15 results on '"Zheng, Rena"'
Search Results
2. Natural history of clonal haematopoiesis seen in real‐world haematology settings.
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Patel, Shyam A., Gerber, William K., Zheng, Rena, Khanna, Shrinkhala, Hutchinson, Lloyd, Abel, Gregory A., Cerny, Jan, DaSilva, Brandon A., Zhang, Tian Y., Ramanathan, Muthalagu, Khedr, Salwa, Selove, William, Woda, Bruce, Miron, Patricia M., Higgins, Anne W., and Gerber, Jonathan M.
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NATURAL history ,HEMATOPOIESIS ,DISEASE risk factors ,RECURSIVE partitioning ,HEMATOLOGY - Abstract
Summary: Recursive partitioning of healthy consortia led to the development of the Clonal Hematopoiesis Risk Score (CHRS) for clonal haematopoiesis (CH); however, in the practical setting, most cases of CH are diagnosed after patients present with cytopenias or related symptoms. To address this real‐world population, we characterize the clinical trajectories of 94 patients with CH and distinguish CH harbouring canonical DNMT3A/TET2/ASXL1 mutations alone ('sole DTA') versus all other groups ('non‐sole DTA'). TET2, rather than DNMT3A, was the most prevalent mutation in the real‐world setting. Sole DTA patients did not progress to myeloid neoplasm (MN) in the absence of acquisition of other mutations. Contrastingly, 14 (20.1%) of 67 non‐sole DTA patients progressed to MN. CHRS assessment showed a higher frequency of high‐risk CH in non‐sole DTA (vs. sole DTA) patients and in progressors (vs. non‐progressors). RUNX1 mutation conferred the strongest risk for progression to MN (odds ratio [OR] 10.27, 95% CI 2.00–52.69, p = 0.0053). The mean variant allele frequency across all genes was higher in progressors than in non‐progressors (36.9% ± 4.62% vs. 24.1% ± 1.67%, p = 0.0064). This analysis in the post‐CHRS era underscores the natural history of CH, providing insight into patterns of progression to MN. [ABSTRACT FROM AUTHOR]
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- 2024
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3. The Association of Anticoagulation Intensity with Outcomes in Hospitalized COVID-19 Patients.
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Zheng, Rena, Solomon, Alexandra, DiLorenzo, Madeline, Rajendran, Iniya, Park, Joseph, Dhongade, Vrushali, Garcia, Michael A., Eberhardt, Robert T., Sloan, John Mark, Weinberg, Janice, and Klings, Elizabeth S.
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THROMBOEMBOLISM risk factors , *ANTICOAGULANTS , *RISK assessment , *HOSPITAL care , *VEINS , *MULTIPLE organ failure , *SCIENTIFIC observation , *HOSPITAL mortality , *FIBRIN fibrinogen degradation products , *RETROSPECTIVE studies , *MULTIVARIATE analysis , *LONGITUDINAL method , *ODDS ratio , *INTENSIVE care units , *THROMBOEMBOLISM , *CONFIDENCE intervals , *COVID-19 , *HEMORRHAGE ,THROMBOEMBOLISM prevention - Abstract
Venous thromboembolism (VTE) risk is increased in patients infected with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). A key question was whether increased intensity of anticoagulation would help prevent VTE and improve patient outcomes, including transfer to the intensive care unit (ICU) and mortality. At the start of the coronavirus disease-19 (COVID-19) pandemic, our institution, Boston Medical Center, instituted a VTE risk stratification protocol based on patients' initial D-dimer levels, medical history, and presence of thrombosis to determine whether they should receive standard-dose prophylaxis, high-dose prophylaxis, or therapeutic anticoagulation. We performed a retrospective observational cohort study examining the association of degree of anticoagulation with outcomes in 915 hospitalized COVID-19 patients hospitalized initially on the general inpatient wards between March 1,, 2020, and June 1, 2020. Patients directly hospitalized in the ICU were excluded. Most, 813 patients (89%), in our cohort were on standard-dose prophylaxis; 32 patients (3.5%) received high-dose prophylaxis; 70 patients (7.7%), were treated with therapeutic anticoagulation. VTE occurred in 45 patients (4.9%), and the overall in-hospital mortality rate was 5.4% (49 deaths). On multivariable analysis of clinical outcomes in relation to type of anticoagulation, in the high-dose prophylaxis group, there was a trend towards increased in-hospital mortality (odds ratio 2.4 (0.8–7.5, 95% CI)) and increased ICU transfer (odds ratio 2.2 (0.9-5.7, 95% CI)). Our results suggest that patients receiving high-dose prophylaxis had more severe disease that was not mitigated by intermediate-dose anticoagulation. [ABSTRACT FROM AUTHOR]
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- 2024
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4. Natural History of Patients with Clonal Hematopoiesis Seen in Hematology Clinics
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Patel, Shyam A, primary, Gerber, William K, additional, Hutchinson, Lloyd, additional, Khanna, Shrinkhala, additional, Cerny, Jan, additional, Ramanathan, Muthalagu, additional, Gillis-Smith, Andrew, additional, Suzuki, Sakiko, additional, Abel, Gregory A., additional, Khedr, Salwa, additional, Selove, William, additional, Woda, Bruce, additional, Zheng, Rena, additional, Miron, Patricia Minehart, additional, Higgins, Anne, additional, and Gerber, Jonathan M, additional
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- 2022
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5. The Impact of Degree of Anticoagulation on Thrombotic and Other Complications in Hospitalized COVID-19 Patients
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Zheng, Rena, primary, Solomon, Alexandra, additional, DiLorenzo, Madeline, additional, Rajendran, Iniya, additional, Park, Joseph, additional, Dhongade, Vrushali, additional, Garcia, Michael, additional, Walkey, Allan, additional, Eberhardt, Robert, additional, Sloan, John Mark, additional, Weinberg, Janice, additional, and Klings, Elizabeth S, additional
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- 2021
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6. Role of dynamin, synaptojanin, and endophilin in podocyte foot processes
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Soda, Keita, Balkin, Daniel M., Ferguson, Shawn M., Paradise, Summer, Milosevic, Ira, Giovedi, Silvia, Volpicelli-Daley, Laura, Tian, Xuefei, Wu, Yumei, Ma, Hong, Son, Sung Hyun, Zheng, Rena, Moeckel, Gilbert, Cremona, Ottavio, Holzman, Lawrence B., de Camilli, Pietro, and Ishibe, Shuta
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Genetic aspects ,Research ,Properties ,Kidney -- Genetic aspects ,Actin -- Properties ,Epithelial cells -- Genetic aspects ,Endocytosis -- Genetic aspects ,Gene expression -- Research ,Kidneys -- Genetic aspects - Abstract
Introduction Nephrotic syndrome is a severe kidney disease involving massive protein loss in the urine due to an impairment of the glomerular filtration barrier between the blood and the urinary [...], Podocytes are specialized cells that play an integral role in the renal glomerular filtration barrier via their foot processes. The foot processes form a highly organized structure, the disruption of which causes nephrotic syndrome. Interestingly, several similarities have been observed between mechanisms that govern podocyte organization and mechanisms that mediate neuronal synapse development. Dynamin, synaptojanin, and endophilin are functional partners in synaptic vesicle recycling via interconnected actions in clathrin-mediated endocytosis and actin dynamics in neurons. A role of dynamin in the maintenance of the kidney filtration barrier via an action on the actin cytoskeleton of podocytes was suggested. Here we used a conditional double-KO of dynamin 1 (Dnm1) and Dnm2 in mouse podocytes to confirm dynamin's role in podocyte foot process maintenance. In addition, we demonstrated that while synaptojanin 1 (Synj1) KO mice and endophilin 1 (Sh3gl2), endophilin 2 (Sh3gl1), and endophilin 3 (Sh3gl3) triple-KO mice had grossly normal embryonic development, these mutants failed to establish a normal filtration barrier and exhibited severe proteinuria due to abnormal podocyte foot process formation. These results strongly implicate a protein network that functions at the interface between endocytosis and actin at neuronal synapses in the formation and maintenance of the kidney glomerular filtration barrier.
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- 2012
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7. Sole DNMT3A/TET2/ASXL1 Mutations Define a Distinct Clinical Trajectory for Patients with Clonal Hematopoiesis
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Patel, Shyam Ajay, Gerber, William K, Zheng, Rena, Khanna, Shrinkhala, Hutchinson, Lloyd, Cerny, Jan, Dasilva, Brandon, Zhang, Tian Y., Khedr, Salwa, Selove, William, Woda, Bruce, Abel, Gregory A, Miron, Patricia Minehart, Higgins, Anne, and Gerber, Jonathan M.
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- 2023
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8. Cigarettes vs. Electronic Cigarettes
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Zheng, Rena, Cheung, Ryan, and Fagan, Julie M.
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education - Abstract
The dangers of cigarettes and the regulation of electronic and conventional cigarettes, Cigarettes have been a long-standing issue in the United States for many years already, but we want to raise awareness about newer alternatives to smoking cigarettes. There have been numerous public service announcements, programs, charities, organizations, government bills and laws, advertisements, commercials and so much more to raise awareness and educate people on the dangers of smoking cigarettes. After so many years of redundancy, the American people have been drilled with the unhealthy consequences of smoking, but current smokers have limited choices when it comes to alternative smoking choices and nicotine replacements. We want to raise awareness about the newest alternative recently introduced into world of quitting smoking: electronic cigarettes. These “esmokes” were invented recently and claim to be a tobacco-free device that delivers only nicotine to the smoker, and on exhalation the smoker only blows out water vapor. In theory, this seems like a practical and useful tool to help smokers quit, but several questions and controversies will arise. Who and where can electronic cigarettes be sold? Who is allowed to manufacture them? How much nicotine should be in the device? We have decided to write a prototype of a legislative bill to regulate the manufacture and distribution of electronic cigarettes.
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- 2011
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9. The function of GATA factors in the adult liver
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Zheng, Rena and Zheng, Rena
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GATA transcription factors and Friend of GATA (FOG) cofactors play key roles in the development of a variety of tissues. GATA factors have also been implicated in the pathogenesis of cancers. Mice with a mutation in Fog1 that prevents the recruitment of the nucleosome remodeling and deacetylase complex have an increased propensity of developing liver tumors. Because FOG requires GATA factors for direct recruitment to genes, this implies that FOG via GATA factors functions in a liver tumor suppressor pathway. Despite the necessity of GATA factors in liver development, it is unknown whether they have a role in the adult liver, particularly in hepatocytes, the key parenchymal cell. We examined the expression of GATA and FOG family members in the whole liver and purified hepatocytes and found that GATA4, GATA6, and FOG1 are predominantly expressed. GATA4 chromatin immunoprecipitation followed by deep sequencing in the liver was performed to investigate transcriptional programs that may be regulated by GATA4. Thousands of target genes with liver specific ontologies were bound by GATA4 in vivo, indicating that it could potentially regulate genes important to hepatic functions. To determine its requirement for adult liver function, we conditionally deleted Gata4 in hepatocytes. Although there was robust Gata4 excision, these mice had normal liver histology and serum protein levels. Transcriptome analysis revealed a small subset of differentially expressed genes with ontologies related to liver function. Because both Gata4 and Gata6 are expressed in the liver, redundancy between the factors may account for the mild hepatic phenotype. To address whether GATA6 could play a compensatory role in the absence of GATA4, we performed Gata4 and Gata6 double excision in hepatocytes. Again histology and serum protein levels were not significantly perturbed. Microarray analysis showed a larger number of downregulated genes in the Gata4,6 deficient hepatocytes, indicating that GATA4 and
- Published
- 2013
10. Sole DNMT3A/TET2/ASXL1Mutations Define a Distinct Clinical Trajectory for Patients with Clonal Hematopoiesis
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Patel, Shyam Ajay, Gerber, William K, Zheng, Rena, Khanna, Shrinkhala, Hutchinson, Lloyd, Cerny, Jan, Dasilva, Brandon, Zhang, Tian Y., Khedr, Salwa, Selove, William, Woda, Bruce, Abel, Gregory A, Miron, Patricia Minehart, Higgins, Anne, and Gerber, Jonathan M.
- Abstract
Background:Clonal hematopoiesis of indeterminate potential (CHIP) is a clinically defined entity that is recognized by the 2022 International Consensus Classification and the 5 thEdition of the WHO. While the Clonal Hematopoiesis Risk Score (CHRS) incorporates 8 variables that underlie a prognostic framework for prediction of risk for progression to myeloid neoplasm (MN) (Weeks LD et al., NEJM Evidence2023), there remains debate as to the role of mutations in epigenetic regulators, such as DNMT3A, TET2and ASXL1(“DTA”), with respect to clinical outcomes in the real-world setting. Although DTA mutations often occur early in myeloid pathogenesis, the persistence of these mutations as age-related clonal hematopoiesis (CH) might not significantly influence clinical course (Jongen-Lavrencic M et al., NEJM2018). We have previously observed impaired clearance of DTA-mutant clones with hypomethylating agent or intensive chemotherapy for myelodysplastic neoplasms and acute myeloid leukemia (ASH abstract 4122; Blood(2022) 140 (Supplement 1): 9150-9151), and we now seek to understand the impact of sole DTA mutations in patients with CH.
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- 2023
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11. Function of GATA Factors in the Adult Mouse Liver
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Zheng, Rena, primary, Rebolledo-Jaramillo, Boris, additional, Zong, Yiwei, additional, Wang, Liqing, additional, Russo, Pierre, additional, Hancock, Wayne, additional, Stanger, Ben Z., additional, Hardison, Ross C., additional, and Blobel, Gerd A., additional
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- 2013
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12. Cdc42-interacting protein–4 functionally links actin and microtubule networks at the cytolytic NK cell immunological synapse
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Banerjee, Pinaki P., primary, Pandey, Rahul, additional, Zheng, Rena, additional, Suhoski, Megan M., additional, Monaco-Shawver, Linda, additional, and Orange, Jordan S., additional
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- 2007
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13. The PennScience Experience: Lessons Learned Working on an Undergraduate Research Journal
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Morris, Alexis, primary, Zheng, Rena, additional, Kulp, Angela, additional, Bokreta, M'hamed, additional, and Santiago-Aviles, Jorge, additional
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- 2006
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14. GATA Transcription Factors and Cancer
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Zheng, Rena and Blobel, Gerd A.
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It has been almost a quarter century since it was first appreciated that a class of oncogenes contained in rapidly transforming avian retroviruses encoded DNA-binding transcription factors. As with other oncogenes, genetic recombination with the viral genome led to their overexpression or functional alteration. In the years that followed, alterations of numerous transcription factors were shown to be causatively involved in various cancers in human patients and model organisms. Depending on their normal cellular functions, these factors were subsequently categorized as proto-oncogenes or tumor suppressor genes. This review focuses on the role of GATA transcription factors in carcinogenesis. GATA factors are zinc finger DNA binding proteins that control the development of diverse tissues by activating or repressing transcription. GATA factors thus coordinate cellular maturation with proliferation arrest and cell survival. Therefore, a role of this family of genes in human cancers is not surprising. Prominent examples include structural mutations in GATA1 that are found in almost all megakaryoblastic leukemias in patients with Down syndrome; loss of GATA3 expression in aggressive, dedifferentiated breast cancers; and silencing of GATA4 and GATA5 expression in colorectal and lung cancers. Here, we discuss possible mechanisms of carcinogenesis vis-à-vis the normal functions of GATA factors as they pertain to human patients and mouse models of cancer.
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- 2010
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15. Cdc42-interacting protein-4 functionally links actin and microtubule networks at the cytolytic NK cell immunological synapse.
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Banerjee PP, Pandey R, Zheng R, Suhoski MM, Monaco-Shawver L, and Orange JS
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- Cell Line, Cell Polarity, Cell Shape, Gene Expression Regulation, Humans, Killer Cells, Natural cytology, Microtubule-Associated Proteins genetics, Microtubule-Organizing Center metabolism, Minor Histocompatibility Antigens, Protein Binding, Wiskott-Aldrich Syndrome Protein metabolism, cdc42 GTP-Binding Protein metabolism, Actins metabolism, Cytosol immunology, Cytosol metabolism, Killer Cells, Natural immunology, Killer Cells, Natural metabolism, Microtubule-Associated Proteins metabolism, Microtubules metabolism
- Abstract
An essential function of the immunological synapse (IS) is directed secretion. NK cells are especially adept at this activity, as they direct lytic granules to the synapse for secretion, which enables cytotoxicity and facilitates host defense. This initially requires rearrangement of the actin cytoskeleton and, subsequently, microtubule-dependent trafficking of the lytic granules. As these two steps are sequential, specific linkages between them are likely to serve as critical regulators of cytotoxicity. We studied Cdc42-interacting protein-4 (CIP4), which constitutively interacts with tubulin and microtubules but focuses to the microtubule organizing center (MTOC) after NK cell activation, when it is able to associate with Wiskott-Aldrich syndrome protein (WASp) and the actin filament-rich IS. WASp deficiency, overexpression of CIP4, or parts of CIP4 interfere with this union and block normal CIP4 localization, MTOC polarization to the IS, and cytotoxicity. Reduction of endogenous CIP4 expression using small interfering RNA similarly inhibits MTOC polarization and cytotoxic activity but does not impair actin filament accumulation at the IS, or Cdc42 activation. Thus, CIP4 is an important cytoskeletal adaptor that functions after filamentous actin accumulation and Cdc42 activation to enable MTOC polarization and NK cell cytotoxicity.
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- 2007
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