope (SEM). In terms of particle mass, 48% of the identified particles had a diameter of 10 μm, and only 18.3% of them had a diameter of 2.5 μm. In terms of particle number, the results indicated that 73% of them had a diameter of 2.5 μm, and only 5.5% of them had a diameter of 10 μm. To test the relationship between leaf traits and PM2.5 accumulation, results showed that stomata size, density, and hair were significantly related to the PM2.5 capture quantity. As far as we know, this is the first paper to present the mass and quantity distribution of the PM of different tree species in Nanjing. The results not only give comprehensive insights into the dust-retaining capability of tree species but also offer a selection of species for urban green areas where the goal is to mitigate urban airborne PM. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
35. [The study of the domestic digital amplitude integrated EEG performance]
- Author
-
Yiyun, Shi, Guoqiang, Cheng, Xiaomei, Shao, Zhizhong, Wang, Lei, Li, Shaobin, Wang, Wenhao, Zhou, and Haojie, Zheng
- Subjects
Male ,Seizures ,Brain Injuries ,Infant, Newborn ,Humans ,Electroencephalography ,Female ,Signal Processing, Computer-Assisted ,Monitoring, Physiologic - Abstract
A total of 20 normal newborns and 8 brain injured newborns were monitored for 2 hours with domestic digital amplitude integrated cerebral function monitor (CFM 3000) and similar imported products LECTROMED CFM 5330 simultaneously. 32 newborns with seizures or suspected seizures were monitored with CFM 3000 and conventional electroencephalogram (EEG) simultaneously. The tracings of amplitude integrated electroencephalogram (aEEG) monitored by CFM 3000 and LECTROMED CFM 5330 are similar to each other. The continuous electrical activity, sleep-wake cycle, the mean of lower or upper bound voltage and duration of broad and narrow band were no significant statistical difference between different machines; The pattern of aEEG tracing of 8 infants with brain injury monitored by CFM 3000 was the same as monitored by the LECTROMED CFM 5330. The detection rate of seizure with CFM 3000 and conventional EEG were no statistically significant difference, and the consistency with Kappa test was: Kappa = 0.552, P = 0.001. The CFM 3000 can reflect the change of cerebral function and identify infants with brain injury reliably.
- Published
- 2012
36. [Analysis of neonatal amplitude integrated electroencephalogram based on nonlinear dynamics]
- Author
-
Shaobin, Wang, Yikang, Wang, Zhizhong, Wang, Yiyun, Shi, and Xiaomei, Shao
- Subjects
Neonatal Screening ,Nonlinear Dynamics ,Seizures ,Infant, Newborn ,Brain ,Humans ,Electroencephalography ,Signal Processing, Computer-Assisted - Abstract
Amplitude integrated electroencephalogram (aEEG), also known as cerebral function monitor (CFM), is a non-invasive detection of brain function, having good accuracy in early diagnosis and prognosis evaluation of neonatal brain damage. Today, doctors classify amplitude integrated electroencephalogram mainly based on its waveform and amplitude, then they make correct diagnosis of brain function of neonates. However, in some cases, the amplitude and waveform of aEEG are not very clearly shown, the only way is relying on doctors' experience to give out judgement, which has some subjective factors, so doctors can not present accurate diagnostic information. To solve this problem by the use of non-linear dynamics, we calculate and analyze the correlation dimension, Lyapunov exponent and approximate entropy of the aEEG for neonates with convulsions and for normal neonates; then we take these three characters as a three-dimensional vector; finally, the aEEG of neonates with convulsions and the aEEG of normal neonates are distributed into two parts in threedimensional space, thus the correlation dimension, Lyapunov exponent and approximate entropy of the aEEG can reflect the internal information of neonatal brain function. Therefore, it can be used as a new method for studying neonatal aEEG.
- Published
- 2010
37. A comprehensive database of Duchenne and Becker muscular dystrophy patients (0–18 years old) in East China
- Author
-
Yi Wang, Yiyun Shi, Fang Liu, Bingbing Wu, Hui Li, Wei Shi, Lei Zhao, Xihua Li, Shui-zhen Zhou, and Chaoping Hu
- Subjects
Male ,musculoskeletal diseases ,China ,congenital, hereditary, and neonatal diseases and abnormalities ,Adolescent ,Databases, Factual ,Nonsense mutation ,Population ,computer.software_genre ,Dystrophin ,medicine ,Humans ,Outpatient clinic ,Genetics(clinical) ,Pharmacology (medical) ,Registries ,Muscular dystrophy ,Child ,education ,Genetics (clinical) ,Medicine(all) ,education.field_of_study ,Database ,business.industry ,Research ,Infant ,Duchenne and Becker muscular dystrophy ,General Medicine ,medicine.disease ,Exon skipping ,Muscular Dystrophy, Duchenne ,Patient recruitment ,Clinical trial ,The CHFU database ,Child, Preschool ,Ambulatory ,Patient management ,business ,computer - Abstract
Currently, there is no cure for Duchenne and Becker muscular dystrophies (DMD/BMD). However, clinical trials with new therapeutic strategies are being conducted or considered. A comprehensive database is critical for patient recruitment and efficacy evaluation. China has the largest population, yet, no comprehensive database for DMD/BMD is available. Our study registered the data of the DMD/BMD patients in East China. A modified registry form of Remudy ( http://www.remudy.jp/ ) was applied to Chinese DMD/BMD patients through the outpatient clinic at Children’s Hospital of Fudan University, Shanghai during the period of August 2011 to December 2013. The data included geographic distribution of patients, age at diagnosis, clinical manifestation, genetic analysis and treatment status. 194 DMD and 35 BMD patients were registered. Most patients lived in East China, namely Jiangsu province, Anhui province, Zhejiang province, Jiangxi province, Shanghai, Fujian province and Shandong province. All individuals aged less than 18 years (age limit to a children’s hospital). Diagnosis was made for a majority of patients during the age of 3–4 (16.6%) and 7–8 (14.8%) years old. Exon deletion was the most frequent genetic mutations (65.5% and 74.3%) followed by point mutations (14.4% and 11.4%), duplications (9.8% and 8.6%) and small insertion/deletion (9.3% and 2.9%) for DMD and BMD, respectively. 82.5% of DMD registrants were ambulatory, and all the BMD registrants were able to walk. 26.3% of DMD registrants have been treated with steroids. Cardiac functions were examined for 46.4% DMD boys and 45.7% BMD boys and respiratory functions were examined for 18.6% DMD boys and 14.3% BMD boys. Four boys with abnormal cardiac function were prescribed for treatment with cardiac medicine. 33.2% of DMD patients are eligible for exon skipping therapy, and among them 9.2% and 4.3% patients are eligible for skipping exon 51 and 53, respectively. The database is the first linking accurate genetic diagnosis with clinical manifestation and treatment status of dystrophinopathy patients in East China. It provides comprehensive information essential for further patient management, especially for promotion of international cooperation in developing experimental therapies such as exon skipping and read-through of nonsense mutations targeting a subgroup of DMD patient population.
- Published
- 2015
38. A comprehensive database of Duchenne and Becker muscular dystrophy patients (0-18 years old) in East China.
- Author
-
Xihua Li, Lei Zhao, Shuizhen Zhou, Chaoping Hu, Yiyun Shi, Wei Shi, Hui Li, Fang Liu, Bingbing Wu, and Yi Wang
- Subjects
BECKER muscular dystrophy ,TREATMENT of Duchenne muscular dystrophy ,DUCHENNE muscular dystrophy ,CLINICAL trials ,PATIENT selection ,DIAGNOSIS ,PATIENTS ,THERAPEUTICS - Abstract
Background: Currently, there is no cure for Duchenne and Becker muscular dystrophies (DMD/BMD). However, clinical trials with new therapeutic strategies are being conducted or considered. A comprehensive database is critical for patient recruitment and efficacy evaluation. China has the largest population, yet, no comprehensive database for DMD/BMD is available. Our study registered the data of the DMD/BMD patients in East China. Methods: A modified registry form of Remudy (http://www.remudy.jp/) was applied to Chinese DMD/BMD patients through the outpatient clinic at Children's Hospital of Fudan University, Shanghai during the period of August 2011 to December 2013. The data included geographic distribution of patients, age at diagnosis, clinical manifestation, genetic analysis and treatment status. Results: 194 DMD and 35 BMD patients were registered. Most patients lived in East China, namely Jiangsu province, Anhui province, Zhejiang province, Jiangxi province, Shanghai, Fujian province and Shandong province. All individuals aged less than 18 years (age limit to a children's hospital). Diagnosis was made for a majority of patients during the age of 3-4 (16.6%) and 7-8 (14.8%) years old. Exon deletion was the most frequent genetic mutations (65.5% and 74.3%) followed by point mutations (14.4% and 11.4%), duplications (9.8% and 8.6%) and small insertion/deletion (9.3% and 2.9%) for DMD and BMD, respectively. 82.5% of DMD registrants were ambulatory, and all the BMD registrants were able to walk. 26.3% of DMD registrants have been treated with steroids. Cardiac functions were examined for 46.4% DMD boys and 45.7% BMD boys and respiratory functions were examined for 18.6% DMD boys and 14.3% BMD boys. Four boys with abnormal cardiac function were prescribed for treatment with cardiac medicine. 33.2% of DMD patients are eligible for exon skipping therapy, and among them 9.2% and 4.3% patients are eligible for skipping exon 51 and 53, respectively. Conclusions: The database is the first linking accurate genetic diagnosis with clinical manifestation and treatment status of dystrophinopathy patients in East China. It provides comprehensive information essential for further patient management, especially for promotion of international cooperation in developing experimental therapies such as exon skipping and read-through of nonsense mutations targeting a subgroup of DMD patient population. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.