1. Comparison between automated and user-interactive non-targeted screening tools: isotopic profile deconvoluted chromatogram (IPDC) algorithm and HaloSeeker 1.0.
- Author
-
Fakouri Baygi, S., Hutinet, S., Cariou, R., Fernando, S., Hopke, P. K., Holsen, T. M., and Crimmins, B. S.
- Subjects
CHLORINATED paraffin ,CHROMATOGRAMS ,CHEMICAL formulas ,ALGORITHMS ,ISOTOPIC signatures - Abstract
A fully automated isotopic profile deconvoluted chromatogram (IPDC) algorithm (Fakouri Baygi et al. in Anal Chem 91:15509–15517, 2019) and user interactive HaloSeeker 1.0 (Léon et al. in Anal Chem 91:3500–3507, 2019) were compared to test the efficacy of these two computationally enhanced non-targeted screening (CENTS) tools in isolating unknown Br/Cl compounds using high-resolution mass spectrometry (HRMS) data. HaloSeeker depends on a user to monitor the performance of the peak picking algorithm and assign molecular formulas for each isotopic signature in an ergonomic interface. Alternatively, the IPDC algorithm automatically assigns and ranks candidate molecular formulas within a set of search criteria. Both CENTS tools were evaluated using fish and sediment data acquired at 22,000 (mHRMS) and > 100,000 (uHRMS) mass resolutions, respectively. The IPDC algorithm detected 85% of compounds detected by HaloSeeker as the first candidate compound in the sediment sample, with fewer false positives. In the sediment data, the IPDC algorithm detected several compounds such as clofoctol and chlorinated paraffins that were not reported using HaloSeeker 1.0. Upon further inspection, these compounds were isolated by the HaloSeeker program, but not reported by the user. HaloSeeker detected all significant and insignificant chemical ionization products (relative to IPDC), but additional false positives were isolated in the mHRMS polychlorinated biphenyl reference standard and trout sample. HaloSeeker detected 62% of the legacy contaminant features isolated by the IPDC algorithm in the fish data (mHRMS). The comparison of these two CENTS tools demonstrates that matrix complexity and mass resolution of the HRMS platform are the key factors when choosing automated and user interactive CENTS tools. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF