43 results on '"Yun-Jeong Choe"'
Search Results
2. Heterotypic cell-in-cell structures between cancer and NK cells are associated with enhanced anticancer drug resistance
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Yun-Jeong Choe, Jin Young Min, Hyunseong Lee, Sang-Yeop Lee, Joseph Kwon, Hye-Jin Kim, Jangho Lee, Hyun Min Kim, Hye Sun Park, Mi Young Cho, Ju-Yong Hyun, Hye Min Kim, Yong-Ho Chung, Sang Keun Ha, Hye Gwang Jeong, Inpyo Choi, Tae-Don Kim, Kwan Soo Hong, and Eun Hee Han
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Cell biology ,Biophysics ,Cancer ,Science - Abstract
Summary: The heterotypic CIC structures formed of cancer and immune cells have been observed in tumor tissues. We aimed to assess the feasibility of using heterotypic CICs as a functional biomarker to predict NK susceptibility and drug resistance. The heterotypic CIC-forming cancer cells showed a lower response to NK cytotoxicity and higher proliferative ability than non-CIC cancer cells. After treatment with anticancer drugs, cancer cells that formed heterotypic CICs showed a higher resistance to anticancer drugs than non-CIC cancer cells. We also observed the formation of more CIC structures in cancer cells treated with anticancer drugs than in the non-treated group. Our results confirm the association between heterotypic CIC structures and anticancer drug resistance in CICs formed from NK and cancer cells. These results suggest a mechanism underlying immune evasion in heterotypic CIC cancer cells and provide insights into the anticancer drug resistance of cancer cells.
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- 2022
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3. TDP-43 and PINK1 mediate CHCHD10 S59L mutation–induced defects in Drosophila and in vitro
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Minwoo Baek, Yun-Jeong Choe, Sylvie Bannwarth, JiHye Kim, Swati Maitra, Gerald W. Dorn, J. Paul Taylor, Veronique Paquis-Flucklinger, and Nam Chul Kim
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Science - Abstract
Mutations in CHCHD10 can cause amyotrophic lateral sclerosis and frontotemporal dementia. The authors generate mutant Drosophila and HeLa cells to study the underlying mechanisms of CHCHD10S59L -induced degeneration and show it is mediated by TDP-43 and PINK1 pathways.
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- 2021
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4. Author Correction: TDP-43 and PINK1 mediate CHCHD10 S59L mutation–induced defects in Drosophila and in vitro
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Minwoo Baek, Yun-Jeong Choe, Sylvie Bannwarth, JiHye Kim, Swati Maitra, Gerald W. Dorn, J. Paul Taylor, Veronique Paquis-Flucklinger, and Nam Chul Kim
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Science - Published
- 2021
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5. A metal–organic framework modulated to site-isolate Cl˙ pendants via radical inter-conversion for degrading hard-to-ionize aqueous organic wastes
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Minsung Kim, Md Al Mamunur Rashid, Yun Jeong Choe, Sang Hoon Kim, Jung-Hyun Lee, Keunhong Jeong, and Jongsik Kim
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Renewable Energy, Sustainability and the Environment ,General Materials Science ,General Chemistry - Abstract
UiO-66 is modulated to bear Zr4+/–OH to form ˙OH via H2O2 homolysis and Cl− pendants to form Cl˙ analogues (Cl˙SUP) via ˙OH-mediated radicalization. Cl˙SUP enhances the activity/selectivity/reusability over ˙OH/SO4˙−SUP/NO3˙SUP in degrading aromatics.
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- 2023
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6. An implication of moral meta-cognition in moral education
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Yun Jeong Choe and Beong Wan Chu
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- 2022
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7. The Mediating Effects of Supervisory Relationship between Supervisee Insecure Attachment Strategies and Supervisee Self-Disclosure in Play Therapy Supervision
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Yun-Jeong Choe and Mi-Kyoung Jin
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- 2022
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8. Deciphering Evolution Pathway of Supported NO3• Enabled via Radical Transfer from •OH to Surface NO3– Functionality for Oxidative Degradation of Aqueous Contaminants
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Sang Hoon Kim, Jongsik Kim, Yun Jeong Choe, Keunhong Jeong, and In-Suk Choi
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Exothermic reaction ,Aqueous solution ,Chemistry ,OH ,oxidative degradation ,Photochemistry ,Endothermic process ,Article ,XANES ,NO3• ,law.invention ,radical transfer ,chemistry.chemical_compound ,pollutants ,law ,Desorption ,Oxidizing agent ,Phenol ,manganese oxide ,Electron paramagnetic resonance ,QD1-999 - Abstract
NO3• can compete with omnipotent •OH/SO4•– in decomposing aqueous pollutants because of its lengthy lifespan and significant tolerance to background scavengers present in H2O matrices, albeit with moderate oxidizing power. The generation of NO3•, however, is of grand demand due to the need of NO2•/O3, radioactive element, or NaNO3/HNO3 in the presence of highly energized electron/light. This study has pioneered a singular pathway used to radicalize surface NO3– functionalities anchored on polymorphic α-/γ-MnO2 surfaces (α-/γ-MnO2-N), in which Lewis acidic Mn2+/3+ and NO3– served to form •OH via H2O2 dissection and NO3• via radical transfer from •OH to NO3– (•OH → NO3•), respectively. The elementary steps proposed for the •OH → NO3• route could be energetically favorable and marginal except for two stages such as endothermic •OH desorption and exothermic •OH-mediated NO3– radicalization, as verified by EPR spectroscopy experiments and DFT calculations. The Lewis acidic strength of the Mn2+/3+ species innate to α-MnO2-N was the smallest among those inherent to α-/β-/γ-MnO2 and α-/γ-MnO2-N. Hence, α-MnO2-N prompted the rate-determining stage of the •OH → NO3• route (•OH desorption) in the most efficient manner, as also evidenced by the analysis on the energy barrier required to proceed with the •OH → NO3• route. Meanwhile, XANES and in situ DRIFT spectroscopy experiments corroborated that α-MnO2-N provided a larger concentration of surface NO3– species with bi-dentate binding arrays than γ-MnO2-N. Hence, α-MnO2-N could outperform γ-MnO2-N in improving the collision frequency between •OH and NO3– species and in facilitating the exothermic transition of NO3– functionalities to surface NO3• analogues per unit time. These were corroborated by a greater efficiency of α-MnO2-N in decomposing phenol, in addition to scavenging/filtration control runs and DFT calculations. Importantly, supported NO3• species provided 5–7-fold greater efficiency in degrading textile wastewater than conventional •OH and supported SO4•- analogues we discovered previously.
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- 2021
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9. An electro-Fenton system with magnetite coated stainless steel mesh as cathode
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Ji Young Byun, Sang Hoon Kim, Yun Jeong Choe, and Jongsik Kim
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Materials science ,FEAL ,02 engineering and technology ,General Chemistry ,engineering.material ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Catalysis ,Cathode ,0104 chemical sciences ,law.invention ,Ferrous ,chemistry.chemical_compound ,chemistry ,Coating ,Chemical engineering ,law ,engineering ,Degradation (geology) ,Calcination ,0210 nano-technology ,Magnetite - Abstract
An electro-Fenton system with magnetite coated stainless steel (SUS) mesh as cathode was developed and tested for removing methylene blue in wastewater. For better adhesion between magnetite particles and SUS mesh surface, surface roughening of SUS mesh with FeAl particles was carried out. 850 °C was chosen as the optimized calcination temperature for FeAl treatment. When SUS meshes were coated with magnetite particles and applied as the cathode in an electro-Fenton system, catalytic activation of in situ produced H2O2 was enhanced. And this activation occurred heterogeneously on the surface of magnetite particles on cathode rather than homogeneously with free roaming leached ferrous ions. By coating magnetite particles on SUS meshes, degradation efficiency of methylene blue in neutral conditions was better than that in acidic conditions with bare SUS meshes as cathode in our electro-Fenton system.
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- 2021
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10. Deploying radical inter-transition from OH to supported NO3 on Mono-dentate NO3--modified ZrO2 to sustain fragmentation of aqueous contaminants
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Yun Jeong Choe, Seokhyun Lee, Minsung Kim, Sang Hoon Kim, In-Suk Choi, Keunhong Jeong, and Jongsik Kim
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Filtration and Separation ,Analytical Chemistry - Published
- 2023
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11. In vitro validation of neoantigen prediction algorithm for developing personalized cancer vaccine therapy
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Yun-jeong Choe, Eunyoung Kim, Jooyeon Oh, Miran Jang, Weixan Fu, Hanna Lee, Minho Chung, Kyung-Ho Pyo, Chung-Bong Synn, Sora Kim, Yohan Yang, Ahyeon Kim, Byung Chul Cho, Han Sang Kim, Sangwoo Kim, Beatriz Carreno, Jee Ye Kim, and Soonmyung Paik
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BackgroundThe development of personalized neoantigen-based therapeutic cancer vaccines relies on computational algorithm-based pipelines. One of the critical issues in the pipeline is obtaining higher positive predictive value (PPV) performance, i.e., how many are immunogenic when selecting the top 5 to 20 candidate neoepitopes for the vaccination. We attempted to test the PPV of a neoepitope prediction algorithm Neopepsee.MethodsSix breast cancer patients and patient-derived xenografts from three lung cancer patients and their paired peripheral blood samples were subjected to whole-exome and RNA sequencing. Neoantigen was predicted using two different algorithms (Neopepsee and pVACseq). Response of induced memory T cells to neopeptide candidates was evaluated by IFN-γ Enzyme-linked immune absorbent spot (ELISpot) assays of peripheral blood mononuclear cell (PBMC) from three HLA-matched donors. Positive ELISpot response to a candidate peptide in at least 2 of 3 donor PBMC was regarded as an immunogenic response.ResultsNeopepsee predicted 159 HLA-A matched neoepitope candidates out of 898 somatic mutations in nine patients (six breast and three lung cancer patients), whereas pVACseq predicted 84 HLA-A matched candidates. A total of 26 neopeptide candidates overlapped between the two predicted candidate pools. Among the candidates, 28 (20%, 28/ 137) and 15 (20%, 15/ 75) were positive by ELISpot assay, respectively. Among 26 overlapped candidates, 20 could be tested, and 7 of them (35%) were validated by ELISpot. Neopepsee identified at least one neoepitope in 7 of 9 patients (range 0-6), compared to 6 by pVACseq (range 0-5).ConclusionAs suggested by Tumor Neoantigen Selection Alliance (TESLA), our results demonstrate low PPV of individual prediction models as well as the complementary nature of the Neopepsee and pVACseq and may help design neoepitope targeted cancer vaccines. Our data contribute a significant addition to the database of tested neoepitope candidates that can be utilized to further train and improve the prediction algorithms.
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- 2021
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12. Steering •OH-triggered radicalization of surface phosphate functionality and its protonated analogues to accelerate mineralization of aqueous organic wastes
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Yun Jeong Choe, Sang Hoon Kim, Keunhong Jeong, and Jongsik Kim
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General Chemical Engineering ,Environmental Chemistry ,General Chemistry ,Industrial and Manufacturing Engineering - Published
- 2023
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13. In vitro validation of the immunogenicity of the predicted neoepitopes from high-risk estrogen receptor-positive breast cancer
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Yun-jeong Choe, Eunyoung Kim, Jooyeon Oh, Miran Jang, Weixan Fu, Hann Lee, Minho Chung, Kyung-Ho Pyo, Chung-Bong Synn, Sora Kim, Yohan Yang, Ahyeon Kim, Byung Chul Cho, Han Sang Kim, Sangwoo Kim, Beatriz Carreno, Jee Ye Kim, and Soonmyung Paik
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Whether estrogen receptor-positive (ER+) breast cancer (BC) can be a target for therapeutic neoepitope vaccination is not clear due to its low mutation burden. We tested the immunogenicity of predicted neoepitopes from exome and RNA-seq data from three ER+/luminal B subtype BC samples using IFN-γ ELISpot assays of HLA-matched donor PBMCs. As a control, three ER- BC and three lung cancers were tested. The ensemble of Neopepsee and pVACseq pipelines predicted 93 neoepitopes from 299 SNVs in three ER+ BCs. Among them, 90 could be tested with ELISpot, and 14 (15.6%) were immunogenic (1, 5, and 10 for each tumor). In three ER- BC samples, 52 neoepitopes were predicted from 271 SNVs, and 12 (25.0%) of 48 tested were immunogenic (2, 4, and 8 for each tumor). Of the three lung cancers, 53 of 72 predicted neoepitope candidates were tested, and 10 of them were immunogenic (18.9%) (0, 1, and 11 for each tumor). These differences were not statistically significant. We conclude that luminal B subtype BCs express neoepitopes and can be a candidate for therapeutic neoepitope vaccination.
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- 2021
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14. Grasping periodic trend and rate-determining step for S-modified metals of metal sulfides deployable to produce OH via H2O2 cleavage
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Yun Jeong Choe, Jongsik Kim, Satadeep Bhattacharjee, Seung-Cheol Lee, and Sang Hoon Kim
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Aqueous solution ,Chemistry ,Process Chemistry and Technology ,Kinetics ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Rate-determining step ,01 natural sciences ,Medicinal chemistry ,Catalysis ,0104 chemical sciences ,Metal ,chemistry.chemical_compound ,visual_art ,Desorption ,visual_art.visual_art_medium ,Phenol ,0210 nano-technology ,Bond cleavage ,General Environmental Science - Abstract
Iron sulfides are fascinating catalytic phases because these include S-modified Feδ+ (δ ≤ 2) species functioning as H2O2 activators to form OH used for oxidatively degrading aqueous contaminants (e.g., phenol). As an initial step for locating S-modified metal species (Mδ+) that outperform Feδ+ in catalytic H2O2 cleavage, hexagonal metal sulfides (MS) were synthesized using Mn, Fe, Co, Ni, and Cu to understand electric potential-assisted H2O2 scission kinetics on Mδ+ species. Niδ+ species were found to show the greatest OH productivity among all Mδ+ species studied, mainly resulting from the Lewis acidic nature of Niδ+ species adequate to expedite the liberation of OH species. This was partially evidenced by H2O2 activation/phenol degradation runs on Mδ+ species, wherein initial H2O2 activation rate (-rH2O2,0) or initial phenol degradation rate (-rPHENOL,0) of Niδ+ species was 3–9 times those of the other Mδ+ species. Niδ+ species, therefore, were located in the middle of the volcano-shaped curve plotting -rH2O2,0 (or -rPHENOL,0) versus the type of Mδ+. Kinetic assessment of Mδ+ species under fine-tuned reaction environments also showed that regardless of varying H2O2 concentrations, Mδ+ species were found to retain their -rH2O2,0 values in the absence of electric potentials. Conversely, Mδ+ species could enhance -rPHENOL,0 values at larger electric potentials, where greater energies were likely exerted on Mδ+ species. This indeed corroborated that OH desorption from Mδ+ species was the rate-determining step to direct catalytic H2O2 scission. In addition to heterogeneous catalytic nature of Niδ+ species in fragmenting H2O2, outstanding H2O2 scission ability provided by Niδ+ species could also compensate for their moderate catalytic stability at pH-neutral condition.
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- 2019
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15. TDP-43 and PINK1 mediate CHCHD10S59L mutation–induced defects in Drosophila and in vitro
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J. Paul Taylor, Sylvie Bannwarth, Véronique Paquis-Flucklinger, Minwoo Baek, Swati Maitra, Ji Hye Kim, Nam Chul Kim, Yun Jeong Choe, and Gerald W. Dorn
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0301 basic medicine ,General Physics and Astronomy ,medicine.disease_cause ,Animals, Genetically Modified ,HeLa ,0302 clinical medicine ,Drosophila Proteins ,Peptide sequence ,Mutation ,Microscopy, Confocal ,Multidisciplinary ,biology ,Chemistry ,Phenotype ,Cell biology ,Mitochondria ,DNA-Binding Proteins ,Protein Transport ,Mechanisms of disease ,Frontotemporal Dementia ,Drosophila melanogaster ,Science ,PINK1 ,Protein Serine-Threonine Kinases ,Molecular neuroscience ,General Biochemistry, Genetics and Molecular Biology ,Article ,Mitochondrial Proteins ,03 medical and health sciences ,Cell Line, Tumor ,mental disorders ,medicine ,Animals ,Humans ,Amino Acid Sequence ,Author Correction ,Sequence Homology, Amino Acid ,Amyotrophic Lateral Sclerosis ,fungi ,HEK 293 cells ,nutritional and metabolic diseases ,General Chemistry ,biology.organism_classification ,nervous system diseases ,HEK293 Cells ,030104 developmental biology ,Cell culture ,030217 neurology & neurosurgery ,HeLa Cells - Abstract
Mutations in coiled-coil-helix-coiled-coil-helix domain containing 10 (CHCHD10) can cause amyotrophic lateral sclerosis and frontotemporal dementia (ALS-FTD). However, the underlying mechanisms are unclear. Here, we generate CHCH10S59L-mutant Drosophila melanogaster and HeLa cell lines to model CHCHD10-associated ALS-FTD. The CHCHD10S59L mutation results in cell toxicity in several tissues and mitochondrial defects. CHCHD10S59L independently affects the TDP-43 and PINK1 pathways. CHCHD10S59L expression increases TDP-43 insolubility and mitochondrial translocation. Blocking TDP-43 mitochondrial translocation with a peptide inhibitor reduced CHCHD10S59L-mediated toxicity. While genetic and pharmacological modulation of PINK1 expression and activity of its substrates rescues and mitigates the CHCHD10S59L-induced phenotypes and mitochondrial defects, respectively, in both Drosophila and HeLa cells. Our findings suggest that CHCHD10S59L-induced TDP-43 mitochondrial translocation and chronic activation of PINK1-mediated pathways result in dominant toxicity, providing a mechanistic insight into the CHCHD10 mutations associated with ALS-FTD., Mutations in CHCHD10 can cause amyotrophic lateral sclerosis and frontotemporal dementia. The authors generate mutant Drosophila and HeLa cells to study the underlying mechanisms of CHCHD10S59L -induced degeneration and show it is mediated by TDP-43 and PINK1 pathways.
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- 2021
16. Fe3S4/Fe7S8-promoted degradation of phenol via heterogeneous, catalytic H2O2 scission mediated by S-modified surface Fe2+ species
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Jongsik Kim, Yun Jeong Choe, Sang Hoon Kim, and Ji Young Byun
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inorganic chemicals ,chemistry.chemical_classification ,Sulfide ,Chemistry ,Process Chemistry and Technology ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Combinatorial chemistry ,Decomposition ,Catalysis ,0104 chemical sciences ,Reaction rate ,chemistry.chemical_compound ,Reaction dynamics ,Phenol ,Degradation (geology) ,0210 nano-technology ,Bond cleavage ,General Environmental Science - Abstract
Enhancing OH productivity via heterogeneous, catalytic H2O2 activation is a long-standing conundrum in H2O purification and thus requires the renovation of conventional reaction systems. The initial step in realizing advanced H2O2 decomposition via heterogeneous catalytic manner is the exploration of the solid capable of efficiently cleaving O O bond inherent to H2O2 and minimizing the loss of catalytic species during vigorous reaction dynamics. While using phenol as a model compound for recalcitrants, this paper highlights the use of Fe3S4/Fe7S8 as a catalyst to enhance OH productivity and thus promote phenol degradation via electro-Fenton reaction over conventional Fe2O3, Fe3O4, and other sulfide analogue (FeS2). Materials’ characterizations and kinetic interpretation of reaction runs under controlled environments served to substantiate the benefits which were provided by Fe3S4/Fe7S8 during the reaction. Fe3S4/Fe7S8 incorporated greater amount of S-modified, surface-exposed Fe2+ sites to cleave H2O2 than FeS2. This improved catalytic consequence of Fe3S4/Fe7S8 (i.e., phenol conversion and initial reaction rate), as also evidenced by control runs detailing H2O2 decomposition in conjunction with tert-butyl alcohol-driven OH scavenging. Filtration control runs as well as recycle runs were also used to verify that Fe3S4/Fe7S8 could heterogeneously catalyze H2O2 scission under the mild, adequate reaction environments, which were realized by the use of low electrical powers and the catalyst immobilized on a cathode.
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- 2018
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17. PGA2-induced expression of HO-1 is mediated by transcriptional upregulation of Nrf2
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Sun-Young Lee, Ho-Shik Kim, Sang-sun Lee, Hyein Lee, and Yun-Jeong Choe
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0301 basic medicine ,Gene knockdown ,Messenger RNA ,Small interfering RNA ,Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,respiratory system ,Cycloheximide ,Toxicology ,environment and public health ,Pathology and Forensic Medicine ,Cell biology ,Heme oxygenase ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,chemistry ,Transcription (biology) ,Protein biosynthesis ,General Pharmacology, Toxicology and Pharmaceutics ,Transcription factor - Abstract
Prostaglandin (PG) A2 reportedly stimulated expression of heme oxygenase(HO)-1 at the level of transcription via the activation of p38MAPK. Details of the mechanism, however, have not been provided, and this includes identification of the transcription factors responsible for PGA2-induced HO-1 expression. Herein is described an analysis of the role of nuclear factor erythroid 2 related factor 2 (Nrf2) and how PGA2 increases the activity of Nrf2 during PGA2-induced HO-1 expression. Expressions of HO-1 and Nrf2 were analyzed at the levels of both mRNA and protein. Nrf2 siRNA, SB203580, an inhibitor of p38MAPK, and scavengers of reactive oxygen species (ROS) were used to identify the effects of Nrf2, p38MAPK and ROS on PGA2-induced HO-1 expression. Although SB203580 suppressed PGA2-induced HO-1 expression, genetic activation of p38MAPK could not stimulate the transcription of HO-1. Cycloheximide (CHX), an inhibitor of protein translation, almost completely prevented PGA2-induced increase of HO-1 transcription, but it did not prevent the phosphorylation of p38MAPK, which suggests that both de novo protein synthesis and p38MAPK activity are required to induce the transcription of HO-1 in response to PGA2 treatment. In addition, PGA2 increased the level of both Nrf2 mRNA and protein in a dose-dependent manner. Knockdown of Nrf2 using small interfering RNA (siRNA) suppressed PGA2-induced HO-1 expression. The PGA2-induced transcription of Nrf2 was prevented by ROS scavengers such as n-acetyl-l-cysteine and tempol but not CHX. Furthermore, siRNA against p38MAPK did not change the level of nuclear Nrf2 protein. These findings suggest that PGA2 induces HO-1 transcription via an increase in Nrf2 protein, the transcription of which is initiated by an accumulation of ROS that is independent of the p38MAPK activation pathway.
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- 2018
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18. PGA2 induces the expression of HO-1 by activating p53 in HCT116 cells
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Yun-Jeong Choe, Hyein Lee, Sun-Young Lee, Sang-sun Lee, Ho-Shik Kim, and Ji-Young Park
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0301 basic medicine ,biology ,Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,E-box ,Toxicology ,Molecular biology ,Activating transcription factor 2 ,Pathology and Forensic Medicine ,Heme oxygenase ,03 medical and health sciences ,030104 developmental biology ,Transcription (biology) ,RNA interference ,biology.protein ,E2F1 ,General Pharmacology, Toxicology and Pharmaceutics ,Protein kinase A ,Transcription factor - Abstract
Prostaglandin (PG) A2 which is a cytotoxic PG, was reported to induce the expression of heme oxygenase (HO)-1 via activation of p38MAPK to keep U2OS cells from cell cycle arrest in G2M phase. The expression of HO-1 is primarily regulated at the level of transcription. But the transcription factors that are responsible for PGA2-induced HO-1 expression were not clarified yet. Here, we report that PGA2-induced transcription of HO-1 is mediated by p53, a tumor suppressive transcription factor. In HCT116 cells, PGA2 treatment led to the phosphorylation of p53 and an increase of p21WAF1 transcription as well as the activation of HO-1 transcription. Knocking p53 down via RNA interference or inhibiting the p53’s transcriptional activity by pifithrin-α treatment led to suppression of the increase in the level of both HO-1 expression and activity of HO-1 promoter. Pretreatment of NU-7441, a chemical inhibitor of DNA-activated protein kinase (DNA-PK), prevented both the PGA2-induced phosphorylation of p53 and an increase of HO-1 transcription. In addition, N-acetyl-l-cysteine, a scavenger of reactive oxygen species (ROS), also mimicked the effect of NU-7441 on the PGA2-induced activation of p53 and HO-1 transcription. Collectively, these results suggest that PGA2 induces the expression of HO-1 via activation of p53, which is mediated by the ROS-DNA-PK pathway.
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- 2017
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19. A small-molecule inhibitor targeting the AURKC–IκBα interaction decreases transformed growth of MDA-MB-231 breast cancer cells
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Shin-Ae Yoo, SJ Park, Zee-Won Lee, Nam Doo Kim, Hye Gwang Jeong, Hyung Gyun Kim, Sun Woo Jin, Hee Sub Yun, Yun-Jeong Choe, Young-Ho Chung, Hyun Kyoung Kim, Eun Hee Han, and Jin-Young Min
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0301 basic medicine ,Gerontology ,Aurora B kinase ,IκBα ,03 medical and health sciences ,0302 clinical medicine ,Aurora kinase ,Breast cancer ,breast cancer ,medicine ,Cyclin B1 ,Cyclin-dependent kinase 1 ,business.industry ,Kinase ,AURKC ,medicine.disease ,030104 developmental biology ,protein–protein interaction ,Oncology ,030220 oncology & carcinogenesis ,Cancer research ,Phosphorylation ,business ,small-molecule inhibitor ,Research Paper - Abstract
// Eun Hee Han 1, 2, 6, * , Jin-Young Min 1, 3, * , Shin-Ae Yoo 1 , Sung-Joon Park 1 , Yun-Jeong Choe 1, 2 , Hee Sub Yun 1 , Zee-Won Lee 1 , Sun Woo Jin 4 , Hyung Gyun Kim 4 , Hye Gwang Jeong 4 , Hyun Kyoung Kim 5 , Nam Doo Kim 5 and Young-Ho Chung 1, 3, 6 1 Drug & Disease Target Research Team, Division of Bioconvergence Analysis, Korea Basic Science Institute (KBSI), Cheongju 28119, South Korea 2 Immunotherapy Convergence Research Center, Korean Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, South Korea 3 Graduate School of Analytical Science and Technology (GRAST), Chungnam National University, Daejeon 34134, South Korea 4 Department of Toxicology, College of Pharmacy, Chungnam National University (CNU), Daejeon 34133, South Korea 5 New Drug Development Center, Daugu Gyeoungbuk Medical Innovation Foundation (DGMIF), Daegu 41061, South Korea 6 Department of Bioanalytical Science, Korea University of Science and Technology (UST), Daejeon 34113, South Korea * These authors have contributed equally to this work Correspondence to: Young-Ho Chung, email: chungyh@kbsi.re.kr Keywords: AURKC, protein–protein interaction, IκBα, small-molecule inhibitor, breast cancer Received: December 29, 2016 Accepted: June 05, 2017 Published: June 29, 2017 ABSTRACT The Aurora kinases, Aurora A (AURKA), Aurora B (AURKB), and Aurora C (AURKC), are serine/threonine kinases required for the control of mitosis (AURKA and AURKB) or meiosis (AURKC). Several Aurora kinase inhibitors are being investigated as novel anticancer therapeutics. Recent studies demonstrated that AURKC activation contributes to breast cancer cell transformation. Therefore, AURKC is both a promising marker and therapeutic target for breast cancer; however, its signaling network has not been fully characterized. Using translocation-based cellular assays, we identified IκBα as a binding partner of AURKC, and found that AURKC phosphorylates IκBα at Ser32, thereby activating it. In silico modeling and computational analyses revealed a small-molecule inhibitor (AKCI) that blocked the AURKC–IκBα interaction and exerted antitumor activity in MDA-MB-231 breast cancer cells. Specifically, AKCI induced G2/M cell-cycle arrest through modulation of the p53/p21/CDC2/cyclin B1 pathways. In addition, the drug significantly inhibited MDA-MB-231 cell migration and invasion, as well as decreasing colony formation and tumor growth. Via its interaction with IκBα, AURKC indirectly induced NF-κB activation; accordingly, AKCI decreased PMA-induced activation of NF-κB. Thus, the small-molecule inhibitor AKCI represents a first step towards developing targeted inhibitors of AURKC protein binding, which may lead to further advances in the treatment of breast cancer.
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- 2017
20. Dominant toxicity of ALS–FTD-associated CHCHD10S59L is mediated by TDP-43 and PINK1
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Minwoo Baek, Nam Chul Kim, Gerald W. Dorn, J. Paul Taylor, and Yun-Jeong Choe
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Gene knockdown ,Mitochondrial toxicity ,biology ,C9orf72 ,Toxicity ,medicine ,PINK1 ,Drosophila melanogaster ,Kinase activity ,medicine.disease ,biology.organism_classification ,Phenotype ,Cell biology - Abstract
Mutations in coiled-coil-helix-coiled-coil-helix domain containing 10 (CHCHD10) are a genetic cause of amyotrophic lateral sclerosis and/or frontotemporal dementia (ALS-FTD). To elucidate how mutations in CHCHD10 induce disease, we generated a Drosophila melanogaster model of CHCHD10-mediated ALS-FTD. Expression of CHCHD10S59L in Drosophila caused gain-of-function toxicity in eyes, motor neurons, and muscles, in addition to mitochondrial defects in flies and HeLa cells. TDP-43 and PINK1 formed two axes, driving the mutant-dependent phenotypes. CHCHD10S59L expression increased TDP-43 insolubility and mitochondrial translocation. Blocking mitochondrial translocation with a peptide inhibitor reduced CHCHD10S59L-mediated toxicity. PINK1 knockdown rescued CHCHD10S59L-mediated phenotypes in Drosophila and HeLa cells. The two PINK1 substrates mitofusin and mitofilin were genetic modifiers of this phenotype. Mitofusin agonists reversed the CHCHD10S59L-induced phenotypes in Drosophila and HeLa cells and increased ATP production in Drosophila expressing C9orf72 with expanded GGGGCC repeats. Two peptides inhibitors of PINK1 mitigated the mitochondrial defects introduced by CHCHD10S59L expression. These findings indicate that TDP-43 mitochondrial translocation and chronic activation of PINK1-mediated pathways by CHCHD10S59L generate dominant toxicity. Therefore, inhibiting PINK1 activity may provide a therapeutic strategy for CHCHD10-associated disease.One Sentence SummaryInhibition of TDP-43 mitochondrial translocation or PINK1 kinase activity mitigates CHCHD10S59L-mediated mitochondrial toxicity.
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- 2019
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21. Tailoring Lewis acidic metals and SO42− functionalities on bimetallic Mn-Fe oxo-spinels to exploit supported SO4− in aqueous pollutant fragmentation
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Yun Jeong Choe, Jongsik Kim, and Sang Hoon Kim
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Aqueous solution ,General Chemical Engineering ,Radical ,Inorganic chemistry ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Industrial and Manufacturing Engineering ,0104 chemical sciences ,Catalysis ,Metal ,chemistry.chemical_compound ,Aniline ,chemistry ,Desorption ,visual_art ,visual_art.visual_art_medium ,Environmental Chemistry ,Phenol ,0210 nano-technology ,Bimetallic strip - Abstract
Generation of SO4 − anchored on metal oxides via radical transfer from •OH to surface SO42− functionality (•OH → SO4 −) is singular, unraveled recently, and promising to decompose aqueous refractory contaminants. The core in furthering supported SO4 − production is to reduce the energy required to accelerate the rate-determining step of the •OH → SO4 − (•OH desorption), while increasing the collision frequency between the •OH precursors (H2O2) and H2O2 activators (Lewis acidic metals) or between SO42−-attacking radicals (•OH) and supported SO4 − precursors (SO42−). Herein, Mn-substituted Fe3O4 oxo-spinels (MnXFe3-XO4; MnX) served as reservoirs to accommodate the Lewis acidic Fe/Mn and SO42−, whose properties were tailored by altering the metal compositions (X). The production of supported SO4 − via the •OH → SO4 − was of high tangibility, as confirmed by their electron paramagnetic resonance spectra coupled with those simulated. A concave trend was observed in the plot of the Lewis acidic strength of Fe/Mn versus X of MnX with the minimum at X ~ 1.5. Hence, Mn1.5 could expedite •OH liberation from the surface most proficiently and therefore exhibited the greatest initial H2O2 scission rate, as corroborated by its lowest energy barrier needed for activating the •OH → SO4 −. Meanwhile, a volcano-shaped trend was found in the plot of SO42− concentration versus X of MnX (other than Mn3). This could tentatively increase the collision frequency between •OH and SO42− on the surface of Mn1.5, as partially substantiated by its second largest pre-factor among the catalysts. Therefore, Mn1.5 exhibited the highest phenol consumption rate (-rPHENOL, 0) among the catalysts, which was ~ 20-fold larger than those for SO42−-modified Fe2O3 and NiO, which we reported previously. Mn1.5 also outperformed other catalysts in recycling phenol degradation, fragmenting another pollutant (aniline), and mineralizing phenol/aniline.
- Published
- 2021
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22. Author Correction: TDP-43 and PINK1 mediate CHCHD10 S59L mutation–induced defects in Drosophila and in vitro
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J. Paul Taylor, Nam Chul Kim, Yun Jeong Choe, Swati Maitra, Sylvie Bannwarth, Véronique Paquis-Flucklinger, Minwssoo Baek, Gerald W. Dorn, and Ji Hye Kim
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Genetics ,Multidisciplinary ,Science ,General Physics and Astronomy ,PINK1 ,General Chemistry ,Molecular neuroscience ,Mitochondrion ,Biology ,biology.organism_classification ,General Biochemistry, Genetics and Molecular Biology ,In vitro ,Mutation (genetic algorithm) ,Drosophila (subgenus) - Published
- 2021
23. Open Ni site coupled with SO42- functionality to prompt the radical interconversion of OH ↔ SO4− exploited to decompose refractory pollutants
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Jongsik Kim, Hyoungchul Kim, Yun Jeong Choe, and Ji-Su Kim
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Aqueous solution ,Diffuse reflectance infrared fourier transform ,Chemistry ,General Chemical Engineering ,Non-blocking I/O ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Photochemistry ,01 natural sciences ,Decomposition ,Industrial and Manufacturing Engineering ,0104 chemical sciences ,Electron transfer ,Desorption ,Environmental Chemistry ,Density functional theory ,0210 nano-technology ,Bond cleavage - Abstract
Exposing SO42− functionalities on Fe2O3 to an electric environment can produce supported SO4 − species via radical interconversion of OH ↔ SO4 −, which can degrade aqueous contaminants (phenol). This methodology is unique, has substantial potential, yet, is underexplored regarding how to mechanistically account for or to further accelerate radical transfer of OH → SO4 −. Herein, NiO serves as a novel platform to accommodate SO42− functionalities, whereas the resulting SO42−-modified NiO (NiO (S)) was kinetically evaluated or subjected to density functional theory (DFT) calculations to clarify the benefits of surface Niδ+ (δ ≤ 2), SO42−, or OH → SO4 −. NiO (S) was verified to contain abundant surface-labile O, facilitate electron transfer, and thus could increase H2O2 productivity. The Lewis acidity of Niδ+ active to cleave H2O2 was also improved by SO42−, as evidenced by in situ diffuse reflectance Infrared Fourier transform spectra and Bader charge calculations. This helped enhance OH productivity of NiO (S) over NiO, whose energetics were computed and validated that OH production was directed by OH desorption from Niδ+. Furthermore, electron paramagnetic resonance spectroscopy and DFT calculations also substantiated NiO (S) was energetically favorable toward radical transfer from OH to SO4 −, in which Ni bound to SO42− was identified to spur the formation of supported SO4 − via electron exchange with SO42−/ OH. In conjunction with mechanistic elucidation using theoretical calculations, kinetic assessment of H2O2 scission and phenol decomposition runs under various electric potentials corroborated OH desorption was the rate-determining step of overall OH → SO4 − pathway. Importantly, NiO (S) synthesized at 400 °C could enhance the efficiency, reusability, and stability in decomposing phenol over NiO/Fe2O3 functionalized with SO42− at 300, 500, or 600 °C.
- Published
- 2020
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24. Correction: The RNA-binding protein HuD regulates autophagosome formation in pancreatic β cells by promoting autophagy-related gene 5 expression
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Chongtae Kim, Wook Kim, Heejin Lee, Eunbyul Ji, Yun-Jeong Choe, Jennifer L. Martindale, Wado Akamatsu, Hideyuki Okano, Ho-Shik Kim, Suk Woo Nam, Myriam Gorospe, and Eun Kyung Lee
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Cell Biology ,Molecular Biology ,Biochemistry - Published
- 2020
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25. PGA2-induced HO-1 attenuates G2M arrest by modulating GADD45α expression
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Sun-Young Lee, Hyein Lee, Yun-Jeong Choe, Ho-Shik Kim, Byung-Chul Kim, and Kyoung-Won Ko
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0301 basic medicine ,Cyclopentenone ,Gene knockdown ,Protein elevated ,Health, Toxicology and Mutagenesis ,Ros scavenger ,Public Health, Environmental and Occupational Health ,Prostaglandin ,Toxicology ,Molecular biology ,Pathology and Forensic Medicine ,Cell biology ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,0302 clinical medicine ,chemistry ,Transcription (biology) ,RNA interference ,030220 oncology & carcinogenesis ,General Pharmacology, Toxicology and Pharmaceutics ,Heme - Abstract
Prostaglandin (PG) A2, a cyclopentenone PG, arrested the growth of U2OS cells in the G2M phase. While inducing G2M arrest, PGA2 increased the expression of heme oxygenase-1 (HO-1) at the level of transcription along with the accumulation of ROS and the activation of MAPKs including JNK, p38MAPK, and ERK1/2. Among the MAPKs, the inhibition of p38MAPK by a specific chemical inhibitor SB203580, or by RNA interference, but not JNK or ERK1/2, attenuated the PGA2-induced transcription of HO-1. N-acetylcysteine (NAC), a ROS scavenger, prevented PGA2-induced G2M arrest, p38MAPK activation and transcriptional induction of HO-1. PGA2 also stimulated GADD45α expression at the level of transcription, and the knockdown of GADD45α repressed PGA2-induced G2M arrest. Finally, the knockdown of the HO-1 protein elevated PGA2-induced GADD45α expression as well as G2M arrest. Collectively, these results suggest that PGA2 causes an increase in ROS accumulation which initiates both HO-1 transcription via p38MAPK, and G2M arrest via GADD45α transcription, and HO-1 attenuates G2M arrest by modulating the expression of GADD45α.
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- 2015
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26. Erratum to: PGA2-induced expression of HO-1 is mediated by transcriptional upregulation of Nrf2
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Sun-Young Lee, Sang-sun Lee, Yun-Jeong Choe, Hyein Lee, and Ho-Shik Kim
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Downregulation and upregulation ,Chemistry ,Health, Toxicology and Mutagenesis ,Pharmacology toxicology ,Public Health, Environmental and Occupational Health ,General Pharmacology, Toxicology and Pharmaceutics ,Toxicology ,Pathology and Forensic Medicine ,Cell biology - Published
- 2019
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27. Nutlin-3 induces BCL2A1 expression by activating ELK1 through the mitochondrial p53-ROS-ERK1/2 pathway
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Hyun Chul Choi, Sug Hyung Lee, Sun-Young Lee, Yun-Jeong Choe, Seok Joon Shin, and Ho-Shik Kim
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Mitochondrial ROS ,Cancer Research ,MAP Kinase Signaling System ,Immunoblotting ,Apoptosis ,Mitochondrion ,Biology ,Real-Time Polymerase Chain Reaction ,Transfection ,Piperazines ,Minor Histocompatibility Antigens ,chemistry.chemical_compound ,ELK1 ,Annexin ,Cell Line, Tumor ,Humans ,RNA, Small Interfering ,ets-Domain Protein Elk-1 ,Osteosarcoma ,Gene knockdown ,Reverse Transcriptase Polymerase Chain Reaction ,Imidazoles ,Nutlin ,Flow Cytometry ,Molecular biology ,Mitochondria ,Cell biology ,Enzyme Activation ,Proto-Oncogene Proteins c-bcl-2 ,Oncology ,chemistry ,Phosphorylation ,Tumor Suppressor Protein p53 ,Reactive Oxygen Species ,Signal Transduction - Abstract
Nutlin-3 which occupies the p53 binding pocket in HDM2, has been reported to activate apoptosis through both the transcriptional activity-dependent and -independent programs of p53. Transcription-independent apoptosis by nutlin-3 is triggered by p53 which is translocated to mitochondria. However, we previously demonstrated that the nutlin-3-induced mitochondrial translocation of p53 stimulates ERK1/2 activation, an anti-apoptosis signal, via mitochondrial ROS generation. We report on how nutlin-3-stimulated ERK1/2 activity inhibits p53-induced apoptosis. Among the anti-apoptotic BCL2 family proteins, BCL2A1 expression was increased by nutlin-3 at both the mRNA and protein levels, and this increase was prevented by the inhibition of ERK1/2. TEMPO, a ROS scavenger, and PFT-μ , a blocker of the mitochondrial translocation of p53, also inhibited BCL2A1 expression as well as ERK1/2 phosphorylation. In addition, nutlin-3 stimulated phosphorylation of ELK1, which was prevented by all compounds that inhibited nutlin-3-induced ERK1/2 such as U0126, PFT-μ and TEMPO. Moreover, an increase in BCL2A1 expression was weakened by the knockdown of ELK1. Finally, nutlin-3-induced apoptosis was found to be potentiated by the knockdown of BCL2A1, as demonstrated by an increase of in hypo-diploidic cells and Annexin V-positive cells. Parallel to the increase in apoptotic cells, the knockdown of BCL2A1 augmented the cleavage of poly(ADP-ribose) polymerase-1. It is noteworthy that the augmented levels of apoptosis induced by the knockdown of BCL2A1 were comparable to those of apoptosis induced by U0126. Collectively, these results suggest that nutlin-3-activated ERK1/2 may stimulate the transcription of BCL2A1 via the activation of ELK1, and BCL2A1 expression may contribute to the inhibitory effect of ERK1/2 on nutlin-3-induced apoptosis, thereby constituting a negative feedback loop of p53-induced apoptosis.
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- 2014
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28. Exploring Catalytic Traits of so4 2--Functionalized Iron Oxides Exploited to Decompose Aqueous Recalcitrant Pollutants
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Jongsik Kim, Yun Jeong Choe, and Sang Hoon Kim
- Abstract
Iron oxides are considered as ubiquitous yet valuable carriers of surface Fe2+ activators to excite H2O2, which results in the production of •OH used to decompose refractory contaminants present in H2O. To exploit catalytic nature provided by surface Fe2+ species, Fe2+ species can experience their modification by S to form S-doped iron oxide, Fe3S4, and Fe7S8, etc.1,2 For instance, we have synthesized Fe2O3 and have functionalized its surface using S species.2 The resulting S-doped Fe2O3 has manifested itself as an intriguing catalytic solid for H2O2 activation. This was because of its several benefits including 1) the incorporation of large amount of surface Fe2+ species used to cleave H2O2 via heterogeneous catalysis, 2) meso-porosity allowing for improved accessibility of H2O2 into surface Fe2+ species, and 3) chemical rigidity leading to minimized loss of Fe2+ species during H2O2 scission reactions.2 Nonetheless, surface of S-doped Fe2O3 isn't disclosed in two particular aspects of 1) H2O2 scission mechanism on S-modified Fe2+ species and 2) their catalytic functions. To answer these questions, we strategized the functionalization of Fe2O3 (pristine) surface with SO4 2- species at 300-600 °C to generate S300-S600 and investigated their surface properties using chemi-sorption/spectroscopy techniques. We then performed reaction runs under regulated environments, while using phenol as a model compound of recalcitrant compounds. Apparently, phenol degradation was directed by the characters of SO4 2- functionalities dispersed on Fe2O3 surface, whose features were markedly varied upon the change in the temperatures utilized to modify Fe2O3 surface with SO4 2- functionalities. 500 °C was required to degrade phenol in the most efficient manner among all SO4 2- functionalization temperatures studied, as showcased below. (XPHENOL and kAPP denote conversion of phenol and reaction rate constant, respectively.) In this presentation, we will address the answers to pivotal questions detailed above. In addition, we will also highlight our efforts for clarifying catalytic roles of surface SO4 2- functionalities via a series of kinetic assessment. References [1] J. Kim and co-workers, Appl. Catal. B 233 (2018) 272. [2] S. H. Kim and co-workers, Appl. Catal. B 184 (2016) 132. Figure 1
- Published
- 2019
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29. Nutlin-3 induces HO-1 expression by activating JNK in a transcription-independent manner of p53
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Ho-Shik Kim, Yun-Jeong Choe, Seok Joon Shin, Sun-Young Lee, and Kyung Won Ko
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Cancer Research ,Programmed cell death ,Transcription, Genetic ,MAP Kinase Kinase 4 ,p38 mitogen-activated protein kinases ,Apoptosis ,Biology ,p38 Mitogen-Activated Protein Kinases ,Piperazines ,chemistry.chemical_compound ,Cell Line, Tumor ,Humans ,Phosphorylation ,RNA, Small Interfering ,Regulation of gene expression ,Gene knockdown ,Imidazoles ,Proto-Oncogene Proteins c-mdm2 ,Nutlin ,Transfection ,Molecular biology ,Cell biology ,Gene Expression Regulation, Neoplastic ,Proto-Oncogene Proteins c-bcl-2 ,Oncology ,chemistry ,Tumor Suppressor Protein p53 ,Reactive Oxygen Species ,Heme Oxygenase-1 - Abstract
A recent study reported that p53 can induce HO-1 by directly binding to the putative p53 responsive element in the HO-1 promoter. In this study, we report that nutlin-3, a small molecule antagonist of HDM2, induces the transcription of HO-1 in a transcription-independent manner of p53. Nutlin-3 induced HO-1 expression at the level of transcription in human cancer cells such as U2OS and RKO cells. This induction of HO-1 did not occur in SAOS cells in which p53 was mutated and was prevented by knocking down the p53 protein using p53 siRNA transfection, but not by PFT-α, an inhibitor of the transcriptional activity of p53. Accompanying HO-1 expression, nutlin-3 stimulated the accumulation of ROS and the phosphorylation of MAPKs such as JNK, p38 MAPK and ERK1/2. Nutlin-3-induced HO-1 expression was suppressed by TEMPO, a ROS scavenger, and chemical inhibitors of JNK and p38 MAPK but not ERK1/2. In addition, nutlin‑3-induced phosphorylation of JNK but not p38 MAPK was inhibited by TEMPO. Notably, the levels of nutlin-3-induced ROS were correlated with the mitochondrial translocation of p53 and this induction was prevented by PFT-μ, an inhibitor of the mitochondrial translocation of p53. Consistent with the effect of the ROS scavenger and MAPK inhibitors, PFT-μ reduced HO-1 expression and the phosphorylation of JNK induced by nutlin-3. In the experiments of analyzing cell death, the knockdown of HO-1 augmented nutlin-3-induced apoptosis. Collectively, these results suggest that nutlin-3 induces HO-1 expression via the activation of both JNK which is dependent on ROS generated by p53 translocated to the mitochondria and p38 MAPK which appears to be stimulated by a ROS-independent mechanism, and this HO-1 induction may inhibit nutlin-3-induced apoptosis, constituting a negative feedback loop of p53-induced apoptosis.
- Published
- 2013
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30. Synthesis and SAR Study of T-Type Calcium Channel Blockers. Part II
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Soo Yeon Jung, Jungahn Kim, Yun Jeong Choe, Dong Joon Choo, Jae Yeol Lee, Hyewhon Rhim, and Han Na Seo
- Subjects
Molecular Structure ,Voltage-dependent calcium channel ,Stereochemistry ,Chemistry ,Calcium channel ,T-type calcium channel ,Pharmaceutical Science ,Systematic variation ,Calcium Channel Blockers ,Cell Line ,Calcium Channels, T-Type ,Structure-Activity Relationship ,Drug Design ,Drug Discovery ,Quinazolines ,Humans ,Potency ,Structure–activity relationship ,Selectivity - Abstract
3,4-Dihydroquinazoline derivatives have been known to be the novel and potent T-type calcium channel blockers. From a systematic variation of 3,4-dihydroquinazoline derivative 5c (KYS05043), plausible SAR results were established. It was revealed that a 5-(dimethylamino)pentylamino group at R(1), a biphenyl group at R(2), and a benzyl amido group at R(3)in the 3,4-dihydroquinazoline backbone are closely related with the channel selectivity (T/N-type) as well as the potency based on the discovery of 6k (KYS05090).
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- 2008
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31. The RNA-binding protein HuD regulates autophagosome formation in pancreatic β cells by promoting autophagy-related gene 5 expression
- Author
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Chongtae Kim, Eunbyul Ji, Heejin Lee, Suk Woo Nam, Myriam Gorospe, Ho Shik Kim, Hideyuki Okano, Wado Akamatsu, Eun Kyung Lee, Yun Jeong Choe, Wook Kim, and Jennifer L. Martindale
- Subjects
Lipoylation ,education ,ATG5 ,RNA-binding protein ,ELAV-Like Protein 4 ,Biology ,Biochemistry ,Autophagy-Related Protein 5 ,Cell Line ,Mice ,Insulin-Secreting Cells ,Phagosomes ,Protein biosynthesis ,Gene silencing ,Animals ,Molecular Biology ,3' Untranslated Regions ,Regulation of gene expression ,Messenger RNA ,Three prime untranslated region ,Autophagy ,Cell Biology ,Molecular biology ,Actins ,Mice, Mutant Strains ,Cell biology ,ELAV Proteins ,Gene Expression Regulation ,Protein Biosynthesis ,RNA ,Additions and Corrections ,Microtubule-Associated Proteins - Abstract
Tight regulation of autophagy is critical for the fate of pancreatic β cells. The autophagy protein ATG5 is essential for the formation of autophagosomes by promoting the lipidation of microtubule-associated protein LC3 (light chain 3). However, little is known about the mechanisms that regulate ATG5 expression levels. In this study, we investigated the regulation of ATG5 expression by HuD. The association of HuD with ATG5 mRNA was analyzed by ribonucleoprotein complex immunoprecipitation and biotin pulldown assays. HuD expression levels in pancreatic β cells were knocked down via siRNA, elevated by overexpression of a HuD-expressing plasmid. The expression levels of HuD, ATG5, LC3, and β-actin were determined by Western blot and quantitative RT-PCR analysis. Autophagosome formation was assessed by fluorescence microscopy in GFP-LC3-expressing cells and in pancreatic tissues from WT and HuD-null mice. We identified ATG5 mRNA as a post-transcriptional target of the mammalian RNA-binding protein HuD in pancreatic β cells. HuD associated with the 3′-UTR of the ATG5 mRNA. Modulating HuD abundance did not alter ATG5 mRNA levels, but HuD silencing decreased ATG5 mRNA translation, and, conversely, HuD overexpression enhanced ATG5 mRNA translation. Through its effect on ATG5, HuD contributed to the lipidation of LC3 and the formation of LC3-positive autophagosomes. In keeping with this regulatory paradigm, HuD-null mice displayed lower ATG5 and LC3 levels in pancreatic β cells. Our results reveal HuD to be an inducer of ATG5 expression and hence a critical regulator of autophagosome formation in pancreatic β cells.
- Published
- 2013
32. Wilms' tumor gene 1 enhances nutlin-3-induced apoptosis
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Yeun-Jun Chung, Yun-Jeong Choe, Yoon-Hyoung Kim, Sang-sun Lee, Jik Young Park, Seok Joon Shin, Ho-Shik Kim, and Sun-Young Lee
- Subjects
Cancer Research ,Programmed cell death ,Cell cycle checkpoint ,Cell ,bcl-X Protein ,Down-Regulation ,Apoptosis ,Biology ,Piperazines ,Amino Acid Chloromethyl Ketones ,Cell Line, Tumor ,medicine ,Humans ,RNA, Messenger ,WT1 Proteins ,Cell Proliferation ,Cell growth ,Caspase 3 ,Imidazoles ,Cytochromes c ,Proto-Oncogene Proteins c-mdm2 ,General Medicine ,Cell Cycle Checkpoints ,Cell cycle ,Caspase Inhibitors ,Caspase 9 ,Mitochondria ,Up-Regulation ,Enzyme Activation ,medicine.anatomical_structure ,bcl-2 Homologous Antagonist-Killer Protein ,Oncology ,Cancer cell ,Cancer research ,Tumor Suppressor Protein p53 ,Bcl-2 Homologous Antagonist-Killer Protein - Abstract
Nutlin-3, a human double minute 2 (HDM2) antagonist, induces cell cycle arrest or apoptosis by upregulating p53 in cancer cells. WT1, the product of Wilms' tumor gene 1, has been shown to interact with p53, but the effect of WT1 on nutlin-3-induced apoptosis has yet to be examined. To address this issue, we analyzed the inhibitory effect of nutlin-3 on cell growth as a function of Wt1 expression status using a Wt1-inducible U2OS cell line. In the absence of Wt1 expression, nutlin-3 induced cell cycle arrest with marginal cytotoxicity. Furthermore, upon Wt1 expression, nutlin-3 exerted a marked degree of cell death, as evidenced by the accumulation of hypo-diploid cells and LDH release. During cell death induction, cytochrome c was released into the cytosol, and caspase-9 and -3 were activated, suggesting that an intrinsic apoptotic pathway may be involved in this cell death. Consistent with this, z-VAD-Fmk, a pan-caspase inhibitor and the overexpression of BCL-XL attenuated the cell death. Nutlin-3 caused an increase in the mRNA levels of both BCL-XL and BAK, as well as their corresponding protein levels in mitochondria. In the presence of Wt1, nutlin-3-induced BCL-XL expression was attenuated while the expression of nutlin-3-induced BAK was potentiated. Collectively, these results suggest that WT1 potentiates nutlin-3-induced apoptosis by downregulating the expression of BCL-XL while upregulating that of BAK, which leads to the activation of an intrinsic apoptotic pathway.
- Published
- 2013
33. Anthocyanins in the black soybean (Glycine max L.) protect U2OS cells from apoptosis by inducing autophagy via the activation of adenosyl monophosphate-dependent protein kinase
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Yun-Jeong Choe, Kyoung-Won Ko, Ho-Shik Kim, Tae Joung Ha, Sun-Young Lee, and Seok Joon Shin
- Subjects
MAPK/ERK pathway ,Cancer Research ,p38 mitogen-activated protein kinases ,Apoptosis ,Biology ,AMP-Activated Protein Kinases ,Anthocyanins ,Cell Line, Tumor ,Autophagy ,Humans ,Phosphorylation ,RNA, Small Interfering ,Protein kinase A ,Protein kinase B ,Osteosarcoma ,Kinase ,Forkhead Box Protein O3 ,AMPK ,Forkhead Transcription Factors ,General Medicine ,Cell biology ,Oncology ,Cancer research ,RNA Interference ,Soybeans ,Signal transduction ,Cyclin-Dependent Kinase Inhibitor p27 ,Signal Transduction - Abstract
Anthocyanins (ATCs) have been reported to induce apoptosis in various types of cancer cells, stimulating the development of ATCs as a cancer chemotherapeutic or chemopreventive agent. It was recently reported that ATCs can induce autophagy, however, the mechanism for this remains unclear. In the present report, we carried out mechanistic studies of the mechanism involved in ATC-induced autophagy using ATCs extracted from black soybeans (cv. Cheongja 3, Glycine max L.). ATCs clearly induced hallmarks of autophagy, including LC3 puncta formation and the conversion of LC3-I to LC3-II in U2OS human osteosarcoma cells. The induction of autophagy was accompanied by the phosphorylation of multiple protein kinases including extracellular signal-regulated kinase (ERK)1/2, p38 mitogen-activated protein kinase (MAPK), c-Jun N-terminal kinase (JNK), protein kinase B (AKT) and adenosyl mono-phosphate-dependent protein kinase (AMPK). While chemical inhibitors against ERK1/2, p38 MAPK, JNK and AKT failed to inhibit ATC-induced autophagy, the suppression of AMPK by compound C (CC) as well as siRNA against AMPK reduced ATC-induced autophagy. The treatment of ATCs resulted in a decrease in intracellular ATP contents and the activation of AMPK by AICAR treatment also induced autophagy. It is noteworthy that the reduction of autophagy via the inhibition of AMPK resulted in enhanced apoptosis in ATC-treated cells. In addition, siRNA against forkhead box O3A (FOXO3a), a downstream target of AMPK, suppressed ATC-induced autophagy and p27KIP1 siRNA increased apoptosis in ATC-treated cells. Collectively, it can be concluded that ATCs induce autophagy in U2OS cells via activation of the AMPK-FOXO3a pathway and protect cells from ATC-induced apoptosis via the AMPK-p27KIP1 pathway. These results also suggest that autophagy-modulating agents could contribute to the efficient development of ATCs as anticancer therapy.
- Published
- 2012
34. WT1 Interacts with p53 and Inhibits p53‐induced p21 gene expression
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Kyoung-Won Ko, Sun-Young Lee, Ho-Shik Kim, and Yun-Jeong Choe
- Subjects
Chemistry ,Gene expression ,Genetics ,Molecular Biology ,Biochemistry ,Biotechnology ,Cell biology - Published
- 2012
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35. Anthocyanins of Black Soybean (cv. Cheongja 3) Induce Autophagy via AMPK Activation in U2OS cells
- Author
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Tae Joung Ha, Ho-Shik Kim, Sun-Young Lee, Kyoung-Won Ko, and Yun-Jeong Choe
- Subjects
Chemistry ,Autophagy ,Genetics ,AMPK ,Molecular Biology ,Biochemistry ,Biotechnology ,Cell biology - Published
- 2012
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36. Nutlin‐3 activates MEK1/2‐ERK1/2 pathway via p53‐induced ROS accumulation
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Sun-Young Lee, Kyoung-Won Ko, Ho-Shik Kim, and Yun-Jeong Choe
- Subjects
ERK1-2 Pathway ,chemistry.chemical_compound ,chemistry ,Genetics ,Nutlin ,Molecular Biology ,Biochemistry ,Biotechnology ,Cell biology - Published
- 2012
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37. ChemInform Abstract: Synthesis and SAR Study of T-Type Calcium Channel Blockers. Part 2
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Yun Jeong Choe, Jungahn Kim, Dong Joon Choo, Jae Yeol Lee, Hyewhon Rhim, Han Na Seo, and Soo Yeon Jung
- Subjects
Chemistry ,T-type calcium channel ,Biophysics ,Structure–activity relationship ,General Medicine - Published
- 2009
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38. T-type Ca2+ channel blockers suppress the growth of human cancer cells
- Author
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Chun Rim Oh, Su-Jin Kim, Dong Joon Choo, Jae Yeol Lee, Hyewhon Rhim, Yun Jeong Choe, Jungahn Kim, Young Deuk Kim, Jae Ho Heo, and Han Na Seo
- Subjects
medicine.medical_specialty ,Chemistry, Pharmaceutical ,Clinical Biochemistry ,Pharmaceutical Science ,Antineoplastic Agents ,Biochemistry ,chemistry.chemical_compound ,Calcium Channels, T-Type ,Inhibitory Concentration 50 ,Mice ,Internal medicine ,Cell Line, Tumor ,Drug Discovery ,medicine ,Animals ,Humans ,Channel blocker ,Doxorubicin ,Molecular Biology ,Cell Proliferation ,Voltage-dependent calcium channel ,Cell growth ,Calcium channel ,Organic Chemistry ,T-type calcium channel ,Calcium Channel Blockers ,Endocrinology ,chemistry ,Models, Chemical ,Cell culture ,Drug Design ,Cancer research ,Quinazolines ,Molecular Medicine ,Growth inhibition ,Drug Screening Assays, Antitumor ,medicine.drug - Abstract
In order to further clarify the role of T-type Ca(2+) channels in cell proliferation, we have measured the growth inhibition of human cancer cells by using our potent T-type Ca(2+) channel blockers. As a result, KYS05090, a most potent T-type Ca(2+) channel blocker, was found to be as potent as doxorubicin against some human cancer cells without acute toxicity. Therefore, this letter provides the biological results that T-type calcium channel is important in regulating the important cellular phenotype transition leading to cell proliferation, and thus novel T-type Ca(2+) channel blocker presents new prospects for cancer treatment.
- Published
- 2008
39. ChemInform Abstract: Discovery of Potent T-Type Calcium Channel Blocker
- Author
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Dong Jun Joo, Jungahn Kim, Jae Yeol Lee, Han Na Seo, Yoonjee Kim, So Ha Lee, Hyewhon Rhim, Ja Youn Choi, and Yun Jeong Choe
- Subjects
chemistry.chemical_compound ,Chemistry ,Blocking (radio) ,Stereochemistry ,Calcium channel ,T-type calcium channel ,Kurtoxin ,Molecule ,Potency ,General Medicine ,Combinatorial chemistry - Abstract
The intensive SAR study of 3,4-dihydroquinazoline series led to the most potent compound 10 (KYS05090: IC(50)=41+/-1 nM) against T-type calcium channel and its potency is nearly comparable to that of Kurtoxin. As a small organic molecule, this compound showed the highest blocking activity reported to date.
- Published
- 2008
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40. Discovery of potent T-type calcium channel blocker
- Author
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Yun Jeong Choe, Han Na Seo, Jungahn Kim, So Ha Lee, Jae Yeol Lee, Yoonjee Kim, Dong Jun Joo, Ja Youn Choi, and Hyewhon Rhim
- Subjects
Tertiary amine ,medicine.drug_class ,Stereochemistry ,Clinical Biochemistry ,Pharmaceutical Science ,Carboxamide ,Biochemistry ,Cell Line ,chemistry.chemical_compound ,Calcium Channels, T-Type ,Structure-Activity Relationship ,Drug Discovery ,medicine ,Structure–activity relationship ,Potency ,Humans ,Molecular Biology ,Bicyclic molecule ,Calcium channel ,Organic Chemistry ,T-type calcium channel ,Calcium Channel Blockers ,chemistry ,Kurtoxin ,Quinazolines ,Molecular Medicine - Abstract
The intensive SAR study of 3,4-dihydroquinazoline series led to the most potent compound 10 (KYS05090: IC(50)=41+/-1 nM) against T-type calcium channel and its potency is nearly comparable to that of Kurtoxin. As a small organic molecule, this compound showed the highest blocking activity reported to date.
- Published
- 2007
41. Induction of the Intrinsic Apoptotic Pathway by 3-Deazaadenosine Is Mediated by BAX Activation in HL-60 Cells
- Author
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Sun-Young Lee, Yoon-Hyoung Kim, Ho-Shik Kim, Won-Kyung Kang, In-Kyung Kim, Kim Jin, Yun-Jeong Choe, and Kyoung-Won Ko
- Subjects
Pharmacology ,Membrane potential ,Programmed cell death ,Physiology ,Cytochrome c ,Intrinsic apoptosis ,Mitochondrion ,Biology ,environment and public health ,Molecular biology ,Cell biology ,enzymes and coenzymes (carbohydrates) ,Cytosol ,Apoptosis ,Hydrolase ,biology.protein ,Original Article - Abstract
【3-Deazaadenosine (DZA), a potent inhibitor of S-adenosylhomocysteine hydrolase, was previously proposed to induce intrinsic apoptosis in human leukemic cells. In the present study, we analyzed the mechanism underlying the DZA-induced intrinsic apoptotic pathway. DZA activated typical caspase-dependent apoptosis in HL-60 cells, as demonstrated by an accumulation of hypo-diploidic cells, the processing of multiple procaspases and an inhibitory effect of z-VAD-Fmk on this cell death. During DZA-induced apoptosis, cytochrome c (cyt c) was released into the cytosol. This was neither prevented by z-VAD-Fmk and nor was it associated with the dissipation of mitochondrial membrane potential ( ${\Delta}{\Psi}_m$ ). Prior to the release of cyt c, BAX was translocated from the cytosol to mitochondria and underwent oligomerization. Finally, the overexpression of BCL-XL protected HL-60 cells from apoptosis by blocking both the cyt c release and BAX oligomerization. Collectively, these findings suggest that DZA may activate intrinsic apoptosis by stimulating BAX activation and thereby the release of cyt c.】
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- 2010
- Full Text
- View/download PDF
42. Nutlin-3 induces BCL2A1 expression by activating ELK1 through the mitochondrial p53-ROS-ERK1/2 pathway.
- Author
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SUN-YOUNG LEE, HYUN CHUL CHOI, YUN-JEONG CHOE, SEOK JOON SHIN, SUG HYUNG LEE, and HO-SHIK KIM
- Published
- 2014
- Full Text
- View/download PDF
43. The RNA-binding Protein HuD Regulates Autophagosome Formation in Pancreatic β Cells by Promoting Autophagy-related Gene 5 Expression.
- Author
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Chongtae Kim, Wook Kim, Heejin Lee, Eunbyul Ji, Yun-Jeong Choe, Jennifer L. Martindale, Wado Akamatsu, Hideyuki Okano, Ho-Shik Kim, Suk Woo Nam, Myriam Gorospe, and Eun Kyung Lee
- Subjects
- *
MESSENGER RNA , *AUTOPHAGY , *CARRIER proteins , *GENE expression , *VITAMIN B complex - Abstract
Tight regulation of autophagy is critical for the fate of pancreatic β cells. The autophagy protein ATG5 is essential for the formation of autophagosomes by promoting the lipidation of microtubuleassociated protein LC3 (light chain 3). However, little is known about the mechanisms that regulate ATG5 expression levels. In this study, we investigated the regulation of ATG5 expression by HuD. The association of HuD with ATG5 mRNA was analyzed by ribonucleoprotein complex immunoprecipitation and biotin pulldown assays. HuD expression levels in pancreatic β cells were knocked down via siRNA, elevated by overexpression of a HuDexpressing plasmid.Theexpression levels ofHuD,ATG5,LC3, and β-actin were determined by Western blot and quantitative RT-PCR analysis. Autophagosome formation was assessed by fluorescence microscopy in GFP-LC3-expressing cells and in pancreatic tissues fromWTand HuD-null mice. We identified ATG5 mRNA as a post-transcriptional target of the mammalian RNA binding protein HuD in pancreatic β cells. HuD associated with the 3'-UTR of the ATG5mRNA.Modulating HuD abundance did not alter ATG5 mRNA levels, but HuD silencing decreased ATG5 mRNA translation, and, conversely, HuD overexpression enhanced ATG5 mRNA translation. Through its effect on ATG5, HuD contributed to the lipidation of LC3 and the formation of LC3-positive autophagosomes. In keeping with this regulatory paradigm, HuD-null mice displayed lower ATG5 and LC3 levels in pancreaticβcells.Ourresults revealHuDtobeaninducer of ATG5 expression and hence a critical regulator of autophagosome formation in pancreaticβ cells. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
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