4,351 results on '"actin-binding protein"'
Search Results
2. Increased prevalence of the null allele of the p.Arg577Ter variant in the ACTN3 gene in Brazilian long‐distance athletes: A retrospective study.
- Author
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Guilherme, João Paulo Limongi França and Oliveira, Edilamar Menezes
- Subjects
- *
ENDURANCE athletes , *GENETIC polymorphisms , *ENDURANCE sports , *GENETIC variation , *GENOTYPES - Abstract
Introduction: The phenotypic consequences of the p.Arg577Ter variant in the α‐actinin‐3 (ACTN3) gene are suggestive of a trade‐off between performance traits for speed and endurance sports. Although there is a consistent association of the c.1729C allele (aka R allele) with strength/power traits, there is still a debate on whether the null allele (c.1729T allele; aka X allele) influences endurance performance. The present study aimed to test the association of the ACTN3 p.Arg577Ter variant with long‐distance endurance athlete status, using previously published data with the Brazilian population. Methods: Genotypic data from 203 long‐distance athletes and 1724 controls were analysed in a case–control approach. Results: The frequency of the X allele was significantly higher in long‐distance athletes than in the control group (51.5% vs. 41.4%; p = 0.000095). The R/X and X/X genotypes were overrepresented in the athlete group. Individuals with the R/X genotype instead of the R/R genotype had a 1.6 increase in the odds of being a long‐distance athlete (p = 0.012), whereas individuals with the X/X genotype instead of the R/R genotype had a 2.2 increase in the odds of being a long‐distance athlete (p = 0.00017). Conclusion: The X allele, mainly the X/X genotype, was associated with long‐distance athlete status in Brazilians. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. PLS3 missense variants affecting the actin-binding domains cause X-linked congenital diaphragmatic hernia and body-wall defects.
- Author
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Petit, Florence, Longoni, Mauro, Wells, Julie, Maser, Richard, Bogenschutz, Eric, Dysart, Matthew, Contreras, Hannah, Frénois, Frederic, Pober, Barbara, Clark, Robin, Giampietro, Philip, Ropers, Hilger, Hu, Hao, Loscertales, Maria, Wagner, Richard, Ai, Xingbin, Brand, Harrison, Jourdain, Anne-Sophie, Delrue, Marie-Ange, Gilbert-Dussardier, Brigitte, Devisme, Louise, Keren, Boris, McCulley, David, Qiao, Lu, Hernan, Rebecca, Wynn, Julia, Scott, Tiana, Calame, Daniel, Coban-Akdemir, Zeynep, Hernandez, Patricia, Hernandez-Garcia, Andres, Yonath, Hagith, Lupski, James, Shen, Yufeng, Chung, Wendy, Scott, Daryl, Bult, Carol, Donahoe, Patricia, and High, Frances
- Subjects
PLS3 ,plastin ,X-linked ,abdominal hernia ,actin-binding protein ,congenital diaphragmatic hernia ,fimbrin ,omphalocele ,umbilical hernia ,Adult ,Humans ,Male ,Animals ,Mice ,Hernias ,Diaphragmatic ,Congenital ,Actins ,Mutation ,Missense ,Osteoporosis - Abstract
Congenital diaphragmatic hernia (CDH) is a relatively common and genetically heterogeneous structural birth defect associated with high mortality and morbidity. We describe eight unrelated families with an X-linked condition characterized by diaphragm defects, variable anterior body-wall anomalies, and/or facial dysmorphism. Using linkage analysis and exome or genome sequencing, we found that missense variants in plastin 3 (PLS3), a gene encoding an actin bundling protein, co-segregate with disease in all families. Loss-of-function variants in PLS3 have been previously associated with X-linked osteoporosis (MIM: 300910), so we used in silico protein modeling and a mouse model to address these seemingly disparate clinical phenotypes. The missense variants in individuals with CDH are located within the actin-binding domains of the protein but are not predicted to affect protein structure, whereas the variants in individuals with osteoporosis are predicted to result in loss of function. A mouse knockin model of a variant identified in one of the CDH-affected families, c.1497G>C (p.Trp499Cys), shows partial perinatal lethality and recapitulates the key findings of the human phenotype, including diaphragm and abdominal-wall defects. Both the mouse model and one adult human male with a CDH-associated PLS3 variant were observed to have increased rather than decreased bone mineral density. Together, these clinical and functional data in humans and mice reveal that specific missense variants affecting the actin-binding domains of PLS3 might have a gain-of-function effect and cause a Mendelian congenital disorder.
- Published
- 2023
4. Role of actin-binding proteins in prostate cancer.
- Author
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Fangzhi Fu, Yunfeng Yu, Bo Zou, Yan Long, Litong Wu, Jubo Yin, and Qing Zhou
- Subjects
MICROFILAMENT proteins ,PROSTATE cancer ,PROSTATE diseases ,ARRAY processing ,DISEASE management ,METASTASIS ,ANDROGEN receptors - Abstract
The molecular mechanisms driving the onset and metastasis of prostate cancer remain poorly understood. Actin, under the control of actin-binding proteins (ABPs), plays a crucial role in shaping the cellular cytoskeleton, which in turn supports the morphological alterations in normal cells, as well as the invasive spread of tumor cells. Previous research indicates that ABPs of various types serve distinct functions, and any disruptions in their activities could predispose individuals to prostate cancer. These ABPs are intricately implicated in the initiation and advancement of prostate cancer through a complex array of intracellular processes, such as severing, linking, nucleating, inducing branching, assembling, facilitating actin filament elongation, terminating elongation, and promoting actin molecule aggregation. As such, this review synthesizes existing literature on several ABPs linked to prostate cancer, including cofilin, filamin A, and fascin, with the aim of shedding light on the molecular mechanisms through which ABPs influence prostate cancer development and identifying potential therapeutic targets. Ultimately, this comprehensive examination seeks to contribute to the understanding and management of prostate diseases. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
5. The Potential for Targeting AVIL and Other Actin-Binding Proteins in Rhabdomyosarcoma.
- Author
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Cornelison, Robert, Marrah, Laine, Fierti, Adelaide, Piczak, Claire, Glowczyk, Martyna, Tajammal, Anam, Lynch, Sarah, and Li, Hui
- Subjects
- *
RHABDOMYOSARCOMA , *NEOPLASTIC cell transformation , *MESENCHYMAL stem cells , *INFRASTRUCTURE (Economics) , *GENETIC overexpression , *MICROFILAMENT proteins , *CYTOSKELETAL proteins - Abstract
Rhabdomyosarcoma (RMS) is the most common pediatric soft-tissue cancer with a survival rate below 27% for high-risk children despite aggressive multi-modal therapeutic interventions. After decades of research, no targeted therapies are currently available. Therapeutically targeting actin-binding proteins, although promising, has historically been challenging. Recent advances have made this possibility more salient, including our lab's identification of advillin (AVIL), a novel oncogenic actin-binding protein that plays a role in many cytoskeletal functions. AVIL is overexpressed in many RMS cell lines, patient-derived xenograft models, and a cohort of 30 clinical samples of both the alveolar (ARMS) and embryonal (ERMS) subtypes. Overexpression of AVIL in mesenchymal stem cells induces neoplastic transformation both in vitro and in vivo, and reversing overexpression through genetic modulation reverses the transformation. This suggests a critical role of AVIL in RMS tumorigenesis and maintenance. As an actin-binding protein, AVIL would not traditionally be considered a druggable target. This perspective will address the feasibility of targeting differentially expressed actin-binding proteins such as AVIL therapeutically, and how critical cell infrastructure can be damaged in a cancer-specific manner. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
6. Recombinant actin-depolymerizing factor of the apicomplexan Neospora caninum (NcADF) is susceptible to oxidation.
- Author
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Baroni, Luciana, Gama Abreu-Filho, Péricles, Miguel Pereira, Luiz, Nagl, Markus, and Yatsuda, Ana Patricia
- Subjects
NEOSPORA caninum ,MICROFILAMENT proteins ,RECOMBINANT proteins ,DEPOLYMERIZATION ,DRUG target ,POLYMERIZATION - Abstract
Neospora caninum is a member of Apicomplexa Phylum and the causative agent of neosporosis, a disease responsible for abortions in cattle. Apicomplexan parasites have a limited set of actin-binding proteins conducting the regulation of the dynamics of nonconventional actin. The parasite actin-based motility is implicated in the parasite invasion process in the host cell. Once no commercial strategy for the neosporosis control is available, the interference in the parasite actin function may result in novel drug targets. Actin-depolymerization factor (ADF) is a member of the ADF/cofilin family, primarily known for its function in actin severing and depolymerization. ADF/cofilins are versatile proteins modulated by different mechanisms, including reduction and oxidation. In apicomplexan parasites, the mechanisms involved in the modulation of ADF function are barely explored and the effects of oxidation in the protein are unknown so far. In this study, we used the oxidants N-chlorotaurine (NCT) and H
2 O2 to investigate the susceptibility of the recombinant N. caninum ADF (NcADF) to oxidation. After exposing the protein to either NCT or H2 O2 , the dimerization status and cysteine residue oxidation were determined. Also, the interference of NcADF oxidation in the interaction with actin was assessed. The treatment of the recombinant protein with oxidants reversibly induced the production of dimers, indicating that disulfide bonds between NcADF cysteine residues were formed. In addition, the exposure of NcADF to NCT resulted in more efficient oxidation of the cysteine residues compared to H2 O2 . Finally, the oxidation of NcADF by NCT reduced the ability of actin-binding and altered the function of NcADF in actin polymerization. Altogether, our results clearly show that recombinant NcADF is sensitive to redox conditions, indicating that the function of this protein in cellular processes involving actin dynamics may be modulated by oxidation. [ABSTRACT FROM AUTHOR]- Published
- 2022
- Full Text
- View/download PDF
7. Recombinant actin-depolymerizing factor of the apicomplexan Neospora caninum (NcADF) is susceptible to oxidation
- Author
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Luciana Baroni, Péricles Gama Abreu-Filho, Luiz Miguel Pereira, Markus Nagl, and Ana Patricia Yatsuda
- Subjects
actin-depolymerizing factor (ADF) ,Neospora caninum ,Apicomplexa ,actin-binding protein ,redox ,N-chlorotaurine ,Microbiology ,QR1-502 - Abstract
Neospora caninum is a member of Apicomplexa Phylum and the causative agent of neosporosis, a disease responsible for abortions in cattle. Apicomplexan parasites have a limited set of actin-binding proteins conducting the regulation of the dynamics of nonconventional actin. The parasite actin-based motility is implicated in the parasite invasion process in the host cell. Once no commercial strategy for the neosporosis control is available, the interference in the parasite actin function may result in novel drug targets. Actin-depolymerization factor (ADF) is a member of the ADF/cofilin family, primarily known for its function in actin severing and depolymerization. ADF/cofilins are versatile proteins modulated by different mechanisms, including reduction and oxidation. In apicomplexan parasites, the mechanisms involved in the modulation of ADF function are barely explored and the effects of oxidation in the protein are unknown so far. In this study, we used the oxidants N-chlorotaurine (NCT) and H2O2 to investigate the susceptibility of the recombinant N. caninum ADF (NcADF) to oxidation. After exposing the protein to either NCT or H2O2, the dimerization status and cysteine residue oxidation were determined. Also, the interference of NcADF oxidation in the interaction with actin was assessed. The treatment of the recombinant protein with oxidants reversibly induced the production of dimers, indicating that disulfide bonds between NcADF cysteine residues were formed. In addition, the exposure of NcADF to NCT resulted in more efficient oxidation of the cysteine residues compared to H2O2. Finally, the oxidation of NcADF by NCT reduced the ability of actin-binding and altered the function of NcADF in actin polymerization. Altogether, our results clearly show that recombinant NcADF is sensitive to redox conditions, indicating that the function of this protein in cellular processes involving actin dynamics may be modulated by oxidation.
- Published
- 2022
- Full Text
- View/download PDF
8. Microscopic studies on severing properties of actin-binding protein: its potential use in therapeutic treatment of actin-rich inclusions
- Author
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Han-ul Kim, Anahita Vispi Bharda, Jeong Chan Moon, Dooil Jeoung, Jeong Min Chung, and Hyun Suk Jung
- Subjects
Transmission electron microscopy ,Actin ,Gelsolin ,Actin-binding protein ,Actin-severing protein ,Hirano body ,Chemistry ,QD1-999 ,Analytical chemistry ,QD71-142 - Abstract
Abstract Actin is an important unit of the cytoskeletal system, involved in many cellular processes including cell motility, signaling, and intracellular trafficking. Various studies have been undertaken to understand the regulatory mechanisms pertaining actin functions, especially the ones controlled by actin-binding proteins. However, not much has been explored about the molecular aspects of these proteins implicated in various diseases. In this study, we aimed to demonstrate the molecular properties of gelsolin, an actin-severing protein on the disassembly of the aggregation of actin-rich intracellular inclusions, Hirano body. We observed a decreasing tendency of actin aggregation by co-sedimentation assay and transmission electron microscopy in the presence of gelsolin. Therefore, we provide suggestive evidence for the use of actin-severing protein in novel therapeutic strategies for neurodegenerative conditions.
- Published
- 2021
- Full Text
- View/download PDF
9. Structural and functional characterization of a plant alpha‐actinin
- Author
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Karina Persson and Lars Backman
- Subjects
actin‐binding protein ,Rhodamnia argentea ,spectrin repeat ,α‐actinin ,Biology (General) ,QH301-705.5 - Abstract
The Australian tree malletwood (Rhodamnia argentea) is unique. The genome of malletwood is the only known plant genome that contains a gene coding for an α‐actinin‐like protein. Several organisms predating the animal‐plant bifurcation express an α‐actinin or α‐actinin‐like protein. Therefore, it appears that plants in general, but not malletwood, have lost the α‐actinin or α‐actinin‐like gene during evolution. In order to characterize its structure and function, we synthesized the gene and expressed the recombinant R. argentea protein. The results clearly show that this protein has all properties of genuine α‐actinin. The N‐terminal actin‐binding domain (ABD), with two calponin homology motifs, is very similar to the ABD of any α‐actinin. The C‐terminal calmodulin‐like domain, as well as the intervening rod domain, are also similar to the corresponding regions in other α‐actinins. The R. argentea α‐actinin‐like protein dimerises in solution and thereby can cross‐link actin filaments. Based on these results, we believe the R. argentea protein represents a genuine α‐actinin, making R. argentea unique in the plant world.
- Published
- 2021
- Full Text
- View/download PDF
10. The Actin-Binding Protein Cortactin Promotes Sepsis Severity by Supporting Excessive Neutrophil Infiltration into the Lung.
- Author
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Lartey, Nathaniel L., Vargas-Robles, Hilda, Guerrero-Fonseca, Idaira M., García-Ponce, Alexander, Salinas-Lara, Citlaltepetl, Rottner, Klemens, and Schnoor, Michael
- Subjects
MICROFILAMENT proteins ,NEUTROPHILS ,SEPSIS ,CYTOKINE release syndrome ,LUNGS - Abstract
Sepsis is a systemic infection that can lead to multi-organ failure. It is characterised by an uncontrolled immune response with massive neutrophil influx into peripheral organs. Neutrophil extravasation into tissues depends on actin remodeling and actin-binding proteins such as cortactin, which is expressed ubiquitously, except for neutrophils. Endothelial cortactin is necessary for proper regulation of neutrophil transendothelial migration and recruitment to sites of infection. We therefore hypothesised that cortactin plays a crucial role in sepsis development by regulating neutrophil trafficking. Using a murine model of sepsis induced by cecal ligation and puncture (CLP), we showed that cortactin-deficient (KO) mice survive better due to reduced lung injury. Histopathological analysis of lungs from septic KO mice revealed absence of oedema, reduced vascular congestion and mucus deposition, and better-preserved alveoli compared to septic wild-type (WT) mice. Additionally, sepsis-induced cytokine storm, excessive neutrophil infiltration into the lung and oxidative stress were significantly reduced in KO mice. Neutrophil depletion 12 h after sepsis improved survival in WT mice by averting lung injury, similar to both neutrophil-depleted and non-depleted KO mice. Our findings highlight a critical role of cortactin for lung neutrophil infiltration and sepsis severity. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
11. Structure and function of an atypical homodimeric actin capping protein from the malaria parasite.
- Author
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Bendes, Ábris Ádám, Kursula, Petri, and Kursula, Inari
- Abstract
Apicomplexan parasites, such as Plasmodium spp., rely on an unusual actomyosin motor, termed glideosome, for motility and host cell invasion. The actin filaments are maintained by a small set of essential regulators, which provide control over actin dynamics in the different stages of the parasite life cycle. Actin filament capping proteins (CPs) are indispensable heterodimeric regulators of actin dynamics. CPs have been extensively characterized in higher eukaryotes, but their role and functional mechanism in Apicomplexa remain enigmatic. Here, we present the first crystal structure of a homodimeric CP from the malaria parasite and compare the homo- and heterodimeric CP structures in detail. Despite retaining several characteristics of a canonical CP, the homodimeric Plasmodium berghei (Pb)CP exhibits crucial differences to the canonical heterodimers. Both homo- and heterodimeric PbCPs regulate actin dynamics in an atypical manner, facilitating rapid turnover of parasite actin, without affecting its critical concentration. Homo- and heterodimeric PbCPs show partially redundant activities, possibly to rescue actin filament capping in life cycle stages where the β-subunit is downregulated. Our data suggest that the homodimeric PbCP also influences actin kinetics by recruiting lateral actin dimers. This unusual function could arise from the absence of a β-subunit, as the asymmetric PbCP homodimer lacks structural elements essential for canonical barbed end interactions suggesting a novel CP binding mode. These findings will facilitate further studies aimed at elucidating the precise actin filament capping mechanism in Plasmodium. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
12. Bundling up the Role of the Actin Cytoskeleton in Primary Root Growth.
- Author
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García-González, Judith and van Gelderen, Kasper
- Subjects
ROOT growth ,MICROFILAMENT proteins ,PLANT hormones ,CELL morphology ,CYTOSKELETON ,ACTIN - Abstract
Primary root growth is required by the plant to anchor in the soil and reach out for nutrients and water, while dealing with obstacles. Efficient root elongation and bending depends upon the coordinated action of environmental sensing, signal transduction, and growth responses. The actin cytoskeleton is a highly plastic network that constitutes a point of integration for environmental stimuli and hormonal pathways. In this review, we present a detailed compilation highlighting the importance of the actin cytoskeleton during primary root growth and we describe how actin-binding proteins, plant hormones, and actin-disrupting drugs affect root growth and root actin. We also discuss the feedback loop between actin and root responses to light and gravity. Actin affects cell division and elongation through the control of its own organization. We remark upon the importance of longitudinally oriented actin bundles as a hallmark of cell elongation as well as the role of the actin cytoskeleton in protein trafficking and vacuolar reshaping during this process. The actin network is shaped by a plethora of actin-binding proteins; however, there is still a large gap in connecting the molecular function of these proteins with their developmental effects. Here, we summarize their function and known effects on primary root growth with a focus on their high level of specialization. Light and gravity are key factors that help us understand root growth directionality. The response of the root to gravity relies on hormonal, particularly auxin, homeostasis, and the actin cytoskeleton. Actin is necessary for the perception of the gravity stimulus via the repositioning of sedimenting statoliths, but it is also involved in mediating the growth response via the trafficking of auxin transporters and cell elongation. Furthermore, auxin and auxin analogs can affect the composition of the actin network, indicating a potential feedback loop. Light, in its turn, affects actin organization and hence, root growth, although its precise role remains largely unknown. Recently, fundamental studies with the latest techniques have given us more in-depth knowledge of the role and organization of actin in the coordination of root growth; however, there remains a lot to discover, especially in how actin organization helps cell shaping, and therefore root growth. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
13. Bundling up the Role of the Actin Cytoskeleton in Primary Root Growth
- Author
-
Judith García-González and Kasper van Gelderen
- Subjects
actin ,root growth ,cell elongation ,auxin ,gravitropism ,actin-binding protein ,Plant culture ,SB1-1110 - Abstract
Primary root growth is required by the plant to anchor in the soil and reach out for nutrients and water, while dealing with obstacles. Efficient root elongation and bending depends upon the coordinated action of environmental sensing, signal transduction, and growth responses. The actin cytoskeleton is a highly plastic network that constitutes a point of integration for environmental stimuli and hormonal pathways. In this review, we present a detailed compilation highlighting the importance of the actin cytoskeleton during primary root growth and we describe how actin-binding proteins, plant hormones, and actin-disrupting drugs affect root growth and root actin. We also discuss the feedback loop between actin and root responses to light and gravity. Actin affects cell division and elongation through the control of its own organization. We remark upon the importance of longitudinally oriented actin bundles as a hallmark of cell elongation as well as the role of the actin cytoskeleton in protein trafficking and vacuolar reshaping during this process. The actin network is shaped by a plethora of actin-binding proteins; however, there is still a large gap in connecting the molecular function of these proteins with their developmental effects. Here, we summarize their function and known effects on primary root growth with a focus on their high level of specialization. Light and gravity are key factors that help us understand root growth directionality. The response of the root to gravity relies on hormonal, particularly auxin, homeostasis, and the actin cytoskeleton. Actin is necessary for the perception of the gravity stimulus via the repositioning of sedimenting statoliths, but it is also involved in mediating the growth response via the trafficking of auxin transporters and cell elongation. Furthermore, auxin and auxin analogs can affect the composition of the actin network, indicating a potential feedback loop. Light, in its turn, affects actin organization and hence, root growth, although its precise role remains largely unknown. Recently, fundamental studies with the latest techniques have given us more in-depth knowledge of the role and organization of actin in the coordination of root growth; however, there remains a lot to discover, especially in how actin organization helps cell shaping, and therefore root growth.
- Published
- 2021
- Full Text
- View/download PDF
14. Coronin-1 is phosphorylated at Thr-412 by protein kinase Cα in human phagocytic cells
- Author
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Teruaki Oku, Yutaka Kaneko, Rie Ishii, Yuki Hitomi, Makoto Tsuiji, Satoshi Toyoshima, and Tsutomu Tsuji
- Subjects
Coronin-1 ,Actin-binding protein ,Protein kinase C ,Phagocytosis ,Phagosome-lysosome fusion ,Biology (General) ,QH301-705.5 ,Biochemistry ,QD415-436 - Abstract
Coronin-1, a hematopoietic cell-specific actin-binding protein, is thought to be involved in the phagocytic process through its interaction with actin filaments. The dissociation of coronin-1 from phagosomes after its transient accumulation on the phagosome surface is associated with lysosomal fusion. We previously reported that 1) coronin-1 is phosphorylated by protein kinase C (PKC), 2) coronin-1 has two phosphorylation sites, Ser-2 and Thr-412, and 3) Thr-412 of coronin-1 is phosphorylated during phagocytosis. In this study, we examined which PKC isoform is responsible for the phosphorylation of coronin-1 at Thr-412 by using isotype-specific PKC inhibitors and small interfering RNAs (siRNAs). Thr-412 phosphorylation of coronin-1 was suppressed by Gö6976, an inhibitor of PKCα and PKCβI. This phosphorylation was attenuated by siRNA for PKCα, but not by siRNA for PKCβ. Furthermore, Thr-412 of coronin-1 was phosphorylated by recombinant PKCα in vitro, but not by recombinant PKCβ. We next examined the effects of Gö6976 on the intracellular distribution of coronin-1 in HL60 cells during phagocytosis. The confocal fluorescence microscopic observation showed that coronin-1 was not dissociated from phagosomes in Gö6976-treated cells. These results indicate that phosphorylation of coronin-1 at Thr-412 by PKCα regulates intracellular distribution during phagocytosis.
- Published
- 2021
- Full Text
- View/download PDF
15. Microscopic studies on severing properties of actin-binding protein: its potential use in therapeutic treatment of actin-rich inclusions.
- Author
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Kim, Han-ul, Bharda, Anahita Vispi, Moon, Jeong Chan, Jeoung, Dooil, Chung, Jeong Min, and Jung, Hyun Suk
- Subjects
TRANSMISSION electron microscopy ,GELSOLIN ,CYTOSKELETAL proteins ,CELL motility ,ACTIN ,MICROFILAMENT proteins - Abstract
Actin is an important unit of the cytoskeletal system, involved in many cellular processes including cell motility, signaling, and intracellular trafficking. Various studies have been undertaken to understand the regulatory mechanisms pertaining actin functions, especially the ones controlled by actin-binding proteins. However, not much has been explored about the molecular aspects of these proteins implicated in various diseases. In this study, we aimed to demonstrate the molecular properties of gelsolin, an actin-severing protein on the disassembly of the aggregation of actin-rich intracellular inclusions, Hirano body. We observed a decreasing tendency of actin aggregation by co-sedimentation assay and transmission electron microscopy in the presence of gelsolin. Therefore, we provide suggestive evidence for the use of actin-severing protein in novel therapeutic strategies for neurodegenerative conditions. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
16. Actin binding to galectin-13/placental protein-13 occurs independently of the galectin canonical ligand-binding site.
- Author
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Li, Xumin, Yao, Yuan, Liu, Tianhao, Gu, Keqi, Han, Qiuyu, Zhang, Wenlu, Ayala, Gabriela Jaramillo, Liu, Yuhan, Na, Heya, Yu, Jinyi, Zhang, Fan, Mayo, Kevin H, and Su, Jiyong
- Subjects
- *
PREGNANCY proteins , *ACTIN , *VASCULAR smooth muscle , *ADENOSINE triphosphate , *HELA cells - Abstract
The gene for galectin-13 (Gal-13, placental protein 13) is only present in primates, and its low expression level in maternal serum may promote preeclampsia. In the present study, we used pull-down experiments and biolayer interferometry to assess the interaction between Gal-13 and actin. These studies uncovered that human Gal-13 (hGal-13) and Saimiri boliviensis boliviensis (sGal-13) strongly bind to α- and β-/γ-actin, with Ca2+ and adenosine triphosphate, significantly enhancing the interactions. This in turn suggests that h/sGal-13 may inhibit myosin-induced contraction when vascular smooth muscle cells undergo polarization. Here, we solved the crystal structure of sGal-13 bound to lactose and found that it exists as a monomer in contrast to hGal-13 which is a dimer. The distribution of sGal-13 in HeLa cells is similar to that of hGal-13, indicating that monomeric Gal-13 is the primary form in cells. Even though sGal-13 binds to actin, hGal-13 ligand-binding site mutants do not influence hGal-13/actin binding, whereas the monomeric mutant C136S/C138S binds to actin more strongly than the wild-type hGal-13. Overall, our study demonstrates that monomeric Gal-13 binds to actin, an interaction that is independent of the galectin canonical ligand-binding site. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
17. Structural and functional characterization of a plant alpha‐actinin.
- Author
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Persson, Karina and Backman, Lars
- Subjects
PLANT genomes ,GENETIC code ,MICROFILAMENT proteins ,SPECTRIN - Abstract
The Australian tree malletwood (Rhodamnia argentea) is unique. The genome of malletwood is the only known plant genome that contains a gene coding for an α‐actinin‐like protein. Several organisms predating the animal‐plant bifurcation express an α‐actinin or α‐actinin‐like protein. Therefore, it appears that plants in general, but not malletwood, have lost the α‐actinin or α‐actinin‐like gene during evolution. In order to characterize its structure and function, we synthesized the gene and expressed the recombinant R. argentea protein. The results clearly show that this protein has all properties of genuine α‐actinin. The N‐terminal actin‐binding domain (ABD), with two calponin homology motifs, is very similar to the ABD of any α‐actinin. The C‐terminal calmodulin‐like domain, as well as the intervening rod domain, are also similar to the corresponding regions in other α‐actinins. The R. argentea α‐actinin‐like protein dimerises in solution and thereby can cross‐link actin filaments. Based on these results, we believe the R. argentea protein represents a genuine α‐actinin, making R. argentea unique in the plant world. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
18. Unidirectional cooperative binding of fimbrin actin-binding domain 2 to actin filament.
- Author
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Hosokawa, Naoki, Kuragano, Masahiro, Yoshino, Atsuki, Shibata, Keitaro, Uyeda, Taro Q.P., and Tokuraku, Kiyotaka
- Subjects
- *
FIBERS , *SURFACE charges , *MICROFILAMENT proteins , *FLUORESCENCE microscopy , *FILOPODIA , *SURFACE interactions , *MYOSIN - Abstract
Fimbrin forms bundles of parallel actin filaments in filopodia, but it remains unclear how fimbrin forms well-ordered bundles. To address this issue, we focused on the cooperative interaction between the actin-binding domain of fimbrin and actin filaments. First, we loosely immobilized actin filaments on a glass surface via a positively charged lipid layer and observed the binding of GFP-fused actin-binding domain 2 of fimbrin using fluorescence microscopy. The actin-binding domain formed low-density clusters with unidirectional growth along actin filaments. When the actin filaments were tightly immobilized to the surface by increasing the charge density of the lipid layer, cluster formation was suppressed. This result suggests that the propagation of cooperative structural changes of actin filaments evoked by binding of the actin-binding domain was suppressed by a strong physical interaction with the glass surface. Interestingly, binding of the fimbrin actin-binding domain shortened the length of loosely immobilized actin filaments. Based on these results, we propose that fimbrin-actin interactions accompanied by unidirectional long-range allostery help the formation of well-ordered parallel actin filament bundles. [Display omitted] • Fimbrin ABD2 formed low-density clusters with unidirectional growth along filaments. • Fimbrin ABD2 cluster formation was suppressed by tight immobilization of filaments. • Fimbrin ABD2-binding shortened the length of actin filaments. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
19. Cofilin: A Promising Protein Implicated in Cancer Metastasis and Apoptosis
- Author
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Jing Xu, Yan Huang, Jimeng Zhao, Luyi Wu, Qin Qi, Yanan Liu, Guona Li, Jing Li, Huirong Liu, and Huangan Wu
- Subjects
cofilin ,actin-binding protein ,apoptosis ,migration ,cancer metastasis ,Biology (General) ,QH301-705.5 - Abstract
Cofilin is an actin-binding protein that regulates filament dynamics and depolymerization. The over-expression of cofilin is observed in various cancers, cofilin promotes cancer metastasis by regulating cytoskeletal reorganization, lamellipodium formation and epithelial-to-mesenchymal transition. Clinical treatment of cancer regarding cofilin has been explored in aspects of tumor cells apoptosis and cofilin related miRNAs. This review addresses the structure and phosphorylation of cofilin and describes recent findings regarding the function of cofilin in regulating cancer metastasis and apoptosis in tumor cells.
- Published
- 2021
- Full Text
- View/download PDF
20. An Update on the Role of the Actin Cytoskeleton in Plasmodesmata: A Focus on Formins
- Author
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Min Diao and Shanjin Huang
- Subjects
intercellular trafficking ,plasmodesmata ,actin ,actin-binding protein ,formin ,Plant culture ,SB1-1110 - Abstract
Cell-to-cell communication in plants is mediated by plasmodesmata (PD) whose permeability is tightly regulated during plant growth and development. The actin cytoskeleton has been implicated in regulating the permeability of PD, but the underlying mechanism remains largely unknown. Recent characterization of PD-localized formin proteins has shed light on the role and mechanism of action of actin in regulating PD-mediated intercellular trafficking. In this mini-review article, we will describe the progress in this area.
- Published
- 2021
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21. Structural and Biochemical Characterization of EFhd1/Swiprosin-2, an Actin-Binding Protein in Mitochondria
- Author
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Sang A. Mun, Jongseo Park, Kyoung Ryoung Park, Youngjin Lee, Jung Youn Kang, Taein Park, Minwoo Jin, Jihyeong Yang, Chang-Duk Jun, and Soo Hyun Eom
- Subjects
EFhd1 ,swiprosin-2 ,crystal structure ,β-actin ,actin-binding protein ,actin-bundling protein ,Biology (General) ,QH301-705.5 - Abstract
Ca2+ regulates several cellular functions, including signaling events, energy production, and cell survival. These cellular processes are mediated by Ca2+-binding proteins, such as EF-hand superfamily proteins. Among the EF-hand superfamily proteins, allograft inflammatory factor-1 (AIF-1) and swiprosin-1/EF-hand domain-containing protein 2 (EFhd2) are cytosolic actin-binding proteins. AIF-1 modulates the cytoskeleton and increases the migration of immune cells. EFhd2 is also a cytoskeletal protein implicated in immune cell activation and brain cell functions. EFhd1, a mitochondrial fraternal twin of EFhd2, mediates neuronal and pro-/pre-B cell differentiation and mitoflash activation. Although EFhd1 is important for maintaining mitochondrial morphology and energy synthesis, its mechanism of action remains unclear. Here, we report the crystal structure of the EFhd1 core domain comprising a C-terminus of a proline-rich region, two EF-hand domains, and a ligand mimic helix. Structural comparisons of EFhd1, EFhd2, and AIF-1 revealed similarities in their overall structures. In the structure of the EFhd1 core domain, two Zn2+ ions were observed at the interface of the crystal contact, suggesting the possibility of Zn2+-mediated multimerization. In addition, we found that EFhd1 has Ca2+-independent β-actin-binding and Ca2+-dependent β-actin-bundling activities. These findings suggest that EFhd1, an actin-binding and -bundling protein in the mitochondria, may contribute to the Ca2+-dependent regulation of mitochondrial morphology and energy synthesis.
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- 2021
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22. Multifunctional Roles of the Actin-Binding Protein Flightless I in Inflammation, Cancer and Wound Healing
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Xanthe L. Strudwick and Allison J. Cowin
- Subjects
Flightless I ,actin-binding protein ,wound healing ,inflammation ,cancer ,Biology (General) ,QH301-705.5 - Abstract
Flightless I is an actin-binding member of the gelsolin family of actin-remodeling proteins that inhibits actin polymerization but does not possess actin severing ability. Flightless I functions as a regulator of many cellular processes including proliferation, differentiation, apoptosis, and migration all of which are important for many physiological processes including wound repair, cancer progression and inflammation. More than simply facilitating cytoskeletal rearrangements, Flightless I has other important roles in the regulation of gene transcription within the nucleus where it interacts with nuclear hormone receptors to modulate cellular activities. In conjunction with key binding partners Leucine rich repeat in the Flightless I interaction proteins (LRRFIP)1/2, Flightless I acts both synergistically and competitively to regulate a wide range of cellular signaling including interacting with two of the most important inflammatory pathways, the NLRP3 inflammasome and the MyD88-TLR4 pathways. In this review we outline the current knowledge about this important cytoskeletal protein and describe its many functions across a range of health conditions and pathologies. We provide perspectives for future development of Flightless I as a potential target for clinical translation and insights into potential therapeutic approaches to manipulate Flightless I functions.
- Published
- 2020
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23. The Actin-Binding Protein Cortactin Promotes Sepsis Severity by Supporting Excessive Neutrophil Infiltration into the Lung
- Author
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Nathaniel L. Lartey, Hilda Vargas-Robles, Idaira M. Guerrero-Fonseca, Alexander García-Ponce, Citlaltepetl Salinas-Lara, Klemens Rottner, and Michael Schnoor
- Subjects
sepsis ,acute lung injury ,cytokine storm ,actin-binding protein ,cortactin ,neutrophil diapedesis ,Biology (General) ,QH301-705.5 - Abstract
Sepsis is a systemic infection that can lead to multi-organ failure. It is characterised by an uncontrolled immune response with massive neutrophil influx into peripheral organs. Neutrophil extravasation into tissues depends on actin remodeling and actin-binding proteins such as cortactin, which is expressed ubiquitously, except for neutrophils. Endothelial cortactin is necessary for proper regulation of neutrophil transendothelial migration and recruitment to sites of infection. We therefore hypothesised that cortactin plays a crucial role in sepsis development by regulating neutrophil trafficking. Using a murine model of sepsis induced by cecal ligation and puncture (CLP), we showed that cortactin-deficient (KO) mice survive better due to reduced lung injury. Histopathological analysis of lungs from septic KO mice revealed absence of oedema, reduced vascular congestion and mucus deposition, and better-preserved alveoli compared to septic wild-type (WT) mice. Additionally, sepsis-induced cytokine storm, excessive neutrophil infiltration into the lung and oxidative stress were significantly reduced in KO mice. Neutrophil depletion 12 h after sepsis improved survival in WT mice by averting lung injury, similar to both neutrophil-depleted and non-depleted KO mice. Our findings highlight a critical role of cortactin for lung neutrophil infiltration and sepsis severity.
- Published
- 2022
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24. Emerging roles of TRIO and F-actin-binding protein in human diseases
- Author
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Sungjin Park, Hyunji Lee, Minhee Kim, Jisoo Park, Seon-Hwan Kim, and Jongsun Park
- Subjects
TRIOBP ,Hearing loss ,Cancer ,Actin-binding protein ,Actin cytoskeletal organization ,Tara ,Medicine ,Cytology ,QH573-671 - Abstract
Abstract TRIO and F-actin-binding protein (TRIOBP) also referred to as Tara, was originally isolated as a cytoskeleton remodeling protein. TRIOBP-1 is important for regulating F-actin filament reorganization. TRIOBP variants are broadly classified as variant-1 or − 4 and do not share exons. TRIOBP variant-5 contains all exons. Earlier studies indicated that TRIOBP-4/5 mutation is a pivotal element of autosomal recessive nonsyndromic hearing loss. However, recent studies provide clues that TRIOBP variants are associated with other human diseases including cancer and brain diseases. In this review, recent functional studies focusing on TRIOBP variants and its possible disease models are described.
- Published
- 2018
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25. Juxtanuclear Drebrin-Enriched Zone
- Author
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Ludwig-Peitsch, Wiebke K., COHEN, IRUN R., Series editor, LAJTHA, ABEL, Series editor, LAMBRIS, JOHN D., Series editor, PAOLETTI, RODOLFO, Series editor, REZAEI, NIMA, Series editor, Shirao, Tomoaki, editor, and Sekino, Yuko, editor
- Published
- 2017
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26. Drebrin in Renal Glomeruli
- Author
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Ludwig-Peitsch, Wiebke K., COHEN, IRUN R., Series editor, LAJTHA, ABEL, Series editor, LAMBRIS, JOHN D., Series editor, PAOLETTI, RODOLFO, Series editor, REZAEI, NIMA, Series editor, Shirao, Tomoaki, editor, and Sekino, Yuko, editor
- Published
- 2017
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27. An Update on the Role of the Actin Cytoskeleton in Plasmodesmata: A Focus on Formins.
- Author
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Diao, Min and Huang, Shanjin
- Subjects
PLASMODESMATA ,FORMINS ,CYTOSKELETON ,PLANT growth ,PLANT development ,PERMEABILITY - Abstract
Cell-to-cell communication in plants is mediated by plasmodesmata (PD) whose permeability is tightly regulated during plant growth and development. The actin cytoskeleton has been implicated in regulating the permeability of PD, but the underlying mechanism remains largely unknown. Recent characterization of PD-localized formin proteins has shed light on the role and mechanism of action of actin in regulating PD-mediated intercellular trafficking. In this mini-review article, we will describe the progress in this area. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
28. Association of mRNA Expression Levels of LRP1 and Actin-Binding Proteins with the Development of Laryngeal and Laryngopharyngeal Squamous Cell Carcinoma.
- Author
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Kakurina, G. V., Kolegova, Е. S., Shashova, Е. Е., Velikaya, V. V., Startseva, Zh. А., Cheremisina, О. V., Kondakova, I. V., and Choinzonov, Е. L.
- Subjects
- *
SQUAMOUS cell carcinoma , *MESSENGER RNA , *PROFILIN , *TUMOR classification - Abstract
We analyzed the association of the level of mRNA expression of the main endocytosis receptor LRP1 and actin-binding proteins (ezrin, profilin-1, cofilin-1, and adenylyl cyclase-associated protein 1) with the development and metastasis of laryngeal and laryngopharyngeal squamous cell carcinoma. The mRNA expression was evaluated in paired tissue samples using quantitative reverse transcription real-time PCR (RT-qPCR) and SYBR Green reagents. The study included 38 patients with stage T1-4N0-1M0 laryngeal and laryngopharyngeal squamous cell carcinoma and 10 patients with chronic hyperplastic laryngitis or grade II-III epithelial dysplasia. The expression of LRP1 in patients with laryngeal and laryngopharyngeal squamous cell carcinoma depended on the stage of the tumor process. Against the background of low expression of LRP1 mRNA, the relationship between cofilin 1 and profilin 1 expression became stronger (r=0.08; p=0.05) and a correlation between cofilin 1 and esrin expression (r=0.7; p=0.05) appeared. Studies on a larger patient cohort are required to make a definite conclusion on the role of LRP1 in the development of laryngeal and laryngopharyngeal squamous cell carcinoma. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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29. Towards a structural understanding of the remodeling of the actin cytoskeleton.
- Author
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Merino, Felipe, Pospich, Sabrina, and Raunser, Stefan
- Subjects
- *
ELECTRON cryomicroscopy , *MICROFILAMENT proteins , *CELL anatomy , *EUKARYOTIC cells , *MOLECULAR motor proteins - Abstract
Actin filaments (F-actin) are a key component of eukaryotic cells. Whether serving as a scaffold for myosin or using their polymerization to push onto cellular components, their function is always related to force generation. To control and fine-tune force production, cells have a large array of actin-binding proteins (ABPs) dedicated to control every aspect of actin polymerization, filament localization, and their overall mechanical properties. Although great advances have been made in our biochemical understanding of the remodeling of the actin cytoskeleton, the structural basis of this process is still being deciphered. In this review, we summarize our current understanding of this process. We outline how ABPs control the nucleation and disassembly, and how these processes are affected by the nucleotide state of the filaments. In addition, we highlight recent advances in the understanding of actomyosin force generation, and describe recent advances brought forward by the developments of electron cryomicroscopy. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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30. Nuclear actin dynamics in gene expression and genome organization.
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Kyheröinen, Salla and Vartiainen, Maria K.
- Subjects
- *
GENE expression , *GENETIC regulation , *LIVING polymerization , *TRANSCRIPTION factors , *DNA damage , *ACTIN - Abstract
Although best known from its functions in the cytoplasm, actin also localizes to the cell nucleus, where it has been linked to many essential functions from regulation of gene expression to maintenance of genomic integrity. While majority of cytoplasmic functions of actin depend on controlled actin polymerization, in the nucleus both actin monomers and filaments have their own specific roles. Actin monomers are core components of several chromatin remodeling and modifying complexes and can also regulate the activity of specific transcription factors, while actin filaments have been linked to DNA damage response and cell cycle progression. Consequently the balance between monomeric and filamentous actin must be precise controlled also in the nucleus, since their effects are dynamically coupled. In this review, we discuss the recent data on how actin dynamics is regulated within the nucleus and how this influences the different nuclear processes dependent on actin. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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- View/download PDF
31. MicroScale Thermophoresis (MST) for studying actin polymerization kinetics
- Author
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Andrea Topf, Peter Franz, and Georgios Tsiavaliaris
- Subjects
microscale thermophoresis ,actin ,polymerization ,actin-binding protein ,kinetics ,Biology (General) ,QH301-705.5 - Abstract
Here, we present a MicroScale Thermophoresis (MST)–based assay for in vitro assessment of actin polymerization. By monitoring the thermophoretic behavior of ATTO488-labeled actin in a temperature gradient over time, we could follow polymerization in real time and resolve its three characteristic phases: nucleation, elongation, and steady-state equilibration. Titration experiments allowed us to evaluate the effects of actin-binding proteins (ABPs) on polymerization, including DNase I-induced inhibition and mDia2FH1FH2 (mDia2)-assisted acceleration of nucleation. The corresponding rates of actin filament elongation were quantitatively determined, yielding values in good agreement with those obtained using the pyrene-actin polymerization assay. Finally, we measured the effect of myosin on actin polymerization, circumventing the problems of fluorescence quenching and signal disturbance that occur with other techniques. MST is a simple and valuable research tool for investigating actin kinetics covering a wide range of molecular interactions, with low protein consumption.
- Published
- 2017
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32. Region-specific effects of copulation on dendritic spine morphology and gene expression related to spinogenesis in the medial preoptic nucleus of male rats.
- Author
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Nakashima, Shizuka, Morishita, Masahiro, Ueno, Kanna, and Tsukahara, Shinji
- Subjects
- *
DENDRITIC spines , *SEXUAL intercourse , *MICROFILAMENT proteins , *GENE expression , *SEXUAL excitement - Abstract
• The MPNc is suggested to be involved in sexual arousal induction. • Copulatory experience decreases spine density in the MPNc. • Copulatory experience reduces the mRNA level of actin-binding proteins in the MPNc. • Synaptic change in the MPNc may be related to the mechanism for sexual arousal. The medial preoptic nucleus (MPN) plays an essential role in the control of male sexual behavior. In rats, the central part of the MPN (MPNc) contains a sexually dimorphic nucleus exhibiting male-biased morphological sex differences. Although it has been suggested that the MPNc of male rats functions to induce sexual arousal, the mechanisms by which male rats are sexually aroused to successfully achieve copulation are poorly understood. We recently showed that increased neuronal activity in the MPNc of male rats during copulation is higher at their first copulation compared with later copulations, indicating that a plastic change in excitatory synaptic transmission occurs with copulatory experience. In this study, we tested the hypothesis that changes to dendritic spines at structural and molecular levels occur following copulatory experience. First, we examined the effects of at least two copulations on the morphology of dendrites and spines in the MPNc and in the lateral and medial parts of the MPN (MPNlm) of male rats. In the MPNc, the total number of dendrites and their branches, and the surface area of dendrites were not significantly affected by copulation. However, the copulatory experience, specifically experience of ejaculation, significantly reduced the density of mushroom spines but not of filopodia, thin or stubby spines in the MPNc. In the MPNlm, the copulatory experience, specifically experience of ejaculation, significantly increased the surface area of dendrites, although there was no significant effect of copulation on spine density. Next, we measured the mRNA levels of genes encoding actin-binding proteins related to spinogenesis after male rats had copulated for their first and second times. Copulatory stimuli, especially stimuli from ejaculation, significantly reduced the mRNA levels of drebrin A and spinophilin in the MPNc but not in the MPNlm. These results indicate that copulatory experiences, especially experience of ejaculation, reduce spine density in the MPNc of male rats, which may result, in part, from downregulation of genes encoding actin-binding proteins. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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- View/download PDF
33. Genetically encoded orientation probes for F-actin for fluorescence polarization microscopy.
- Author
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Nakai, Nori, Sato, Keisuke, Tani, Tomomi, Saito, Kenta, Sato, Fumiya, and Terada, Sumio
- Subjects
- *
POLARIZATION microscopy , *FLUORESCENCE microscopy , *GREEN fluorescent protein , *CYTOSKELETAL proteins , *F-actin , *MICROFILAMENT proteins , *MOLECULAR orientation - Abstract
Fluorescence polarization microscopy, which can visualize both position and orientation of fluorescent molecules, is useful for analyzing architectural dynamics of proteins in vivo , especially that of cytoskeletal proteins such as actin. Fluorescent phalloidin conjugates and SiR-actin can be used as F-actin orientation probes for fluorescence polarization microscopy, but a lack of appropriate methods for their introduction to living specimens especially to tissues, embryos, and whole animals hampers their applications to image the orientation of F-actin. To solve this problem, we have developed genetically encoded F-actin orientation probes for fluorescence polarization microscopy. We rigidly connected circular permutated green fluorescent protein (GFP) to the N-terminal α-helix of actin-binding protein Lifeact or utrophin calponin homology domain (UtrCH), and normal mEGFP to the C-terminal α-helix of UtrCH. After evaluation of ensemble and single particle fluorescence polarization with the instantaneous FluoPolScope, one of the constructs turned out to be suitable for practical usage in live cell imaging. Our new, genetically encoded F-actin orientation probe, which has a similar property of an F-actin probe to conventional GFP-UtrCH, is expected to report the 3D architecture of the actin cytoskeleton with fluorescence polarization microscopy, paving the way for both the single molecular orientation imaging in cultured cells and the sub-optical resolution architectural analysis of F-actin networks analysis of F-actin in various living systems. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
34. Actin assembly states in Dictyostelium discoideum at different stages of development and during cellular stress.
- Author
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ISHIKAWA-ANKERHOLD, HELLEN C. and MÜLLER-TAUBENBERGER, ANNETTE
- Subjects
DICTYOSTELIUM discoideum ,ACTIN ,CYTOSKELETON ,CELL anatomy ,PROTEOMICS ,PHAGOCYTOSIS - Abstract
The actin cytoskeleton of non-muscle cells is essential for cellular structure and subcellular organization, and the dynamic regulation of actin assembly and disassembly is a prerequisite for motility. Pioneering work using Dictyostelium discoideum focused on the biochemical analysis of non-muscle actin, the identification of actin-regulating proteins and their specific functions during processes like cell migration, cytokinesis, phagocytosis, and morphogenesis. Although subsequent work in higher eukaryotes revealed that the processes regulating actin dynamics are often much more complex, results obtained by using Dictyostelium have been of fundamental importance because they have contributed significantly to our understanding of the actin cytoskeleton in higher eukaryotes. Dictyostelium is an accepted model system for studying fast moving cells, because the single cells of the organism share many similarities with cells of the immune system such as human neutrophils. Here we provide a brief overview on the milestones of research of the actin cytoskeleton taking advantage of Dictyostelium. Furthermore, we summarize how actin structures and cytoskeletal dynamics at different stages of development have been visualized, and give an overview on the current focus of research. In addition, we discuss results showing actin assembly states during phases of cellular stress and how stress-induced actin assembly states may contribute to our understanding of certain diseases. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
35. Emergence and maintenance of variable-length actin filaments in a limiting pool of building blocks
- Author
-
Shiladitya Banerjee and Deb Sankar Banerjee
- Subjects
biology ,Chemistry ,Microfilament Proteins ,Nucleation ,Biophysics ,macromolecular substances ,Articles ,Actins ,Protein filament ,Actin Cytoskeleton ,Eukaryotic Cells ,Formins ,biology.protein ,Actin-binding protein ,Growth rate ,Cell adhesion ,Cytoskeleton ,Actin - Abstract
Actin is one of the key structural components of the eukaryotic cytoskeleton that regulates cellular architecture and mechanical properties. Dynamic regulation of actin filament length and organization is essential for the control of many physiological processes including cell adhesion, motility and division. While previous studies have mostly focused on the mechanisms controlling the mean length of individual actin filaments, it remains poorly understood how distinct actin filament populations in cells maintain different lengths using the same set of molecular building blocks. Here we develop a theoretical model for the length regulation of multiple actin filaments by nucleation and growth rate modulation by actin binding proteins in a limiting pool of monomers. We first show that spontaneous nucleation of actin filaments naturally leads to heterogeneities in filament length distribution. We then investigate the effects of filament growth inhibition by capping proteins and growth promotion by formin proteins on filament length distribution. We find that filament length heterogeneity can be increased by growth inhibition, whereas growth promoters do not significantly affect length heterogeneity. Interestingly, a competition between filament growth inhibitors and growth promoters can give rise to bimodal filament length distribution as well as a highly heterogeneous length distribution with large statistical dispersion. We quantitatively predict how heterogeneity in actin filament length can be modulated by tuning F-actin nucleation and growth rates in order to create distinct filament subpopulations with different lengths.SIGNIFICANCEActin filaments organize into different functional network architectures within eukaryotic cells. To maintain distinct actin network architectures, it is essential to regulate the lengths of actin filaments. While the mechanisms controlling the lengths of individual actin filaments have been extensively studied, the regulation of length heterogeneity in actin filament populations is not well understood. Here we show that the modulation of actin filament growth and nucleation rates by actin binding proteins can regulate actin length distribution and create distinct sub-populations with different lengths. In particular, by tuning concentrations of formin, profilin and capping proteins, various aspects of actin filament length distribution can be controlled. Insights gained from our results may have significant implications for the regulation of actin filament length heterogeneity and architecture within a cell.
- Published
- 2022
- Full Text
- View/download PDF
36. Modulation of membrane–cytoskeleton interactions: ezrin as key player
- Author
-
Lei-Miao Yin and Michael Schnoor
- Subjects
genetic structures ,biology ,Microfilament Proteins ,Druggability ,macromolecular substances ,Cell Biology ,environment and public health ,Actins ,Cell biology ,Actin Cytoskeleton ,Cytoskeletal Proteins ,Ezrin ,Membrane ,Cell polarity ,biology.protein ,Humans ,Actin-binding protein ,Lamellipodium ,Cytoskeleton ,Actin - Abstract
Membrane-cytoskeleton interactions (MCIs) are mediated by actin-binding proteins (ABPs). Ezrin is a crucial ABP that links membranes to actin filaments during lamellipodia formation, cell polarization, and migration. We discuss the concept of MCI and the potential of ezrin as a druggable target for treating inflammatory diseases and cancers.
- Published
- 2022
- Full Text
- View/download PDF
37. The Plant Cytoskeleton Remodelling in Nematode Induced Feeding Sites
- Author
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de Almeida Engler, Janice, Favery, Bruno, Jones, John, editor, Gheysen, Godelieve, editor, and Fenoll, Carmen, editor
- Published
- 2011
- Full Text
- View/download PDF
38. Prevention of Cell Growth by Suppression of Villin Expression in Lithocholic Acid-Stimulated HepG2 Cells.
- Author
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Ozeki, Munetaka, Aini, Wulamujiang, Miyagawa-Hayashino, Aya, and Tamaki, Keiji
- Subjects
CELL growth ,GENE expression ,LITHOCHOLIC acid ,LIVER injuries ,MICROFILAMENT proteins - Abstract
Summary: Cholestasis is a condition wherein bile flow is interrupted and lithocholic acid is known to play a key role in causing severe liver injury. In this study, we performed in-depth analysis of the morphological changes in bile canaliculi and the biological role of villin in cholestasis using lithocholic acid-stimulated HepG2 human hepatocarcinoma cells. We confirmed disruption of the bile canaliculi in liver sections from a liver allograft patient with cholestasis. Lithocholic acid caused strong cytotoxicity in HepG2 cells, which was associated with abnormal morphology. Lithocholic acid reduced villin expression, which recovered in the presence of nuclear receptor agonists. Furthermore, villin mRNA expression increased following small interfering RNA (siRNA)-mediated knockdown of the nuclear farnesoid X receptor and pregnane X receptor. Villin knockdown using siRNA caused cell growth arrest in HepG2 cells. The effect of villin-knockdown on whole-genome expression in HepG2 cells was analyzed by DNA microarray. Our data suggest that lithocholic acid caused cell growth arrest by suppressing villin expression via farnesoid X receptor and pregnane X receptor in HepG2 cells. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
39. Transgelin‐2 in immunity: Its implication in cell therapy.
- Author
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Jo, Suin, Kim, Hye‐Ran, Mun, YeVin, and Jun, Chang‐Duk
- Subjects
MICROFILAMENT proteins ,CELLULAR immunity ,B cells ,IMMUNOTHERAPY ,SYNAPSES ,MACROPHAGES - Abstract
Transgelin‐2 is a small 22‐kDa actin‐binding protein implicated in actin dynamics, which stabilizes actin structures and participates in actin‐associated signaling pathways. Much curiosity regarding transgelin‐2 has centered around its dysregulation in tumor development and associated diseases. However, recent studies have shed new light on the functions of transgelin‐2, the only transgelin family member present in leukocytes, in the context of various immune responses. In this review, we outlined the biochemical properties of transgelin‐2 and its physiological functions in T cells, B cells, and macrophages. Transgelin‐2 regulates T cell activation by stabilizing the actin cytoskeleton at the immunological synapse. Transgelin‐2 in B cells also participates in the stabilization of T cell–B cell conjugates. While transgelin‐2 is expressed at trace levels in macrophages, its expression is highly upregulated upon lipopolysaccharide stimulation and plays an essential role in macrophage phagocytosis. Since transgelin‐2 increases T cell adhesion to target cells via boosting the "inside‐out" costimulatory activation of leukocyte function‐associated antigen 1, transgelin‐2 could be a suitable candidate to potentiate the antitumor response of cytotoxic T cells by compensating for the lack of costimulation in tumor microenvironment. We discussed the feasibility of using native or engineered transgelin‐2 as a synergistic molecule in cell‐based immunotherapies, without inducing off‐target disturbance in actin dynamics in other cells. Transgelin‐2, the only transgelin family member present in leukocytes, stabilizes actin structures and actively involves in the context of various immune responses. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
40. The actin bundling activity of actin bundling protein 34 is inhibited by calcium binding to the EF2.
- Author
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Chung, Jeong Min, Kim, Han-ul, Kim, Gwang Joong, Jeoung, Dooil, and Jung, Hyun Suk
- Subjects
- *
ACTIN , *DICTYOSTELIUM discoideum , *NEURODEGENERATION , *ALZHEIMER'S disease , *HUNTINGTON disease - Abstract
Actin bundling protein 34 (ABP34) is the one of 11 actin-crosslinking proteins identified in Dictyostelium discoideum , a novel model organism for the study of actin-associated neurodegenerative disorders such as Alzheimer's disease and Huntington's disease. ABP34 localizes at the leading and trailing edges of locomotory cells, i.e., at the cell cortex, filopodia, and pseudopodia. Functionally, it serves to stabilize membrane-associated actin at sites of cell–cell contact. In addition, this small crosslinking protein is involved in actin bundle formation, and its bundling activity is regulated by the concentration of calcium ion. Several studies have sought to determine the mechanism underlying the calcium-regulated actin bundling activity of ABP34, but it remains unclear. Using several mutational and structural analyses, we revealed that calcium binding to the EF2 motif disrupts the inter-domain interaction between the N- and C-domains, thereby inhibiting the actin bundling activity of ABP34. This finding provides clues about the pathogenesis of neurodegenerative disorders related to actin bundling. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
41. Functions of nuclear actin‑binding proteins in human cancer (Review).
- Author
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Yang, Xinyi and Lin, Ying
- Subjects
- *
MICROFILAMENT proteins , *CANCER genetics , *NUCLEOCYTOPLASMIC interactions , *CANCER invasiveness , *GENETIC transcription , *DNA damage - Abstract
Nuclear actin‑binding proteins (ABPs) perform distinguishable functions compared with their cytoplasmic counterparts in extensive activities of living cells. In addition to the ability to regulate actin cytoskeleton dynamics, nuclear ABPs are associated with multiple nuclear biological processes, including chromatin remodeling, gene transcriptional regulation, DNA damage response, nucleocytoplasmic trafficking and nuclear structure maintenance. The nuclear translocation of ABPs is affected by numerous intracellular or extracellular stimuli, which may lead to developmental malformation, tumor initiation, tumor progression and metastasis. Abnormal expression of certain ABPs have been reported in different types of cancer. This review focuses on the newly identified roles of nuclear ABPs in the pathological processes associated with cancer. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
42. Microscopic Temperature Control Reveals Cooperative Regulation of Actin–Myosin Interaction by Drebrin E
- Author
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Shin'ichi Ishiwata, Kotaro Oyama, Hiroyuki Ogawa, Makito Miyazaki, Madoka Suzuki, Yuki Kawamura, Shuya Ishii, and Hiroaki Kubota
- Subjects
heat pulse ,Motility ,Bioengineering ,actin-binding protein ,macromolecular substances ,Myosins ,nanofilament regulation ,Protein filament ,temperature imaging ,Myosin ,motility assay ,Molecular motor ,Animals ,General Materials Science ,Actin-binding protein ,Cytoskeleton ,Actin ,biology ,Chemistry ,Mechanical Engineering ,Neuropeptides ,Temperature ,cytoskeleton ,General Chemistry ,Condensed Matter Physics ,Actins ,molecular motor ,biology.protein ,Biophysics ,Intracellular - Abstract
Drebrin E is a regulatory protein of intracellular force produced by actomyosin complexes, that is, myosin molecular motors interacting with actin filaments. The expression level of drebrin E in nerve cells decreases as the animal grows, suggesting its pivotal but unclarified role in neuronal development. Here, by applying the microscopic heat pulse method to actomyosin motility assay, the regulatory mechanism is examined from the room temperature up to 37 °C without a thermal denaturing of proteins. We show that the inhibition of actomyosin motility by drebrin E is eliminated immediately and reversibly during heating and depends on drebrin E concentration. The direct observation of quantum dot-labeled drebrin E implies its stable binding to actin filaments during the heat-induced sliding. Our results suggest that drebrin E allosterically modifies the actin filament structure to regulate cooperatively the actomyosin activity at the maintained in vivo body temperature., 胎児の神経を形作る仕組みは精密な温度センサー --母体の体温維持が神経の成熟に重要であることを示唆--. 京都大学プレスリリース. 2021-11-10.
- Published
- 2021
43. Analysis of Nuclear-Cytoplasmic Redistribution of Actin-Binding Protein Alpha-Actinin-4 and Signaling Protein RhoA in the Process of Replicative Senescence of Human Epicardial Adipose Tissue-Derived ADH-MSC Cell Line
- Author
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D. E. Bobkov, D. F. Goncharova, A. S. Musorina, A. V. Polyanskaya, and G. G. Poljanskaya
- Subjects
Alpha-Actinin-4 ,RHOA ,Actin cytoskeleton reorganization ,Cell ,macromolecular substances ,Cell Biology ,Biology ,Actin cytoskeleton ,Cell biology ,medicine.anatomical_structure ,Cytoplasm ,Cell culture ,medicine ,biology.protein ,Actin-binding protein - Abstract
In this work, a molecular analysis of some mechanisms of the actin cytoskeleton reorganization in the process of long-term cultivation of human mesenchymal stem cells was carried out. The distribution of actin-binding protein α-actinin-4 and small GTPase RhoA in mesenchymal stem cells of the ADH-MSC line isolated from adipose tissue of an adult human was studied using immunofluorescence methods and analysis of confocal images. It was found that in the process of replicative senescence during passages 8–17 in ADH-MSC cells, the redistribution of the studied proteins from the cytoplasm to the cell nuclei occurs, which is accompanied by changes in the organization of the actin cytoskeleton. To assess the organization of the actin cytoskeleton, we used the coefficient of local connected fractal dimension (LCFD), which characterizes local disturbances in the geometry of heterogeneous geometric objects and is an indirect measure for assessing the structural integrity of such a complex geometric object as the actin cytoskeleton of spread cells. By measuring the LCFD of confocal images of cells stained with rhodamine phalloidin, changes in the structural integrity of the actin cytoskeleton during replicative senescence were quantified. It was found that from passages 8 to 11, a partial reversible disassembly of the actin cytoskeleton occurs, followed by assembly by the passage 17.
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- 2021
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44. Alpha-actinin of the chlorarchiniophyte Bigelowiella natans
- Author
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Lars Backman
- Subjects
Spectrin repeat ,Actin-binding protein ,Bigelowiella natans ,Alpha-actinin ,Calcium-binding protein ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
The genome of the chlorarchiniophyte Bigelowiella natans codes for a protein annotated as an α-actinin-like protein. Analysis of the primary sequence indicate that this protein has the same domain structure as other α-actinins, a N-terminal actin-binding domain and a C-terminal calmodulin-like domain. These two domains are connected by a short rod domain, albeit long enough to form a single spectrin repeat. To analyse the functional properties of this protein, the full-length protein as well as the separate domains were cloned and isolated. Characerisation showed that the protein is capable of cross-linking actin filaments into dense bundles, probably due to dimer formation. Similar to human α-actinin, calcium-binding occurs to the most N-terminal EF-hand motif in the calmodulin-like C-terminal domain. The results indicate that this Bigelowiella protein is a proper α-actinin, with all common characteristics of a typical α-actinin.
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- 2018
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45. Caspase-Mediated Cleavage of Human Cortactin during Influenza A Virus Infection Occurs in Its Actin-Binding Domains and Is Associated with Released Virus Titres
- Author
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Da-Yuan Chen and Matloob Husain
- Subjects
influenza a virus ,cortactin ,actin-binding protein ,actin-binding repeats ,caspase ,cathepsin ,Microbiology ,QR1-502 - Abstract
Influenza A virus (IAV) exploits host factors to multiply and cause disease. An in-depth knowledge of this interaction of IAV with the host will aid the development of anti-IAV intervention strategies. Previously, we demonstrated that host cortactin, an actin filament-binding protein promotes IAV infection, but undergoes degradation via a lysosome-associated apoptotic pathway during the late stages of IAV infection. Next, we wanted to further understand the mechanisms and significance of this phenomenon. By using the RNA interference screens and site-directed mutagenesis followed by western blotting, we found that lysosome protease, cathepsin C is involved in cortactin degradation in human cells infected with IAV. Furthermore, executioner apoptotic caspase, caspase-3 not caspase-6 or caspase-7 is involved in cortactin degradation during IAV infection, and caspase-3 cleavage site is located in the first actin-binding repeat of cortactin polypeptide. Finally, when expressed ectopically, the cleavage-resistant cortactin mutants decreased the amount of IAV progeny released from infected cells that was enhanced by the cleavage-sensitive cortactin wild type. These data strengthen the hypothesis proposed earlier that host cortactin plays an inhibitory role during the late stages of IAV infection, and IAV is facilitating its degradation to undermine such function.
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- 2020
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46. Relationship Estimation of Cell Mobility Proteins Level with Processes of Proteolysis and Lymphogenic Metastasis in Breast Cancer
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E. A. Sidenko, D. A. Korshunov, E. E. Sereda, I. V. Kondakova, G. V. Kakurina, and E. S. Kolegova
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biology ,Biophysics ,Calpain ,Cell migration ,General Chemistry ,General Medicine ,Actin cytoskeleton ,medicine.disease ,Biochemistry ,Metastasis ,Cell biology ,Proteasome ,Tumor progression ,biology.protein ,medicine ,Actin-binding protein ,Intracellular - Abstract
The biological aggressiveness of a tumor is determined by the ability of tumor cells to invade and metastasize which is a consequence of their acquisition of a number of phenotypic characteristics. Remodeling of the actin cytoskeleton occurs during cell migration which is carried out by various groups of actin binding proteins in the regulation of which proteasomes and calpains play an important role. Therefore the study of the relationship of proteins associated with cell motility with the processes of lymphogenous metastasis as well as the assessment of the regulatory role of intracellular proteases in these processes is extremely important for fundamental oncology. This study demonstrates the associations of actin-binding proteins with the activity of proteasomes and calpain, which are specific for tumors and metastases of the mammary gland. We proposed a possible scheme of the relationship of intracellular systems with the actin-binding proteins. The results obtained expand the fundamental understanding of the processes of tumor progression and can also be used in the search for proteins-targets for therapeutic action in molecular targeted cancer therapy.
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- 2021
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47. Drebrin, an actin‐binding protein, is required for lens morphogenesis and growth
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Shruthi Karnam, Ponugoti Vasantha Rao, Rupalatha Maddala, and Jonathan A. Stiber
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0301 basic medicine ,Cell Communication ,Biology ,Article ,Actin cytoskeleton organization ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Downregulation and upregulation ,Lens, Crystalline ,Conditional gene knockout ,Morphogenesis ,medicine ,Animals ,Actin-binding protein ,Cytoskeleton ,Actin ,Microfilament Proteins ,Actins ,Cell biology ,030104 developmental biology ,medicine.anatomical_structure ,Fiber cell ,Lens (anatomy) ,biology.protein ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
Background Lens morphogenesis, architecture, and clarity are known to be critically dependent on actin cytoskeleton organization and cell adhesive interactions. There is limited knowledge, however regarding the identity and role of key proteins regulating actin cytoskeletal organization in the lens. This study investigated the role of drebrin, a developmentally regulated actin-binding protein, in mouse lens development by generating and characterizing a conditional knockout (cKO) mouse model using the Cre-LoxP recombination approach. Results Drebrin E, a splice variant of DBN1 is a predominant isoform expressed in the mouse lens and exhibits a maturation-dependent downregulation. Drebrin co-distributes with actin in both epithelium and fibers. Conditional deficiency (both haploinsufficiency and complete absence) of drebrin results in disrupted lens morphogenesis leading to cataract and microphthalmia. The drebrin cKO lens reveals a dramatic decrease in epithelial height and width, E-cadherin, and proliferation, and increased apoptotic cell death and expression of α-smooth muscle actin, together with severely impaired fiber cell organization, polarity, and cell-cell adhesion. Conclusions This study demonstrates the requirement of drebrin in lens development and growth, with drebrin deficiency leading to impaired lens morphogenesis and microphthalmia. This article is protected by copyright. All rights reserved.
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- 2021
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48. Phosphorylation of the WH2 domain in yeast Las17/WASP regulates G-actin binding and protein function during endocytosis
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I. I. Smaczynska-de Rooij, Ellen G. Allwood, J. S. Palmer, Kathryn R. Ayscough, Joe J. Tyler, L. Abugharsa, and L. P. Hancock
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Cell biology ,Saccharomyces cerevisiae Proteins ,Science ,Saccharomyces cerevisiae ,macromolecular substances ,Endocytosis ,medicine.disease_cause ,Biochemistry ,Article ,Polymerization ,Protein Domains ,medicine ,Amino Acid Sequence ,Actin-binding protein ,Phosphorylation ,Actin ,Actin nucleation ,Mutation ,Multidisciplinary ,Sequence Homology, Amino Acid ,biology ,Chemistry ,Actin monomer binding ,Actins ,biology.protein ,Medicine ,Sequence motif ,Wiskott-Aldrich Syndrome Protein ,Protein Binding - Abstract
Actin nucleation is the key rate limiting step in the process of actin polymerization, and tight regulation of this process is critical to ensure actin filaments form only at specific times and at defined regions of the cell. WH2 domains are short sequence motifs found in many different actin binding proteins including WASP family proteins which regulate the actin nucleating complex Arp2/3. In this study we reveal a phosphorylation site, Serine 554, within the WH2 domain of the yeast WASP homologue Las17. Both phosphorylation and a phospho-mimetic mutation reduce actin monomer binding affinity while an alanine mutation, generated to mimic the non-phosphorylated state, increases actin binding affinity. The effect of these mutations on the Las17-dependent process of endocytosis in vivo was analysed and leads us to propose that switching of Las17 phosphorylation states may allow progression through distinct phases of endocytosis from site assembly through to the final scission stage. While the study is focused on Las17, the sole WASP family protein in yeast, our results have broad implications for our understanding of how a key residue in this conserved motif can underpin the many different actin regulatory roles with which WH2 domains have been associated.
- Published
- 2021
49. The actin‐binding protein Adseverin mediates neutrophil polarization and migration
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Yongqiang Wang, Michael Glogauer, Chunxiang Sun, and Judah Glogauer
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Innate immune system ,Neutrophils ,Microfilament Proteins ,Regulator ,Context (language use) ,Chemotaxis ,macromolecular substances ,Cell Biology ,Biology ,Actins ,Cell biology ,Mice ,Structural Biology ,Knockout mouse ,biology.protein ,Animals ,Actin-binding protein ,Gelsolin ,Actin - Abstract
Through the process of chemotactic migration, neutrophils are able to recruit to an inflammatory site and eliminate pathogens, thus playing a vital role in host defense. The process of neutrophil chemotaxis is mediated by dynamic actin reorganization and polymerization. Adseverin, an actin-binding protein and member of the Gelsolin superfamily of proteins, has been hypothesized to regulate goal directed movement through the capping and severing of actin filaments, but has never been investigated in the context of neutrophil chemotaxis. Using an Adseverin knockout mouse model, we show that Adseverin plays a role in subcortical F-actin assembly at the leading edge during chemotaxis through the generation of free barbed ends on existing actin filaments. In addition, in the absence of Adseverin, neutrophils show reduced speed of migration in vitro and in vivo. This study indicates that Adseverin is a regulator of actin filament generation during neutrophil chemotaxis.
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- 2021
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50. In Vitro-Evolved Peptides Bind Monomeric Actin and Mimic Actin-Binding Protein Thymosin-β4
- Author
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Davide Bertoldo, Verena Hurst, Kai Harada, Kenji Shimada, Christian Heinis, Jonas Wilbs, Raphael J. Gübeli, Yuichiro Takahashi, Ganesh Kumar Mothukuri, Masahiko Harata, Susan M. Gasser, and Christian B. Gerhold
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0301 basic medicine ,Phage display ,biology ,010405 organic chemistry ,Chemistry ,Phalloidin ,macromolecular substances ,General Medicine ,Plasma protein binding ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,Protein structure ,biology.protein ,Molecular Medicine ,Actin-binding protein ,Binding site ,Peptide library ,Actin - Abstract
Actin is the most abundant protein in eukaryotic cells and is key to many cellular functions. The filamentous form of actin (F-actin) can be studied with help of natural products that specifically recognize it, as for example fluorophore-labeled probes of the bicyclic peptide phalloidin, but no synthetic probes exist for the monomeric form of actin (G-actin). Herein, we have panned a phage display library consisting of more than 10 billion bicyclic peptides against G-actin and isolated binders with low nanomolar affinity and greater than 1000-fold selectivity over F-actin. Sequence analysis revealed a strong similarity to a region of thymosin-β4, a protein that weakly binds G-actin, and competition binding experiments confirmed a common binding region at the cleft between actin subdomains 1 and 3. Together with F-actin-specific peptides that we also isolated, we evaluated the G-actin peptides as probes in pull-down, imaging, and competition binding experiments. While the F-actin peptides were applied successfully for capturing actin in cell lysates and for imaging, the G-actin peptides did not bind in the cellular context, most likely due to competition with thymosin-β4 or related endogenous proteins for the same binding site.
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- 2021
- Full Text
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