43 results on '"Yorley Duarte"'
Search Results
2. Increased Absorption of Thyroxine in a Murine Model of Hypothyroidism Using Water/CO2 Nanobubbles
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Maria Cecilia Opazo, Osvaldo Yañez, Valeria Márquez-Miranda, Johana Santos, Maximiliano Rojas, Ingrid Araya-Durán, Daniel Aguayo, Matías Leal, Yorley Duarte, Jorge Kohanoff, and Fernando D. González-Nilo
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thyroxine ,nanobubbles ,drug delivery ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Thyroxine (T4) is a drug extensively utilized for the treatment of hypothyroidism. However, the oral absorption of T4 presents certain limitations. This research investigates the efficacy of CO2 nanobubbles in water as a potential oral carrier for T4 administration to C57BL/6 hypothyroid mice. Following 18 h of fasting, the formulation was administered to the mice, demonstrating that the combination of CO2 nanobubbles and T4 enhanced the drug’s absorption in blood serum by approximately 40%. To comprehend this observation at a molecular level, we explored the interaction mechanism through which T4 engages with the CO2 nanobubbles, employing molecular simulations, semi-empirical quantum mechanics, and PMF calculations. Our simulations revealed a high affinity of T4 for the water–gas interface, driven by additive interactions between the hydrophobic region of T4 and the gas phase and electrostatic interactions of the polar groups of T4 with water at the water–gas interface. Concurrently, we observed that at the water–gas interface, the cluster of T4 formed in the water region disassembles, contributing to the drug’s bioavailability. Furthermore, we examined how the gas within the nanobubbles aids in facilitating the drug’s translocation through cell membranes. This research contributes to a deeper understanding of the role of CO2 nanobubbles in drug absorption and subsequent release into the bloodstream. The findings suggest that utilizing CO2 nanobubbles could enhance T4 bioavailability and cell permeability, leading to more efficient transport into cells. Additional research opens the possibility of employing lower concentrations of this class of drugs, thereby potentially reducing the associated side effects due to poor absorption.
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- 2024
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3. Multicomponent synthesis and photophysical study of novel α,β-unsaturated carbonyl depsipeptides and peptoids
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Ricelia González, Juliana Murillo-López, Walter Rabanal-León, Luis Prent-Peñaloza, Odette Concepción, Pedro Olivares, Yorley Duarte, Alexander F. de la Torre, Margarita Gutiérrez, and Julio Caballero
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multicomponent reactions ,depsipeptides ,peptoids ,time-dependent density functional theory (TD-DFT) ,peptidomimetics ,Chemistry ,QD1-999 - Abstract
Multicomponent reactions were performed to develop novel α,β-unsaturated carbonyl depsipeptides and peptoids incorporating various chromophores such as cinnamic, coumarin, and quinolines. Thus, through the Passerini and Ugi multicomponent reactions (P-3CR and U-4CR), we obtained thirteen depsipeptides and peptoids in moderate to high yield following the established protocol and fundamentally varying the electron-rich carboxylic acid as reactants. UV/Vis spectroscopy was utilized to study the photophysical properties of the newly synthesized compounds. Differences between the carbonyl-substituted chromophores cause differences in electron delocalization that can be captured in the spectra. The near UV regions of all the compounds exhibited strong absorption bands. Compounds P2, P5, U2, U5, and U7 displayed absorption bands in the range of 250–350 nm, absorbing radiation in this broad region of the electromagnetic spectrum. A photostability study for U5 showed that its molecular structure does not change after exposure to UV radiation. Fluorescence analysis showed an incipient emission of U5, while U6 showed blue fluorescence under UV radiation. The photophysical properties and electronic structure were also determined by TD-DFT theoretical study.
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- 2023
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4. Gut microbiota short-chain fatty acids and their impact on the host thyroid function and diseases
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María José Mendoza-León, Ashutosh K. Mangalam, Alejandro Regaldiz, Enrique González-Madrid, Ma. Andreina Rangel-Ramírez, Oscar Álvarez-Mardonez, Omar P. Vallejos, Constanza Méndez, Susan M. Bueno, Felipe Melo-González, Yorley Duarte, Ma. Cecilia Opazo, Alexis M. Kalergis, and Claudia A. Riedel
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thyroid disorders ,metabolic diseases ,gut microbiota ,dysbiosis ,metabolism and endocrinology ,Short-chain Fatty Acids (SCFAs) ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
Thyroid disorders are clinically characterized by alterations of L-3,5,3’,5’-tetraiodothyronine (T4), L-3,5,3’-triiodothyronine (T3), and/or thyroid-stimulating hormone (TSH) levels in the blood. The most frequent thyroid disorders are hypothyroidism, hyperthyroidism, and hypothyroxinemia. These conditions affect cell differentiation, function, and metabolism. It has been reported that 40% of the world’s population suffers from some type of thyroid disorder and that several factors increase susceptibility to these diseases. Among them are iodine intake, environmental contamination, smoking, certain drugs, and genetic factors. Recently, the intestinal microbiota, composed of more than trillions of microbes, has emerged as a critical player in human health, and dysbiosis has been linked to thyroid diseases. The intestinal microbiota can affect host physiology by producing metabolites derived from dietary fiber, such as short-chain fatty acids (SCFAs). SCFAs have local actions in the intestine and can affect the central nervous system and immune system. Modulation of SCFAs-producing bacteria has also been connected to metabolic diseases, such as obesity and diabetes. In this review, we discuss how alterations in the production of SCFAs due to dysbiosis in patients could be related to thyroid disorders. The studies reviewed here may be of significant interest to endocrinology researchers and medical practitioners.
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- 2023
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5. Insights into Early Steps of Decanoic Acid Self-Assemblies under Prebiotic Temperatures Using Molecular Dynamics Simulations
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Romina V. Sepulveda, Christopher Sbarbaro, Ma Cecilia Opazo, Yorley Duarte, Fernando González-Nilo, and Daniel Aguayo
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prebiotic membranes ,decanoic acids ,peptide–membrane interactions ,molecular dynamics simulations ,Chemical technology ,TP1-1185 ,Chemical engineering ,TP155-156 - Abstract
The origin of life possibly required processes in confined systems that facilitated simple chemical reactions and other more complex reactions impossible to achieve under the condition of infinite dilution. In this context, the self-assembly of micelles or vesicles derived from prebiotic amphiphilic molecules is a cornerstone in the chemical evolution pathway. A prime example of these building blocks is decanoic acid, a short-chain fatty acid capable of self-assembling under ambient conditions. This study explored a simplified system made of decanoic acids under temperatures ranging from 0 °C to 110 °C to replicate prebiotic conditions. The study revealed the first point of aggregation of decanoic acid into vesicles and examined the insertion of a prebiotic-like peptide in a primitive bilayer. The information gathered from this research provides critical insights into molecule interactions with primitive membranes, allowing us to understand the first nanometric compartments needed to trigger further reactions that were essential for the origin of life.
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- 2023
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6. Direct Oral FXa Inhibitors Binding to Human Serum Albumin: Spectroscopic, Calorimetric, and Computational Studies
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Nory Mariño-Ocampo, Diego F. Rodríguez, Daniel Guerra Díaz, Daniel Zúñiga-Núñez, Yorley Duarte, Denis Fuentealba, and Flavia C. Zacconi
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FXa inhibitors ,human serum albumin ,fluorescence ,isothermal titration calorimetry ,molecular modeling ,direct oral FXa inhibitors ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Direct FXa inhibitors are an important class of bioactive molecules (rivaroxaban, apixaban, edoxaban, and betrixaban) applied for thromboprophylaxis in diverse cardiovascular pathologies. The interaction of active compounds with human serum albumin (HSA), the most abundant protein in blood plasma, is a key research area and provides crucial information about drugs’ pharmacokinetics and pharmacodynamic properties. This research focuses on the study of the interactions between HSA and four commercially available direct oral FXa inhibitors, applying methodologies including steady-state and time-resolved fluorescence, isothermal titration calorimetry (ITC), and molecular dynamics. The HSA complexation of FXa inhibitors was found to occur via static quenching, and the complex formation in the ground states affects the fluorescence of HSA, with a moderate binding constant of 104 M−1. However, the ITC studies reported significantly different binding constants (103 M−1) compared with the results obtained through spectrophotometric methods. The suspected binding mode is supported by molecular dynamics simulations, where the predominant interactions were hydrogen bonds and hydrophobic interactions (mainly π–π stacking interactions between the phenyl ring of FXa inhibitors and the indole moiety of Trp214). Finally, the possible implications of the obtained results regarding pathologies such as hypoalbuminemia are briefly discussed.
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- 2023
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7. Development of a PHBV nanoparticle as a peptide vehicle for NOD1 activation
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Mauricio Cabaña-Brunod, Pablo A. Herrera, Valeria Márquez-Miranda, Felipe M. Llancalahuen, Yorley Duarte, Danilo González-Nilo, Juan A. Fuentes, Cristián Vilos, Luis Velásquez, and Carolina Otero
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nanoparticles ,macrophage ,innate immunity ,nod1 agonist ,phbv ,Therapeutics. Pharmacology ,RM1-950 - Abstract
NOD1 is an intracellular receptor that, when activated, induces gene expression of pro-inflammatory factors promoting macrophages and neutrophils recruitment at the infection site. However, iE-DAP, the dipeptide agonist that promotes this receptor's activation, cannot permeate cell membranes. To develop a nanocarrier capable of achieving a high and prolonged activation over time, iE-DAP was encapsulated in nanoparticles (NPs) made of poly (3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV). The physicochemical properties, colloidal stability, encapsulation efficiency, and cellular uptake of iE-DAP-loaded PHVB NPs were analyzed. Results evidenced that physicochemical properties of iE-DAP-loaded NPs remained stable over time, and NPs were efficiently internalized into cells, a process that depends on time and concentration. Moreover, our results showed that NPs elicited a controlled cargo release in vitro, and the encapsulated agonist response was higher than its free form, suggesting the possibility of activating intracellular receptors triggering an immune response through the release of NOD1 agonist.
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- 2021
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8. Molecular modeling and structural analysis of some tetrahydroindazole and cyclopentanepyrazole derivatives as COX-2 inhibitors
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Efraín Polo-Cuadrado, Karen Acosta-Quiroga, Cristian Rojas-Peña, Yeray A. Rodriguez-Nuñez, Yorley Duarte, Iván Brito, Jonathan Cisterna, and Margarita Gutiérrez
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Tetrahydroindazole ,Pyrazole ,COX-2 enzyme ,Molecular Docking ,Molecular dynamics simulation ,Crystal structure ,Chemistry ,QD1-999 - Abstract
In an attempt to rationalize the search for new potential anti-inflammatory compounds on the COX-2 enzyme, we carried out an in silico protocol that successfully combines the prediction of physicochemical and pharmacokinetic properties, molecular docking, molecular dynamic simulation, and free energy calculation. Starting from a small library of compounds synthesized previously, it was found that 70% of the compounds analyzed satisfy with the associated values to physicochemical principles as key evaluation parameters for the drug-likeness; all the compounds presented good gastrointestinal absorption and cerebral permeability and they showed an interaction with the Arg 106 residue of the COX-2 isoenzyme. Finally, it was obtained that compound 3ab has a binding mode, binding energy, and stability in the active site of COX-2 like the reference drug celecoxib, suggesting that this compound could become a powerful candidate in the inhibition of the COX-2 enzyme. In addition, we realized the crystallographic analysis of compounds 3j, 3r, and 3t defining the crystal parameters and the Packing interactions.
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- 2022
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9. The TGA Transcription Factors from Clade II Negatively Regulate the Salicylic Acid Accumulation in Arabidopsis
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Alejandro Fonseca, Tomás Urzúa, Joanna Jelenska, Christopher Sbarbaro, Aldo Seguel, Yorley Duarte, Jean T. Greenberg, Loreto Holuigue, Francisca Blanco-Herrera, and Ariel Herrera-Vásquez
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salicylic acid ,TGA transcription factors ,Pseudomonas syringae ,AvrRPM1 ,UV-C ,tga256 ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Salicylic acid (SA) is a hormone that modulates plant defenses by inducing changes in gene expression. The mechanisms that control SA accumulation are essential for understanding the defensive process. TGA transcription factors from clade II in Arabidopsis, which include the proteins TGA2, TGA5, and TGA6, are known to be key positive mediators for the transcription of genes such as PR-1 that are induced by SA application. However, unexpectedly, stress conditions that induce SA accumulation, such as infection with the avirulent pathogen P. syringae DC3000/AvrRPM1 and UV-C irradiation, result in enhanced PR-1 induction in plants lacking the clade II TGAs (tga256 plants). Increased PR-1 induction was accompanied by enhanced isochorismate synthase-dependent SA production as well as the upregulation of several genes involved in the hormone’s accumulation. In response to avirulent P. syringae, PR-1 was previously shown to be controlled by both SA-dependent and -independent pathways. Therefore, the enhanced induction of PR-1 (and other defense genes) and accumulation of SA in the tga256 mutant plants is consistent with the clade II TGA factors providing negative feedback regulation of the SA-dependent and/or -independent pathways. Together, our results indicate that the TGA transcription factors from clade II negatively control SA accumulation under stress conditions that induce the hormone production. Our study describes a mechanism involving old actors playing new roles in regulating SA homeostasis under stress.
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- 2022
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10. Novel TRPV1 Channel Agonists With Faster and More Potent Analgesic Properties Than Capsaicin
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Yorley Duarte, Javier Cáceres, Romina V. Sepúlveda, Diego Arriagada, Pedro Olivares, Ignacio Díaz-Franulic, Jimmy Stehberg, and Fernando González-Nilo
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transient receptor potential vanilloid 1 channels ,TRPV1 ,drug discovery ,capsaicin ,analgesic ,carrageenan ,Therapeutics. Pharmacology ,RM1-950 - Abstract
The transient receptor potential vanilloid 1 (TRPV1) ion channel is a member of the family of Transient Receptor Potential (TRP) channels that acts as a molecular detector of noxious signals in primary sensory neurons. Activated by capsaicin, heat, voltage and protons, it is also well known for its desensitization, which led to the medical use of topically applied TRPV1 agonist capsaicin for its long-lasting analgesic effects. Here we report three novel small molecules, which were identified using a Structure-Based Virtual Screening for TRPV1 from the ZINC database. The three compounds were tested using electrophysiological assays, which confirmed their capsaicin-like agonist activity. von Frey filaments were used to measure the analgesic effects of the compounds applied topically on tactile allodynia induced by intra-plantar carrageenan. All compounds had anti-nociceptive activity, but two of them showed faster and longer lasting analgesic effects than capsaicin. The present results suggest that TRPV1 agonists different from capsaicin could be used to develop topical analgesics with faster onset and more potent effects.
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- 2020
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11. Green by Design: Convergent Synthesis, Computational Analyses, and Activity Evaluation of New FXa Inhibitors Bearing Peptide Triazole Linking Units
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Diego F. Rodríguez, Francisca Durán-Osorio, Yorley Duarte, Pedro Olivares, Yanina Moglie, Kamal Dua, and Flavia C. Zacconi
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FXa inhibitors ,DOACs ,green chemistry ,microwave synthesis ,click chemistry ,drug discovery ,Pharmacy and materia medica ,RS1-441 - Abstract
Green chemistry implementation has led to promising results in waste reduction in the pharmaceutical industry. However, the early sustainable development of pharmaceutically active compounds and ingredients remains a considerable challenge. Herein, we wish to report a green synthesis of new pharmaceutically active peptide triazoles as potent factor Xa inhibitors, an important drug target associated with the treatment of diverse cardiovascular diseases. The new inhibitors were synthesized in three steps, featuring cycloaddition reactions (high atom economy), microwave-assisted organic synthesis (energy efficiency), and copper nanoparticle catalysis, thus featuring Earth-abundant metals. The molecules obtained showed FXa inhibition, with IC50-values as low as 17.2 μM and no associated cytotoxicity in HEK293 and HeLa cells. These results showcase the environmental potential and chemical implications of the applied methodologies for the development of new molecules with pharmacological potential.
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- 2021
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12. Different Classes of Antidepressants Inhibit the Rat α7 Nicotinic Acetylcholine Receptor by Interacting within the Ion Channel: A Functional and Structural Study
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Yorley Duarte, Maximiliano Rojas, Jonathan Canan, Edwin G. Pérez, Fernando González-Nilo, and Jesús García-Colunga
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α7 nicotinic acetylcholine receptors ,biological activity ,hippocampus ,antidepressants ,in silico studies ,allosteric modulators ,Organic chemistry ,QD241-441 - Abstract
Several antidepressants inhibit nicotinic acetylcholine receptors (nAChRs) in a non-competitive and voltage-dependent fashion. Here, we asked whether antidepressants with a different structure and pharmacological profile modulate the rat α7 nAChR through a similar mechanism by interacting within the ion-channel. We applied electrophysiological (recording of the ion current elicited by choline, ICh, which activates α7 nAChRs from rat CA1 hippocampal interneurons) and in silico approaches (homology modeling of the rat α7 nAChR, molecular docking, molecular dynamics simulations, and binding free energy calculations). The antidepressants inhibited ICh with the order: norfluoxetine ~ mirtazapine ~ imipramine < bupropion ~ fluoxetine ~ venlafaxine ~ escitalopram. The constructed homology model of the rat α7 nAChR resulted in the extracellular vestibule and the channel pore is highly negatively charged, which facilitates the permeation of cations and the entrance of the protonated form of antidepressants. Molecular docking and molecular dynamics simulations were carried out within the ion−channel of the α7 nAChR, revealing that the antidepressants adopt poses along the receptor channel, with slightly different binding-free energy values. Furthermore, the inhibition of ICh and free energy values for each antidepressant-receptor complex were highly correlated. Thus, the α7 nAChR is negatively modulated by a variety of antidepressants interacting in the ion−channel.
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- 2021
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13. Stretch-Induced Activation of Pannexin 1 Channels Can Be Prevented by PKA-Dependent Phosphorylation
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Ximena López, Rosalba Escamilla, Paola Fernández, Yorley Duarte, Fernando González-Nilo, Nicolás Palacios-Prado, Agustín D. Martinez, and Juan C. Sáez
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protein phosphorylation ,site-directed mutation ,dye uptake ,adenosine ,cAMP ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Pannexin 1 channels located in the cell membrane are permeable to ions, metabolites, and signaling molecules. While the activity of these channels is known to be modulated by phosphorylation on T198, T308, and S206, the possible involvement of other putative phosphorylation sites remains unknown. Here, we describe that the activity of Panx1 channels induced by mechanical stretch is reduced by adenosine via a PKA-dependent pathway. The mechanical stretch-induced activity—measured by changes in DAPI uptake—of Panx1 channels expressed in HeLa cell transfectants was inhibited by adenosine or cAMP analogs that permeate the cell membrane. Moreover, inhibition of PKA but not PKC, p38 MAPK, Akt, or PKG prevented the effects of cAMP analogs, suggesting the involvement of Panx1 phosphorylation by PKA. Accordingly, alanine substitution of T302 or S328, two putative PKA phosphorylation sites, prevented the inhibitory effect of cAMP analogs. Moreover, phosphomimetic mutation of either T302 or S328 to aspartate prevented the mechanical stretch-induced activation of Panx1 channels. A molecular dynamics simulation revealed that T302 and S328 are located in the water–lipid interphase near the lateral tunnel of the intracellular region, suggesting that their phosphorylation could promote conformational changes in lateral tunnels. Thus, Panx1 phosphorylation via PKA could be modulated by G protein-coupled receptors associated with the Gs subunit.
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- 2020
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14. Innovative Three-Step Microwave-Promoted Synthesis of N-Propargyltetrahydroquinoline and 1,2,3-Triazole Derivatives as a Potential Factor Xa (FXa) Inhibitors: Drug Design, Synthesis, and Biological Evaluation
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Fabián Santana-Romo, Carlos F. Lagos, Yorley Duarte, Francisco Castillo, Yanina Moglie, Miguel A. Maestro, Nitin Charbe, and Flavia C. Zacconi
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factor xa inhibitors ,microwave-assisted synthesis ,n-propargyltetrahydroquinoline ,1,2,3-triazole ,cell viability assay ,coagulation parameters ,Organic chemistry ,QD241-441 - Abstract
The coagulation cascade is the process of the conversion of soluble fibrinogen to insoluble fibrin that terminates in production of a clot. Factor Xa (FXa) is a serine protease involved in the blood coagulation cascade. Moreover, FXa plays a vital role in the enzymatic sequence which ends with the thrombus production. Thrombosis is a common causal pathology for three widespread cardiovascular syndromes: acute coronary syndrome (ACS), venous thromboembolism (VTE), and strokes. In this research a series of N-propargyltetrahydroquinoline and 1,2,3-triazole derivatives as a potential factor Xa (FXa) inhibitor were designed, synthesized, and evaluated for their FXa inhibitor activity, cytotoxicity activity and coagulation parameters. Rational design for the desired novel molecules was performed through protein-ligand complexes selection and ligand clustering. The microwave-assisted synthetic strategy of selected compounds was carried out by using Ullmann-Goldberg, N-propargylation, Mannich addition, Friedel-Crafts, and 1,3-dipolar cycloaddition type reactions under microwave irradiation. The microwave methodology proved to be an efficient way to obtain all novel compounds in high yields (73−93%). Furthermore, a thermochemical analysis, optimization and reactivity indexes such as electronic chemical potential (µ), chemical hardness (η), and electrophilicity (ω) were performed to understand the relationship between the structure and the energetic behavior of all the series. Then, in vitro analysis showed that compounds 27, 29−31, and 34 exhibited inhibitory activity against FXa and the corresponding half maximal inhibitory concentration (IC50) values were calculated. Next, a cell viability assay in HEK293 and HepG2 cell lines, and coagulation parameters (anti FXa, Prothrombin time (PT), activated Partial Thromboplastin Time (aPTT)) of the most active novel molecules were performed to determine the corresponding cytotoxicity and possible action on clotting pathways. The obtained results suggest that compounds 27 and 29 inhibited FXa targeting through coagulation factors in the intrinsic and extrinsic pathways. However, compound 34 may target coagulation FXa mainly by the extrinsic and common pathway. Interestingly, the most active compounds in relation to the inhibition activity against FXa and coagulation parameters did not show toxicity at the performed coagulation assay concentrations. Finally, docking studies confirmed the preferential binding mode of N-propargyltetrahydroquinoline and 1,2,3-triazole derivatives inside the active site of FXa.
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- 2020
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15. Synthesis of Bistetrahydroquinolines as Potential Anticholinesterasic Agents by Double Diels-Alder Reactions
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Natalia Valdés, Jans Alzate-Morales, Luis Astudillo, Yorley Duarte, and Margarita Gutiérrez
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bistetrahydroquinolines ,Diels-Alder reaction ,AChE and BuChE inhibitors ,molecular docking ,MM-GBSA ,Organic chemistry ,QD241-441 - Abstract
The tetrahydroquinoline ring system is a unit found in many biologically active natural products and pharmacologically relevant therapeutic agents. A new series of bistetrahydroquinolines (bis-THQs) was synthesized using imino Diels-Alder reactions between dialdehydes, anilines and N-vinyl-2-pyrrolidone (NVP). The notable features of this procedure are mild reaction conditions, greater selectivity and good yields of products. In addition, the inhibitory activity against acetylcholinesterase (AChE) and butyrylcholinesterase (BuChE) of some selected derivatives is reported. The feasible binding modes of these active compounds, within AChE and BuChE binding sites, were predicted by molecular docking experiments and their binding affinity was estimated by means of free energy calculations through the MM-GBSA approximation.
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- 2013
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16. X-ray and Hydrogen-bonding Properties of 1-((1H-benzotriazol-1-yl)methyl)naphthalen-2-ol
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Jaime Ríos-Motta, Guillermo Zaragoza, Diego González-Salas, Yorley Duarte, and Augusto Rivera
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Mannich bases ,Benzotriazole ,Intra-intermolecular hydrogen bond ,1-((1H-benzotriazol-1-yl)methyl)naphthalen-2-ol ,Single crystal X-ray diffraction ,Organic chemistry ,QD241-441 - Abstract
The solid state structure of 1-((1H-benzotriazol-1-yl)methyl)naphthalen-2-ol, C17H13N3O, shows that this Mannich base crystallizes forming intermolecular N···HO hydrogen bonds, rather than intramolecular ones. Factors contributing to this choice of hydrogen-bonding mode are discussed. The compound crystallizes in the monoclinic system, P21/c space group, with lattice constants: a = 11.7934(9) Å, b = 14.3002(14) Å, c = 8.4444(8) Å, β = 106.243(5) deg, V = 1367.3(2) Å3, Z = 4, F(000) = 576, R1 = 6.96%, wR2 = 11.4%.
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- 2009
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17. Unnexins: Homologs of innexin proteins in Trypanosomatidae parasites
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Juan Güiza, Yorley Duarte, Valeria Márquez-Miranda, Maximiliano Rojas, Jorge González, Fernando D. González-Nilo, Javiera Arriagada, José L. Vega, Camila Gutiérrez, Aníbal García, Juan C. Sáez, and Melissa Alegría-Arcos
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biology ,Probenecid ,Physiology ,Chemistry ,Trypanosoma cruzi ,Protein subunit ,Clinical Biochemistry ,Connexin ,Cell Biology ,Innexin ,Pannexin ,biology.organism_classification ,Pentapeptide repeat ,Connexins ,Cell biology ,Membrane topology ,Animals ,Trypanosomatina ,Parasites ,Histone octamer - Abstract
Large-pore channels, including those formed by connexin, pannexin, innexin proteins, are part of a broad family of plasma membrane channels found in vertebrates and invertebrates, which share topology features. Despite their relevance in parasitic diseases such as Chagas and malaria, it was unknown whether these large-pore channels are present in unicellular organisms. We identified 14 putative proteins in Trypanosomatidae parasites as presumptive homologs of innexin proteins. All proteins possess the canonical motif of the innexin family, a pentapeptide YYQWV, and 10 of them share a classical membrane topology of large-pore channels. A sequence similarity network analysis confirmed their closeness to innexin proteins. A bioinformatic model showed that a homolog of Trypanosoma cruzi (T. cruzi) could presumptively form a stable octamer channel with a highly positive electrostatic potential in the internal cavities and extracellular entrance due to the notable predominance of residues such as Arg or Lys. In vitro dye uptake assays showed that divalent cations-free solution increases YO-PRO-1 uptake and hyperosmotic stress increases DAPI uptake in epimastigotes of T. cruzi. Those effects were sensitive to probenecid. Furthermore, probenecid reduced the proliferation and transformation of T. cruzi. Moreover, probenecid or carbenoxolone increased the parasite sensitivity to antiparasitic drugs commonly used in therapy against Chagas. Our study suggests the existence of innexin homologs in unicellular organisms, which could be protein subunits of new large-pore channels in unicellular organisms.
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- 2021
18. Toward the cholinesterase inhibition potential of TADDOL derivatives: Seminal biological and computational studies
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Andrea R. Costantino, Nitin Charbe, Yorley Duarte, Margarita Gutiérrez, Ady Giordano, Parteek Prasher, Kamal Dua, Sandra Mandolesi, and Flavia C. Zacconi
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0304 Medicinal and Biomolecular Chemistry, 1115 Pharmacology and Pharmaceutical Sciences ,Molecular Docking Simulation ,Structure-Activity Relationship ,Alzheimer Disease ,Medicinal & Biomolecular Chemistry ,Butyrylcholinesterase ,Drug Discovery ,Acetylcholinesterase ,Pharmaceutical Science ,Humans ,Cholinesterase Inhibitors ,Pesticides - Abstract
Alzheimer's disease (AD) is a degenerative neurological disease characterized by gradual loss of cognitive skills and memory. The exact pathogenesis involved still remains unrevealed, but several studies indicate the involvement of an array of different enzymes, underlining the multifactorial character of the disease. Inhibition of these enzymes is therefore a powerful approach in the development of AD treatments, with promising candidates, including acetylcholinesterase (AChE), butyrylcholinesterase (BuChE), and monoamine oxidase. Interestingly, AChE is the target of a major pesticide family (organophosphates), with several reports indicating an intersection between the pesticide's activity and AD. In this study, various TADDOL derivatives were synthesized and their in vitro activities as AChE/BuChE inhibitors as well as their antioxidant activities were studied. Molecular modeling studies revealed the capability of TADDOL derivatives to bind to AChE and induce inhibition, especially compounds 2b and 3c furnishing IC
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- 2022
19. Endogenous pannexin1 channels form functional intercellular cell-cell channels with characteristic voltage-dependent properties
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Nicolás Palacios-Prado, Paola A. Soto, Ximena López, Eun Ju Choi, Valeria Marquez-Miranda, Maximiliano Rojas, Yorley Duarte, Jinu Lee, Fernando D. González-Nilo, and Juan C. Sáez
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Mammals ,Multidisciplinary ,Animals ,Humans ,Nerve Tissue Proteins ,Connexins ,Ion Channels - Abstract
The occurrence of intercellular channels formed by pannexin1 has been challenged for more than a decade. Here, we provide an electrophysiological characterization of exogenous human pannexin1 (hPanx1) cell–cell channels expressed in HeLa cells knocked out for connexin45. The observed hPanx1 cell–cell channels show two phenotypes: O-state and S-state. The former displayed low transjunctional voltage (Vj) sensitivity and single-channel conductance of ∼175 pS, with a substate of ∼35 pS; the latter showed a peculiar dynamic asymmetry in Vj dependence and single-channel conductance identical to the substate conductance of the O-state. S-state hPanx1 cell–cell channels were also identified between TC620 cells, a human oligodendroglioma cell line that endogenously expresses hPanx1. In these cells, dye and electrical coupling increased with temperature and were strongly reduced after hPanx1 expression was knocked down by small interfering RNA or inhibited with Panx1 mimetic inhibitory peptide. Moreover, cell–cell coupling was augmented when hPanx1 levels were increased with a doxycycline-inducible expression system. Application of octanol, a connexin gap junction (GJ) channel inhibitor, was not sufficient to block electrical coupling between HeLa KO Cx45-hPanx1 or TC620 cell pairs. In silico studies suggest that several arginine residues inside the channel pore may be neutralized by hydrophobic interactions, allowing the passage of DAPI, consistent with dye coupling observed between TC620 cells. These findings demonstrate that endogenously expressed hPanx1 forms intercellular cell–cell channels and their unique properties resemble those described in innexin-based GJ channels. Since Panx1 is ubiquitously expressed, finding conditions to recognize Panx1 cell–cell channels in different cell types might require special attention.
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- 2022
20. Structural determinants of TRPV4 inhibition and identification of new antagonists with antiviral activity
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Gemma Pérez-Vilaró, Miguel A. Valverde, Pablo Doñate-Macian, Fanny Rubio-Moscardo, Yorley Duarte, Jonathan Canan, Fernando D. González-Nilo, and Juana Díez
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0301 basic medicine ,TRPV4 ,Xenopus ,In silico ,TRPV Cation Channels ,Computational biology ,Molecular dynamics ,Antiviral Agents ,drug discovery ,03 medical and health sciences ,Transient receptor potential channel ,Transient Receptor Potential Channels ,0302 clinical medicine ,Animals ,Humans ,structure ,Antiviral ,Binding site ,Inhibition ,Pharmacology ,Virtual screening ,Binding Sites ,Zika Virus Infection ,Drug discovery ,HC067047 ,Chemistry ,Structure ,Zika Virus ,RN1734 ,antiviral ,Small molecule ,inhibition ,molecular dynamics ,030104 developmental biology ,in silico ,Docking (molecular) ,030217 neurology & neurosurgery - Abstract
Background and purpose: The transient receptor potential vanilloid 4 (TRPV4) cation channel participates in multiple physiological processes and is also at the core of different diseases, making this channel an interesting pharmacological target with therapeutic potential. However, little is known about the structural elements governing its inhibition. Experimental approach: We have now combined in silico drug discovery and molecular dynamics simulation based on Xenopus tropicalis xTRPV4 structure with functional studies measuring cell Ca2+ influx mediated by human TRPV4 channel to characterize the binding site of known TRPV4 inhibitors and to identify novel small molecule channel modulators. Key results: We have found that the inhibitor HC067047 binds to a pocket conformed by residues from S2-S3 linker (xTRPV4-D542), S4 (xTRPV4-M583 and Y587 and S5 (xTRPV4-D609 and F613). This pocket was also used for structure-based virtual screening in the search of novel channel modulators. Forty potential hits were selected based on the lower docking scores (from ~250,000 compounds) and their effect upon TRPV4 functionally tested. Three were further analysed for stability using molecular dynamics simulation and functionally tested on TRPV4 channels carrying mutations in the binding pocket. Compound NSC151066, shown to require residue xTRPV4-M583 for its inhibitory effect, presented an IC50 of 145 nM and demonstrated to be an effective antiviral against Zika virus with a potency similar to HC067047. Conclusion and implications: Together, we propose structural insights into the inhibition of TRPV4 and how this information can be used for the design of novel channel modulators. We thank Dr. Andres Merits (University of Tartu, Estonia) for kindly providing the plasmid encoding the ZIKV with NanoLuc, Spanish Ministry of Economy and Competitiveness through grants RTI2018‐099718 (to M.A.V.) and BFU2016‐80039‐R (to J.D.), an institutional “Unidad de Excelencia María de Maeztu” CEX2018‐000792‐M and FEDER funds. F.G.‐N. thanks Fondecyt Regular projects 1170733, the US Army of USA, W911NF‐14‐1‐0520 and The Centro Interdisciplinario de Neurociencia de Valparaíso is a Millennium Institute supported by the Millennium Scientific Initiative of the Ministerio de Economía, Fomento y Turismo P029‐022‐F.
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- 2020
21. Cationic Carbosilane Dendritic Systems as Promising Anti‐Amyloid Agents in Type 2 Diabetes
- Author
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Tania Lozano-Cruz, Paula Ortega, F. Javier de la Mata, Felipe Bravo-Moraga, Sara de Pablo, Rafael Gómez, Yorley Duarte, Fernando D. González-Nilo, Gema Alcarraz-Vizán, and Anna Novials
- Subjects
Programmed cell death ,Amyloid ,Transgene ,Mice, Transgenic ,010402 general chemistry ,01 natural sciences ,Catalysis ,Islets of Langerhans ,Mice ,Protein structure ,Dendrimer ,medicine ,Animals ,Humans ,geography ,geography.geographical_feature_category ,010405 organic chemistry ,Chemistry ,Pancreatic islets ,Organic Chemistry ,Amyloidosis ,General Chemistry ,Silanes ,Islet ,Phenylbutyrates ,Islet Amyloid Polypeptide ,0104 chemical sciences ,medicine.anatomical_structure ,Diabetes Mellitus, Type 2 ,Biophysics ,Chemical chaperone - Abstract
The most common denominator of many of the neurodegenerative diseases is badly folded protein accumulation, which results in the formation of insoluble protein deposits located in different parts of the organism, causing cell death and tissue degeneration. Dendritic systems have turned out to be a promising new therapeutic approach for the treatment of these diseases due to their ability to modulate the folding of these proteins. With this perspective, and focused on type 2 diabetes (T2D), characterized by the presence of deposits containing the amyloidogenic islet amyloid polypeptide (IAPP), we demonstrate how different topologies of cationic carbosilane dendrimers inhibit the formation of insoluble protein deposits in pancreatic islets isolated from transgenic Tg-hIAPP mice. Also, the results obtained by the modification of dendritic carbosilane wedges with the chemical chaperone 4-phenylbutyric acid (4-PBA) at the focal point confirmed their potential as anti-amyloid agents with a concentration efficiency in their therapeutic action five orders of magnitude lower than that observed for free 4-PBA. Computational studies, which determined the main interaction between IAPP and dendrimers at the atomic level, support the experimental work.
- Published
- 2020
22. Microwave-Mediated Synthesis of N-allyl/Propargyl Derivatives: Enzymatic Analysis as a Potential Factor Xa (FXa) Inhibitor, Theoretical and Computational Molecular Docking
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Fabián Santana-Romo, Pharmacy, Santiago, Chile, Flavia C. Zacconi, Yorley Duarte, Miguel A. Maestro, and Francisco Castillo
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chemistry.chemical_classification ,Enzyme ,Chemistry ,Propargyl ,General Earth and Planetary Sciences ,Combinatorial chemistry ,Microwave ,General Environmental Science - Published
- 2020
23. Molecular modeling and structural analysis of some tetrahydroindazole and cyclopentanepyrazole derivatives as COX-2 inhibitors
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Karen Acosta-Quiroga, Cristian Rojas-Peña, Efraín Polo-Cuadrado, Iván Brito, Yeray A. Rodriguez-Nuñez, Yorley Duarte, Jonathan Cisterna, and Margarita Gutiérrez
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chemistry.chemical_classification ,biology ,Molecular model ,Chemistry ,General Chemical Engineering ,In silico ,Crystal structure ,Binding energy ,Active site ,General Chemistry ,Reference drug ,Tetrahydroindazole ,Molecular Docking ,Molecular dynamics ,Residue (chemistry) ,Enzyme ,Computational chemistry ,COX-2 enzyme ,Pyrazole ,Molecular dynamics simulation ,biology.protein ,QD1-999 - Abstract
In an attempt to rationalize the search for new potential anti-inflammatory compounds on the COX-2 enzyme, we carried out an in silico protocol that successfully combines the prediction of physicochemical and pharmacokinetic properties, molecular docking, molecular dynamic simulation, and free energy calculation. Starting from a small library of compounds synthesized previously, it was found that 70% of the compounds analyzed satisfy with the associated values to physicochemical principles as key evaluation parameters for the drug-likeness; all the compounds presented good gastrointestinal absorption and cerebral permeability and they showed an interaction with the Arg 106 residue of the COX-2 isoenzyme. Finally, it was obtained that compound 3ab has a binding mode, binding energy, and stability in the active site of COX-2 like the reference drug celecoxib, suggesting that this compound could become a powerful candidate in the inhibition of the COX-2 enzyme. In addition, we realized the crystallographic analysis of compounds 3j, 3r, and 3t defining the crystal parameters and the Packing interactions.
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- 2022
24. The bisphosphonate zoledronic acid is a TRPV1 channel inhibitor
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Karen Castillo, Yorley Duarte, Ignacio A. Segura, Rodrigo Meza, Carlos Ancaten, Karina Carvajal-Zamorano, Rosa Scala, Domenico Tricarico, Andres Chavez, and Ramon Latorre
- Subjects
Biophysics - Published
- 2023
25. Novel N-benzoylimidazolium ionic liquids derived from benzoic and hydroxybenzoic acids as therapeutic alternative against Biofilm-forming bacteria in skin and soft-tissue infections
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Oscar Forero-Doria, Cristóbal Parra-Cid, Whitney Venturini, Carolina Espinoza, Ramiro Araya-Maturana, Felipe Valenzuela-Riffo, Cesar Saldias, Angel Leiva, Yorley Duarte, Javier Echeverría, and Luis Guzmán
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Bacteria ,Soft Tissue Infections ,Organic Chemistry ,Ionic Liquids ,Microbial Sensitivity Tests ,Biochemistry ,Anti-Bacterial Agents ,Anti-Infective Agents ,Biofilms ,Drug Discovery ,Pseudomonas aeruginosa ,Escherichia coli ,Hydroxybenzoates ,Humans ,Molecular Biology - Abstract
The skin and soft tissue infections (SSTIs) -producing pathogens have acquired resistance to a wide range of antimicrobials, thus it is highly relevant to have new treatment alternatives. In this study, we report the synthesis, characterization, and antibacterial activity of three novel series of ionic liquids (ILs) derived from benzoic and hydroxybenzoic acids, with different lengths of the alkyl chain. The minimum inhibitory concentration (MIC) were tested in Gram-positive: Pseudomonas aeruginosa, Staphylococcus aureus, Staphylococcus epidermidis, and Streptococcus pyogenes, and Gram-negative: Acinetobacter baumannii and Escherichia coli, showing a MIC range of 0.01562-2.0 mM, with the activity varying according to the aromatic ring functionalization and the length of the alkyl chains. Regarding the antibiofilm activity, different efficacy was observed among the different ILs, some of them presenting antibiofilm activities close to 80% as in the case of those derived from syringic acid with an alkyl chain of six carbon atoms against Pseudomonas aeruginosa. Furthermore, the cell viability in HaCaT cells was determined, showing a half maximal effective concentration (EC
- Published
- 2021
26. Synthesis multicomponent based on o‐tolyl‐isocyanide; cholinesterase inhibitors and computational studies
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Lorena Camargo-Ayala, Efraín Polo-Cuadrado, Edison Osorio, Jorge Soto-Delgado, Yorley Duarte, Luis Prent-Peñaloza, and Margarita Gutiérrez
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Inorganic Chemistry ,Organic Chemistry ,Spectroscopy ,Analytical Chemistry - Published
- 2022
27. Development of a PHBV nanoparticle as a peptide vehicle for NOD1 activation
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Yorley Duarte, Juan A. Fuentes, Pablo A. Herrera, Danilo Gonzalez-Nilo, Cristian Vilos, Mauricio Cabaña-Brunod, Luis Velasquez, Carolina Otero, Felipe M. Llancalahuen, and Valeria Márquez-Miranda
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Agonist ,medicine.drug_class ,Cell Survival ,Chemistry, Pharmaceutical ,Polyesters ,Pharmaceutical Science ,Peptide ,RM1-950 ,02 engineering and technology ,macrophage ,Diaminopimelic Acid ,030226 pharmacology & pharmacy ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Drug Stability ,Nod1 Signaling Adaptor Protein ,Intracellular receptor ,NOD1 ,medicine ,Animals ,Receptor ,innate immunity ,chemistry.chemical_classification ,Drug Carriers ,PHBV ,Dose-Response Relationship, Drug ,Nod1 agonist ,General Medicine ,021001 nanoscience & nanotechnology ,Drug Liberation ,Membrane ,RAW 264.7 Cells ,chemistry ,Biophysics ,Nanoparticles ,Therapeutics. Pharmacology ,Nanocarriers ,0210 nano-technology ,Intracellular ,Research Article - Abstract
NOD1 is an intracellular receptor that, when activated, induces gene expression of pro-inflammatory factors promoting macrophages and neutrophils recruitment at the infection site. However, iE-DAP, the dipeptide agonist that promotes this receptor's activation, cannot permeate cell membranes. To develop a nanocarrier capable of achieving a high and prolonged activation over time, iE-DAP was encapsulated in nanoparticles (NPs) made of poly (3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV). The physicochemical properties, colloidal stability, encapsulation efficiency, and cellular uptake of iE-DAP-loaded PHVB NPs were analyzed. Results evidenced that physicochemical properties of iE-DAP-loaded NPs remained stable over time, and NPs were efficiently internalized into cells, a process that depends on time and concentration. Moreover, our results showed that NPs elicited a controlled cargo release in vitro, and the encapsulated agonist response was higher than its free form, suggesting the possibility of activating intracellular receptors triggering an immune response through the release of NOD1 agonist.
- Published
- 2021
28. PLIDflow: an open-source workflow for the online analysis of protein–ligand docking using galaxy
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Oswaldo Trelles, Eugenia Ulzurrun, Esteban Pérez-Wohlfeil, Fernando D. González-Nilo, and Yorley Duarte
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Statistics and Probability ,Computer science ,Ligands ,computer.software_genre ,01 natural sciences ,Biochemistry ,Molecular Docking Simulation ,Workflow ,03 medical and health sciences ,0103 physical sciences ,Binding site ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,010304 chemical physics ,Ligand ,Drug discovery ,Proteins ,Protein engineering ,Computer Science Applications ,Computational Mathematics ,Computational Theory and Mathematics ,Protein–ligand docking ,Docking (molecular) ,Target protein ,Data mining ,computer ,Software ,Protein Binding - Abstract
Motivation Molecular docking is aimed at predicting the conformation of small-molecule (ligands) within an identified binding site (BS) in a target protein (receptor). Protein–ligand docking plays an important role in modern drug discovery and biochemistry for protein engineering. However, efficient docking analysis of proteins requires prior knowledge of the BS, which is not always known. The process which covers BS identification and protein–ligand docking usually requires the combination of different programs, which require several input parameters. This is furtherly aggravated when factoring in computational demands, such as CPU-time. Therefore, these types of simulation experiments can become a complex process for researchers without a background in computer sciences. Results To overcome these problems, we have designed an automatic computational workflow (WF) to process protein–ligand complexes, which runs from the identification of the possible BSs positions to the prediction of the experimental binding modes and affinities of the ligand. This open-access WF runs under the Galaxy platform that integrates public domain software. The results of the proposed method are in close agreement with state-of-the-art docking software. Availability and implementation Software is available at: https://pistacho.ac.uma.es/galaxy-bitlab. Contact euv@uma.es Supplementary information Supplementary data are available at Bioinformatics online.
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- 2020
29. Experimental and Theoretical Approaches in the Study of Phenanthroline‐Tetrahydroquinolines for Alzheimer's Disease
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Jans Alzate-Morales, Yorley Duarte, Rocío Álvarez, Jorge Soto-Delgado, and Margarita Gutiérrez
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tetrahydroquinolines ,Phenanthroline ,Substituent ,Activation energy ,010402 general chemistry ,01 natural sciences ,lcsh:Chemistry ,chemistry.chemical_compound ,Pyridine ,density functional theory ,Cholinesterase ,biology ,Full Paper ,010405 organic chemistry ,Biological activity ,General Chemistry ,acetylcholinesterase ,Full Papers ,Combinatorial chemistry ,Acetylcholinesterase ,Alzheimer's disease imino-Diels-Alder ,0104 chemical sciences ,chemistry ,lcsh:QD1-999 ,Yield (chemistry) ,biology.protein - Abstract
The imino‐Diels‐Alder reaction is one of the most common strategies in organic chemistry and is an important tool for providing a broad spectrum of biologically active heterocyclic systems. A combined theoretical and experimental study of the imino‐Diels‐Alder reaction is described. The new phenanthroline‐tetrahydroquinolines were evaluated as cholinesterase inhibitors. Their cytotoxicity in human neuroblastoma SH‐SY5Y cells was also evaluated. The theoretical results suggest that compounds formation in stages can be explained by endo cycloadducts under the established reaction conditions, thereby confirming experimental results obtained for percentage yield. These results allowed us to establish that pyridine substituent remarkably influences activation energy and reaction yield, as well as in acetylcholinesterase (AChE) activity. Among these derivatives, compounds with 4‐pyridyl and 4‐nitrophenyl showed favorable AChE activity and proved to be non‐cytotoxic.
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- 2019
30. Novel Coumarin‐Quinoline Hybrids: Design of Multitarget Compounds for Alzheimer's Disease
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Camila Muñoz-Gutierrez, Jans Alzate-Morales, Lourdes Santana, Rocío Álvarez, Margarita Gutiérrez, Eugenio Uriarte, Maria João Matos, Yorley Duarte, André Fonseca, and Francisco Adasme-Carreño
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chemistry.chemical_classification ,chemistry.chemical_compound ,Residue (chemistry) ,Enzyme ,chemistry ,Hydrogen bond ,Quinoline ,Iron Chelating Agents ,General Chemistry ,Selectivity ,Coumarin ,Combinatorial chemistry ,Neuroprotection - Abstract
Alzheimer's disease (AD) is the most prevalent neurodegenerative disease, presenting the most devastating consequences on human health and life quality. Coumarin-quinoline hybrids were synthesized following a very efficient and versatile strategy. Small structural variations contributed to dual acetyl/butyrylcholinesterases (AChE/BuChE) activity or selectivity towards one of these enzymes. In addition, some of the studied compounds are interesting iron chelators, presenting a tendency to be neuroprotective. Moreover, the compounds are not cytotoxic for SH-SY5Y neuroblastoma cells. Compound 9c proved to be the most interesting compound of the studied series. This compound is selective against AChE and proved to be an excellent iron chelating agent (iron chelation at 100 μM=72.87%). Molecular docking studies were performed to establish the nature of the interaction between the studied compounds and the binding pockets, leading to a rationalization of structure–activity relationships. Compound 9c forms a well-defined π-stacking interaction with Phe330 and interacts with Tyr121 residue via a hydrogen bond, while the inactive compounds cannot establish these interactions. Important preliminary results against different targets, as well as some structure–activity relationships, were concluded from the experimental results.
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- 2019
31. Anti-parasitic drugs modulate the non-selective channels formed by connexins or pannexins
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Yorley Duarte, Javiera Arriagada, Juan C. Sáez, Luis Rodríguez, Camila Gutiérrez, José L. Vega, and Juan Güiza
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0301 basic medicine ,Anti parasitic ,030231 tropical medicine ,Connexin ,Parasitic infection ,Connexins ,Cell membrane ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Animals ,Humans ,Parasites ,Molecular Biology ,biology ,Antiparasitic Agents ,Chemistry ,Host (biology) ,Gap Junctions ,Pannexin ,biology.organism_classification ,Cell biology ,030104 developmental biology ,medicine.anatomical_structure ,Cytoplasm ,Molecular Medicine ,Protozoa - Abstract
The proteins connexins, innexins, and pannexins are the subunits of non-selective channels present in the cell membrane in vertebrates (connexins and pannexins) and invertebrates (innexins). These channels allow the transfer of ions and molecules across the cell membrane or, and in many cases, between the cytoplasm of neighboring cells. These channels participate in various physiological processes, particularly under pathophysiological conditions, such as bacterial, viral, and parasitic infections. Interestingly, some anti-parasitic drugs also block connexin- or pannexin-formed channels. Their effects on host channels permeable to molecules that favor parasitic infection can further explain the anti-parasitic effects of some of these compounds. In this review, the effects of drugs with known anti-parasitic activity that modulate non-selective channels formed by connexins or pannexins are discussed. Previous studies that have reported the presence of these proteins in worms, ectoparasites, and protozoa that cause parasitic infections have also been reviewed.
- Published
- 2021
32. Different Classes of Antidepressants Inhibit the Rat α7 Nicotinic Acetylcholine Receptor by Interacting within the Ion Channel: A Functional and Structural Study
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Maximiliano Rojas, Edwin G. Pérez, Fernando D. González-Nilo, Jesús García-Colunga, Jonathan Canan, and Yorley Duarte
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0301 basic medicine ,alpha7 Nicotinic Acetylcholine Receptor ,hippocampus ,Pharmaceutical Science ,biological activity ,Molecular Dynamics Simulation ,Imipramine ,Ion Channels ,Article ,Choline ,Analytical Chemistry ,lcsh:QD241-441 ,Structure-Activity Relationship ,03 medical and health sciences ,0302 clinical medicine ,lcsh:Organic chemistry ,Interneurons ,Drug Discovery ,mental disorders ,medicine ,Animals ,Homology modeling ,Physical and Theoretical Chemistry ,Ion channel ,Acetylcholine receptor ,Bupropion ,Chemistry ,musculoskeletal, neural, and ocular physiology ,Organic Chemistry ,Biological activity ,Antidepressive Agents ,Rats ,Molecular Docking Simulation ,Electrophysiology ,030104 developmental biology ,Nicotinic agonist ,nervous system ,in silico studies ,Structural Homology, Protein ,Chemistry (miscellaneous) ,antidepressants ,Biophysics ,Thermodynamics ,Molecular Medicine ,α7 nicotinic acetylcholine receptors ,allosteric modulators ,Ion Channel Gating ,030217 neurology & neurosurgery ,medicine.drug - Abstract
Several antidepressants inhibit nicotinic acetylcholine receptors (nAChRs) in a non-competitive and voltage-dependent fashion. Here, we asked whether antidepressants with a different structure and pharmacological profile modulate the rat α7 nAChR through a similar mechanism by interacting within the ion-channel. We applied electrophysiological (recording of the ion current elicited by choline, ICh, which activates α7 nAChRs from rat CA1 hippocampal interneurons) and in silico approaches (homology modeling of the rat α7 nAChR, molecular docking, molecular dynamics simulations, and binding free energy calculations). The antidepressants inhibited ICh with the order: norfluoxetine ~ mirtazapine ~ imipramine <, bupropion ~ fluoxetine ~ venlafaxine ~ escitalopram. The constructed homology model of the rat α7 nAChR resulted in the extracellular vestibule and the channel pore is highly negatively charged, which facilitates the permeation of cations and the entrance of the protonated form of antidepressants. Molecular docking and molecular dynamics simulations were carried out within the ion−channel of the α7 nAChR, revealing that the antidepressants adopt poses along the receptor channel, with slightly different binding-free energy values. Furthermore, the inhibition of ICh and free energy values for each antidepressant-receptor complex were highly correlated. Thus, the α7 nAChR is negatively modulated by a variety of antidepressants interacting in the ion−channel.
- Published
- 2021
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33. Stretch-Induced Activation of Pannexin 1 Channels Can Be Prevented by PKA-Dependent Phosphorylation
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Rosalba Escamilla, Fernando D. González-Nilo, Agustín Martínez, Paola Fernández, Yorley Duarte, Nicolás Palacios-Prado, Juan C. Sáez, and Ximena López
- Subjects
Dye uptake ,Models, Molecular ,Adenosine ,Protein Conformation ,Mechanotransduction, Cellular ,Connexins ,Cell membrane ,lcsh:Chemistry ,Palps ,Protein phosphorylation ,Phosphorylation ,lcsh:QH301-705.5 ,Spectroscopy ,Probenecid ,Chemistry ,General Medicine ,Pannexin ,Computer Science Applications ,medicine.anatomical_structure ,dye uptake ,adenosine ,Ion Channel Gating ,Intracellular ,medicine.drug ,Cell signaling ,Nerve Tissue Proteins ,Catalysis ,Article ,Inorganic Chemistry ,Structure-Activity Relationship ,Pannexins ,cAMP ,medicine ,Humans ,Physical and Theoretical Chemistry ,Molecular Biology ,Protein kinase C ,Site-directed mutation ,Organic Chemistry ,Cyclic AMP-Dependent Protein Kinases ,protein phosphorylation ,lcsh:Biology (General) ,lcsh:QD1-999 ,Biophysics ,Mutagenesis, Site-Directed ,CAMP ,site-directed mutation ,HeLa Cells - Abstract
Pannexin 1 channels located in the cell membrane are permeable to ions, metabolites, and signaling molecules. While the activity of these channels is known to be modulated by phosphorylation on T198, T308, and S206, the possible involvement of other putative phosphorylation sites remains unknown. Here, we describe that the activity of Panx1 channels induced by mechanical stretch is reduced by adenosine via a PKA-dependent pathway. The mechanical stretch-induced activity&mdash, measured by changes in DAPI uptake&mdash, of Panx1 channels expressed in HeLa cell transfectants was inhibited by adenosine or cAMP analogs that permeate the cell membrane. Moreover, inhibition of PKA but not PKC, p38 MAPK, Akt, or PKG prevented the effects of cAMP analogs, suggesting the involvement of Panx1 phosphorylation by PKA. Accordingly, alanine substitution of T302 or S328, two putative PKA phosphorylation sites, prevented the inhibitory effect of cAMP analogs. Moreover, phosphomimetic mutation of either T302 or S328 to aspartate prevented the mechanical stretch-induced activation of Panx1 channels. A molecular dynamics simulation revealed that T302 and S328 are located in the water&ndash, lipid interphase near the lateral tunnel of the intracellular region, suggesting that their phosphorylation could promote conformational changes in lateral tunnels. Thus, Panx1 phosphorylation via PKA could be modulated by G protein-coupled receptors associated with the Gs subunit.
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- 2020
34. Contribution of non-selective membrane channels and receptors in epilepsy
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Yorley Duarte, Iván D. Bravo-Tobar, Juan C. Sáez, Claudia García-Rodríguez, and Luis C. Barrio
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Neurons ,Pharmacology ,TRPV4 ,Epilepsy ,Chemistry ,Purinergic receptor ,TRPV1 ,Nerve Tissue Proteins ,medicine.disease ,Connexins ,Transient receptor potential channel ,Transient Receptor Potential Channels ,Seizures ,TRPM ,medicine ,Humans ,Pharmacology (medical) ,Microglia ,Neuroscience ,TRPC ,Ionotropic effect - Abstract
Overcoming refractory epilepsy's resistance to the combination of antiepileptic drugs (AED), mitigating side effects, and preventing sudden unexpected death in epilepsy are critical goals for therapy of this disorder. Current therapeutic strategies are based primarily on neurocentric mechanisms, overlooking the participation of astrocytes and microglia in the pathophysiology of epilepsy. This review is focused on a set of non-selective membrane channels (permeable to ions and small molecules), including channels and ionotropic receptors of neurons, astrocytes, and microglia, such as: the hemichannels formed by Cx43 and Panx1; the purinergic P2X7 receptors; the transient receptor potential vanilloid (TRPV1 and TRPV4) channels; calcium homeostasis modulators (CALHMs); transient receptor potential canonical (TRPC) channels; transient receptor potential melastatin (TRPM) channels; voltage-dependent anion channels (VDACs) and volume-regulated anion channels (VRACs), which all have in common being activated by epileptic activity and the capacity to exacerbate seizure intensity. Specifically, we highlight evidence for the activation of these channels/receptors during epilepsy including neuroinflammation and oxidative stress, discuss signaling pathways and feedback mechanisms, and propose the functions of each of them in acute and chronic epilepsy. Studying the role of these non-selective membrane channels in epilepsy and identifying appropriate blockers for one or more of them could provide complementary therapies to better alleviate the disease.
- Published
- 2022
35. Analysis of SARS-CoV-2 ORF3a structure reveals chloride binding sites
- Author
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Miguel Holmgren, Fernando D. González-Nilo, Ignacio Diaz-Franulic, Maximiliano Rojas, Valeria Márquez-Miranda, Yorley Duarte, and Raul E. Cachau
- Subjects
chemistry.chemical_compound ,Transmembrane domain ,Molecular dynamics ,Membrane ,chemistry ,Tetramer ,Dimer ,Beta sheet ,Biophysics ,Protomer ,Ion channel ,Article - Abstract
SARS-CoV-2 ORF3a is believed to form ion channels, which may be involved in the modulation of virus release, and has been implicated in various cellular processes like the up-regulation of fibrinogen expression in lung epithelial cells, downregulation of type 1 interferon receptor, caspase-dependent apoptosis, and increasing IFNAR1 ubiquitination. ORF3a assemblies as homotetramers, which are stabilized by residue C133. A recent cryoEM structure of a homodimeric complex of ORF3a has been released. A lower-resolution cryoEM map of the tetramer suggests two dimers form it, arranged side by side. The dimer’s cryoEM structure revealed that each protomer contains three transmembrane helices arranged in a clockwise configuration forming a six helices transmembrane domain. This domain’s potential permeation pathway has six constrictions narrowing to about 1 Å in radius, suggesting the structure solved is in a closed or inactivated state. At the cytosol end, the permeation pathway encounters a large and polar cavity formed by multiple beta strands from both protomers, which opens to the cytosolic milieu. We modeled the tetramer following the arrangement suggested by the low-resolution tetramer cryoEM map. Molecular dynamics simulations of the tetramer embedded in a membrane and solvated with 0.5 M of KCl were performed. Our simulations show the cytosolic cavity is quickly populated by both K+ and Cl-, yet with different dynamics. K+ ions moved relatively free inside the cavity without forming proper coordination sites. In contrast, Cl- ions enter the cavity, and three of them can become stably coordinated near the intracellular entrance of the potential permeation pathway by an inter-subunit network of positively charged amino acids. Consequently, the central cavity’s electrostatic potential changed from being entirely positive at the beginning of the simulation to more electronegative at the end.
- Published
- 2020
36. Novel TRPV1 Channel Agonists With Faster and More Potent Analgesic Properties Than Capsaicin
- Author
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Javier Cáceres, Ignacio Diaz-Franulic, Fernando D. González-Nilo, Yorley Duarte, Pedro Olivares, Romina V. Sepúlveda, Diego Arriagada, and Jimmy Stehberg
- Subjects
0301 basic medicine ,Agonist ,von frey ,medicine.drug_class ,Analgesic ,TRPV1 ,Pharmacology ,capsaicin ,drug discovery ,03 medical and health sciences ,Transient receptor potential channel ,chemistry.chemical_compound ,0302 clinical medicine ,Desensitization (telecommunications) ,medicine ,Pharmacology (medical) ,Original Research ,allodynia ,transient receptor potential vanilloid 1 channels ,lcsh:RM1-950 ,analgesic ,Electrophysiology ,030104 developmental biology ,Allodynia ,lcsh:Therapeutics. Pharmacology ,chemistry ,Capsaicin ,030220 oncology & carcinogenesis ,carrageenan ,lipids (amino acids, peptides, and proteins) ,medicine.symptom - Abstract
Indexación: Scopus. The transient receptor potential vanilloid 1 (TRPV1) ion channel is a member of the family of Transient Receptor Potential (TRP) channels that acts as a molecular detector of noxious signals in primary sensory neurons. Activated by capsaicin, heat, voltage and protons, it is also well known for its desensitization, which led to the medical use of topically applied TRPV1 agonist capsaicin for its long-lasting analgesic effects. Here we report three novel small molecules, which were identified using a Structure-Based Virtual Screening for TRPV1 from the ZINC database. The three compounds were tested using electrophysiological assays, which confirmed their capsaicin-like agonist activity. von Frey filaments were used to measure the analgesic effects of the compounds applied topically on tactile allodynia induced by intra-plantar carrageenan. All compounds had anti-nociceptive activity, but two of them showed faster and longer lasting analgesic effects than capsaicin. The present results suggest that TRPV1 agonists different from capsaicin could be used to develop topical analgesics with faster onset and more potent effects. © Copyright © 2020 Duarte, Cáceres, Sepúlveda, Arriagada, Olivares, Díaz-Franulic, Stehberg and González-Nilo. https://www.frontiersin.org/articles/10.3389/fphar.2020.01040/full
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- 2020
37. Antimicrobial properties of novel ionic liquids derived from imidazolium cation with phenolic functional groups
- Author
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Ramiro Araya-Maturana, Cristóbal Parra-Cid, Luis Guzmán, Tewodros Asefa, Oscar Forero-Doria, Carlos Peña-Varas, Etiennette Guerrero-Muñoz, Yorley Duarte, Luz Stella Nerio, Ricardo I. Castro, Efraín Polo-Cuadrado, Javier Echeverría, and David Ramírez
- Subjects
Staphylococcus aureus ,Ionic Liquids ,Microbial Sensitivity Tests ,Molecular Dynamics Simulation ,medicine.disease_cause ,Biochemistry ,Structure-Activity Relationship ,chemistry.chemical_compound ,Pseudomona aeruginosa ,Phenols ,Cations ,Drug Discovery ,Escherichia coli ,medicine ,Molecular Biology ,Dose-Response Relationship, Drug ,Molecular Structure ,Organic Chemistry ,Imidazoles ,Antimicrobial ,Combinatorial chemistry ,Anti-Bacterial Agents ,chemistry ,Mic values ,Pseudomonas aeruginosa ,Ionic liquid ,Antibacterial activity - Abstract
Bacterial infections are nowadays among the major threats to public health worldwide. Thus, there is an urgent and increased need for new antimicrobial agents. As a result, the exploration of the antimicrobial properties of different substances including ionic liquids (ILs) has recently attracted great attention. The present work is aimed at evaluating how the addition of halogens and hydrophobic substituents on alkylimidazolium units of ILs as well as the increase in their chain lengths affects the antimicrobial properties of such ILs. After their synthesis, the antibacterial activities of these compounds against Pseudomona aeruginosa, Escherichia coli, and Staphylococcus aureus are determined by measuring their minimal inhibitory concentrations (MICs). Key features in ILs-membrane interactions are also studied using long-term all-atom molecular dynamics simulations (MDs). The results show that these ILs have good antibacterial activity against S. aureus, E. coli, and P. aeruginosa, with MIC values range from7.81 to 62.50 μM. The antimicrobial property of tert-butyl N-methylphenolimidazolium salts (denoted as 8b and 8c) is particularly better with MIC values of 7.81 μM. The antibacterial efficacy is also found to depend on the alkyl chain length and substituents on the phenolic ring. Finally, MDs done for ILs in a phosphatidylcholine (POPC) bilayer show key features in the mechanism of IL-induced membrane disruption, where the ILs are inserted as clusters into one side of the bilayer until saturation is reached. This insertion increases "leaflet strain" up to critical threshold, likely triggering the morphological disruption of the membranes in the microbes.
- Published
- 2021
38. Integration of target discovery, drug discovery and drug delivery: A review on computational strategies
- Author
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Yorley Duarte, Matthieu J. Miossec, Valeria Márquez-Miranda, and Fernando D. González-Nilo
- Subjects
Emerging technologies ,Process (engineering) ,Drug discovery ,Biomedical Engineering ,Medicine (miscellaneous) ,Computational Biology ,Bioengineering ,Genomics ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Data science ,0104 chemical sciences ,Identification (information) ,ComputingMethodologies_PATTERNRECOGNITION ,Drug Delivery Systems ,Targeted drug delivery ,Cheminformatics ,Drug delivery ,Drug Discovery ,Exome Sequencing ,Humans ,0210 nano-technology ,Genome-Wide Association Study - Abstract
Most of the computational tools involved in drug discovery developed during the 1980s were largely based on computational chemistry, quantitative structure-activity relationship (QSAR) and cheminformatics. Subsequently, the advent of genomics in the 2000s gave rise to a huge number of databases and computational tools developed to analyze large quantities of data, through bioinformatics, to obtain valuable information about the genomic regulation of different organisms. Target identification and validation is a long process during which evidence for and against a target is accumulated in the pursuit of developing new drugs. Finally, the drug delivery system appears as a novel approach to improve drug targeting and releasing into the cells, leading to new opportunities to improve drug efficiency and avoid potential secondary effects. In each area: target discovery, drug discovery and drug delivery, different computational strategies are being developed to accelerate the process of selection and discovery of new tools to be applied to different scientific fields. Research on these three topics is growing rapidly, but still requires a global view of this landscape to detect the most challenging bottleneck and how computational tools could be integrated in each topic. This review describes the current state of the art in computational strategies for target discovery, drug discovery and drug delivery and how these fields could be integrated. Finally, we will discuss about the current needs in these fields and how the continuous development of databases and computational tools will impact on the improvement of those areas. This article is categorized under: Therapeutic Approaches and Drug Discovery > Emerging Technologies Therapeutic Approaches and Drug Discovery > Nanomedicine for Infectious Disease Nanotechnology Approaches to Biology > Nanoscale Systems in Biology.
- Published
- 2017
39. Synthesis of Bistetrahydroquinolines as Potential Anticholinesterasic Agents by Double Diels-Alder Reactions
- Author
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Yorley Duarte, Luis Astudillo, Margarita Gutiérrez, Jans Alzate-Morales, and Natalia Valdés
- Subjects
Stereochemistry ,Pharmaceutical Science ,bistetrahydroquinolines ,Molecular Docking Simulation ,Article ,Analytical Chemistry ,lcsh:QD241-441 ,chemistry.chemical_compound ,lcsh:Organic chemistry ,AChE and BuChE inhibitors ,Catalytic Domain ,Drug Discovery ,Animals ,Humans ,Diels-Alder reaction ,molecular docking ,MM-GBSA ,Physical and Theoretical Chemistry ,Binding site ,Butyrylcholinesterase ,Diels–Alder reaction ,Cycloaddition Reaction ,Drug discovery ,Organic Chemistry ,Biological activity ,Acetylcholinesterase ,chemistry ,Chemistry (miscellaneous) ,Quinolines ,Molecular Medicine ,Thermodynamics ,Cholinesterase Inhibitors ,Selectivity ,Protein Binding - Abstract
The tetrahydroquinoline ring system is a unit found in many biologically active natural products and pharmacologically relevant therapeutic agents. A new series of bistetrahydroquinolines (bis-THQs) was synthesized using imino Diels-Alder reactions between dialdehydes, anilines and N-vinyl-2-pyrrolidone (NVP). The notable features of this procedure are mild reaction conditions, greater selectivity and good yields of products. In addition, the inhibitory activity against acetylcholinesterase (AChE) and butyrylcholinesterase (BuChE) of some selected derivatives is reported. The feasible binding modes of these active compounds, within AChE and BuChE binding sites, were predicted by molecular docking experiments and their binding affinity was estimated by means of free energy calculations through the MM-GBSA approximation.
- Published
- 2013
40. Synthesis and Study of a Selected Series of Amides with the Coumarin Scaffold for the Treatment of Alzheimer's Disease
- Author
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Lourdes Santana, Fernanda Borges, André Fonseca, Maria João Matos, Eugenio Uriarte, Yorley Duarte, Margarita Gutiérrez, and Luis Astudillo
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chemistry.chemical_classification ,Scaffold ,Antioxidant ,medicine.medical_treatment ,Coumarin ,Antimicrobial ,Acetylcholinesterase ,Combinatorial chemistry ,chemistry.chemical_compound ,Enzyme ,chemistry ,Biochemistry ,medicine ,Moiety ,Acetylcholine ,medicine.drug - Abstract
Due to the synthetic accessibility of different substituted coumarins and their biological properties, these heterocyclic compounds play an important role in the field of Medicinal Chemistry. In fact, coumarins have been previously described as anticancer, antiviral, anti-inflammatory, antimicrobial, enzymatic inhibitory and antioxidant agents. Within the field of neurodegenerative diseases are described different types and intervention processes, which include the development of acetylcholinesterase (AChE) inhibitors, which combined with another drugs are used on therapy for Alzheimer's diseases. These inhibitors allow acetylcholine levels in the brain to stabilize or even enhance them, since it's established that this enzyme is responsible for the metabolism of this important neurotransmitter. In our group, we have already synthesised multiple novel compounds incorporating the coumarin moiety with remarkable activity towards MAO and/or AChE. In this work, we continue to exploit this scaffold by the synthesis of novel 3-amidocoumarins for the treatment of neurodegenerative diseases. Following this work, pharmacological studies of the prepared compounds as AChE inhibitors are currently in progress. Some preliminary results are presented in this communication.
- Published
- 2013
41. NITROGEN HETEROCYCLES AS POTENTIAL ANTIBACTERIAL AGENTS
- Author
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Margarita Gutiérrez, Yorley Duarte, Bárbara Arévalo, Gabriel Vallejos, Tomas Poblete, Luis Astudillo, Jessica Amigo, Gonzalo Martínez, and Francisca Matus
- Subjects
biology ,medicine.drug_class ,Antibiotics ,Biological activity ,biology.organism_classification ,Antimicrobial ,Combinatorial chemistry ,Acinetobacter baumannii ,chemistry.chemical_compound ,Antibiotic resistance ,chemistry ,medicine ,Povarov reaction ,Isoxazole ,Antibacterial activity - Abstract
Nitrogen heterocycles are a part of a special group of organic substances due to its many applications in the pharmaceutical market, exist a large number of structures carrying nitrogenous substances. Among these heterocycles the isoxazoles and tetrahydroquinolines (THQs)1 have shown significant biological activity on different therapeutic targets. They show several applications in diverse areas such as pharmaceuticals, agrochemistry, and industry.2 They are also found in natural sources showing insecticidal, plant growth regulation, and pigment functions.3 Within the field of activity of the heterocycles is found the antibacterial activity, which has had a growing interest because the inappropriated use of antibiotic has increased the resistance of bacterial to the commercial antibiotics, even the appearance of bacterial strain with no treatment knows.4 Similarly, the emergence of antibiotic resistance in some bacterial populations is yet a relevant field of study in some areas of Science included the organic chemistry.Due to mentioned previously, the THQs e isoxazole compounds have been considered a good starting material for the search of novel antimicrobial agents, therefore we include them in this research.Isoxazoles derivatives were synthesized by 1,3 dipolar cycloaddition and a serie of tetrahydroquinolines derivatives were synthesized by Povarov reaction, these compounds were purified by conventional chromatographic techniques and characterized spectroscopically. Antibacterial activity was assessed by spectrophotometric measurements, determining the MIC for each compound against the four bacterial, Escherichia coli, Pseudomona aeruginosa, Staphylococcus aureus and Acinetobacter baumannii.
- Published
- 2013
42. Crystal structure of 1,3-bis(6-methoxyquinolin-2-yl)benzene, C26H20N2O2
- Author
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Alejandro Cárdenas, Yorley Duarte, Matías López-Rodríguez, Michael Bolte, Iván Brito, Luis Astudillo, and Margarita Gutiérrez
- Subjects
Inorganic Chemistry ,chemistry.chemical_compound ,Crystallography ,chemistry ,QD901-999 ,General Materials Science ,Crystal structure ,Condensed Matter Physics ,Benzene ,Medicinal chemistry - Abstract
C26H20N2O2, monoclinic, C2/c (no. 15), a = 36.237(2) Å, b = 6.6915(3) Å, c = 16.3951(8) Å, β = 107.453(4)°, V = 3792.5 Å3, Z = 8, Rgt(F) = 0.0686, wRref(F2) = 0.1991, T = 173 K.
- Published
- 2013
43. Experimental and Theoretical Approaches in the Study of Phenanthroline‐Tetrahydroquinolines for Alzheimer's Disease
- Author
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Dr. Yorley Duarte, Dr. Margarita Gutierrez, Dr. Rocío Álvarez, Dr. Jans H. Alzate‐Morales, and Dr. Jorge Soto‐Delgado
- Subjects
Alzheimer's disease imino-Diels-Alder ,acetylcholinesterase ,tetrahydroquinolines ,density functional theory ,Chemistry ,QD1-999 - Abstract
Abstract The imino‐Diels‐Alder reaction is one of the most common strategies in organic chemistry and is an important tool for providing a broad spectrum of biologically active heterocyclic systems. A combined theoretical and experimental study of the imino‐Diels‐Alder reaction is described. The new phenanthroline‐tetrahydroquinolines were evaluated as cholinesterase inhibitors. Their cytotoxicity in human neuroblastoma SH‐SY5Y cells was also evaluated. The theoretical results suggest that compounds formation in stages can be explained by endo cycloadducts under the established reaction conditions, thereby confirming experimental results obtained for percentage yield. These results allowed us to establish that pyridine substituent remarkably influences activation energy and reaction yield, as well as in acetylcholinesterase (AChE) activity. Among these derivatives, compounds with 4‐pyridyl and 4‐nitrophenyl showed favorable AChE activity and proved to be non‐cytotoxic.
- Published
- 2019
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