Search

Demethylation inhibitors (DMIs), including prochloraz, are popular fungicides to control citrus postharvest pathogens such as Penicillium digitatum (green mold). However, many P. digitatum strains have developed prochloraz resistance, which decreases drug efficacy. Specific major facilitator superfamily (MFS) transporter gene mfs2, encoding drug-efflux pump protein MFS2, has been identified in P. digitatum strain F6 (PdF6) to confer fungal strain prochloraz resistance. However, except for the drug-efflux pump function of MFS2, other mechanisms relating to the Pdmfs2 are not fully clear. The present study reported a transcriptome investigation on the mfs2-defective P. digitatum strain. Comparing to the wild-type strain, the mfs2-defective strain showed 717 differentially expressed genes (DEGs) without prochloraz induction, and 1221 DEGs with prochloraz induction. The obtained DEGs included multiple isoforms of MFS transporter-encoding genes, ATP-binding cassette (ABC) transporter-encoding genes, and multidrug and toxic compound extrusion (MATE) family protein-encoding genes. Many of these putative drug-efflux pump protein-encoding genes had significantly lower transcript abundances in the mfs2-defective P. digitatum strain at prochloraz induction, as compared to the wild-type strain, including twenty-two MFS transporter-encoding genes (MFS1 to MFS22), two ABC transporter-encoding genes (ABC1 and ABC2), and three MATE protein-encoding genes (MATE1 to MATE3). The prochloraz induction on special drug-efflux pump protein genes in the wild-type strain was not observed in the mfs2-defective strain, including MFS21, MFS22, ABC2, MATE1, MATE2, and MATE3. On the other hand, the up-regulation of other drug-efflux pump protein genes in the mfs2-defective strain cannot recover the fungal prochloraz resistance, including MFS23, MFS26, MFS27, MFS31, MFS33, and ABC3 to ABC8. The functional enrichment of DEGs based on Kyoto Encyclopedia of Genes and Genomes (KEGG), Clusters of Orthologous Groups (COG), and euKaryotic Orthologous Groups (KOG) database resources suggested some essential contributors to the mfs2-relating prochloraz resistance, including ribosome biosynthesis-related genes, oxidative phosphorylation genes, steroid biosynthesis-related genes, fatty acid and lipid metabolism-related genes, and carbon- and nitrogen-metabolism-related genes. The results indicated that the MFS2 transporter might be involved in the regulation of multiple drug-efflux pump protein gene expressions and multiple metabolism-related gene expressions, thus playing an important role in developing P. digitatum prochloraz resistance. [ABSTRACT FROM AUTHOR]

Multiple-point geostatistics (MPS) has more advantages than two-point geostatistics in reproducing the continuity of geobodies in subsurface reservoir modeling. For fluvial reservoir modeling, the more continuous a channel, the more consistent it is with geological knowledge in general, and fluvial continuity is also of paramount importance when simulating fluid flow. Based on the pixel-based MPS algorithm Snesim, this study proposes a method that utilizes multiple search trees (MSTs) to enhance simulation continuity in 2D fluvial reservoir modeling. The objective of the MST method is to capture complete data events from a training image (TI), which aims to achieve enhanced continuity in fluvial reservoir sublayer modeling. By resorting to search neighborhoods based on their proximity to the central node of the data template, multiple data templates that correspond to the MSTs will be generated. Here, four data templates were generated by arranging the relative search neighborhood coordinates in ascending and descending order with respect to the central node. Parallel computing was tried for the construction of the search trees. This work calculated the conditional probability distribution function (CPDF) of the simulating nodes by averaging the CPDFs derived from the MSTs, and double retrieval was employed to filter out the search trees that possessed an inaccurate local CPDF for the simulating nodes. In addition, the connected component labeling (CCL) method was introduced to evaluate the simulation continuity in MPS. The results indicated that the MST method can enhance the simulation continuity of the Snesim algorithm by reproducing the fine connectivity of channel facies in 2D fluvial reservoir modeling. [ABSTRACT FROM AUTHOR]