259 results on '"cry1"'
Search Results
2. Chronotoxici‐Plate Containing Droplet‐Engineered Rhythmic Liver Organoids for Drug Toxicity Evaluation.
- Author
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Zhou, Jiaqi, Huang, Yi‐chun, Wang, Wanlong, Li, Jiawei, Hou, Yibo, Yi, Ziqi, Yang, Haowei, Hu, Keer, Zhu, Yu, Wang, Zitian, and Ma, Shaohua
- Subjects
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TOXICITY testing , *DRUG toxicity , *ORGANOIDS , *CIRCADIAN rhythms , *LIVER , *ESSENTIAL drugs - Abstract
The circadian clock coordinates the daily rhythmicity of biological processes, and its dysregulation is associated with various human diseases. Despite the direct targeting of rhythmic genes by many prevalent and World Health Organization (WHO) essential drugs, traditional approaches can't satisfy the need of explore multi‐timepoint drug administration strategies across a wide range of drugs. Here, droplet‐engineered primary liver organoids (DPLOs) are generated with rhythmic characteristics in 4 days, and developed Chronotoxici‐plate as an in vitro high‐throughput automated rhythmic tool for chronotherapy assessment within 7 days. Cryptochrome 1 (Cry1) is identified as a rhythmic marker in DPLOs, providing insights for rapid assessment of organoid rhythmicity. Using oxaliplatin as a representative drug, time‐dependent variations are demonstrated in toxicity on the Chronotoxici‐plate, highlighting the importance of considering time‐dependent effects. Additionally, the role of chronobiology is underscored in primary organoid modeling. This study may provide tools for both precision chronotherapy and chronotoxicity in drug development by optimizing administration timing. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. Blue light photoreceptor cryptochrome 1 promotes wood formation and anthocyanin biosynthesis in Populus.
- Author
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Chen, Xiaoman, Fan, Yiting, Guo, Ying, Li, Shuyi, Zhang, Bo, Li, Hao, and Liu, Li‐Jun
- Subjects
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CRYPTOCHROMES , *ANTHOCYANINS , *BIOSYNTHESIS , *WOOD , *POPLARS , *PLANT biomass , *TREE growth - Abstract
Blue light photoreceptor cryptochrome 1 (CRY1) in herbaceous plants plays crucial roles in various developmental processes, including cotyledon expansion, hypocotyl elongation and anthocyanin biosynthesis. However, the function of CRY1 in perennial trees is unclear. In this study, we identified two ortholog genes of CRY1 (PagCRY1a and PagCRY1b) from Populus, which displayed high sequence similarity to Arabidopsis CRY1. Overexpression of PagCRY1 substantially inhibited plant growth and promoted secondary xylem development in Populus, while CRISPR/Cas9‐mediated knockout of PagCRY1 enhanced plant growth and delayed secondary xylem development. Moreover, overexpression of PagCRY1 dramatically increased anthocyanin accumulation. The further analysis supported that PagCRY1 functions specifically in response to blue light. Taken together, our results demonstrated that modulating the expression of blue light photoreceptor CRY1 ortholog gene in Populus could significantly influence plant biomass production and the process of wood formation, laying a foundation for further investigating the light‐regulated tree growth. Summary statement: Light is one of the most important environmental signals that govern plant growth and development. This study demonstrated that the blue light photoreceptor PagCRY1 substantially promotes wood formation and anthocyanin biosynthesis in Populus, and provides evidence showing that HY5 and BBX6 may act downstream of PagCRY1 to activate lignin and anthocyanin biosynthesis. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
4. Cryptochrome 1 regulates ovarian granulosa cell senescence through NCOA4-mediated ferritinophagy.
- Author
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Ma, Jing, Chen, Sixing, Liu, Jing, Liao, Yixin, Li, Lina, Wang, Chi Chiu, Song, Sishi, Feng, Rixuan, Hu, Haoyue, and Quan, Song
- Subjects
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GRANULOSA cells , *CELLULAR aging , *UBIQUITINATION , *CRYPTOCHROMES , *MOLECULAR clock , *IRON chelates - Abstract
Age-associated decreases in follicle number and oocyte quality result in a decline in female fertility, which is associated with increased infertility. Granulosa cells play a major role in oocyte development and maturation both in vivo and in vitro. However, it is unclear whether a reduction in cryptochrome 1 (Cry1) expression contributes to granulosa cell senescence, and further exploration is needed to understand the underlying mechanisms. In this study, we investigated the role of Cry1, a core component of the molecular circadian clock, in the regulation of senescence in ovarian granulosa cells. Western blotting and qRT-PCR showed that Cry1 expression was downregulated in aged human ovarian granulosa cells and was correlated with age and anti-Müllerian hormone (AMH) levels. RNA-seq analysis suggested that ferritinophagy was increased after Cry1 knockdown in KGN cells. MDA, iron, and reactive oxygen species (ROS) assays were used to detect cellular ferritinophagy levels. Ferroptosis inhibitors, iron chelators, autophagy inhibitors, and nuclear receptor coactivator 4 (NCOA4) knockdown alleviated KGN cell senescence induced by Cry1 knockdown. Immunofluorescence, immunoprecipitation, and ubiquitination assays indicated that Cry1 affected NCOA4 ubiquitination and degradation through HERC2, thereby affecting NCOA4-mediated ferritinophagy and causing granulosa cell senescence. KL201, a Cry1 stabilizer, enhanced ovarian function in naturally aged mice by reducing ferritinophagy. Our study reveals the potential mechanisms of action of Cry1 during ovarian aging and provides new insights for the clinical treatment of age-related fertility decline. A proposed molecular model of Cry1 in regulating senescence of human granulosa cells. Cry1 depletion reduced the expression of the E3 ubiquitin ligase HERC2, which reduced the ubiquitination and degradation of NCOA4, thereby promoting ferritinophagy and inducing granulosa cell senescence. [Display omitted] • Cry1 expression is downregulated in aged human ovarian granulosa cells. • Cry1 induces KGN cell senescence through NCOA4-mediated ferritinophagy. • Cry1 affects NCOA4 ubiquitination and degradation through HERC2. • Cry1 stabilizer KL201 enhances ovarian function by reducing ferritinophagy in middle-aged mice. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
5. The dual‐action mechanism of Arabidopsis cryptochromes.
- Author
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Qu, Gao‐Ping, Jiang, Bochen, and Lin, Chentao
- Subjects
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CRYPTOCHROMES , *ARABIDOPSIS , *TRANSCRIPTION factors , *BLUE light , *PROTEIN kinases , *UBIQUITIN ligases , *CHROMATIN-remodeling complexes - Abstract
Photoreceptor cryptochromes (CRYs) mediate blue‐light regulation of plant growth and development. It has been reported that Arabidopsis CRY1and CRY2 function by physically interacting with at least 84 proteins, including transcription factors or co‐factors, chromatin regulators, splicing factors, messenger RNA methyltransferases, DNA repair proteins, E3 ubiquitin ligases, protein kinases and so on. Of these 84 proteins, 47 have been reported to exhibit altered binding affinity to CRYs in response to blue light, and 41 have been shown to exhibit condensation to CRY photobodies. The blue light‐regulated composition or condensation of CRY complexes results in changes of gene expression and developmental programs. In this mini‐review, we analyzed recent studies of the photoregulatory mechanisms of Arabidopsis CRY complexes and proposed the dual mechanisms of action, including the "Lock‐and‐Key" and the "Liquid‐Liquid Phase Separation (LLPS)" mechanisms. The dual CRY action mechanisms explain, at least partially, the structural diversity of CRY‐interacting proteins and the functional diversity of the CRY photoreceptors. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
6. Bevacizumab increases the sensitivity of olaparib to homologous recombination-proficient ovarian cancer by suppressing CRY1 via PI3K/AKT pathway.
- Author
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Yasushi Iida, Nozomu Yanaihara, Yuki Yoshino, Misato Saito, Ryosuke Saito, Junya Tabata, Ayako Kawabata, Masataka Takenaka, Natsuko Chiba, and Aikou Okamoto
- Subjects
BEVACIZUMAB ,PI3K/AKT pathway ,OVARIAN cancer ,OLAPARIB ,OVARIAN epithelial cancer - Abstract
PARP inhibitors have changed the management of advanced high-grade epithelial ovarian cancer (EOC), especially homologous recombinant (HR)- deficient advanced high-grade EOC. However, the effect of PARP inhibitors on HR-proficient (HRP) EOC is limited. Thus, new therapeutic strategy for HRP EOC is desired. In recent clinical study, the combination of PARP inhibitors with antiangiogenic agents improved therapeutic efficacy, even in HRP cases. These data suggested that anti-angiogenic agents might potentiate the response to PARP inhibitors in EOC cells. Here, we demonstrated that anti-angiogenic agents, bevacizumab and cediranib, increased the sensitivity of olaparib in HRP EOC cells by suppressing HR activity. Most of the g-H2AX foci were co-localized with RAD51 foci in control cells. However, most of the RAD51 were decreased in the bevacizumab-treated cells. RNA sequencing showed that bevacizumab decreased the expression of CRY1 under DNA damage stress. CRY1 is one of the transcriptional coregulators associated with circadian rhythm and has recently been reported to regulate the expression of genes required for HR in cancer cells. We found that the anti-angiogenic agents suppressed the increase of CRY1 expression by inhibiting VEGF/VEGFR/PI3K pathway. The suppression of CRY1 expression resulted in decrease of HR activity. In addition, CRY1 inhibition also sensitized EOC cells to olaparib. These data suggested that anti-angiogenic agents and CRY1 inhibitors will be the promising candidate in the combination therapy with PARP inhibitors in HR-proficient EOC. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
7. Impact of Long-Lasting Environmental Factors on Regulation Mediated by the miR-34 Family.
- Author
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Štefánik, Peter, Morová, Martina, and Herichová, Iveta
- Subjects
ENVIRONMENTAL regulations ,GENE expression ,CIRCADIAN rhythms ,NON-coding RNA ,ELECTROMAGNETIC fields - Abstract
The present review focuses on the interactions of newly emerging environmental factors with miRNA-mediated regulation. In particular, we draw attention to the effects of phthalates, electromagnetic fields (EMFs) and a disrupted light/dark cycle. miRNAs are small non-coding RNA molecules with a tremendous regulatory impact, which is usually executed via gene expression inhibition. To address the capacity of environmental factors to influence miRNA-mediated regulation, the miR-34 family was selected for its well-described oncostatic and neuro-modulatory properties. The expression of miR-34 is in a tissue-dependent manner to some extent under the control of the circadian system. There is experimental evidence implicating that phthalates, EMFs and the circadian system interact with the miR-34 family, in both lines of its physiological functioning. The inhibition of miR-34 expression in response to phthalates, EMFs and light contamination has been described in cancer tissue and cell lines and was associated with a decline in oncostatic miR-34a signalling (decrease in p21 expression) and a promotion of tumorigenesis (increases in Noth1, cyclin D1 and cry1 expressions). The effects of miR-34 on neural functions have also been influenced by phthalates, EMFs and a disrupted light/dark cycle. Environmental factors shifted the effects of miR-34 from beneficial to the promotion of neurodegeneration and decreased cognition. Moreover, the apoptogenic capacity of miR-34 induced via phthalate administration in the testes has been shown to negatively influence germ cell proliferation. To conclude, as the oncostatic and positive neuromodulatory functions of the miR-34 family can be strongly influenced by environmental factors, their interactions should be taken into consideration in translational medicine. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
8. Chronotoxici‐Plate Containing Droplet‐Engineered Rhythmic Liver Organoids for Drug Toxicity Evaluation
- Author
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Jiaqi Zhou, Yi‐chun Huang, Wanlong Wang, Jiawei Li, Yibo Hou, Ziqi Yi, Haowei Yang, Keer Hu, Yu Zhu, Zitian Wang, and Shaohua Ma
- Subjects
chronotoxicity ,Cry1 ,droplet‐engineered liver organoid ,oxaliplatin ,Science - Abstract
Abstract The circadian clock coordinates the daily rhythmicity of biological processes, and its dysregulation is associated with various human diseases. Despite the direct targeting of rhythmic genes by many prevalent and World Health Organization (WHO) essential drugs, traditional approaches can't satisfy the need of explore multi‐timepoint drug administration strategies across a wide range of drugs. Here, droplet‐engineered primary liver organoids (DPLOs) are generated with rhythmic characteristics in 4 days, and developed Chronotoxici‐plate as an in vitro high‐throughput automated rhythmic tool for chronotherapy assessment within 7 days. Cryptochrome 1 (Cry1) is identified as a rhythmic marker in DPLOs, providing insights for rapid assessment of organoid rhythmicity. Using oxaliplatin as a representative drug, time‐dependent variations are demonstrated in toxicity on the Chronotoxici‐plate, highlighting the importance of considering time‐dependent effects. Additionally, the role of chronobiology is underscored in primary organoid modeling. This study may provide tools for both precision chronotherapy and chronotoxicity in drug development by optimizing administration timing.
- Published
- 2024
- Full Text
- View/download PDF
9. Diurnal circadian clock gene expression is altered in models of genetic and acquired epilepsy
- Author
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Glenn R. Yamakawa, Meshwa Patel, Runxuan Lin, Terence J. O'Brien, Richelle Mychasiuk, and Pablo M. Casillas‐Espinosa
- Subjects
animal model ,bmal1 ,circadian ,cry1 ,GAERS ,per1 ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Objectives Growing evidence demonstrates a relationship between epilepsy and the circadian system. However, relatively little is known about circadian function in disease states, such as epilepsy. This study aimed to characterize brain and peripheral core circadian clock gene expression in rat models of genetic and acquired epilepsy. Methods For the Genetic Absence Epilepsy Rats from Strasbourg (GAERS) study, we used 40 GAERS and 40 non‐epileptic control (NEC) rats. For the kainic acid status epilepticus (KASE) study, we used 40 KASE and 40 sham rats. Rats were housed in a 7 am:7 pm light–dark cycle. Hypothalamus, hippocampus, liver, and small intestine samples were collected every 3 h throughout the light period. We then assessed core diurnal clock gene expression of per1, cry1, clock, and bmal1. Results In the GAERS rats, all tissues exhibited significant changes in clock gene expression (P 0.05) compared with shams. Significance These results indicate marked diurnal disruption to core circadian clock gene expression in rats with both generalized and focal chronic epilepsy. This could contribute to epileptic symptomology and implicate the circadian system as a viable target for future treatments.
- Published
- 2023
- Full Text
- View/download PDF
10. Cryptochrome proteins regulate the circadian intracellular behavior and localization of PER2 in mouse suprachiasmatic nucleus neurons
- Author
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Smyllie, Nicola J, Bagnall, James, Koch, Alex A, Niranjan, Dhevahi, Polidarova, Lenka, Chesham, Johanna E, Chin, Jason W, Partch, Carrie L, Loudon, Andrew SI, and Hastings, Michael H
- Subjects
Neurosciences ,Sleep Research ,1.1 Normal biological development and functioning ,Underpinning research ,Animals ,Circadian Rhythm ,Cryptochromes ,Fluorescent Antibody Technique ,Gene Expression Regulation ,Mice ,Period Circadian Proteins ,Protein Transport ,Suprachiasmatic Nucleus Neurons ,Time-Lapse Imaging ,CRY1 ,SCN ,FRAP ,nuclear retention ,intracellular mobility - Abstract
The ∼20,000 cells of the suprachiasmatic nucleus (SCN), the master circadian clock of the mammalian brain, coordinate subordinate cellular clocks across the organism, driving adaptive daily rhythms of physiology and behavior. The canonical model for SCN timekeeping pivots around transcriptional/translational feedback loops (TTFL) whereby PERIOD (PER) and CRYPTOCHROME (CRY) clock proteins associate and translocate to the nucleus to inhibit their own expression. The fundamental individual and interactive behaviors of PER and CRY in the SCN cellular environment and the mechanisms that regulate them are poorly understood. We therefore used confocal imaging to explore the behavior of endogenous PER2 in the SCN of PER2::Venus reporter mice, transduced with viral vectors expressing various forms of CRY1 and CRY2. In contrast to nuclear localization in wild-type SCN, in the absence of CRY proteins, PER2 was predominantly cytoplasmic and more mobile, as measured by fluorescence recovery after photobleaching. Virally expressed CRY1 or CRY2 relocalized PER2 to the nucleus, initiated SCN circadian rhythms, and determined their period. We used translational switching to control CRY1 cellular abundance and found that low levels of CRY1 resulted in minimal relocalization of PER2, but yet, remarkably, were sufficient to initiate and maintain circadian rhythmicity. Importantly, the C-terminal tail was necessary for CRY1 to localize PER2 to the nucleus and to initiate SCN rhythms. In CRY1-null SCN, CRY1Δtail opposed PER2 nuclear localization and correspondingly shortened SCN period. Through manipulation of CRY proteins, we have obtained insights into the spatiotemporal behaviors of PER and CRY sitting at the heart of the TTFL molecular mechanism.
- Published
- 2022
11. The interaction between CRY1 Polymorphism and Alternative Healthy Eating Index (AHEI) on cardiovascular risk factors in overweight women and women with obesity: a cross-sectional study
- Author
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Fatemeh Dehghani Firouzabadi, Atieh Mirzababaei, Farideh Shiraseb, Hadith Tangestani, and Khadijeh Mirzaei
- Subjects
CRY1 ,Alternative healthy eating index ,Cardiovascular risk factors ,Obesity ,Overweight ,Interaction ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
Abstract Background According to some studies, diet can be interaction with CRY1 polymorphism and may be related to obesity and the risk of cardiovascular diseases (CVD). So, this study examined the interaction between CRY1 polymorphism and AHEI on cardiovascular risk factors in overweight women and women with obesity. Methods This cross-sectional study was performed on 377 Iranian women with overweight and obesity aged 18–48(BMI ≥ 25 kg/m2). Dietary intake was evaluated by the use of a food frequency questionnaire (FFQ) with 147 items. The AHEI was calculated based on previous studies. Anthropometric and biochemical measurements were assessed and the bioelectrical impedance analysis method was used for body analysis. The rs2287161 was genotyped by the restriction fragment length polymorphism (PCR-RFLP) method. Objects were divided into three groups based on rs2287161 genotypes. Results Our findings determined that the prevalence of the C allele was 51.9% and the G allele was 48.0%. The mean age and BMI were 36.6 ± 9.1years and 31 ± 4 kg/m2 respectively. After controlling for confounders (BMI, age, total energy intake, and physical activity), this study demonstrated that there was a significant interaction between CC genotype and adherence to AHEI on odds of hyper LDL (OR = 1.94, 95% CI = 1.24–3.05, P for interaction = 0.004), hypertension (OR = 1.80, 95% CI = 1.11–2.93, P for interaction = 0.01) and hyperglycemia (OR = 1.56, 95% CI = 0.98–2.47, P for interaction = 0.05). Conclusions This study indicated that adherence to AHEI can reduce the odds of hyper LDL, hypertension, and hyperglycemia in the CC genotype of rs2287161.
- Published
- 2023
- Full Text
- View/download PDF
12. Diurnal circadian clock gene expression is altered in models of genetic and acquired epilepsy.
- Author
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Yamakawa, Glenn R., Patel, Meshwa, Lin, Runxuan, O'Brien, Terence J., Mychasiuk, Richelle, and Casillas‐Espinosa, Pablo M.
- Subjects
MOLECULAR clock ,CLOCK genes ,CIRCADIAN rhythms ,GENETIC models ,GENE expression ,EPILEPSY ,HYPOTHALAMUS ,SMALL intestine - Abstract
Objectives: Growing evidence demonstrates a relationship between epilepsy and the circadian system. However, relatively little is known about circadian function in disease states, such as epilepsy. This study aimed to characterize brain and peripheral core circadian clock gene expression in rat models of genetic and acquired epilepsy. Methods: For the Genetic Absence Epilepsy Rats from Strasbourg (GAERS) study, we used 40 GAERS and 40 non‐epileptic control (NEC) rats. For the kainic acid status epilepticus (KASE) study, we used 40 KASE and 40 sham rats. Rats were housed in a 7 am:7 pm light–dark cycle. Hypothalamus, hippocampus, liver, and small intestine samples were collected every 3 h throughout the light period. We then assessed core diurnal clock gene expression of per1, cry1, clock, and bmal1. Results: In the GAERS rats, all tissues exhibited significant changes in clock gene expression (P < 0.05) when compared to NEC. In the KASE rats, there were fewer effects of the epileptic condition in the hypothalamus, hippocampus, or small intestine (P > 0.05) compared with shams. Significance: These results indicate marked diurnal disruption to core circadian clock gene expression in rats with both generalized and focal chronic epilepsy. This could contribute to epileptic symptomology and implicate the circadian system as a viable target for future treatments. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
13. The interaction between CRY1 Polymorphism and Alternative Healthy Eating Index (AHEI) on cardiovascular risk factors in overweight women and women with obesity: a cross-sectional study.
- Author
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Firouzabadi, Fatemeh Dehghani, Mirzababaei, Atieh, Shiraseb, Farideh, Tangestani, Hadith, and Mirzaei, Khadijeh
- Subjects
- *
HYPERGLYCEMIA prevention , *CARDIOVASCULAR diseases risk factors , *OBESITY , *HYPERTENSION , *CONFIDENCE intervals , *CROSS-sectional method , *FOOD consumption , *ANTHROPOMETRY , *DIET , *GENETIC polymorphisms , *ALLELES , *PHYSICAL activity , *HEALTH behavior , *QUESTIONNAIRES , *BIOELECTRIC impedance , *GENOTYPES , *DESCRIPTIVE statistics , *RESEARCH funding , *ODDS ratio , *WOMEN'S health - Abstract
Background: According to some studies, diet can be interaction with CRY1 polymorphism and may be related to obesity and the risk of cardiovascular diseases (CVD). So, this study examined the interaction between CRY1 polymorphism and AHEI on cardiovascular risk factors in overweight women and women with obesity. Methods: This cross-sectional study was performed on 377 Iranian women with overweight and obesity aged 18–48(BMI ≥ 25 kg/m2). Dietary intake was evaluated by the use of a food frequency questionnaire (FFQ) with 147 items. The AHEI was calculated based on previous studies. Anthropometric and biochemical measurements were assessed and the bioelectrical impedance analysis method was used for body analysis. The rs2287161 was genotyped by the restriction fragment length polymorphism (PCR-RFLP) method. Objects were divided into three groups based on rs2287161 genotypes. Results: Our findings determined that the prevalence of the C allele was 51.9% and the G allele was 48.0%. The mean age and BMI were 36.6 ± 9.1years and 31 ± 4 kg/m2 respectively. After controlling for confounders (BMI, age, total energy intake, and physical activity), this study demonstrated that there was a significant interaction between CC genotype and adherence to AHEI on odds of hyper LDL (OR = 1.94, 95% CI = 1.24–3.05, P for interaction = 0.004), hypertension (OR = 1.80, 95% CI = 1.11–2.93, P for interaction = 0.01) and hyperglycemia (OR = 1.56, 95% CI = 0.98–2.47, P for interaction = 0.05). Conclusions: This study indicated that adherence to AHEI can reduce the odds of hyper LDL, hypertension, and hyperglycemia in the CC genotype of rs2287161. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
14. Circadian clock regulates developmental time through ecdysone and juvenile hormones in Bombyx mori.
- Author
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Qiu, Jianfeng, Dai, Taiming, Luo, Cheng, Cui, Wenzhao, Liu, Kai, Li, Jianglan, Sima, Yanghu, and Xu, Shiqing
- Subjects
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JUVENILE hormones , *SILKWORMS , *ECDYSONE , *ANIMAL development , *HORMONE synthesis , *HOMEOSTASIS , *MOLECULAR clock - Abstract
The circadian clock plays an integral role in hormone biosynthesis and secretion. However, how the circadian clock precisely coordinates hormonal homeostasis to maintain normal animal development remains unclear. Here, we show that knocking out the core clock gene Cryptochrome 1 (Cry1) significantly delays the developmental time in Bombyx mori. This study focuses on the ecdysone and juvenile hormone signalling pathways of fifth instar larvae with the longest developmental time delay. We found that the mutant reduced prothoracicotropic hormone synthesis in the brain, and could not produce sufficient ecdysone in the prothoracic gland, resulting in a delayed peak of 20‐hydroxyecdysone titre in the hemolymph of fifth instar larvae, prolonging developmental time. Moreover, further investigation revealed that the mutant enhanced juvenile hormone biosynthesis and signalling pathway and that this higher juvenile hormone titre also resulted in prolonged developmental time in fifth instar larvae. Our results provide insights into the molecular mechanisms by which the circadian clock regulates animal development by maintaining hormonal homeostasis. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
15. Circadian clock protein CRY1 inhibits Ang Ⅱ-induced phenotypic transformation of mouse aorta smooth muscular cells
- Author
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YUE Xiuqing, SONG Qitai, LIU Chaoli, LI Sangrou, YANG Fan, CHEN Muhu, ZHONG Wu
- Subjects
cry1 ,yap1 ,angiotensin ⅱ ,phenotypic transformation ,Medicine - Abstract
Objective To investigate the effect of circadian clock protein cryptochrome 1 (CRY1) on angiotensin Ⅱ(Ang Ⅱ)-induced phenotypic transformation of mouse aorta smooth muscular cells. Methods VSMCs were divided into control group and experimental group. VSMCs were treated with different concentrations of Ang Ⅱ for various time, α-smooth muscle actin (α-SMA), osteopontin (OPN) and CRY1 expressions in VSMCs were detected via RT-qPCR and Western blot. VSMCs were transfected with knockdown vector siCRY1 and siYAP1 or overexpression vector, and the corresponding gene expression was detected with RT-PCR and Western blot. VSMCs were divided into 4 groups: Control group, Ang Ⅱ group, Ang Ⅱ+siCRY1 group and Ang Ⅱ+pcDNA-CRY1 group. siCRY1, siYAP1, pcDNA-CRY1 were transfected into VSMCs induced by Ang Ⅱ for observation on α-SMA, CRY1, OPN and YAP1 at mRNA and protein levels detected by RT-PCR and Western blot. CCK-8 method were used to measure proliferation capacity. Results VSMCs were treated with different concentrations of Ang Ⅱ for various time, the expression of CRY1 was decreased in a model of Ang Ⅱ-induced VSMC phenotypic transformation, which contractile markers down-regulated and synthetic markers up-regulated at mRNA and protein levels. After VSMCs were transfected with siCRY1, siYAP1 and pcDNA-CRY1, the expression of CRY1 decreased in siCRY1 group and increased in pcDNA-CRY1 group, while the expression of YAP1 decreased in siYAP1 group and increased in siCRY1 group.Knockdown of CRY1 could stimulate the transformation of VSMCs from contractile phenotype into synthetic phenotypes by further activating expression of synthetic markers and CRY1(P<0.05), inhibiting expression of contractile markers and YAP1(P<0.05), the proliferation of VSMCs increased significantly(P<0.05). While overexpressed CRY1 could block the phenotypic transformation, the expression of synthetic markers and CRY1 was reduced and contractile markers and YAP1 was increased both at mRNA and protein levels(P<0.05), the proliferation of VSMCs inhibited(P<0.05). Conclusions CRY1 may inhibit switch of mouse VSMCs phenotypes induced by Ang Ⅱ and inhibit VSMCs proliferation, which is potentially related to the Hippo-YAP signaling pathway.
- Published
- 2023
- Full Text
- View/download PDF
16. Relationship between cognitive dysfunction and the promoter methylation of PER1 and CRY1 in patients with cerebral small vessel disease.
- Author
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Yiwen Xu, Yugang Wang, Yi Jiang, Mengqian Liu, Wen Zhong, Zhonglin Ge, Zhichao Sun, and Xiaozhu Shen
- Subjects
CEREBRAL small vessel diseases ,METHYLATION ,DESCRIPTIVE statistics ,RESEARCH funding ,COGNITION disorders in old age ,DATA analysis software - Abstract
Background and purpose: The prevalence of cerebral small vessel disease (CSVD) is increasing due to the accelerating global aging process, resulting in a substantial burden on all countries, as cognitive dysfunction associated with CSVD is also on the rise. Clock genes have a significant impact on cognitive decline and dementia. Furthermore, the pattern of DNA methylation in clock genes is strongly associated with cognitive impairment. Thus, the aim of this study was to explore the connection between DNA promoter methylation of PER1 and CRY1 and cognitive dysfunction in patients with CSVD. Methods: We recruited patients with CSVD admitted to the Geriatrics Department of the Lianyungang Second People's Hospital between March 2021 and June 2022. Based on their Mini-Mental State Examination score, patients were categorized into two groups: 65 cases with cognitive dysfunction and 36 cases with normal cognitive function. Clinical data, 24-h ambulatory blood pressure monitoring parameters, and CSVD total load scores were collected. Moreover, we employed methylation-specific PCR to analyze the peripheral blood promoter methylation levels of clock genes PER1 and CRY1 in all CSVD patients who were enrolled. Finally, we used binary logistic regression models to assess the association between the promoter methylation of clock genes (PER1 and CRY1) and cognitive dysfunction in patients with CSVD. Results: (1) A total of 101 individuals with CSVD were included in this study. There were no statistical differences between the two groups in baseline clinical data except MMSE and AD8 scores. (2) After B/H correction, the promoter methylation rate of PER1 was higher in the cognitive dysfunction group than that in the normal group, and the difference was statistically significant (adjusted p < 0.001). (3) There was no significant correlation between the promoter methylation rates of PER1 and CRY1 in peripheral blood and circadian rhythm of blood pressure (p > 0.05). (4) Binary logistic regression models showed that the influence of promoter methylation of PER1 and CRY1 on cognitive dysfunction were statistically significant in Model 1 (p < 0.001; p = 0.025), and it still existed after adjusting for confounding factors in Model 2. Patients with the promoter methylation of PER1 gene (OR = 16.565, 95%CI, 4.057-67.628; p < 0.001) and the promoter methylation of CRY1 gene (OR = 6.017, 95%CI, 1.290-28.069; p = 0.022) were at greater risk of cognitive dysfunction compared with those with unmethylated promoters of corresponding genes in Model 2. Conclusion: The promoter methylation rate of PER1 gene was higher in the cognitive dysfunction group among CSVD patients. And the hypermethylation of the promoters of clock genes PER1 and CRY1 may be involved in affecting cognitive dysfunction in patients with CSVD. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
17. Impact of Long-Lasting Environmental Factors on Regulation Mediated by the miR-34 Family
- Author
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Peter Štefánik, Martina Morová, and Iveta Herichová
- Subjects
phthalates ,electromagnetic ,circadian ,cry1 ,cancer ,neural ,Biology (General) ,QH301-705.5 - Abstract
The present review focuses on the interactions of newly emerging environmental factors with miRNA-mediated regulation. In particular, we draw attention to the effects of phthalates, electromagnetic fields (EMFs) and a disrupted light/dark cycle. miRNAs are small non-coding RNA molecules with a tremendous regulatory impact, which is usually executed via gene expression inhibition. To address the capacity of environmental factors to influence miRNA-mediated regulation, the miR-34 family was selected for its well-described oncostatic and neuro-modulatory properties. The expression of miR-34 is in a tissue-dependent manner to some extent under the control of the circadian system. There is experimental evidence implicating that phthalates, EMFs and the circadian system interact with the miR-34 family, in both lines of its physiological functioning. The inhibition of miR-34 expression in response to phthalates, EMFs and light contamination has been described in cancer tissue and cell lines and was associated with a decline in oncostatic miR-34a signalling (decrease in p21 expression) and a promotion of tumorigenesis (increases in Noth1, cyclin D1 and cry1 expressions). The effects of miR-34 on neural functions have also been influenced by phthalates, EMFs and a disrupted light/dark cycle. Environmental factors shifted the effects of miR-34 from beneficial to the promotion of neurodegeneration and decreased cognition. Moreover, the apoptogenic capacity of miR-34 induced via phthalate administration in the testes has been shown to negatively influence germ cell proliferation. To conclude, as the oncostatic and positive neuromodulatory functions of the miR-34 family can be strongly influenced by environmental factors, their interactions should be taken into consideration in translational medicine.
- Published
- 2024
- Full Text
- View/download PDF
18. 生物钟蛋白CRY1抑制Ang Ⅱ诱导的小鼠主动脉平滑肌细胞表型蛋白标志物变化.
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岳秀青, 宋其泰, 刘超利, 李桑柔, 杨帆, 陈睦虎, and 钟武
- Abstract
Objective To investigate the effect of circadian clock protein cryptochrome 1 (CRY1) on angiotensin Ⅱ(Ang Ⅱ)-induced phenotypic transformation of mouse aorta smooth muscular cells. Methods VSMCs were divided into control group and experimental group. VSMCs were treated with different concentrations of Ang Ⅱ for various time, α-smooth muscle actin (α-SMA), osteopontin (OPN) and CRY1 expressions in VSMCs were detected via RT-qPCR and Western blot. VSMCs were transfected with knockdown vector siCRY1 and siYAP1 or overexpression vector, and the corresponding gene expression was detected with RT-PCR and Western blot. VSMCs were divided into 4 groups: Control group, Ang Ⅱ group, Ang Ⅱ+siCRY1 group and Ang Ⅱ+pcDNA-CRY1 group. siCRY1, siYAP1, pcDNA-CRY1 were transfected into VSMCs induced by Ang Ⅱ for observation on α-SMA, CRY1, OPN and YAP1 at mRNA and protein levels detected by RT-PCR and Western blot. CCK-8 method were used to measure proliferation capacity. Results VSMCs were treated with different concentrations of Ang Ⅱ for various time, the expression of CRY1 was decreased in a model of Ang Ⅱ-induced VSMC phenotypic transformation, which contractile markers down-regulated and synthetic markers up-regulated at mRNA and protein levels. After VSMCs were transfected with siCRY1, siYAP1 and pcDNA-CRY1, the expression of CRY1 decreased in siCRY1 group and increased in pcDNA-CRY1 group, while the expression of YAP1 decreased in siYAP1 group and increased in siCRY1 group.Knockdown of CRY1 could stimulate the transformation of VSMCs from contractile phenotype into synthetic phenotypes by further activating expression of synthetic markers and CRY1(P<0.05), inhibiting expression of contractile markers and YAP1(P<0.05), the proliferation of VSMCs increased significantly(P<0.05). While overexpressed CRY1 could block the phenotypic transformation, the expression of synthetic markers and CRY1 was reduced and contractile markers and YAP1 was increased both at mRNA and protein levels(P<0.05), the proliferation of VSMCs inhibited(P<0.05). Conclusions CRY1 may inhibit switch of mouse VSMCs phenotypes induced by Ang Ⅱ and inhibit VSMCs proliferation, which is potentially related to the Hippo-YAP signaling pathway. [ABSTRACT FROM AUTHOR]
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- 2023
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19. Removal of an Aminopeptidase N From Midgut Brush Border Does Not Affect Susceptibility of Spodoptera litura (Lepidoptera: Noctuidae) Larvae to Four Insecticidal Proteins of Bacillus thuringiensis (Bacillales: Bacillaceae).
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Wang, Can, Deng, Zhimin, Yuan, Jin, Xu, Kexin, Sha, Li, Guan, Xiong, Huang, Zhipeng, and Shao, Ensi
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ALANINE aminopeptidase ,BACILLUS thuringiensis ,SPODOPTERA littoralis ,BRUSH border membrane ,KNOCKOUT mice ,BACILLACEAE ,INSECT pests ,TOXINS - Abstract
Spodoptera litura is one of the most destructive lepidopteran insects of cabbages and cauliflowers in the world. Cry1 and Vip3 toxins from Bacillus thuringiensis have been reported to show toxicity in multiple lepidopteran insects. Binding of toxic molecules to specific receptors on the midgut epithelial cells is known to be a key step in the action mode of Bt toxins. Aminopeptidase N (APN) -like proteins have been reported to be binding sites of multiple Cry toxins in the midgut of Cry susceptible insects. In the present study, we identified six midgut APNs by analysis of the genome and midgut transcriptome of S. litura. CRISPR/Cas9 mediated gene-knockout system was utilized to mutate the GPI-anchor signal peptide at the C terminus of SlAPN1. SlAPN1 was verified to be removed from the midgut brush border membrane vesicles of a homozygous knockout strain of S. litura (SlAPN1-KO). Bioassay results indicated that susceptibility of the SlAPN1-KO strain to Cry1Aa, Cry1Ac, Cry1Ca, and Vip3Aa toxins was close to that of the wild-type strain of S. litura. RT–qPCR results showed that the transcriptional level of SlAPN2-6 was not up-regulated after knockout of the SlAPN1. Results in this study indicated that the SlAPN1 did not play a critical role in the pathway of toxicity of Cry1Aa, Cry1Ac, Cry1Ca, and Vip3Aa toxins in S. litura. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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20. A novel method for measurements of sleep/wake states, feeding and drinking behaviors using the tracking technique of 3D positions in freely moving mice.
- Author
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Hamada, Toshiyuki, Sutherland, Kenneth, Ishikawa, Masayori, Saito, Jun, Miyamoto, Naoki, Honma, Sato, Shirato, Hiroki, and Honma, Ken-ichi
- Subjects
- *
DRINKING behavior , *GENE expression , *BIOLUMINESCENCE , *CIRCADIAN rhythms , *RHYTHM - Abstract
We have previously developed a 3D video tracking system which enables us to analyze long-term quantitative analysis of gene expression in freely moving mice. In the present study, we improved 3D video tracking and developed a system that analyzes more detailed behavioral data. We succeeded in simultaneously analyzing sleep-wake, feeding, and drinking behavior rhythms in the same individual using our tracking system. This system will make it possible to measure gene expression in each tissue in vivo in real time in relation to the various behavioral rhythms mentioned above. • We developed 3D video tracking system to analyze the behavior in real time. • Our system can simultaneously measure three different behavioral rhythms in the same animal. • Our system will be useful for measuring gene expression that changes with behavioral rhythms. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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21. Efficacy of local Bacillus thuringiensis isolates against tomato leaf miner (Tuta absoluta) larvae on tomato plants under screenhouse conditions
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E.O. Akinyelure, D.A. Machido, and H.I. Atta
- Subjects
bacillus thuringiensis ,biopesticide ,cry1 ,pest control ,tomato ,Agriculture - Abstract
Abstract. The negative impact of chemical pesticides on the environment and the increased resistance of tomato leafminer (Tuta absoluta) field populations to chemical pesticides have promoted research on alternative control measures. Biological control with Bacillus thuringiensis (Bt) may be an alternative, especially against larval instars of T. absoluta. A total of five B. thuringiensis strains were isolated from soil sampled from two different Cow range lands in Zaria, Nigeria; and they were screened for the presence of the cry1 genes using polymerase chain reaction. Of the five isolates, two (40%) showed the presence of the cry1 genes. Results of the bioassay conducted against 2nd instar larvae of T. absoluta at 28±2°C indicated that each of the concentrations (25, 50, 75 and 100 ppm) of the spore crystal mixtures derived from the isolates harbouring cry1 genes caused significant mortality to larvae of T. absoluta after 72 hours in comparison to the control (0 ppm). Probit analysis was used to determine the LC50 and LT50 values. When the treatments were assessed at 48 and 72 hours, LC50 values against larvae were 74.1 and 25.3 ppm for isolate F3, while the LT50 values of that same isolate F3 at 100 ppm and 75 ppm were 36.3 and 42.7 hours, respectively. B. thuringiensis strain F2 achieved 68.7% reduction in T. absoluta damage on tomato plants, while B. thuringiensis isolate F3 achieved 71.3% reduction. Therefore, the spore crystal mixture derived from indigenous Bt strains is the candidate to be used for foliar application against T. absoluta and it is recommended into integrated pest control strategies for the management of T. absoluta.
- Published
- 2021
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22. Silybin A enhances circadian clock by targeting CRY1 and disrupting its interaction with CLOCK
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Weijie Bian, Weilin Zhang, Hao Liang, Xiaowen Xie, and Luhua Lai
- Subjects
Circadian clock ,Amplitude ,Clock-enhancing molecule (CEMs) ,CRY1 ,Silymarin ,Silybin A ,Other systems of medicine ,RZ201-999 ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Circadian clock governs a large array of physiological and metabolic functions. The amplitude decline of circadian rhythm is associated with various chronic diseases. However, few clock enhancing-molecules are known. CRY1 is one of the main components of the core circadian clock and its binding with CLOCK leads to decreased transcriptional activity. Thus, compounds interfering with CRY1-CLOCK interaction may enhance circadian rhythm. Natural products are rich sources of drug discovery and herb-based virtual screen provides an efficient way to identify active herbs. Here, by performing herb-based virtual screen against the CLOCK interacting pocket in CRY1 and cell-based assays, we found that Silybum marianum, a widely used medical plant, can activate circadian clock transcription. Molecular level studies showed that its extract silymarin can bind to CRY1 and disrupt CRY1-CLOCK interaction. Further computational and experimental analysis revealed that silybin A is the main bioactive compound that enhances the amplitude of circadian rhythm by reducing the negative arm of the transcription/translation feedback loop. Silybum marianum and its main extract, silymarin, were reported to have hepatoprotective, cardiovascular-protective, antidiabetic, anti-inflammatory, antioxidative, and anti-cancer effects with unclear mechanism. Our study revealed that silymarin and the purified compound silybin A may perform their pharmacological functions by modulating circadian clock. We also demonstrate that disrupting CRY1-CLOCK interaction provides a new route for upregulating circadian rhythm and the CLOCK binding site in CRY1 serves as a druggable pocket for discovering clock enhancing molecules for treating related diseases.
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- 2022
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23. Role of cardiotrophin‐1 in the regulation of metabolic circadian rhythms and adipose core clock genes in mice and characterization of 24‐h circulating CT‐1 profiles in normal‐weight and overweight/obese subjects
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Lópeź‐Yoldi, Miguel, Stanhope, Kimber L, Garaulet, Marta, Chen, X Guoxia, Marcos‐Gómeź, Beatriz, Carrasco‐Benso, María Paz, Santa Maria, Eva M, Escoté, Xavier, Lee, Vivien, Nunez, Marinelle V, Medici, Valentina, Martínez‐Ansó, Eduardo, Sáinź, Neira, Huerta, Ana E, Laiglesia, Laura M, Prieto, Jesuś, Martínez, J Alfredo, Bustos, Matilde, Havel, Peter J, and Moreno‐Aliaga, Maria J
- Subjects
Medical Physiology ,Biomedical and Clinical Sciences ,Nutrition ,Sleep Research ,Obesity ,Genetics ,2.1 Biological and endogenous factors ,Metabolic and endocrine ,Adipose Tissue ,Adolescent ,Adult ,Animals ,CLOCK Proteins ,Circadian Rhythm ,Cytokines ,Female ,Humans ,Male ,Mice ,Mice ,Inbred C57BL ,Oxygen Consumption ,adipose tissue ,obesity ,Bmal1 ,Per2 ,Cry1 ,Biochemistry and Cell Biology ,Physiology ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medical physiology - Abstract
Cardiotrophin (CT)-1 is a regulator of glucose and lipid homeostasis. In the present study, we analyzed whether CT-1 also acts to peripherally regulate metabolic rhythms and adipose tissue core clock genes in mice. Moreover, the circadian pattern of plasma CT-1 levels was evaluated in normal-weight and overweight subjects. The circadian rhythmicity of oxygen consumption rate (Vo2) was disrupted in aged obese CT-1-deficient (CT-1-/-) mice (12 mo). Although circadian rhythms of Vo2 were conserved in young lean CT-1-/- mice (2 mo), CT-1 deficiency caused a phase shift of the acrophase. Most of the clock genes studied (Clock, Bmal1, and Per2) displayed a circadian rhythm in adipose tissue of both wild-type (WT) and CT-1-/- mice. However, the pattern was altered in CT-1-/- mice toward a lower percentage of the rhythm or lower amplitude, especially for Bmal1 and Clock. Moreover, CT-1 mRNA levels in adipose tissue showed significant circadian fluctuations in young WT mice. In humans, CT-1 plasma profile exhibited a 24-h circadian rhythm in normal-weight but not in overweight subjects. The 24-h pattern of CT-1 was characterized by a pronounced increase during the night (from 02:00 to 08:00). These observations suggest a potential role for CT-1 in the regulation of metabolic circadian rhythms.-López-Yoldi, M., Stanhope, K. L., Garaulet, M., Chen, X. G., Marcos-Gómez, B., Carrasco-Benso, M. P., Santa Maria, E. M., Escoté, X., Lee, V., Nunez, M. V., Medici, V., Martínez-Ansó, E., Sáinz, N., Huerta, A. E., Laiglesia, L. M., Prieto, J., Martínez, J. A., Bustos, M., Havel, P. J., Moreno-Aliaga, M. J. Role of cardiotrophin-1 in the regulation of metabolic circadian rhythms and adipose core clock genes in mice and characterization of 24-h circulating CT-1 profiles in normal-weight and overweight/obese subjects.
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- 2017
24. Differential photoregulation of the nuclear and cytoplasmic CRY1 in Arabidopsis.
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Liu, Siyuan, Zhang, Li, Gao, Lin, Chen, Ziyin, Bie, Yaxue, Zhao, Qiannan, Zhang, Shanshan, Hu, Xiaohua, Liu, Qing, Wang, Xu, and Wang, Qin
- Subjects
- *
BLUE light , *ARABIDOPSIS , *PROTEIN kinases , *CRYPTOCHROMES - Abstract
Summary: Arabidopsis cryptochrome 1 (CRY1) is a blue light receptor distributed in the nucleus and cytoplasm. The nuclear CRY1, but not cytoplasmic CRY1, mediates blue light inhibition of hypocotyl elongation. However, the photobiochemical mechanisms distinguishing the CRY1 protein in the two subcellular compartments remains unclear. Here we show that the nuclear CRY1, but not the cytoplasmic CRY1, is regulated by phosphorylation, polyubiquitination and 26S proteasome‐dependent proteolysis in response to blue light. The blue light‐dependent CRY1 degradation is observed only under high fluences of blue light.The nuclear specificity and high fluence dependency of CRY1 explain why this photochemical regulatory mechanism of CRY1 was not observed previously and it further supports the hypothesis that CRY1 is a high light receptor regulating photomorphogenesis.We further show that the nuclear CRY1, but not cytoplasmic CRY1, undergoes blue light‐dependent phosphorylation by photoregulatory protein kinase 1 (PPK1) followed by polyubiquitination by the E3 ubiquitin ligase Cul4COP1/SPAs, resulting in the blue light‐dependent proteolysis. Both phosphorylation and ubiquitination of nuclear CRY1 are inhibited by blue‐light inhibitor of cryptochromes 1 (BIC1), demonstrating the involvement of photo‐oligomerization of the nuclear CRY1.These finding reveals a photochemical mechanism that differentially regulates the physiological activity of the CRY1 photoreceptor in distinct subcellular compartments. See also the Commentary on this article by Batschauer, 234: 1109–1111. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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25. Expression Analysis and Interaction Protein Screening of CRY1 in Strawberry.
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Ye, Yuyun, Li, Ruiling, Pu, Wenchao, Zhang, Yunting, Jiang, Leiyu, Li, Hao, Liu, Yongqiang, Ye, Yuntian, Yue, Maolan, Lin, Yuanxiu, Chen, Qing, Zhang, Yong, Luo, Ya, Li, Mengyao, Wang, Xiaorong, and Tang, Haoru
- Subjects
PROTEIN-protein interactions ,PROTEIN analysis ,BLUE light ,STRAWBERRIES ,ABIOTIC stress ,FLOWERING time - Abstract
Cryptochrome 1 (CRY1), a main blue light receptor protein, plays a significant role in several biological processes. However, the expression patterns and function of CRY1 in strawberry have not been identified. Here, the expression profile of CRY1 in different tissues and developmental stages of strawberry fruit, and expression patterns response to abiotic stresses (low temperature, salt and drought) were analyzed. Its subcellular localization, interaction proteins and heterologous overexpression in tobacco were also investigated. The results showed that CRY1 was mainly expressed in leaves and fruits with an expression peak at the initial red stage in strawberry fruit. Abiotic stresses could significantly induce the expression of CRY1. The CRY1 protein was located in both nucleus and cytoplasm. Five proteins (CSN5a-like, JAZ5, eIF3G. NF-YC9, and NDUFB9) interacting with CRY1 were discovered. Genes related flowering times, such as HY5 and CO, in three overexpressed FaCRY1 tobacco lines, were significantly upregulated. Taken together, our results suggested CRY1 have a broad role in biological processes in strawberry. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
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26. Signaling Mechanisms by Arabidopsis Cryptochromes.
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Ponnu, Jathish and Hoecker, Ute
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CRYPTOCHROMES ,ARABIDOPSIS ,TRANSCRIPTION factors ,ARABIDOPSIS thaliana ,BLUE light ,ADENOSINES - Abstract
Cryptochromes (CRYs) are blue light photoreceptors that regulate growth, development, and metabolism in plants. In Arabidopsis thaliana (Arabidopsis), CRY1 and CRY2 possess partially redundant and overlapping functions. Upon exposure to blue light, the monomeric inactive CRYs undergo phosphorylation and oligomerization, which are crucial to CRY function. Both the N- and C-terminal domains of CRYs participate in light-induced interaction with multiple signaling proteins. These include the COP1/SPA E3 ubiquitin ligase, several transcription factors, hormone signaling intermediates and proteins involved in chromatin-remodeling and RNA N6 adenosine methylation. In this review, we discuss the mechanisms of Arabidopsis CRY signaling in photomorphogenesis and the recent breakthroughs in Arabidopsis CRY research. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
27. Signaling Mechanisms by Arabidopsis Cryptochromes
- Author
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Jathish Ponnu and Ute Hoecker
- Subjects
cryptochromes ,CRY1 ,CRY2 ,Arabidopsis ,blue light ,signal transduction ,Plant culture ,SB1-1110 - Abstract
Cryptochromes (CRYs) are blue light photoreceptors that regulate growth, development, and metabolism in plants. In Arabidopsis thaliana (Arabidopsis), CRY1 and CRY2 possess partially redundant and overlapping functions. Upon exposure to blue light, the monomeric inactive CRYs undergo phosphorylation and oligomerization, which are crucial to CRY function. Both the N- and C-terminal domains of CRYs participate in light-induced interaction with multiple signaling proteins. These include the COP1/SPA E3 ubiquitin ligase, several transcription factors, hormone signaling intermediates and proteins involved in chromatin-remodeling and RNA N6 adenosine methylation. In this review, we discuss the mechanisms of Arabidopsis CRY signaling in photomorphogenesis and the recent breakthroughs in Arabidopsis CRY research.
- Published
- 2022
- Full Text
- View/download PDF
28. Efficacy of local Bacillus thuringiensis isolates against tomato leaf miner (Tuta absoluta) larvae on tomato plants under screenhouse conditions.
- Author
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Akinyelure, E. O., Machido, D. A., and Atta, H. I.
- Subjects
- *
BACILLUS thuringiensis , *BIOPESTICIDES , *PEST control , *TOMATOES , *PESTICIDES - Abstract
The negative impact of chemical pesticides on the environment and the increased resistance of tomato leafminer (Tuta absoluta) field populations to chemical pesticides have promoted research on alternative control measures. Biological control with Bacillus thuringiensis (Bt) may be an alternative, especially against larval instars of T. absoluta. A total of five B. thuringiensis strains were isolated from soil sampled from two different Cow range lands in Zaria, Nigeria; and they were screened for the presence of the cry1 genes using polymerase chain reaction. Of the five isolates, two (40%) showed the presence of the cry1 genes. Results of the bioassay conducted against 2nd instar larvae of T. absoluta at 28±2°C indicated that each of the concentrations (25, 50, 75 and 100 ppm) of the spore crystal mixtures derived from the isolates harbouring cry1 genes caused significant mortality to larvae of T. absoluta after 72 hours in comparison to the control (0 ppm). Probit analysis was used to determine the LC50 and LT50 values. When the treatments were assessed at 48 and 72 hours, LC50 values against larvae were 74.1 and 25.3 ppm for isolate F3, while the LT50 values of that same isolate F3 at 100 ppm and 75 ppm were 36.3 and 42.7 hours, respectively. B. thuringiensis strain F2 achieved 68.7% reduction in T. absoluta damage on tomato plants, while B. thuringiensis isolate F3 achieved 71.3% reduction. Therefore, the spore crystal mixture derived from indigenous Bt strains is the candidate to be used for foliar application against T. absoluta and it is recommended into integrated pest control strategies for the management of T. absoluta. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
29. Expression of cell proliferation regulatory factors bricd5, tnfrsf21, cdk1 correlates with expression of clock gene cry1 in testes of Hu rams during puberty.
- Author
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Huang, Yongjie, Jiang, Xunping, Yan, Yinan, Liu, Guiqiong, and Liu, Chenhui
- Abstract
Background: Cryptochrome 1 (cry1), the core regulator of the circadian clock, is essential for ontogeny and mammalian reproduction. Unlike in other tissues, the cry1 gene have noncircadian functions in spermatogenesis, which implies the unique role of cry1 gene in the development of testis. The role of cry1 during the puberty has not been described yet. This study aimed to explore the relationship between cry1 expression and spermatogenic cell numbers. Methods and results: We analyzed testicular tissues from Hu sheep aged 0–180 days by hematoxylin and eosin staining, measured cry1 and cell proliferation regulatory factors (bricd5, tnfrsf21, cdk1) expression by quantitative real-time PCR and characterized the transcription factor in the 5′ flanking region of cry1 gene. The data revealed that the number of spermatocytes and early spermatocytes increased rapidly from 90 to 120 dpp (day postpartum). Correspondingly, there was a marked variation in the cry1 and cell proliferation related genes (bricd5, tnfrsf21, cdk1) mRNA expression in the testes from the age of 90 days to 180 days (p < 0.05). We also identified some transcription factors (tcfl5) related to cell proliferation. Conclusions: There is a significant causal relationship between the transcription level of cry1 gene in Hu sheep testes and the number of spermatogenic cells. It is speculated that cry1 gene may regulate the proliferation of spermatogenic cells by regulating the expression of cell proliferation related genes such as bricd5, tnfrsf21 and cdk1. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
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30. CRY1 Regulates Chemoresistance in Association With NANOG by Inhibiting Apoptosis via STAT3 Pathway in Patients With Cervical Cancer.
- Author
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GWAN HEE HAN, JULIE KIM, HEE YUN, HANBYOUL CHO, JOON-YONG CHUNG, JAE-HOON KIM, and HEWITT, STEPHEN M.
- Subjects
CERVICAL cancer ,STAT proteins ,STEM cell factor ,DRUG resistance in cancer cells ,CANCER patients - Abstract
Background/Aim: Cryptochrome 1 (CRY1), a core circadian gene, modulates circadian rhythm and carcinogenesis. Here, we investigated the role of CRY1 and its correlation with NANOG, a stem cell transcription factor, in cervical cancer. Materials and Methods: Immunohistochemistry with tissue microarray was performed to evaluate CRY1 and NANOG expression in cervical cancer tissues, and their functional roles were assessed in cervical cancer cell lines. Results: CRY1 or NANOG was significantly over-expressed in cervical cancer tissues. Notably, combined over-expression of CRY1 and NANOG was correlated with a significantly poor OS and DFS and showed a stronger predictive value for chemoradiation response than each single protein. Furthermore, siCRY1 induced apoptosis, decreased NANOG expression, suppressed STAT3 signalling, and activated p53 signalling in cervical cancer cell lines. Conclusion: CRY1 and NANOG overexpression serves as a strong predictive biomarker for prognosis and chemoradiation response, and may be a new therapeutic target in patients with cervical cancer. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
31. Circadian Oscillation of Natural Antisense Transcripts Related to Human Core Clock Genes.
- Author
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Hanjani, Parisa Najari and Golalipour, Masoud
- Subjects
- *
CIRCADIAN rhythms , *GENETIC regulation , *ANTISENSE RNA , *OSCILLATIONS , *BIOLOGICAL rhythms - Abstract
Background: Circadian clocks are autonomous intracellular oscillators that synchronize metabolic and physiological processes with the external signals. So, misalignment of environmental and endogenous circadian rhythms leads to disruption of biological activities in living organisms. Noncoding transcripts including antisense RNAs are an important component of the molecular clocks. Commonly, the antisense transcripts are involved in the regulation of gene expression. PER2AS and CRY1AS are the only known Natural Antisense Transcripts (NAT) among the core clock genes, which overlap with the PER2 and CRY1 genes, respectively. In this study, we hypothesized that PER2AS and CRY1AS like the other clock genes, exhibit the oscillatory behavior in a 24-hour period and affect the expression of PER2 and CRY1. Methods: First, the A549 cell line was cultured under standard conditions. After horse serum shock, RNA extraction and cDNA synthesis was performed; then the expression fluctuations of PER2AS, CRY1AS, PER2, and CRY1 were measured with Real-time PCR. Results: Our result showed that PER2AS and CRY1AS had similar oscillation patterns with their sense strand during 24-hour period. Conclusions: Therefore, we suggested that PER2AS and CRY1AS transcripts probably by preventing the interaction of miRNAs with PER2 and CRY1 mRNAs, influence the expression of them, positively. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
32. Restoration of H3k27me3 Modification Epigenetically Silences Cry1 Expression and Sensitizes Leptin Signaling to Reduce Obesity‐Related Properties
- Author
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Yan Wei, Jun Chen, Xing Xu, Fan Li, Kun Wu, Yingying Jiang, Yuqing Rao, Chen Zhao, Wantao Chen, and Xu Wang
- Subjects
Cry1 ,hypothalamus ,Kdm6a ,leptin ,obesity ,Science - Abstract
Abstract The trimethylation on histone H3 lysine 27 (H3k27me3), a transcriptionally repressive epigenetic mark of permissive chromatin, can be removed by the histone lysine demethylase 6a (Kdm6a). However, the physiological function of H3k27me3 and Kdm6a on circadian genes remains largely elusive. With the ChIP‐Seq and mRNA microarray assays, a critical role is identified for Kdm6a in the regulation of H3k27me3 to impact the expression of Crytochrome 1 (Cry1) in the hypothalamus of diet induced obesity mice. More importantly, both conditional knockout and pharmacological inhibition of Kdm6a reduce body weight and stabilize blood glucose homeostasis. Although a Kdm6a inhibitor fails to decrease body weight in leptin receptor‐deficient db/db mice, it significantly decreases Cry1 expression, enhances sensitivity to exogenous leptin administration, and blocks body weight increases in endo‐leptin‐deficient ob/ob mice. Moreover, gene analysis of the human hypothalamus further reveals a positive correlation between Kdm6a and Cry1. The results show that inhibition of Kdm6a reduces the Cry1 expression and sensitizes leptin signaling to combat obesity‐related disease. Therefore, it implicates Kdm6a as an attractive drug target for obesity and metabolic disorders.
- Published
- 2021
- Full Text
- View/download PDF
33. Restoration of H3k27me3 Modification Epigenetically Silences Cry1 Expression and Sensitizes Leptin Signaling to Reduce Obesity‐Related Properties.
- Author
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Wei, Yan, Chen, Jun, Xu, Xing, Li, Fan, Wu, Kun, Jiang, Yingying, Rao, Yuqing, Zhao, Chen, Chen, Wantao, and Wang, Xu
- Subjects
- *
HISTONES , *HISTONE demethylases , *LEPTIN , *LEPTIN receptors , *HYPOTHALAMUS , *DRUG target , *BODY weight , *OBESITY - Abstract
The trimethylation on histone H3 lysine 27 (H3k27me3), a transcriptionally repressive epigenetic mark of permissive chromatin, can be removed by the histone lysine demethylase 6a (Kdm6a). However, the physiological function of H3k27me3 and Kdm6a on circadian genes remains largely elusive. With the ChIP‐Seq and mRNA microarray assays, a critical role is identified for Kdm6a in the regulation of H3k27me3 to impact the expression of Crytochrome 1 (Cry1) in the hypothalamus of diet induced obesity mice. More importantly, both conditional knockout and pharmacological inhibition of Kdm6a reduce body weight and stabilize blood glucose homeostasis. Although a Kdm6a inhibitor fails to decrease body weight in leptin receptor‐deficient db/db mice, it significantly decreases Cry1 expression, enhances sensitivity to exogenous leptin administration, and blocks body weight increases in endo‐leptin‐deficient ob/ob mice. Moreover, gene analysis of the human hypothalamus further reveals a positive correlation between Kdm6a and Cry1. The results show that inhibition of Kdm6a reduces the Cry1 expression and sensitizes leptin signaling to combat obesity‐related disease. Therefore, it implicates Kdm6a as an attractive drug target for obesity and metabolic disorders. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
34. Multivariate transcriptome analysis identifies networks and key drivers of chronic lymphocytic leukemia relapse risk and patient survival.
- Author
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Griffen, Ti'ara L., Dammer, Eric B., Dill, Courtney D., Carey, Kaylin M., Young, Corey D., Nunez, Sha'Kayla K., Ohandjo, Adaugo Q., Kornblau, Steven M., and Lillard Jr., James W.
- Subjects
- *
CHRONIC lymphocytic leukemia , *DISEASE relapse , *MULTIVARIATE analysis , *OVERALL survival , *DRUG target , *GENE regulatory networks - Abstract
Background: Chronic lymphocytic leukemia (CLL) is an indolent heme malignancy characterized by the accumulation of CD5+ CD19+ B cells and episodes of relapse. The biological signaling that influence episodes of relapse in CLL are not fully described. Here, we identify gene networks associated with CLL relapse and survival risk. Methods: Networks were investigated by using a novel weighted gene network co-expression analysis method and examining overrepresentation of upstream regulators and signaling pathways within co-expressed transcriptome modules across clinically annotated transcriptomes from CLL patients (N = 203). Gene Ontology analysis was used to identify biological functions overrepresented in each module. Differential Expression of modules and individual genes was assessed using an ANOVA (Binet Stage A and B relapsed patients) or T-test (SF3B1 mutations). The clinical relevance of biomarker candidates was evaluated using log-rank Kaplan Meier (survival and relapse interval) and ROC tests. Results: Eight distinct modules (M2, M3, M4, M7, M9, M10, M11, M13) were significantly correlated with relapse and differentially expressed between relapsed and non-relapsed Binet Stage A CLL patients. The biological functions of modules positively correlated with relapse were carbohydrate and mRNA metabolism, whereas negatively correlated modules to relapse were protein translation associated. Additionally, M1, M3, M7, and M13 modules negatively correlated with overall survival. CLL biomarkers BTK, BCL2, and TP53 were co-expressed, while unmutated IGHV biomarker ZAP70 and cell survival-associated NOTCH1 were co-expressed in modules positively correlated with relapse and negatively correlated with survival days. Conclusions: This study provides novel insights into CLL relapse biology and pathways associated with known and novel biomarkers for relapse and overall survival. The modules associated with relapse and overall survival represented both known and novel pathways associated with CLL pathogenesis and can be a resource for the CLL research community. The hub genes of these modules, e.g., ARHGAP27P2, C1S, CASC2, CLEC3B, CRY1, CXCR5, FUT5, MID1IP1, and URAHP, can be studied further as new therapeutic targets or clinical markers to predict CLL patient outcomes. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
35. Melatonin mediated transcriptional mechanisms in the ovine pars tuberalis
- Author
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West, Alexander, Davis, Julian, and Loudon, Andrew
- Subjects
612.4 ,Sheep ,ovis aries ,Melatonin ,pars tuberalis ,Cry1 ,Nampt ,Npas4 ,MT1 - Abstract
In seasonal mammals the duration of nocturnal melatonin secretion accurately reflects the environmental photoperiod. The endocrine rhythm is decoded by a specialised portion of the pituitary gland (the pars tuberalis, PT) which then relays this information to the pars distalis and hypothalamus, precipitating huge annual changes in physiology and behaviour. However how the PT decodes the melatonin signal is currently unknown. Melatonin influences gene transcription in the ovine PT at its onset and offset, and the phase relationship of these two groups is believed to form the underlying mechanism by which the PT integrates seasonal time. The transcripts induced at melatonin offset are understood to be under the control of a seasonally gated cAMP mechanism. Conversely processes involved in melatonin-mediated gene induction are currently not understood.The work in this thesis ultimately aims to reveal how the seasonal melatonin signal is decoded by the PT. To this end melatonin-mediated gene induction has been characterised through RNAseq, the highly displaced cohorts submitted to bioinformatic promoter analysis and the paradigm tested though in vitro modelling techniques.In this study a 1.5 h infusion with melatonin acutely regulated 219 transcripts in the ovine PT (115 induced, 104 repressed, >1.5 fold change), confirming previous association of several genes (including Cry1, MT1, Gadd45g, Nampt and Npas4) to rapid melatonin control. Gross promoter analysis of these groups indicated that the induced gene cohort was significantly enriched for GC content and CpG islands suggesting the involvement of epigenetic mechanisms of transcriptional control. Further bioinformatic analysis specifically implicated the importance of transcription factors ZFP161 and PAX5 in melatonin-mediated gene induction in the PT. Several immortalised cell lines were screened for the presence of a functional melatonin receptor. Two strains (MCF7 oMT1 and NES2Y) exhibited significant attenuation of forskolin-mediated cAMP accumulation when co-treated with melatonin, a hallmark of melatonin Gαi-coupled protein receptor signalling. These lines were subsequently evaluated as models of melatonin-mediated gene induction of the sheep PT through ovine promoter reporter assays of Cry1, Nampt, NeuroD1 and Npas4. However, treatment with melatonin failed to evoke a reporter response suggesting that the cell line models were inadequately equipped to reflect PT biology. Subsequently a protocol was established to culture ovine PT explants culture which faithfully recapitulated melatonin mediated transcriptional dynamics in vitro, providing a possible tool for the future investigation of the PT. Lastly, previous work has shown the transcriptional profile of Npas4 to peak highly and transiently, pre-empting the expression of other melatonin-induced genes. Using a COS7 cell line model, heterologously-expressed NPAS4 was shown to form functional heterodimeric partnerships with ARNT and ARNTL and transactivate both Cry1 and Nampt promoter reporters through novel binding sites. Collectively these data indicated NPAS4 to act as an immediate activator of melatonin regulated circuits
- Published
- 2013
36. Expression Analysis and Interaction Protein Screening of CRY1 in Strawberry
- Author
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Yuyun Ye, Ruiling Li, Wenchao Pu, Yunting Zhang, Leiyu Jiang, Hao Li, Yongqiang Liu, Yuntian Ye, Maolan Yue, Yuanxiu Lin, Qing Chen, Yong Zhang, Ya Luo, Mengyao Li, Xiaorong Wang, and Haoru Tang
- Subjects
strawberry ,CRY1 ,blue light receptor ,heterologous expression ,abiotic stress ,flowering time ,Plant culture ,SB1-1110 - Abstract
Cryptochrome 1 (CRY1), a main blue light receptor protein, plays a significant role in several biological processes. However, the expression patterns and function of CRY1 in strawberry have not been identified. Here, the expression profile of CRY1 in different tissues and developmental stages of strawberry fruit, and expression patterns response to abiotic stresses (low temperature, salt and drought) were analyzed. Its subcellular localization, interaction proteins and heterologous overexpression in tobacco were also investigated. The results showed that CRY1 was mainly expressed in leaves and fruits with an expression peak at the initial red stage in strawberry fruit. Abiotic stresses could significantly induce the expression of CRY1. The CRY1 protein was located in both nucleus and cytoplasm. Five proteins (CSN5a-like, JAZ5, eIF3G. NF-YC9, and NDUFB9) interacting with CRY1 were discovered. Genes related flowering times, such as HY5 and CO, in three overexpressed FaCRY1 tobacco lines, were significantly upregulated. Taken together, our results suggested CRY1 have a broad role in biological processes in strawberry.
- Published
- 2022
- Full Text
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37. Isolation, identification, and toxicity of native Bacillus thuringiensis against Spodoptera litura
- Author
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Linh, Ton Bao, Hang, Phan Thi Thu, Trang, Le Thi Huyen, Phong, Nguyen Vu, Anh, Ton Trang, and Don, Le Dinh
- Published
- 2018
- Full Text
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38. Functional genetic variation in the Rev‐Erbα pathway and lithium response in the treatment of bipolar disorder
- Author
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McCarthy, MJ, Nievergelt, CM, Shekhtman, T, Kripke, DF, Welsh, DK, and Kelsoe, JR
- Subjects
Pharmacology and Pharmaceutical Sciences ,Biological Sciences ,Biomedical and Clinical Sciences ,Genetics ,Brain Disorders ,Sleep Research ,Mental Health ,Aetiology ,2.1 Biological and endogenous factors ,Mental health ,Antimanic Agents ,Bipolar Disorder ,Cell Line ,Tumor ,Circadian Clocks ,Circadian Rhythm Signaling Peptides and Proteins ,DNA ,Complementary ,Diagnostic and Statistical Manual of Mental Disorders ,Genetic Association Studies ,Genetic Variation ,Genotype ,Glycogen Synthase Kinase 3 ,Humans ,Lithium Carbonate ,Nuclear Receptor Subfamily 1 ,Group D ,Member 1 ,Polymorphism ,Single Nucleotide ,RNA ,Bipolar disorder ,circadian rhythm ,CRY1 ,glycogen synthase kinase ,GSK3 ss ,lithium ,NR1D1 ,Rev-Erb-a ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Neurology & Neurosurgery ,Neurosciences - Abstract
Bipolar disorder (BD) is characterized by disruptions in circadian rhythms such as sleep and daily activity that often normalize after lithium treatment in responsive patients. As lithium is known to interact with the circadian clock, we hypothesized that variation in circadian 'clock genes' would be associated with lithium response in BD. We determined genotype for 16 variants in seven circadian clock genes and conducted a candidate gene association study of these in 282 Caucasian patients with BD who were previously treated with lithium. We found that a variant in the promoter of NR1D1 encoding Rev-Erbα (rs2071427) and a second variant in CRY1 (rs8192440) were nominally associated with good treatment response. Previous studies have shown that lithium regulates Rev-Erbα protein stability by inhibiting glycogen synthase kinase 3β (GSK3β). We found that GSK3β genotype was also suggestive of a lithium response association, but not statistically significant. However, when GSK3β and NR1D1 genotypes were considered together, they predicted lithium response robustly and additively in proportion to the number of response-associated alleles. Using lymphoblastoid cell lines from patients with BD, we found that both the NR1D1 and GSK3β variants are associated with functional differences in gene expression. Our findings support a role for Rev-Erbα in the therapeutic mechanism of lithium and suggest that the interaction between Rev-Erbα and GSK3β may warrant further study.
- Published
- 2011
39. Recombinant Expression of ABCC2 Variants Confirms the Importance of Mutations in Extracellular Loop 4 for Cry1F Resistance in Fall Armyworm
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Laura Franz, Klaus Raming, and Ralf Nauen
- Subjects
Bacillus thuringiensis ,Spodoptera frugiperda ,resistance ,Cry1 ,Sf9 cells ,ABC transporter ,Medicine - Abstract
Fall armyworm (FAW), Spodoptera frugiperda, is a highly destructive and invasive global noctuid pest. Its control is based on insecticide applications and Bacillus thuringiensis (Bt) insecticidal Cry toxins expressed in transgenic crops, such as Cry1F in Bt corn. Continuous selection pressure has resulted in populations that are resistant to Bt corn, particularly in Brazil. FAW resistance to Cry1F was recently shown to be conferred by mutations of ATP-binding cassette transporter C2 (ABCC2), but several mutations, particularly indels in extracellular loop 4 (ECL4), are not yet functionally validated. We addressed this knowledge gap by baculovirus-free insect cell expression of ABCC2 variants (and ABCC3) by electroporation technology and tested their response to Cry1F, Cry1A.105 and Cry1Ab. We employed a SYTOXTM orange cell viability test measuring ABCC2-mediated Bt toxin pore formation. In total, we tested seven different FAW ABCC2 variants mutated in ECL4, two mutants modified in nucleotide binding domain (NBD) 2, including a deletion mutant lacking NBD2, and S. frugiperda ABCC3. All tested ECL4 mutations conferred high resistance to Cry1F, but much less to Cry1A.105 and Cry1Ab, whereas mutations in NBD2 hardly affected Bt toxin activity. Our study confirms the importance of indels in ECL4 for Cry1F resistance in S. frugiperda ABCC2.
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- 2022
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40. Cry2 Is Critical for Circadian Regulation of Myogenic Differentiation by Bclaf1-Mediated mRNA Stabilization of Cyclin D1 and Tmem176b
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Matthew Lowe, Jacob Lage, Ellen Paatela, Dane Munson, Reilly Hostager, Ce Yuan, Nobuko Katoku-Kikyo, Mercedes Ruiz-Estevez, Yoko Asakura, James Staats, Mulan Qahar, Michaela Lohman, Atsushi Asakura, and Nobuaki Kikyo
- Subjects
Bclaf1 ,cell cycle ,cell fusion ,circadian rhythm ,Cry1 ,Cry2 ,Biology (General) ,QH301-705.5 - Abstract
Summary: Circadian rhythms regulate cell proliferation and differentiation; however, little is known about their roles in myogenic differentiation. Our synchronized differentiation studies demonstrate that myoblast proliferation and subsequent myotube formation by cell fusion occur in circadian manners. We found that one of the core regulators of circadian rhythms, Cry2, but not Cry1, is critical for the circadian patterns of these two critical steps in myogenic differentiation. This is achieved through the specific interaction between Cry2 and Bclaf1, which stabilizes mRNAs encoding cyclin D1, a G1/S phase transition regulator, and Tmem176b, a transmembrane regulator for myogenic cell fusion. Myoblasts lacking Cry2 display premature cell cycle exit and form short myotubes because of inefficient cell fusion. Consistently, muscle regeneration is impaired in Cry2−/− mice. Bclaf1 knockdown recapitulated the phenotypes of Cry2 knockdown: early cell cycle exit and inefficient cell fusion. This study uncovers a post-transcriptional regulation of myogenic differentiation by circadian rhythms.
- Published
- 2018
- Full Text
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41. Mechanisms of Cryptochrome-Mediated Photoresponses in Plants.
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Wang, Qin and Lin, Chentao
- Abstract
Cryptochromes are blue-light receptors that mediate photoresponses in plants. The genomes of most land plants encode two clades of cryptochromes, CRY1 and CRY2, which mediate distinct and overlapping photoresponses within the same species and between different plant species. Photoresponsive protein–protein interaction is the primary mode of signal transduction of cryptochromes. Cryptochromes exist as physiologically inactive monomers in the dark; the absorption of photons leads to conformational change and cryptochrome homooligomerization, which alters the affinity of cryptochromes interacting with cryptochrome-interacting proteins to form various cryptochrome complexes. These cryptochrome complexes, collectively referred to as the cryptochrome complexome, regulate transcription or stability of photoresponsive proteins to modulate plant growth and development. The activity of cryptochromes is regulated by photooligomerization; dark monomerization; cryptochrome regulatory proteins; and cryptochrome phosphorylation, ubiquitination, and degradation. Most of the more than 30 presently known cryptochrome-interacting proteins are either regulated by other photoreceptors or physically interactingwith the protein complexes of other photoreceptors. Some cryptochrome-interacting proteins are also hormonal signaling or regulatory proteins. These two mechanisms enable cryptochromes to integrate blue-light signals with other internal and external signals to optimize plant growth and development. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
42. Effect of a single bout of exercise on clock gene expression in human leukocyte.
- Author
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Yoshiaki Tanaka, Hitomi Ogata, Momoko Kayaba, Akira Ando, Insung Park, Katsuhiko Yajima, Akihiro Araki, Chihiro Suzuki, Haruka Osumi, Simeng Zhang, Asuka Ishihara, Keigo Takahashi, Junichi Shoda, Yoshiharu Nabekura, Makoto Satoh, and Kumpei Tokuyama
- Abstract
Mammals have circadian clocks, which consist of the central clock in the suprachiasmatic nucleus and the peripheral clocks in the peripheral tissues. The effect of exercise on phase of peripheral clocks have been reported in rodents but not in humans. Continuous sampling is necessary to assess the phase of the circadian rhythm of peripheral clock gene expressions. It has been assumed that the expression of the genes in leukocyte may be “an accessible window to the multiorgan transcriptome.” The present study aimed to examine whether exercise affects the level and phase of clock gene expression in human leukocytes. Eleven young men participated in three trials, in which they performed a single bout of exercise at 60% V̇o
2max for 1 h beginning either at 0700 (morning exercise) or 1600 (afternoon exercise) or no exercise (control). Blood samples were collected at 0600, 0900, 1200, 1500, 1800, 2100, and 2300 and at 0600 the next morning, to assess diurnal changes of clock gene expression in leukocytes. Brain and muscle ARNT-like protein 1 (Bmal1) expression level increased after morning and afternoon exercise, and Cryptochrome 1 (Cry1) expression level increased after morning exercise. Compared with control trial, acrophase of Bmal1 expression tended to be earlier in morning exercise trial and later in afternoon exercise trial. Acrophase of Cry1 expression was earlier in morning exercise trial but not affected by afternoon exercise. Circadian locomotor output cycles kaput (Clock), Period 1–3 (Per1–3), and Cry2 expression levels and those acrophases were not affected by exercise. The present results suggest a potential role of a single bout of exercise to modify peripheral clocks in humans. NEW & NOTEWORTHY The present study showed that a single bout of exercise affected peripheral clock gene expression in human leukocytes and the effect of exercise depended on when it was performed. Brain and muscle ARNT-like protein 1 (Bmal1) expression was increased after exercises performed in the morning and afternoon. Cryptochrome 1 (Cry1) expression was also increased after the morning exercise. The effect of exercise on acrophase of Bmal1 depended on the time of the exercise: advanced after morning exercise and delayed after afternoon exercise. [ABSTRACT FROM AUTHOR]- Published
- 2020
- Full Text
- View/download PDF
43. Bevacizumab increases the sensitivity of olaparib to homologous recombination-proficient ovarian cancer by suppressing CRY1 via PI3K/AKT pathway.
- Author
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Iida Y, Yanaihara N, Yoshino Y, Saito M, Saito R, Tabata J, Kawabata A, Takenaka M, Chiba N, and Okamoto A
- Abstract
PARP inhibitors have changed the management of advanced high-grade epithelial ovarian cancer (EOC), especially homologous recombinant (HR)-deficient advanced high-grade EOC. However, the effect of PARP inhibitors on HR-proficient (HRP) EOC is limited. Thus, new therapeutic strategy for HRP EOC is desired. In recent clinical study, the combination of PARP inhibitors with anti-angiogenic agents improved therapeutic efficacy, even in HRP cases. These data suggested that anti-angiogenic agents might potentiate the response to PARP inhibitors in EOC cells. Here, we demonstrated that anti-angiogenic agents, bevacizumab and cediranib, increased the sensitivity of olaparib in HRP EOC cells by suppressing HR activity. Most of the γ-H2AX foci were co-localized with RAD51 foci in control cells. However, most of the RAD51 were decreased in the bevacizumab-treated cells. RNA sequencing showed that bevacizumab decreased the expression of CRY1 under DNA damage stress. CRY1 is one of the transcriptional coregulators associated with circadian rhythm and has recently been reported to regulate the expression of genes required for HR in cancer cells. We found that the anti-angiogenic agents suppressed the increase of CRY1 expression by inhibiting VEGF/VEGFR/PI3K pathway. The suppression of CRY1 expression resulted in decrease of HR activity. In addition, CRY1 inhibition also sensitized EOC cells to olaparib. These data suggested that anti-angiogenic agents and CRY1 inhibitors will be the promising candidate in the combination therapy with PARP inhibitors in HR-proficient EOC., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 Iida, Yanaihara, Yoshino, Saito, Saito, Tabata, Kawabata, Takenaka, Chiba and Okamoto.)
- Published
- 2024
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44. Physiological Stress Response by Selective Autophagy.
- Author
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Sánchez-Martín, Pablo and Komatsu, Masaaki
- Subjects
- *
PHYSIOLOGICAL stress , *PROTEOLYSIS , *ORGANELLES , *LIPID metabolism , *NUCLEAR receptors (Biochemistry) , *IMMUNE response , *STARVATION - Abstract
Cells are constantly challenged by endogenous and exogenous stress sources. To cope with them, organisms have developed a series of defensive mechanisms to prevent and intercept the threats and to repair the generated damage. Autophagy, once defined as a waste-disposal or non-specific degradative pathway, has arisen as a new organizer of the different physiological stress responses. In the present review, we will discuss how autophagy is capable of orchestrate these pathways by the specific degradation of individual autophagosomal LC3/GABARAP-binding proteins, rather than the bulk degradation of harmful products or organelles. Unlabelled Image • Autophagy regulates multiple physiological stress responses by the selective degradation of LC3/GABARAP-binding proteins. • The autophagy receptor p62/SQSTM1 induces the NRF2 antioxidant pathway through the degradation of KEAP1. • Degradation of the nuclear receptor co-repressor 1, NCoR1, during starvation regulates lipid metabolism. • Autophagy synchronizes the circadian cycle by the degradation of CRY1. • TRIM5α is an LC3-binding protein that coordinates the immune response and the autophagic degradation of retroviral particles. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
45. Sex-Dependent Regulation of Estrogen Receptor ß in Human Colorectal Cancer Tissue and its Relationship With Clock Genes and VEGF-A Expression.
- Author
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HERICHOVA, I., REIS, R., HASAKOVA, K., VICIAN, M., and ZEMAN, M.
- Subjects
CLOCK genes ,ESTROGEN ,VASCULAR endothelial growth factors ,COLORECTAL cancer ,ESTROGEN regulation ,ESTROGEN receptors ,TUMOR classification - Abstract
The incidence of colorectal cancer (CRC) shows a sex-dependent difference in humans. The aim of this study was to analyze estrogen receptor ß mRNA (ERß) expression in patients with CRC with respect to their gender and clinicopathological features. Since cancer progression is accompanied by tumor vascularization, VEGF-A (vascular endothelial growth factor A) transcription was analyzed along with ERß mRNA. ERß mRNA was also correlated with the expression of clock genes, which are known to influence the cell cycle. ERß mRNA expression in females with CRC showed an inverse association with increasing tumor staging that was not observed in males. Lower levels of ERß mRNA were observed in females with a higher clinical stage compared with those with earlier-stage tumors. ERß mRNA expression showed a significant positive correlation with mRNA of clock genes period 2 and cryptochrome 2 in healthy but not in cancerous tissue in males. Expression of VEGF-A mRNA showed a negative correlation with ERß mRNA after splitting of the cohort according to gender and nodus involvement. We propose that gender differences in ERß mRNA expression in tumors during the early stages of CRC can partially explain the lower occurrence of CRC in females compared with males. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
46. Phosphorylation of CRY1 Serine 71 Alters Voluntary Activity but Not Circadian Rhythms In Vivo.
- Author
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Vaughan, Megan, Jordan, Sabine D., Duglan, Drew, Chan, Alanna B., Afetian, Megan, and Lamia, Katja A.
- Subjects
- *
CIRCADIAN rhythms , *SERINE , *SLEEP-wake cycle , *PHOSPHORYLATION , *METABOLITES , *PROTEIN kinases - Abstract
Circadian clocks allow organisms to anticipate repetitive changes in their environment such as food availability, temperature, and predation. While they most clearly manifest at the behavioral level, driving sleep-wake cycles, for example, they also provide critical temporal regulation at the level of individual tissues. Circadian clocks within organs act to ensure that each tissue is functioning in a coordinated manner to anticipate the needs of the organism as a whole but also allow for adaptation of organs to their local environment. One critical aspect of this environment is energy availability, which is communicated at the cellular level via changes in metabolites such as ATP, calcium, and NADH. AMP-activated protein kinase (AMPK) is both sensitive to fluctuations in secondary metabolites and capable of resetting the circadian clock via destabilization of the core clock components CRY and PER. Phosphorylation of serine 71 of CRY1 by AMPK destabilizes CRY1 by decreasing its interaction with binding partner PER2, thus enabling greater association with the SCF complex substrate adaptor FBXL3. Here, we describe a transgenic mouse harboring germline mutation of CRY1 serine 71 to alanine. Unexpectedly, this mutation does not affect the steady-state level of CRY1 protein in mouse livers or quadriceps. We also did not detect changes in either behavioral or molecular circadian rhythms, but female Cry1 S71A mice exhibit decreased voluntary locomotor activity compared with wild-type littermates. Together, these findings suggest that phosphorylation of CRY1 serine 71 is not required for the regulation of circadian rhythms under normal physiological conditions. However, it may be involved in responding to metabolic challenges or in other aspects of physiology that contribute to voluntary activity levels. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
47. Ultraviolet B radiation modifies circadian time in epidermal skin and in subcutaneous adipose tissue.
- Author
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Nikkola, Veera, Miettinen, Maija E., Karisola, Piia, Grönroos, Mari, Ylianttila, Lasse, Alenius, Harri, Snellman, Erna, and Partonen, Timo
- Subjects
- *
SKIN diseases , *ADIPOSE tissues , *ULTRAVIOLET radiation , *CELL proliferation , *GENE expression - Abstract
Summary: Background: Recent findings suggest that circadian time regulates cellular functions in the skin and may affect protection against ultraviolet radiation (UVR). It is not known, however, whether UVR through skin directly affects the expression of circadian genes. We investigated the effect of ultraviolet B (UVB) exposure on cryptochrome circadian clock 1 (CRY1), cryptochrome circadian clock 2 (CRY2), and circadian associated repressor of transcription (CIART) genes. Methods: Healthy volunteers (n = 12) were exposed to narrow‐band UVB radiation of four standard erythemal dose (SED). Epidermal/dermal and subcutaneous adipose tissue samples were obtained by punch biopsies from irradiated and non‐irradiated skin 10 cm away from the irradiated site 24 hours after UVB exposure. Gene expression of CRY1,CRY2, and CIART was measured using RT‐PCR (TaqMan). Results: Ultraviolet B radiation affected mRNA expression in the epidermal/dermal skin and in the subcutaneous adipose tissue. It down‐regulated expression of CRY2 gene in the epidermal/dermal skin, whereas it up‐regulated expression of CRY1 and CIART genes in the subcutaneous adipose tissue. Conclusion: We showed for the first time that UVB radiation affects expression of circadian genes in the subcutaneous adipose tissue. Further studies are warranted to understand the mechanisms in detail. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
48. Stop CRYing! Inhibition of cryptochrome function by small proteins
- Author
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Valdeko Kruusvee, Arendse Maria Toft, Blanche Aguida, Margaret Ahmad, and Stephan Wenkel
- Subjects
CRY1 ,Arabidopsis Proteins ,fungi ,Arabidopsis ,food and beverages ,DNA ,Biochemistry ,EVOLUTION ,Cryptochromes ,GENOME ,DOMAIN ,Flavins ,INACTIVATION ,BLUE-LIGHT SENSITIVITY ,TRANSCRIPTION ,MEDIATE ,Phylogeny - Abstract
Plants can detect the presence of light using specialised photoreceptor proteins. These photoreceptors measure the intensity of light, but they can also respond to different spectra of light and thus ‘see' different colours. Cryptochromes, which are also present in animals, are flavin-based photoreceptors that enable plants to detect blue and ultraviolet-A (UV-A) light. In Arabidopsis, there are two cryptochromes, CRYPTOCHROME 1 (CRY1) and CRYPTOCHROME 2 (CRY2) with known sensory roles. They function in various processes such as blue-light mediated inhibition of hypocotyl elongation, photoperiodic promotion of floral initiation, cotyledon expansion, anthocyanin production, and magnetoreception, to name a few. In the dark, the cryptochromes are in an inactive monomeric state and undergo photochemical and conformational change in response to illumination. This results in flavin reduction, oligomerisation, and the formation of the ‘cryptochrome complexome'. Mechanisms of cryptochrome activation and signalling have been extensively studied and found to be conserved across phylogenetic lines. In this review, we will therefore focus on a far lesser-known mechanism of regulation that is unique to plant cryptochromes. This involves inhibition of cryptochrome activity by small proteins that prevent its dimerisation in response to light. The resulting inhibition of function cause profound alterations in economically important traits such as plant growth, flowering, and fruit production. This review will describe the known mechanisms of cryptochrome activation and signalling in the context of their modulation by these endogenous and artificial small inhibitor proteins. Promising new applications for biotechnological and agricultural applications will be discussed.
- Published
- 2022
- Full Text
- View/download PDF
49. Knocking down clock control gene CRY1 decreases adipogenesis via canonical Wnt/β-catenin signaling pathway.
- Author
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Sun, Shiwei, Zhou, Lei, Yu, Yueming, Zhang, Tieqi, and Wang, Minghai
- Subjects
- *
ADIPOGENESIS , *FAT cells , *CRYPTOCHROMES , *WNT signal transduction , *CATENINS , *LIPID metabolism - Abstract
Abstract Cryptochrome gene 1(CRY1) is a member of circadian clock genes, which play an important role in adipocyte biology. CRY1 was reported to be related with the lipid metabolism, but the molecule mechanism of CRY1 in regulating the adipogenesis remains unclear. Here we report that CRY1 is a key regulator in adipogenic differentiation. We found that the expression levels of CRY1 in 3T3-L1 cells and C3H10T1/2 cells gradually increased during the process of adipogenic differentiation. Knockdown of endogenous CRY1 significantly inhibited the expression of adipogenic markers and lipid droplet formation in cells under adipogenic induction. In addition, knockdown of endogenous CRY1 promoted the expression and nuclear accumulation of β-catenin, the critical signal molecular in the canonical canonical Wnt signaling pathway, suggesting the regulation effect of CRY1 in adipogenesis was mediated by canonical Wnt/β-catenin signaling. Taken together, our study suggests that CRY1 regulates adipogenic differentiation through modulating the canonical Wnt/β-catenin signaling pathway. Highlights • Adipogenic differentiation induces CRY1 expression.. • Knockdown of CRY1 inhibits adipogenic differentiation and adipogenesis-specific gene expression. • Knockdown of CRY1 activates canonical Wnt/β-catenin signaling pathway. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
50. Cryptochrome 1 promotes osteogenic differentiation of human osteoblastic cells via Wnt/β-Catenin signaling.
- Author
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Zhou, Lei, Zhang, Tieqi, Sun, Shiwei, Yu, Yueming, and Wang, Minghai
- Subjects
- *
CRYPTOCHROMES , *OSTEOBLASTS , *CELL proliferation , *WESTERN immunoblotting , *BONE growth - Abstract
Abstract Aims The exact mechanism underlying osteoblast differentiation and proliferation remains to be further elucidated. The circadian clock has been universally acknowledged controls behavioral activities and biological process in mammals. Cryptochrome 1 (Cry1), one of the core circadian genes, is associated with bone metabolism. However, the exact role and potential mechanism of Cry1 in regulating osteogenesis are still unclear. Main methods Western blotting and qRT-PCR were applied to detect Cry1 expression levels, molecules in osteogenesis related signaling pathways and osteogenic transcriptional markers. The ALP staining and Alizarin red S staining were performed to weigh osteogenic state, while CCK8 assay was used to detect cell growth rates. Osteogenic capability of osteoblasts was determined using an ectopic bone formation assay. Key findings Cry1 was upregulated in the process of osteoblast differentiation, along with osteogenic transcriptional factors. Then, Cry1 upregulation and knockdown cell lines were established and we found Cry1 overexpression promoted osteogenesis and proliferation of osteoblasts both in vitro and in vivo. Besides, the canonical Wnt/β-Catenin signaling was increasingly activated by Cry1 overexpression, whereas inhibition of β-Catenin restrained enhanced osteogenic capability of Cry1 upregulated osteoblasts. Significance In conclusion, these results suggest that Cry1 promotes osteogenic differentiation of human osteoblasts through the canonical Wnt/β-Catenin signaling. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
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