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Knowledge of the magnitude of gene effects and their interactions, their nature, and contribution to determining quantitative traits is very important in conducting an effective breeding program. In traditional breeding, information on the parameter related to additive gene effect and additive-additive interaction (epistasis) and higher-order additive interactions would be useful. Although commonly overlooked in studies, higher-order interactions have a significant impact on phenotypic traits. Failure to account for the effect of triplet interactions in quantitative genetics can significantly underestimate additive QTL effects. Understanding the genetic architecture of quantitative traits is a major challenge in the post-genomic era, especially for quantitative trait locus (QTL) effects, QTL–QTL interactions, and QTL–QTL–QTL interactions. This paper proposes using weighted multiple linear regression to estimate the effects of triple interaction (additive–additive–additive) quantitative trait loci (QTL–QTL–QTL). The material for the study consisted of 126 doubled haploid lines of winter wheat (Mandub × Begra cross). The lines were analyzed for 18 traits, including percentage of necrosis leaf area, percentage of leaf area covered by pycnidia, heading data, and height. The number of genes (the number of effective factors) was lower than the number of QTLs for nine traits, higher for four traits and equal for five traits. The number of triples for unweighted regression ranged from 0 to 9, while for weighted regression, it ranged from 0 to 13. The total aaagu effect ranged from − 14.74 to 15.61, while aaagw ranged from − 23.39 to 21.65. The number of detected threes using weighted regression was higher for two traits and lower for four traits. Forty-nine statistically significant threes of the additive-by-additive-by-additive interaction effects were observed. The QTL most frequently occurring in threes was 4407404 (9 times). The use of weighted regression improved (in absolute value) the assessment of QTL–QTL–QTL interaction effects compared to the assessment based on unweighted regression. The coefficients of determination for the weighted regression model were higher, ranging from 0.8 to 15.5%, than for the unweighted regression. Based on the results, it can be concluded that the QTL–QTL–QTL triple interaction had a significant effect on the expression of quantitative traits. The use of weighted multiple linear regression proved to be a useful statistical tool for estimating additive-additive-additive (aaa) interaction effects. The weighted regression also provided results closer to phenotypic evaluations than estimator values obtained using unweighted regression, which is closer to the true values. [ABSTRACT FROM AUTHOR]

Excessive oxidative stress and inflammatory responses are associated with the development of various diseases, including cancer. Glucosinolates (GSLs) are phytochemicals known for their antioxidant properties, and doubled haploid lines (DHLs) of Brassica rapa with high GSL contents (HGSL) were intentionally developed from two edible subspecies of Brassica rapa: B. rapa subsp. trilocularis and B. rapa subsp. chinensis. The purpose of the present study is to assess the capacity of HGSL DHLs to mitigate oxidative stress and inflammation in lipopolysaccharide (LPS)-stimulated RAW264.7 cells, compared to pak choi as a parental control. Our findings demonstrate that HGSL DH lines effectively suppressed the expression of inducible nitric oxide synthase, leading to the reduced levels of nitric oxide at non-toxic concentrations. Additionally, these lines exhibited scavenging activity against reactive oxygen species and free radicals. The enhanced antioxidant capacity of HGSL DHLs was mechanistically attributed to the upregulation of antioxidant enzymes, such as NADPH quinone oxidoreductase 1 (NQO1), the glutamate–cysteine ligase catalytic subunit (GCLC), and heme oxygenase-1 (HMOX1). Furthermore, we confirmed that these effects were mediated through the nuclear factor erythroid 2-related factor 2 (NRF2) signaling pathway via p38 phosphorylation. Moreover, HGSL DHLs demonstrated inhibitory effects on pro-inflammatory cytokines and signal transducers and activators of transcription 3 (STAT3) phosphorylation. Collectively, our results indicate that HGSL DHLs possess better antioxidant and anti-inflammatory properties compared to the parental control pak choi in LPS-stimulated RAW264.7 cells, suggesting that HGSL DHLs of Brassica rapa could be considered as a beneficial daily vegetable for reducing the risk of inflammation-associated diseases. [ABSTRACT FROM AUTHOR]

One of the biotic constraints in rice production worldwide is blast disease which can control by planting resistant varieties. To find out effective resistance, blast resistance quantitative trait loci (QTL) were mapped against 20 and 3 virulent isolates for leaf blast and neck blast, respectively, using 111 doubled haploid lines from the cross of IR64 and Azucena. QTLs associated with leaf blast were found on chromosomes 1, 2, 4, 7, 8, 10, 11, and 12 (%R2 = 3.6 – 64.3), while neck blast linked QTLs were identified on chromosomes 1, 6, 10, and 12 (%R2 = 6.4 – 22.6). The new QTLs were identified on chromosome 1; however, most QTLs were mapped in the vicinity of resistance genes in previous references. The genetic relationship of leaf and neck blast was explained by the coincidence of detected QTLs and positive value of pathogenicity correlation (r = 4.5 – 4.7). This study provides reliable QTLs locations that will benefit rice breeding programs to develop new cultivars containing durable and broad-spectrum resistance to leaf and neck blast disease. [ABSTRACT FROM AUTHOR]

This paper proposes the use of weighted multiple linear regression to estimate the triple3interaction (additive×additive×additive) of quantitative trait loci (QTLs) effects. The use of unweighted regression yielded an improvement (in absolute value) in the QTL×QTL×QTL interaction effects compared to assessment based on phenotypes alone in three cases (severe drought in 2010, control in 2012 and severe drought in 2012). In contrast, weighted regression yielded an improvement (in absolute value) in the evaluation of the aaagw parameter compared to aaap in five cases, with the exception of severe drought in 2012. The results show that by using weighted regression on marker observations, the obtained estimates are closer to the ones obtained by the phenotypic method. The coefficients of determination for the weighted regression model were significantly higher than for the unweighted regression and ranged from 46.2% (control in 2010) to 95.0% (control in 2011). Considering this, it is clear that a three-way interaction had a significant effect on the expression of quantitative traits. [ABSTRACT FROM AUTHOR]

Curly kale (Brassica oleracea L. convar. acephala var. sabellica), the most common type of edible kale, characterized by providing rich nutrition and health care functions, is sought after and has been listed as top of the healthiest vegetables in recent trends, and has aroused the interest of breeders in cultivating new varieties. However, it usually takes more than six years to obtain a homozygous kale inbred line for commercial seed production through conventional breeding procedures due to its long growth and development period. The isolated microspore culture (IMC) technique could be a time-saving alternative method for producing doubled haploid (DH) lines that are genetically homozygous. In this study, we successfully utilize the efficient cytokinin thidiazuron (TDZ) to promote microspore embryogenesis and plant regeneration in two curly kale cultivars ('Winterbor F2' and 'Starbor F2'). Compared with the control (0 mg/L TDZ), all tested TDZ concentrations (0.1, 0.2, 0.3, 0.4 mg/L) had no adverse effects on embryogenesis, and 0.2 mg/L TDZ had an optimal effect on embryo survival and plant regeneration of the two genotypes. For 'Starbor F2', 0.2 mg/L TDZ treatment achieved the highest embryogenesis rate (1.83-fold higher than the control group) and direct seeding rate (1.61-fold increase), and the lowest mortality rate. Likewise, 0.2 mg/L TDZ increased the embryogenesis rate of 'Winterbor F2' by 1.62 times, the direct seeding rate by 1.61 times, and the mortality rate fell to the lowest. A 1/2 Murashige and Skoog (MS) medium with 0.2 mg/L 1-Naphthaleneacetic acid (NAA) can significantly promote the rooting of the regenerated seedlings. These results provide new insights into the practical application of the IMC technique in shortening the breeding cycle of kale. [ABSTRACT FROM AUTHOR]

Isolated microspore culture has been implemented in breeding programs to produce doubled haploid (DH) lines and thus accelerates the breeding process. However, low microspore embryogenesis frequency in flowering Chinese cabbage remains a key obstacle to the practical application of this technique. This study aimed to establish an efficient microspore culture protocol for flowering Chinese cabbage that would be applied for heterosis breeding. Microspores of five genotypes, 19AY05, 19AY06, 19AY10, 19AY12, and 19AY15, were successfully induced to produce embryos in NLN-13 medium. Microspores of two genotypes, 19AY05 and 19AY15, were cultivated in NLN-13 medium supplemented with different concentrations (0, 0.01, 0.05, 0.1, or 0.2 mg·L−1) of compound sodium nitrophenol (sodium nitrophenol, 5-nitrophenol) to enhance microspore embryogenesis and plant regeneration without an intervening callus phase. The results showed that 0.05 ~ 0.1 mg· L−1 sodium nitrophenol and 0.01 ~ 0.2 mg· L−1 of 5-nitrophenol significantly promoted the induction of microspore embryogenesis of two genotypes, and the best concentrations required for different genotypes are different. Moreover, 0.1 mg· L−1 sodium nitrophenol can significantly increase the plant regeneration rate of the two genetypes. The 5-nitrophenol at 0.01 mg·L−1 significantly increased rate of embryos directly convert to plant in 19AY15. In addition, the average doubled haploid rates in the five genotypes were close to 63%. Horticultural traits of DH lines from 19AY05 were identified and all of them were self-incompatible lines. They showed a high uniformity and consistency that can be directly used for hybrid breeding. Furthermore, the hybrid combination was prepared with the selected DH lines and the Guangdong nucleus genic sterile line GMS019 to screen the excellent hybrid combination for the flowering Chinese cabbage breeding program. This method accelerates the application of microspore culture in hybrid breeding of flowering Chinese cabbage. [ABSTRACT FROM AUTHOR]

Chemoprevention is a method of health control in modern industrialized societies. Traditional breeding (hybridization) has been widely used to produce new (sub)species with beneficial phenotypes. Previously, we produced a number of doubled haploid (DH) lines of Brassica rapa with a high glucosinolate (GSL) content. In this study, we evaluated the anticancer activities of extracts from three selected high-GSL (HGSL)-containing DH lines (DHLs) of Brassica rapa in human colorectal cancer (CRC) cells. The three HGSL DHL extracts showed anti-proliferative activities in the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium assay and pro-apoptotic activities in the cell cycle or annexin V analysis with the induction of pro-apoptotic protein expression in CRC cells. Mechanistically, HGSL DHL extracts inhibited the NF-κB and ERK pathways, leading to a reduction in the nuclear localization of NF-κB p65. In addition, reactive oxygen species were induced by HGSL DHL extract treatment in CRC cells. In conclusion, our data suggest that the newly developed HGSL DHLs possess enhanced anticancer activities and are potentially helpful as a daily vegetable supplement with chemopreventive activities. [ABSTRACT FROM AUTHOR]

Excessive oxidative stress and inflammatory responses are associated with the development of various diseases, including cancer. Glucosinolates (GSLs) are phytochemicals known for their antioxidant properties, and doubled haploid lines (DHLs) of Brassica rapa with high GSL contents (HGSL) were intentionally developed from two edible subspecies of Brassica rapa: B. rapa subsp. trilocularis and B. rapa subsp. chinensis. The purpose of the present study is to assess the capacity of HGSL DHLs to mitigate oxidative stress and inflammation in lipopolysaccharide (LPS)-stimulated RAW264.7 cells, compared to pak choi as a parental control. Our findings demonstrate that HGSL DH lines effectively suppressed the expression of inducible nitric oxide synthase, leading to the reduced levels of nitric oxide at non-toxic concentrations. Additionally, these lines exhibited scavenging activity against reactive oxygen species and free radicals. The enhanced antioxidant capacity of HGSL DHLs was mechanistically attributed to the upregulation of antioxidant enzymes, such as NADPH quinone oxidoreductase 1 (NQO1), the glutamate–cysteine ligase catalytic subunit (GCLC), and heme oxygenase-1 (HMOX1). Furthermore, we confirmed that these effects were mediated through the nuclear factor erythroid 2-related factor 2 (NRF2) signaling pathway via p38 phosphorylation. Moreover, HGSL DHLs demonstrated inhibitory effects on pro-inflammatory cytokines and signal transducers and activators of transcription 3 (STAT3) phosphorylation. Collectively, our results indicate that HGSL DHLs possess better antioxidant and anti-inflammatory properties compared to the parental control pak choi in LPS-stimulated RAW264.7 cells, suggesting that HGSL DHLs of Brassica rapa could be considered as a beneficial daily vegetable for reducing the risk of inflammation-associated diseases.

In cereals, resistance and tolerance to salinity are qualities that allow their cultivation in arid and semi-arid regions. Hence, we sought to select salt stress-resistant barley genotypes by applying sub-lethal NaCl concentrations and observing their effect on germination. This work was carried out using parent spring barley genotype (Hordeum vulagre L.) namely Tamelalt, and its doubled haploids progeny. Salt stress resistance was tested on seeds germination in Petri dishes provided with filter paper containing increasing concentrations of salt (0, 5, 10, and 15 g.L-1) for 10 days at 25°C. The doubled haploids progeny derived from Tamelalt showed to be the most tolerant to salt stress with a germination rate under the most severe salt stress conditions (NaCl 15 g.L-1), while the parent genotype Tamelalt was the least tolerant with a germination rate of only 26.67% under the same stress. Principal component analysis and hierarchical cluster analysis allowed the separation of DH lines and parent genotype. Two groups were identified. The DH lines were completely different from the parent genotype. [ABSTRACT FROM AUTHOR]

The most important applications of genomic selection (GS) in maize breeding is to predict and identify the best untested lines from biparental populations, when the training and validation sets are derived from the same cross. A total of 300 hybrids were generated using doubled haploid lines crossed to single known tester. The test hybrids and checks were evaluated for drought tolerance, grain yield and yield attributes under well‐watered (WW) and water stress at flowering (WSF) conditions during rabi 2018 at Hyderabad and Aurangabad locations. The study was further deep dived and practiced GS using 3352 single‐nucleotide polymorphism (SNP) markers. An extension of the genomic best linear unbiassed predictor that incorporates genotype × environment (GE) interaction was used to predict genotypic values; cross‐validation methods were applied to quantify prediction accuracy. Our results showed that the highest cross‐validation prediction accuracy for grain yield was 0.47 under WSF condition in TPS3, whereas under WW condition, prediction accuracy was 0.44 in TPS2, which is statistically on par with WSF condition. Among the secondary traits, the peak GS accuracies recorded for the traits anthesis silking interval (0.52) and ears per plant (0.48) under WSF. Under both the water regimes, anthesis silking interval and plant height recorded higher prediction accuracy when compared with grain yield. Hence, GS could be practiced for anthesis silking interval and ears per plant under stress condition in maize. Further while optimizing the population size, it was revealed from the study that increasing size of the population increases GS accuracy and TPS2 considered as optimum size of population for GS prediction. [ABSTRACT FROM AUTHOR]

Camelina (Camelina sativa (L.) Crantz), an oilseed crop, belongs to the Brassicaceae family. Two unique features of camelina in comparison with the main oil crops are an adaptation to different environments and also its unique oil composition. The development of doubled haploid plants is one of the essential methods for crop improvement. The study of genetic diversity is an important step in planning crop breeding programmes. This research was conducted to evaluate the genetic variation of 81 camelina doubled haploid lines obtained from 15 crosses by inter simple sequence repeat (ISSR) markers. The total number of amplified bands was 243, of which 239 bands (98.3%) showed polymorphism. The percentage of polymorphic bands varied between 93.75 and 100. The size of the bands ranged from 50 to 1700 base pairs. The informative ISSRs were identified by estimating marker features: polymorphism information content, effective multiplex ratio, marker index and resolving power. Three markers had higher resolving power values (9.88, 8.5 and 7.46) and were the most informative markers to identify the lines. Cluster analysis based on the complete algorithm divided the lines into five groups, indicating relatively clear configuration from the geographic distribution patterns of the parents of the doubled haploid lines. Principal coordinate analysis classified the 81 camelina doubled haploid lines into six groups. The ISSR markers detected high polymorphism to reveal the genetic variation of camelina lines. The findings of this research, along with the characterization of biochemical traits of the lines, can improve breeding programmes achieve high-yielding camelina varieties with higher and better oil content. [ABSTRACT FROM AUTHOR]

• Purple cauliflower had lower microspore embryogenesis than white and orange cauliflower. • Dicamba (0.5 µmol·L-1) enhanced microspore embryogenesis & plantlet regeneration in purple cauliflower. • The deep purple cauliflower DHP03 was superior to the donor plant in nutrient content. Cauliflower (Brassica oleracea var. botrytis L.) is an important vegetable grown worldwide. Colored cauliflower is highly desirable because of its aesthetic appearance and nutritional benefits. The use of isolated microspore culture technology to obtain doubled haploid (DH) lines could expedite breeding. However, the low frequency of microspore embryogenesis, particularly in colored cauliflowers, remains a major hurdle for the practical application of this technique. In this study, nine genotypes of cauliflower microspores were successfully induced among the 15 differently colored genotypes. The addition of 0.5 µmol·L−1 dicamba to NLN-13 medium increased the number of embryos per bud in purple cauliflower genotypes 20WY06, 20WY08, and 20WY10. The number of embryos was 4.64-, 5.45-, and 4.03-folds higher than that of the control, respectively. Meanwhile, 0.5 µmol·L−1 dicamba effectively promoted plantlet regeneration. The spontaneous diploidization rates of the purple cauliflower ranged from 52.63% to 54.76%, suggesting potential applicability in breeding without artificial doubling. A total of 76 purple cauliflower DH lines were generated. One DH line identified, DHP03, with high vitamin C and anthocyanin could be further applied to purple cauliflower breeding. This is the first study to utilize dicamba in improving the rate of microspore embryogenesis and plantlet regeneration, supply the DH lines in hybrid seeds, and shorten the breeding cycle of purple cauliflower. [ABSTRACT FROM AUTHOR]

Single nucleotide polymorphism (SNP) arrays, also named « SNP chips », enable very large numbers of individuals to be genotyped at a targeted set of thousands of genome-wide identified markers. We used preexisting variant datasets from USDA, a French commercial line and 30X-coverage whole genome sequencing of INRAE isogenic lines to develop an Affymetrix 665 K SNP array (HD chip) for rainbow trout. In total, we identified 32,372,492 SNPs that were polymorphic in the USDA or INRAE databases. A subset of identified SNPs were selected for inclusion on the chip, prioritizing SNPs whose flanking sequence uniquely aligned to the Swanson reference genome, with homogenous repartition over the genome and the highest Minimum Allele Frequency in both USDA and French databases. Of the 664,531 SNPs which passed the Affymetrix quality filters and were manufactured on the HD chip, 65.3% and 60.9% passed filtering metrics and were polymorphic in two other distinct French commercial populations in which, respectively, 288 and 175 sampled fish were genotyped. Only 576,118 SNPs mapped uniquely on both Swanson and Arlee reference genomes, and 12,071 SNPs did not map at all on the Arlee reference genome. Among those 576,118 SNPs, 38,948 SNPs were kept from the commercially available medium-density 57 K SNP chip. We demonstrate the utility of the HD chip by describing the high rates of linkage disequilibrium at 2–10 kb in the rainbow trout genome in comparison to the linkage disequilibrium observed at 50–100 kb which are usual distances between markers of the medium-density chip. [ABSTRACT FROM AUTHOR]

Relevance. Broccoli cabbage (Brassica oleracea L. convar. botrytis (L.) Alef. var. cymosa Duch.) is widely spread around the world due to its dietetic attribute, preventive and healing effect, cooking simplicity. F1 hybrids production is the main stream in modern crop breeding as they surpass varieties in evenness and yield quality. However, it takes up to 6 years of inbreeding to obtain pure parent lines capable for hybrid creation. Thus biotechnological methods, especially doubled haploids production technology shell be implemented in selection process. 100% homozygous line can be worked out in one generation by this technology. Nevertheless earlier researches revealed such plants low seed set that hinder their application in mass production. Therefore after pollination seed set level identification is an important step in applying lines gained via in vitro process.Materials and methods. Broccoli cabbage regenerated plants produced by isolated microspore in vitro culture method were used as raw material in our study. Flower and bud pollination was held in climate cells.Results. Study of 11 broccoli cabbage DH-lines disclosed genotype influence the ability to set seeds after bud pollination. 93.3% genotype A and 95.5% A1.3 pods were seedless in our experiments. Most genotypes demonstrated 50.3-85.7% seed set level. Low and middle ability to form seeds prevailed mainly. This peculiarity should be considered while dealing with regenerated plants by raising the number of crossings for successful breeding.

This paper proposes the use of weighted multiple linear regression to estimate the triple3interaction (additive×additive×additive) of quantitative trait loci (QTLs) effects. The use of unweighted regression yielded an improvement (in absolute value) in the QTL×QTL×QTL interaction effects compared to assessment based on phenotypes alone in three cases (severe drought in 2010, control in 2012 and severe drought in 2012). In contrast, weighted regression yielded an improvement (in absolute value) in the evaluation of the aaagw parameter compared to aaap in five cases, with the exception of severe drought in 2012. The results show that by using weighted regression on marker observations, the obtained estimates are closer to the ones obtained by the phenotypic method. The coefficients of determination for the weighted regression model were significantly higher than for the unweighted regression and ranged from 46.2% (control in 2010) to 95.0% (control in 2011). Considering this, it is clear that a three-way interaction had a significant effect on the expression of quantitative traits.

Curly kale (Brassica oleracea L. convar. acephala var. sabellica), the most common type of edible kale, characterized by providing rich nutrition and health care functions, is sought after and has been listed as top of the healthiest vegetables in recent trends, and has aroused the interest of breeders in cultivating new varieties. However, it usually takes more than six years to obtain a homozygous kale inbred line for commercial seed production through conventional breeding procedures due to its long growth and development period. The isolated microspore culture (IMC) technique could be a time-saving alternative method for producing doubled haploid (DH) lines that are genetically homozygous. In this study, we successfully utilize the efficient cytokinin thidiazuron (TDZ) to promote microspore embryogenesis and plant regeneration in two curly kale cultivars (‘Winterbor F2’ and ‘Starbor F2’). Compared with the control (0 mg/L TDZ), all tested TDZ concentrations (0.1, 0.2, 0.3, 0.4 mg/L) had no adverse effects on embryogenesis, and 0.2 mg/L TDZ had an optimal effect on embryo survival and plant regeneration of the two genotypes. For ‘Starbor F2’, 0.2 mg/L TDZ treatment achieved the highest embryogenesis rate (1.83-fold higher than the control group) and direct seeding rate (1.61-fold increase), and the lowest mortality rate. Likewise, 0.2 mg/L TDZ increased the embryogenesis rate of ‘Winterbor F2’ by 1.62 times, the direct seeding rate by 1.61 times, and the mortality rate fell to the lowest. A 1/2 Murashige and Skoog (MS) medium with 0.2 mg/L 1-Naphthaleneacetic acid (NAA) can significantly promote the rooting of the regenerated seedlings. These results provide new insights into the practical application of the IMC technique in shortening the breeding cycle of kale.

Chemoprevention is a method of health control in modern industrialized societies. Traditional breeding (hybridization) has been widely used to produce new (sub)species with beneficial phenotypes. Previously, we produced a number of doubled haploid (DH) lines of Brassica rapa with a high glucosinolate (GSL) content. In this study, we evaluated the anticancer activities of extracts from three selected high-GSL (HGSL)-containing DH lines (DHLs) of Brassica rapa in human colorectal cancer (CRC) cells. The three HGSL DHL extracts showed anti-proliferative activities in the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium assay and pro-apoptotic activities in the cell cycle or annexin V analysis with the induction of pro-apoptotic protein expression in CRC cells. Mechanistically, HGSL DHL extracts inhibited the NF-κB and ERK pathways, leading to a reduction in the nuclear localization of NF-κB p65. In addition, reactive oxygen species were induced by HGSL DHL extract treatment in CRC cells. In conclusion, our data suggest that the newly developed HGSL DHLs possess enhanced anticancer activities and are potentially helpful as a daily vegetable supplement with chemopreventive activities.

Relevance One of the basic directions of the cabbage crop breeding is the creation of F1 hybrids with a complex of economically valuable traits. This process is difficult and time-consuming as to get pure lines must be within 6-12 years hold inbreeding. Herewith not every line gives the desired heterotic effect that also requires additional verification. Methods Biotechnological method culture of isolated microspores in vitro, which allows in the first generation to receive a line with 100% homozygosity, was used to speed up the breeding process. Combination ability were performed in complete diallel cross on the basic morphological signs. Results Culture medium for cultivation of isolated microspores in vitro was optimized for each genotype of cabbage for the best embryoids regeneration. Maximum amount of embryoids was received on medium with pH 6.2 using ampicillin 100 mg/l and zeatin 1 mg/l: 466.7 ± 153.2 PCs/100 buds. A new source material for breeding – doubled haploid lines of cabbage was received. Lines – the best parents for F1 hybrids with high yield, compact rosette of leaves, with optimum inside and short outside cabbage stump was created. Studies have shown that optimization of breeding process in case of creation of pure lines of cabbage in 3 years with microspore culture requires to reduce the breeding process in 2 times.

Monoecy and parthenogenesis exist in certain male and female gametophytes of the brown alga Undaria pinnatifida. The inheritance of these traits is not known. In this study, we made a cross between a male and a female gametophyte clone which could exhibit monoecy and parthenogenesis phenotypes, respectively, and obtained their next‐generation gametophyte offspring. We found that under conditions suitable for gametogenesis, all of the male offspring (n = 100) exhibited monoecy phenotype and all of the female offspring (n = 100) only formed oogonia and underwent parthenogenesis, suggesting that monoecy and parthenogenesis phenotypes are inheritable. Then, we established a doubled haploid (DH) population through monoecious selfing and parthenogenesis, and evaluated the young sporophyte growth and the maximum quantum yield (Fv/Fm) of 10 "male" and 10 "female" DH lines. On day 60, the average length of the "male" DH lines was significantly larger than that of the "female" DH lines, while their average Fv/Fm values were not significantly different. Monoecious selfing seemed superior to parthenogenesis as the sporophyte formation efficiency, and the young sporophyte growth was better in the former than in the latter. We also crossed two monoecious gametophytes with another male gametophyte, and a parentage analysis showed success of obtaining hybrid sporophytes, indicating that the female gametes released by the monoecious gametophyte can actually be fertilized by sperm. The approach of establishing a DH population proposed here will be useful in genetic breeding and quantitative trait loci mapping in U. pinnatifida and may be applicable to other kelp species. [ABSTRACT FROM AUTHOR]

The in vivo haploid induction has been widely applied to the maize breeding in recent decades, but it has not been used in the breeding programs in the Republic of Croatia by now. This study's objectives were to examine the haploid induction rates in the Croatian germplasm and to evaluate the properties of the D0 haploids, which are essential for a successful implementation of this method in breeding. The in vivo haploid induction was performed on 11 single-cross hybrids using the Zarodyshevy Marker Krasnodarsky (ZMK) inducer, and colchicine was used as a chromosome doubling agent. Emergence, misclassification rate, colchicine treatment survival, chromosome doubling rate and self-pollination success were examined in the D0 generation. The haploid induction rates ranged from 6.9 to 15.8%, which is consistent with the average induction rates characteristic of the ZMK inducer and the other modern ones. Significant differences were found among the populations of D0 haploids for all tested properties, except for self-pollination success. On average, the misclassification rates were lower, and the seedling survival rates were higher than those reported in other studies, indicating a possibility of a successful application of the doubled haploid method in maize breeding.

Fusarium stalk rot disease (FSR) of maize caused by Fusarium verticillioides (Sacc.) Nirenberg is becoming an important biotic production constraint in many of the major maize growing areas causing substantial yield losses. Inbreds are preferred as parents in hybrid development owing to homozygous nature and high heterotic ability. Double haploid (DH) technology has emerged as a significant milestone. A total of 339 DH lines were generated from two inbred lines, VL1043 (susceptible) and CM212 (resistant), through in vivo haploid induction method. The 339 DH lines along with parents were phenotyped for their response to the FSR at the College of Agriculture, V. C. Farm, Mandya, India during summer, kharif and rabi seasons of the 2019–2020. Best linear unbiased predictors (BLUPs) were estimated for the FSR disease scores over three seasons. A wide range of BLUP scores of three to nine indicated the presence of higher variation for response of DH lines to FSR disease. The higher estimates of standardized range (1.31) and phenotypic coefficient of variation (19.80) also displayed higher variability. Nine lines were moderately resistant and 188 exhibited moderately susceptible reaction. The distribution of DH lines was positively skewed (1.34) and platykurtic (2.31) which suggested complementary epistasis and involvement of large number of genes in the disease expression. [ABSTRACT FROM AUTHOR]

The dynamics of changing climatic factors and the study of the impact they have on cultivated crops is an area that needs to be carefully and thoroughly researched in order to adequately address the future challenges of human nutrition. The present study concerned the influence of major environmental factors on some morphological and economic characteristics of sunflower (Helianthus annuus L.), which is a main oil crop in Bulgaria. Development and selection of parental lines with stabilized morphological and economic parameters is a main point of the heterosis breeding in sunflower. This study was carried out during 2009-2011 at Dobrudzha Agricultural Institute - General Toshevo. The three years of the investigation differed by the sum of vegetative rainfalls. The investigation involved 10 doubled haploid fertility restorer lines. The analysis of the results showed that the year conditions and the genotype of the investigated lines had a significant effect (p=0.001) on the studied morphological traits and on the oil content in seeds. The combined influence of these two factors was not significant on plant height and oil content. The head diameter was influenced to a much higher degree by the year conditions than the plant height. The oil content in seed was the trait with lowest variation during the period of investigation in comparison to the two morphological traits. The highest values of the morphological traits and the content of oil in seed were determined in the warm and humid year 2010. [ABSTRACT FROM AUTHOR]

As Brassicaceae species are mostly cross-pollinated, breeding homozygous parental lines by traditional approaches is time-consuming and costly. Alternatively, microspore culture has been widely applied to produce double haploid lines in a short time. This study aimed to establish a highly efficient microspore culture protocol for purple flowering stalk. Among the five genotypes studied, the highest and lowest embryo induction rates were observed in J18 and J17 (13.5 and 7.67 embryos per bud, respectively). Microspores of genotypes J17 and J18 were successfully induced to produce embryos in NLN-13 medium, but the frequency of microspore embryogenesis was low. Three non-ionic surfactants (Pluronic F-68, Triton X-100, Tween-20) were evaluated independently for their effect on microspore embryogenesis of purple flowering stalk. Microspores of the two genotypes were cultivated in NLN-13 medium supplemented with different concentrations (0.0001%, 0.001%, 0.01%, 0.1%, 0.5%, and 1% (w/v)) of the three non-ionic surfactants to enhance microspore embryogenesis and plant regeneration. In both genotypes, supplementation with any of the three non-ionic surfactants at 0.0001% significantly increased the frequency of microspore embryogenesis; furthermore, at that concentration, Tween-20 significantly increased the number of plants regenerated from induced embryoids by 29.9% and 30% in J17 and J18, respectively. Moreover, the rate of double haploid formation among regenerated plants of the five genotypes was above 60%, which allowed the creation of 93 double haploid lines. [ABSTRACT FROM AUTHOR]

Speckled snow mold caused by Typhula ishikariensis is one of the most devastating diseases of winter wheat in Hokkaido, Japan and parts of the Pacific Northwest region of USA. Münstertaler is a winter wheat landrace from Switzerland that has very high resistance to snow mold and superior freezing tolerance. Quantitative trait loci (QTL) for resistance to speckled snow mold were identified in a doubled haploid population derived from a cross between Münstertaler and susceptible variety Ibis, both under field conditions and controlled environment tests. Composite interval mapping analysis revealed a major QTL on chromosome 5D from Münstertaler, and on chromosome 6B from Ibis. Flanking microsatellite marker cfd 29 for the QTL on chromosome 5D was about 5 cM distant from vernalization requirement gene Vrn-D1, suggesting that the QTL on chromosome 5D is located on a cold-stress-related gene cluster along with Vrn-D1 and freezing tolerance gene Fr-D1. The QTL on chromosome 6B from Ibis was located on the centromere region flanking QTn.mst-6B, which is reported to increase plant tiller number. [ABSTRACT FROM AUTHOR]

To study the relationships of grain yield and some of agro-morphological traits in 40 doubled haploid (DH) lines along with parental and three check genotypes in a randomized complete block design with two replications under two water regimes (normal and stress) were evaluated during 2011-2012 and 2012-2013 growing seasons. Combined analysis of variance showed significant difference for all the traits in terms of the year, water regimes, lines, and and line × year. Comparison of group means, between non-stress and stress conditions, showed that DH lines had the lowest reduction percentage for the number of grains per spike, thousand grain weight, grain yield and biological yield as opposed to check genotypes. The correlation between grain yield with biological yield, harvest index, thousand grain weight, and hectoliter of kernel weight in both conditions, were highly significant and positive. Based on stepwise regression the peduncle length, number of seeds per spike, thousand seed weight, and hectoliter of kernel weight had important effect on increasing seed yield. The result of path analysis showed that these traits had the highest direct effect on grain yield. Based on mean comparisons of morphological characters as well as STI and GMP indices it can be concluded that lines No.11, 13, 14, 24, 29, 30, 35 and 39 were distinguished to be desirable lines for grain yield and their related traits and also tolerant lines in terms of response to drought stress conditions.

Yield improvement is an important target for rapeseed breeding. Resolving the genetic architecture of yield in Brassica napus, QTL analysis was carried out in a double haploid population derived from a cross between ZS11 and QU cultivars. A 60-K SNP chip was used to construct a genetic linkage map; a total of 5044 SNP markers were mapped to 19 linkage groups. QTLs of yield-related traits were mapped for seed density (SD), silique density on the main inflorescence (SDMI), thousand seed weight (TSW), and silique length (SL) in seven environments and 3 years experiments. Four major consensus QTLs of SD, TSW, and SL were identified in seven environments, explaining 48.06, 53.27, 37.13, and 52.13% of phenotypic variation, respectively. Two major consensus QTLs of SDMI were detected in six environments, explaining 13.32 and 11.76% of phenotypic variation, respectively. Notably, nine major consensus QTLs of SD, SDMI, TSW, and SL showed narrower confidence intervals (< 1 Mb). Moreover, two major pleiotropic QTLs controlling three traits (SD, TSW, and SL) simultaneously were identified, co-locating on 23.82–26.66 Mb, 27.06–28.53 Mb on chromosome A9 of B. napus, respectively. Most importantly, our research reveals the first (to our knowledge) pleiotropic QTLs, which controlled SD, TSW, and SL on chromosome A9 in B. napus. Furthermore, we found eight possible candidate genes might be related to SD, TSW, and SL, synchronously. Overall, these results lay a foundation for developing closely linked molecular markers, conducting fine mapping and gene cloning for yield-related traits in B. napus. [ABSTRACT FROM AUTHOR]

The objective of this study was to assess genotype by environment interaction for 1000-kernel weight in spring barley lines grown in South Poland by the additive main effects and multiplicative interaction model. The study comprised of 32 spring barley (Hordeum vulgare L.) genotypes (two parental genotypes—breeding line 1 N86 and doubled haploid (DH) line RK63/1, and 30 DH lines derived from F1 hybrids), evaluated at six locations in a randomized complete block design, with three replicates. 1000-kernel weight ranged from 24.35 g (for R63N/42 in 2011) to 61.46 g (for R63N/18 in 2008), with an average of 44.80 g. AMMI analyses revealed significant genotype and environmental effects as well as GE interaction with respect to 1000-kernel weight. In the analysis of variance, 16.86% of the total 1000-kernel weight variation was explained by environment, 32.18% by differences between genotypes, and 24.50% by GE interaction. The lines R63N/61, R63N/22, and R63N/1 are recommended for further inclusion in the breeding program because their stability and the highest averages of 1000-kernel weight. The total additive effect of all genes controlling the trait and the total epistasis effect of 1000-kernel weight were estimated. Additive gene action effects based on DH lines were always larger that this parameter estimated on the basis of parental lines. Estimates of additive gene action effects based on the all DH lines were significantly larger than zero in each year of study. Epistasis effects based on all DH lines were statistically significant in 2011 and 2013. [ABSTRACT FROM AUTHOR]

Highlights • Microspore culture is used for rapid development of doubled haploids. • Microspore culture protocol was developed for Zengcheng flowering Chinese cabbage. • Adding right VcNa concentrations to a medium improved microspore embryogenesis. • High-yield and self-incompatible DH lines were identified for breeding. Abstract Microspore culture has been implemented in breeding programs to produce doubled haploids (DH) and thus accelerate the breeding process. This study aimed to establish an efficient microspore culture protocol for Zengcheng flowering Chinese cabbage, a highly nutritious and valued vegetable, that would be suitable for heterosis breeding. Microspores of three genotypes, 17AY010, 17AY011, and 17AY012 were successfully induced to produce embryos in NLN-13 medium. Two genotypes, 17AY011 and 17AY012 were cultivated in NLN-13 medium supplemented with different concentrations (0, 0.2, 1, 5 or 25 μM) of L-ascorbic acid sodium salt (Vitamin C Sodium Salt, VcNa) to enhance microspore embryogenesis and plant regeneration without an intervening callus phase. In both genotypes, the addition of 1 μM and 0.2 μM VcNa significantly increased the frequency of embryogenesis, 6.55-fold and 10.33-fold as compared with the control, respectively. The optimum concentration of VcNa application that would improve the rates of direct plant regeneration in the two tested genotypes was 1 μM. Moreover, the doubled haploid rates of regenerated plants of the three genotypes were above 60%. Five DH lines of 17AY012 with high yield were obtained. According to the measurement of the affinity index, they were prospective self-incompatible lines for hybrid breeding. [ABSTRACT FROM AUTHOR]

Salinity majorly hinders horizontal and vertical expansion in worldwide wheat production. Productivity can be enhanced using salt-tolerant wheat genotypes. However, the assessment of salt tolerance potential in bread wheat doubled haploid lines (DHL) through agro-physiological traits and stress-related gene expression analysis could potentially minimize the cost of breeding programs and be a powerful way for the selection of the most salt-tolerant genotype. We used an extensive set of agro-physiologic parameters and salt-stress-related gene expressions. Multivariate analysis was used to detect phenotypic and genetic variations of wheat genotypes more closely under salinity stress, and we analyzed how these strategies effectively balance each other. Four doubled haploid lines (DHLs) and the check cultivar (Sakha93) were evaluated in two salinity levels (without and 150 mM NaCl) until harvest. The five genotypes showed reduced growth under 150 mM NaCl; however, the check cultivar (Sakha93) died at the beginning of the flowering stage. Salt stress induced reduction traits, except the canopy temperature and initial electrical conductivity, which was found in each of the five genotypes, with the greatest decline occurring in the check cultivar (Sakha-93) and the least decline in DHL2. The genotypes DHL21 and DHL5 exhibited increased expression rate of salt-stress-related genes (TaNHX1, TaHKT1, and TaCAT1) compared with DHL2 and Sakha93 under salt stress conditions. Principle component analysis detection of the first two components explains 70.78% of the overall variation of all traits (28 out of 32 traits). A multiple linear regression model and path coefficient analysis showed a coefficient of determination (R2) of 0.93. The models identified two interpretive variables, number of spikelets, and/or number of kernels, which can be unbiased traits for assessing wheat DHLs under salinity stress conditions, given their contribution and direct impact on the grain yield.

Salinity is a major obstacle to wheat production worldwide. Salt-affected soils could be used by improving salt-tolerant genotypes depending upon the genetic variation and salt stress response of adapted and donor wheat germplasm. We used a comprehensive set of morpho-physiological and biochemical parameters and simple sequence repeat (SSR) marker technique with multivariate analysis to accurately demonstrate the phenotypic and genetic variation of 18 wheat genotypes under salinity stress. All genotypes were evaluated without NaCl as a control and with 150 mM NaCl, until the onset of symptoms of death in the sensitive plant (after 43 days of salinity treatment). The results showed that the relative change of the genetic variation was high for all parameters, heritability (>60%), and genetic gain (>20%). Stepwise regression analysis, noting the importance of the root dry matter, relative turgidity, and their respective contributions to the shoot dry matter, indicated their relevance in improving and evaluating the salt-tolerant genotypes of breeding programs. The relative change of the genotypes in terms of the relative turgidity and shoot dry matter during salt stress was verified using clustering methods. For cluster analysis, the genotypes were classified into three groups: tolerant, intermediate, and sensitive, representing five, six, and seven genotypes, respectively. The morphological and genetic distances were significantly correlated based on the Mantel test. Of the 23 SSR markers that showed polymorphism, 17 were associated with almost all examined parameters. Therefore, based on the observed molecular marker-phenotypic trait association, the markers were highly useful in detecting tolerant and sensitive genotypes. Thus, it considers a helpful tool for salt tolerance through marker-assisted selection.

Copyright of Agriculture / Poljoprivreda is the property of Josip Juraj Strossmayer University of Osijek, Faculty of Agriculture in Osijek and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Anther culture can be used to accelerate plant breeding program in producing superior variety of rice. The aims of this research were to determine agronomic performance and yield of doubled haploid (DH) lines of lowland rice and select the best genotypes for multilocation yield trials. The research was conducted in Indonesia at three locations, i.e. Subang (West Java), Cianjur (West Java) and Malang (East Java) using a randomized complete block design. It consisted of 35 genotypes and three check varieties (Ciherang, Inpari 13 and Inpara 5) as treatments. The treatments were repeated 3 times. The results showed that interaction of genotype and environment was significant on all traits. Genotypic variance and heritability estimates of all traits were in the high category and ranged between 1.57 - 458.51 and 0.58 - 0.96, except for tiller number and the productivity which were moderate. Fourteen DH lines were selected based on yield and selection index, which takes, into account a combination of traits, i.e. tiller number, filled grain per panicle, percentage of filled grain per panicle, 1000-grain weight, days to harvest and productivity, according to their relative weightage. The yield of the lines ranged between 4.82 - 6.60 ton/ha. Yield of Ciherang, Inpari 13 and Inpara 5 were 5.76, 4.85, and 4.82 ton/ha respectively. The selected DH lines will be used further in multilocation yield trial. [ABSTRACT FROM AUTHOR]

A mapping population of 95 doubled haploid lines of wheat Triticum aestivum L., raised by crosses between cultivar Chinese Spring (CS) and line SQ1, was grown in irrigated and rainfed conditions of South-East Kazakhstan (1998–2008 years), studied for grain quality traits, and characterized for Fe, Zn, and S content in grains. In addition to previous studies associated with grain productivity and drought stress torelance (Quarrie et al., 2005) and grain quality traits (Abugalieva et al., 2008), the range of variation in micronutrient contents in wheat grains of the CS × SQ1 doubled haploid population provides an excellent opportunity for identification of quantitative trait loci that control the amounts of Fe, Zn, and S in grains. Doubled haploid lines with stable high content of Fe and Zn grown in irrigated and rainfed conditions were obtained on the base of the referred work. The lines can be used in biofortification of spring wheat in Kazakhstan. The results reveal significant correlation indices between Zn and protein contents in grains. They may be important in local breeding programs for the improvement of productivity and grain quality.

Androgenesis has been studied in anther cultures of eight cultivars and one promising accession of spring common wheat raised in West Siberia (Siberian Research Institute of Agriculture, Omsk, Russia). The varieties are close in origin but vary in the presence or absence of wheat-alien translocations (wheat–rye 1RS.1BL and wheat–couch grass 7DL-7Ai). The promising accession L-311/00-22 bears the 1RS.1BL translocation and the cytoplasm of cultivated barley Hordeum vulgare L. The main task of the study is to assess the possibility of obtaining dihaploid lines in the genotypes examined bearing wheat-alien translocations. It has been found that different accessions respond differently to anther culture conditions depending on the concentration of 2,4-D in the initial medium. Accession L-311/00-22 is best for androgenesis experiments and raise of dihaploid lines. The dependence of the effect of the genotypic environment of wheat on the effect of wheat-alien translocation on androgenesis features, is discussed.

Improving salt tolerance of genotypes requires a source of genetic variation and multiple accurate selection criteria for discriminating their salt tolerance. A combination of morpho-physiological and biochemical parameters and multivariate analysis was used to detect salt tolerance variation in 15 wheat lines developed by doubled haploid (DHL) technique. They were then compared with the salt-tolerant check cultivar Sakha 93. Salinity stress was investigated at three salinity levels (0, 100, and 200 mM NaCl) for 25 days. Considerable genetic variation was observed for all traits, as was high heritability (>60%) and genetic gain (>20%). Principal component analysis indicated the ability of nine traits (root number, root length, root dry weight, shoot length, shoot dry weight, specific root length, relative water content, membrane stability index, and catalase) to identify differences in salinity tolerance among lines. Three traits (shoot length, shoot dry weight, and catalase) were indicative of salt-tolerance, indicating their importance in improving and evaluating salt tolerant genotypes for breeding programs. The salinity tolerance membership index based on these three traits classified one new line (DHL21) and the check cultivar (Sakha 93) as highly salt-tolerant, DHL25, DHL26, DHL2, DHL11, and DHL5 as tolerant, and DHL23 and DHL12 as intermediate. Discriminant function analysis and MANOVA suggested differences among the five groups of tolerance. Among the donor genotypes, Sakha 93 remained the donor of choice for improving salinity tolerance during the seedling stage. The tolerated lines (DHL21, DHL25, DHL26, DHL2, DHL11, and DHL5) could be also recommended as useful and novel genetic resources for improving salinity tolerance of wheat in breeding programs.

Copyright of Chinese Journal of Oil Crop Sciences is the property of Oil Crops Research Institute of Chinese Academy of Agricultural Sciences and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

The present study investigated drought-induced changes in proteome profiles of ten DH lines of winter barley, relatively varied in water deficit tolerance level. Additionally, the parameters describing the functioning of the photosynthetic apparatus and the activity of the antioxidative system were analysed. Water deficit (3-week growth in soil with water content reduced to ca. 35%) induced significant changes in leaf water relations and reduced photosynthetic activity, probably due to decreased stomatal conductance. It was associated with changes in protein abundance and altered activity of antioxidative enzymes. From 47 MS-identified proteins discriminating more tolerant from drought-sensitive genotypes, only two revealed distinctly higher while seven revealed lower abundance in drought-treated plants of tolerant DH lines in comparison to sensitive ones. The majority were involved in the dark phase of photosynthesis. Another factor of great importance seems to be the ability to sustain, during drought stress, relatively high activity of enzymes (SOD and CAT) decomposing reactive oxygen species and protecting plant cell from oxidative damages. Low molecular weight antioxidants seem to play less important roles. Our findings also suggest that high tolerance to drought stress in barley is a constitutively controlled trait regulated by the rate of protein synthesis and their activity level. Biological significance According to our knowledge, this is the first comparative proteomic analysis of drought tolerance performed for the model set of several winter barley doubled haploid (DH) lines. We analysed both the drought impact on the protein pattern of individual winter barley DH lines as well as comparisons between them according to their level of drought tolerance. We have identified 47 proteins discriminating drought-tolerant from drought-sensitive genotypes. The majority was involved in the dark phase of photosynthesis. Another factor of great importance in our opinion seems to be the ability to sustain, during drought stress, relatively high activity of antioxidative enzymes (SOD and CAT) decomposing reactive oxygen species and protecting plant cell from oxidative damages. Our findings also suggest that high tolerance to drought stress in barley is a constitutively-controlled trait regulated by the rate of protein synthesis and their activity level. [ABSTRACT FROM AUTHOR]

The changes in protein abundance induced by cold hardening were analysed by 2 DE in ten doubled haploid (DH) lines of winter barley, highly differentiated with respect to freezing tolerance level. Among 45 differential proteins identified by MALDI-TOF/TOF, the majority was classified as related to photosynthesis, carbohydrate metabolism, oxidation-reduction reactions and stress response. Among the detected proteins, higher abundance of RuBisCO large and small subunits, RuBisCO activase, two Oxygen-evolving enhancer proteins, Ferredoxin-NADP reductase, Cytochrome P450-dependent fatty acid hydroxylase and 14-3-3 protein was associated with higher freezing tolerance level. Lower relative level of hypothetical ATP synthase beta subunit, uncharacterized mitochondrial protein AtMg00810 and ribosomal RNA small subunit methyltransferase G also seems to be important. The results of proteomic studies were complemented by the evaluation of photosynthetic apparatus acclimation, showing distinctive differences between the studied genotypes in the number of active PSII reaction centres (RC/CS m ). Additionally, the analysis of antioxidative enzyme activities suggests the importance of H 2 O 2 as a signalling molecule possibly involved in the initiation of cold-induced plant acclimation. However, in DH lines with high freezing tolerance, H 2 O 2 generation during cold hardening treatment was accompanied by more stable activity of catalase, H 2 O 2 -decomposing enzyme. Significance In the study, the changes in protein abundance induced by cold hardening treatment were analysed by two-dimensional gel electrophoresis in ten doubled haploid (DH) lines of winter barley. Harnessing DH technology resulted in distinctive widening of genetic variation with respect to freezing tolerance level. Both the cold-hardening effect on the protein pattern in an individual winter barley DH line as well as the variation among the selected DH lines were investigated, which resulted in the identification of 45 differentiated proteins classified as involved in 14 metabolic pathways and cellular processes. Among them, eight proteins: (1) the precursor of RuBisCO large subunit, (2) RuBisCO small subunit (partial), (3) RuBisCO activase small isoform, (4) the precursor of Oxygen-evolving enhancer protein 1-like (predicted protein), (5) Oxygen-evolving enhancer protein 2, (6) the leaf isozyme of Ferredoxin-NADP reductase, (7) hypothetical protein M569_12509 Cytochrome P450-dependent fatty acid hydroxylase-like and (8) hypothetical protein BRADI_1g11290 (14-3-3 protein A-like) were accumulated to a higher level in leaves of cold-hardened seedlings of freezing tolerant winter barley DH lines in comparison with susceptible ones. Three others: (9) hypothetical protein BRADI_5g05668 F1 ATP synthase beta subunit-like, (10) predicted protein uncharacterized mitochondrial protein AtMg00810-like and (11) BnaA02g08010D Ribosomal RNA small subunit methyltransferase G-like were detected at lower level in freezing tolerant seedlings in comparison with susceptible genotypes. The last two were for the first time linked to cold acclimation. The results of complementary analyses indicate that PSII activity and stability of antioxidative enzymes under low temperature are also very important for freezing tolerance acquisition. [ABSTRACT FROM AUTHOR]

Development of cultivars better adapted to drought stress in the arid and semi arid climatic conditions is considered as a major breeding objective. Grain quality is a trait with physico-chemical complexity depending primarily on genotype, is strongly affected by environmental factors and their interactions. Effect of terminal drought stress on quality traits of 18 triticale lines, comprising of 9 doubled haploids (DH) and 9 F7-8 lines, and two bread wheat cultivars (Rowshan and Kavir), was investigated under two separate experiments (with/without drought stress) at the Research Farm of College of Agriculture, Isfahan University of Technology, Isfahan, Iran, during two growing seasons of 2007-2009. Plants were grown under full irrigation until the mid-jointing stage when drought stress was applied. In this experiment, amount of glutenin, gliadin, gliadin/glutenin ratio, dry gluten content, sediment volume SDS, crude protein, carbohydrate, ash, grain test weight and grain yield were evaluated. The results showed that triticale lines performed superior to wheat cultivars under drought stress conditions considering grain yield, but wheat cultivar possessed the highest values for majority of quality traits. Grain yield had negative and significant correlation (r = - 0.56**) with grain protein content under no-stress conditions, and with grain test weight (r = - 0.67**) under stress conditions. Accordingly, genotypes with more grain test weight and protein content under stress conditions were probably affected by drought stress. and this may be due to lower of plant performance under drought stress conditions than those under normal conditions. Grain yield produced under drought stress conditions negatively and significantly correlated with dry gluten and protein under non-stress conditions. Overall, based on the results of this research, it was concluded that under drought stress conditions at the reproductive stage, DH triticale line number 2 performed superior for grain quality and biochemical adaptation to drought stress.

Epistasis, an additive-by-additive interaction between quantitative trait loci, has been defined as a deviation from the sum of independent effects of individual genes. Epistasis between QTLs assayed in populations segregating for an entire genome has been found at a frequency close to that expected by chance alone. Recently, epistatic effects have been considered by many researchers as important for complex traits. In order to understand the genetic control of complex traits, it is necessary to clarify additive-by-additive interactions among genes. Herein we compare estimates of a parameter connected with the additive gene action calculated on the basis of two models: a model excluding epistasis and a model with additive-by-additive interaction effects. In this paper two data sets were analysed: 1) 150 barley doubled haploid lines derived from the Steptoe x Morex cross, and 2) 145 DH lines of barley obtained from the Harrington x TR306 cross. The results showed that in cases when the effect of epistasis was different from zero, the coefficient of determination was larger for the model with epistasis than for the one excluding epistasis. These results indicate that epistatic interaction plays an important role in controlling the expression of complex traits.

Epistasis (additive × additive interaction) plays an important role in the genetic architecture of complex traits. This study presents analytical and numerical comparisons of two methods of estimation of additive × additive interaction of QTL effects. In the first method, we observed only the plant phenotype, while in the second method we have additional information from the molecular markers observations. In this study, two data sets were analyzed: i) 150 barley (Hordeum vulgare L.) doubled-haploid lines derived from the cross Steptoe × Morex and ii) 145 doubled-haploid lines of barley obtained from the cross Harrington × TR306. In total, 153 sets of observations were analyzed. The additive × additive interaction effect calculated on the basis of the marker observations is smaller than the total additive × additive interaction effect obtained from phenotypic observations only.

One of cereal diseases that has gained a greater importance for growers, processing industry as well as for breeders in many regions of the world is Fusarium head blight (FHB) caused by fungi of the Fusarium genus. The objectives of this study were to test diversity among spring barley breeding lines exhibiting various sensitivity to FHB and to find RAPD markers and AFLP markers that will distinguish between susceptible and resistant and/or moderately resistant genotypes. A test of a set of spring barley genotypes artificially infected by fusaria in field trials was carried out. Based on the results from field and laboratory evaluation and deoxynivalenol (DON) content assessment, barley genotypes with different responses to FHB were selected. The genotypes were hybridized and doubled haploid (DH) lines were derived in F1 generation using the in vitro androgenesis method. Initial parental components and derived DH lines were tested for FHB infection and DON content. A set of parental genotypes of spring barley was tested with 80 RAPD markers. A RAPD marker (H30) was detected which enabled to distinguish between very susceptible parental genotypes and other resistant or moderately resistant spring barley genotypes based on the fragment of about 1300 bp. This specific product was screened in 23 DH lines derived from crosses of parental genotypes of spring barley and detected in 10 DH lines. During the study, some DH lines were selected that exhibited improved resistance to Fusarium infection. A low infection level and low DON content was found in the line DH 4/2 derived from CI 4196 × Foster. The AFLP technique was used to analyse parental genotypes of spring barley. The detected markers can be further evaluated and employed to select breeding materials.

Days to flowering (DTF) is an important trait impacting cultivar performance in oilseed rape ( Brassica napus L.), but the interaction of all loci controlling this trait in spring-type oilseed rape is not fully understood. We identified quantitative trait loci (QTL) for variation in DTF in a doubled haploid (DH) population from the Qinghai-Tibet Plateau that includes 217 lines derived from a cross between spring-type oilseed rape ( B. napus L.) line No. 5246 and line No. 4512, the latter of which is responsive to the effective accumulated temperature (EAT). A linkage map was constructed for the DH population, using 202 SSR and 293 AFLP markers. At least 22 DTF QTL were found in multiple environments. Four major QTL were located on linkage groups A7, C2, C8 and C8. Among these QTL, cqDTFA7a and cqDTFC2a were identified in five environments and individually explained 10.4 and 23.0 % of the trait variation, respectively. cqDTFC8, a major QTL observed in spring environments, and a unique winter environment QTL, qDTFC8- 3, were identified; these QTL explained 10.0 and 46.5 % of the phenotypic variation, respectively. Minor QTL (for example, cqDTFC2c) and epistatic interactions seemed evident in this population. Two closely linked SSR markers for cqDTFA7a and cqDTFC8 were developed (G1803 and S034). BnAP1, a B. napus gene with homology to Arabidopsis thaliana that was identified as a cqDTFA7a candidate gene, played a major role in this study. The allelic effects of the major and minor QTL on DTF were further validated in the DH population and in 93 breeding genotypes. [ABSTRACT FROM AUTHOR]