212 results on '"protein chromatography"'
Search Results
2. Bimodal gigaporous polystyrene microspheres with glycopolymer surfaces for high-speed protein chromatography
- Author
-
Sui, Xin-Yi, Zhu, Bing-Qi, Li, Yue, Che, Huan-Jie, Li, Jing, Zeng, Jingbin, and Qu, Jian-Bo
- Published
- 2022
- Full Text
- View/download PDF
3. The application of nuclear magnetic resonance towards understanding chromatographic separations of proteins
- Author
-
Chambers, Tamsin and Mantle, Mick
- Subjects
Protein chromatography ,NMR ,In-column interactions ,Mass transfer - Abstract
Protein chromatography remains indispensable for biomanufacturing, with multiple, orthogonal chromatographic techniques typically employed for the downstream processing of a single protein of interest. However, the mechanisms underpinning chromatographic separations and, consequently, the causes of atypical protein behaviour are not always fully understood. Nuclear magnetic resonance (NMR) can facilitate the direct study of opaque systems, such as intact chromatography columns, in a non-invasive manner under normal operating conditions, with techniques capable of examining intermolecular interactions and mass transfer phenomena, both of which contribute to the overall efficacy of a chromatographic separation. The separation of the monoclonal antibody NIP228 in a 4 mL Poros 50 HS column was used as the model system. Poros 50 HS is a strong cation exchange resin frequently used in industry, with an average particle size of 50 μm and bi-disperse pore distribution of so-called micro- and macro-pores. NMR behaviours of the buffer mobile phase within the chromatography column were first extensively characterised, including the impact of the structure of the packed porous bed, the surface chemistry of the resin, and the flow rate of the mobile phase on NMR relaxation, as well as diffusive transport of the buffer in the absence of flow within the chromatography system. The NIP228 protein sample was then added to the chromatography column, which was observed to generally enhance relaxation of the water molecules of the buffer mobile phase. The WATERGATE pulse sequence was utilised for the suppression of water signal, enabling the NMR behaviours of other protein sample constituents such as sucrose and NIP228 to be studied. It was then demonstrated how the 1H signal intensity of the resin sulfopropyl ligand measured using diffusion-weighting to gate out water signal and the T2 constant of the in-column water molecules could be used to accurately track the bind-and-elute chromatographic separation of NIP228. When studying mass transfer within the system, T2-T2 measurements proved ineffective for characterising the fast exchange of mobile phase water molecules between the inter- and intra-particle regions of the column; however, this behaviour could be studied using NMR propagator measurements, which also facilitated quantification of other transport parameters such as apparent axial and transverse dispersion coefficients. In addition, the impact of protein adsorption to the stationary phase on in-column transport of the mobile phase was studied, as was the effect of subsequent column sanitisation.
- Published
- 2022
- Full Text
- View/download PDF
4. 籬鱼背肌组织蛋白酶L的初步分离及蛋白层析纯化方法.
- Author
-
王谦, 焦熙栋, 闫博文, 孟令璐, 曹洪伟, 黄建联, 赵建新, 张 濒, 陈 卫, and 范大明
- Subjects
ION exchange chromatography ,SILVER carp ,AMMONIUM sulfate ,MOLECULAR sieves ,MOLECULAR weights ,COLUMN chromatography ,ION exchange (Chemistry) - Abstract
Copyright of Journal of Chinese Institute of Food Science & Technology / Zhongguo Shipin Xuebao is the property of Journal of Chinese Institute of Food Science & Technology Periodical Office and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2022
- Full Text
- View/download PDF
5. A framework for calculating orthogonal selectivities in multimodal systems directly from cell culture fluid.
- Author
-
Vecchiarello, Nicholas, Timmick, Steven M., and Cramer, Steven
- Abstract
This paper presents a straightforward approach for measuring and quantifying orthogonality directly in complex cell culture fluids (CCFs) without the requirement for tracking the retention behaviors of large sets of proteins. Null‐producing CCFs were fractionated using linear salt gradients at constant pH on a set of multimodal resins. Fractions were then analyzed by ultraperformance‐reversed phase liquid chromatography and the resulting chromatograms provided host cell protein (HCP) "fingerprints." Using these fingerprints, an inner product vector‐based approach was employed to quantify the degree of orthogonality between pairs of resins and operating conditions for these large HCP protein sets. To compare resin orthogonality behavior in different expression systems, the Chinese hamster ovary and Pichia pastoris null‐producing CCFs were examined. Orthogonality in multimodal systems was found to strongly depend on the expression system and the HCPs being screened. We also identified several unexpected pairs of multimodal resins within the same family that exhibited significant orthogonality. Furthermore, "self‐orthogonality" was evaluated between resins operated at different pHs, and important operating regimes were identified for maximizing orthogonal selectivities. The framework developed in this paper for calculating orthogonality without the need for labor‐intensive HCP tracking has important implications for efficient process development and resin/operating condition selection for both monoclonal antibody (mAb) polishing steps and non‐mAb processes. In addition, this study provides a tool to unlock the untapped potential of multimodal resins by aiding in their rational selection and incorporation. Finally, the orthogonality framework here can facilitate the development of sets of next‐generation multimodal resins specifically designed to provide highly orthogonal and efficient separations tailored for different expression systems. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
6. Purification of polyclonal immunoglobulin G from human serum using peptide‐based adsorbents.
- Author
-
Chu, Wenning, Sripada, Sobhana A., Reese, Hannah R., Bhandari, Dipendra, Adams, Augustus, Sly, Jae, Crapanzano, Michael, and Menegatti, Stefano
- Subjects
BLOOD proteins ,SORBENTS ,ECCENTRIC loads ,IMMUNOGLOBULIN G ,ECONOMIC recovery ,G proteins ,AGAROSE - Abstract
This study presents the chromatographic purification of immunoglobulin G (IgG) from human plasma using a two‐column process integrating the peptide‐based adsorbents LigaGuard™, which captures non‐Ig plasma proteins in flow‐through mode, and LigaTrap™, which isolates IgG in bind‐and‐elute. Buffer composition and column loading were optimized for both adsorbents. Two process configurations were evaluated. In the first design, plasma was fed to a LigaGuard™ column to capture plasma proteins, the effluent was loaded on the LigaTrap™ column, and the bound IgG was eluted with 63.8% global recovery and 99.7% purity; in comparison, Protein G agarose afforded approximately 67% recovery and 97.2% purity. In the alternative design, the LigaGuard™ column was utilized to polish the LigaTrap™ elution stream, affording 82.3% global recovery and 98.8% purity. Collectively, these results demonstrate the potential of a fully chromatographic process for purifying polyclonal IgG from plasma feedstocks. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
7. Phycobilisome isolation and C-phycocyanin purification from the cyanobacterium Aphanizomenon gracile
- Author
-
R. PIRON, T. BUSTAMANTE, A. BARRIGA, and N. LAGOS
- Subjects
mass spectrometry ,protein chromatography ,protein cross-linking. ,Botany ,QK1-989 - Abstract
Cyanobacterial phycobilisomes are made up from phycobiliproteins held together by linker proteins. Incident photons are absorbed by the phycobiliproteins that carry linear tetrapyrrole chromophores with extended conjugated bond systems. The chemical structure of the chromophores also bestows the phycobiliproteins with excellent radical scavenging and antioxidant properties and phycobiliproteins have pharmaceutical value as such. We purified and characterized the phycobilisome and its major protein constituent C-phycocyanin from the freshwater filamentous cyanobacterium Aphanizomenon gracile. Isolated phycobilisomes were shown to be intact and contained the phycobiliproteins allophyco-cyanin and C-phycocyanin, but not phycoerythrin, together with the classic set of linker proteins. C-phycocyanin could be easily purified and was of analytical grade with spectral characteristics similar to that of other cyanobacterial species. To our best knowledge, this is the first study to report the purification and characterization of the Aphanizomenon gracile phycobilisome and C-phycocyanin.
- Published
- 2019
- Full Text
- View/download PDF
8. Reexamining the diverse functions of arginine in biochemistry.
- Author
-
Gupta, Munishwar Nath and Uversky, Vladimir N.
- Subjects
- *
CYTOLOGY , *POLYPEPTIDES , *BIOCHEMISTRY , *PEPTIDES - Abstract
Arginine in a free-state and as part of peptides and proteins shows distinct tendency to form clusters. In free-form, it has been found useful in cryoprotection, as a drug excipient for both solid and liquid formulations, as an aggregation suppressor, and an eluent in protein chromatography. In many cases, the mechanisms by which arginine acts in all these applications is either debatable or at least continues to attract interest. It is quite possible that arginine clusters may be involved in many such applications. Furthermore, it is possible that such clusters are likely to behave as intrinsically disordered polypeptides. These considerations may help in understanding the roles of arginine in diverse applications and may even lead to better strategies for using arginine in different situations. • Arginine shows distinct tendency to form clusters. • In free-form, it has multiple applications in biotechnology and cellular biology. • The mechanisms of multiple arginine actions continue to attract interest. • It is quite possible that arginine clusters may be involved in many such applications. • It is likely that such clusters behave as intrinsically disordered polypeptides. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
9. Sample Preparation for Mass Spectrometry-Based Proteomics; from Proteomes to Peptides
- Author
-
Rogers, John C., Bomgarden, Ryan D., Mirzaei, Hamid, editor, and Carrasco, Martin, editor
- Published
- 2016
- Full Text
- View/download PDF
10. Protein Fractionation and Enrichment Prior to Proteomics Sample Preparation
- Author
-
Alpert, Andrew J., Mirzaei, Hamid, editor, and Carrasco, Martin, editor
- Published
- 2016
- Full Text
- View/download PDF
11. Cryo-electron microscopic and X-ray crystallographic analysis of the light-driven proton pump proteorhodopsin reveals a pentameric assembly
- Author
-
Stephan Hirschi, David Kalbermatter, Zöhre Ucurum, and Dimitrios Fotiadis
- Subjects
Cryo-electron microscopy ,Membrane protein ,Protein chromatography ,Proteorhodopsin ,Proton pump ,X-ray crystallography ,Biology (General) ,QH301-705.5 - Abstract
The green-light absorbing proteorhodopsin (GPR) is the prototype of bacterial light-driven proton pumps. It has been the focus of continuous research since its discovery 20 years ago and has sparked the development and application of various biophysical techniques. However, a certain controversy and ambiguity about the oligomeric assembly of GPR still remains. We present here the first tag-free purification of pentameric GPR. The combination of ion exchange and size exclusion chromatography yields homogeneous and highly pure untagged pentamers from GPR overexpressing Escherichia coli. The presented purification procedure provides native-like protein and excludes the need for affinity purification tags. Importantly, three-dimensional protein crystals of GPR were successfully grown and analyzed by X-ray crystallography. These results together with data from single particle cryo-electron microscopy provide direct evidence for the pentameric stoichiometry of purified GPR.
- Published
- 2020
- Full Text
- View/download PDF
12. A combined screening and in silico strategy for the rapid design of integrated downstream processes for process and product‐related impurity removal.
- Author
-
Vecchiarello, Nicholas, Timmick, Steven M., Goodwine, Chaz, Crowell, Laura E., Love, Kerry R., Love, J. Christopher, and Cramer, Steven M.
- Abstract
Integrated designs of chromatographic processes for purification of biopharmaceuticals provides potential gains in operational efficiency and reductions of costs and material requirements. We describe a combined method using screening and in silico algorithms for ranking chromatographic steps to rapidly design orthogonally selective integrated processes for purifying protein therapeutics from both process‐ and product‐related impurities. IFN‐α2b produced in Pichia pastoris containing a significant product variant challenge was used as a case study. The product and product‐related variants were screened on a set of 14 multimodal, ion exchange, and hydrophobic charge induction chromatography resins under various pH and salt linear gradient conditions. Data generated from reversed‐phase chromatography of the fractions collected were used to generate a retention database for IFN‐α2b and its variants. These data, in combination with a previously constructed process‐related impurity database for P. pastoris, were input into an in silico process development tool that generated and ranked all possible integrated chromatographic sequences for their ability to remove both process and product‐related impurities. Top‐ranking outputs guided the experimental refinement of two successful three step purification processes, one comprising all bind‐elute steps and the other having two bind‐elute steps and a flowthrough operation. This approach suggests a new platform‐like approach for rapidly designing purification processes for a range of proteins where separations of both process‐ and product‐related impurities are needed. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
13. Effect of flow behavior in extra-column volumes on the retention pattern of proteins in a small column.
- Author
-
Baran, Krystian, Marek, Wojciech Kazimierz, Piątkowski, Wojciech, and Antos, Dorota
- Subjects
- *
RF values (Chromatography) , *MOLECULAR weights , *SMALL molecules , *PROTEINS - Abstract
• Deformation of protein peaks in extra-column volume (ECV) was indicated. • ECV effect stems from radial velocity distribution and slow protein diffusivity. • ECV effect influences on the protein retention on a small column. • Mathematical model was used to predict the ECV effect. Experimental and theoretical analysis of deformation of band profiles in extra-column volumes (ECV) was performed, and its influence on the retention pattern of proteins in a small chromatographic column was quantified. Several macromolecule and small-molecule compounds, and their mixtures were eluted from a chromatographic system in the absence and presence of the column. The peak deformation in ECV was attributed to non-uniform velocity distribution in the radial direction in connecting capillaries. The phenomenon enhanced with increasing molecular weight of the model compound, when radial diffusion dominated the mechanism of band spreading. The band shape was also affected by the geometry of the injection system used, i.e., an injection loop capillary or a superloop. The phenomenon vanished for a small molecule compound, for which plug flow conditions could be established. The difference in flow behaviour of the macromolecule and small-molecule compounds caused them to migrate with different velocities in ECV, which resulted in partial separation of their bands. The ECV effect influenced the retention behaviour of macromolecules in a small column; it caused tailing of peaks and asymmetry of breakthrough curves. To describe the elution profiles in ECV and in the column, a mathematical model was used which accounted for non-ideality of the flow pattern. The model reproduced accurately band profiles of macromolecules within a range of relatively low velocities, typical however for protein chromatography. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
14. Phycobilisome isolation and C-phycocyanin purification from the cyanobacterium Aphanizomenon gracile.
- Author
-
PIRON, R., BUSTAMANTE, T., BARRIGA, A., and LAGOS, N.
- Subjects
APHANIZOMENON ,PHYCOBILISOMES ,PHYCOBILIPROTEINS ,CONJUGATED systems ,SPIRULINA ,MICROCYSTIS ,FILAMENTOUS bacteria ,CHEMICAL structure - Abstract
Cyanobacterial phycobilisomes are made up from phycobiliproteins held together by linker proteins. Incident photons are absorbed by the phycobiliproteins that carry linear tetrapyrrole chromophores with extended conjugated bond systems. The chemical structure of the chromophores also bestows the phycobiliproteins with excellent radical scavenging and antioxidant properties and phycobiliproteins have pharmaceutical value as such. We purified and characterized the phycobilisome and its major protein constituent C-phycocyanin from the freshwater filamentous cyanobacterium Aphanizomenon gracile. Isolated phycobilisomes were shown to be intact and contained the phycobiliproteins allophycocyanin and C-phycocyanin, but not phycoerythrin, together with the classic set of linker proteins. C-phycocyanin could be easily purified and was of analytical grade with spectral characteristics similar to that of other cyanobacterial species. To our best knowledge, this is the first study to report the purification and characterization of the Aphanizomenon gracile phycobilisome and C-phycocyanin. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
15. Nitroreductase Activites in Giardia lamblia: ORF 17150 Encodes a Quinone Reductase with Nitroreductase Activity
- Author
-
Joachim Müller, Manfred Heller, Anne-Christine Uldry, Sophie Braga, and Norbert Müller
- Subjects
anaerobic metabolism ,drug susceptibility ,functional assays ,mass spectrometry ,protein chromatography ,Medicine - Abstract
The intestinal diplomonadid Giardia lamblia is a causative agent of persistent diarrhea. Current treatments are based on nitro drugs, especially metronidazole. Nitro compounds are activated by reduction, yielding toxic intermediates. The enzymatic systems responsible for this activation are not completely understood. By fractionating cell free crude extracts by size exclusion chromatography followed by mass spectrometry, enzymes with nitroreductase (NR) activities are identified. The protein encoded by ORF 17150 found in two pools with NR activities is overexpressed and characterized. In pools of fractions with main NR activities, previously-known NRs are identified, as well as a previously uncharacterized protein encoded by ORF 17150. Recombinant protein 17150 is a flavoprotein with NADPH-dependent quinone reductase and NR activities. Besides a set of previously identified NRs, we have identified a novel enzyme with NR activity.
- Published
- 2021
- Full Text
- View/download PDF
16. Grafting glycidyl methacrylate-iminodiacetic acid conjugate to Sepharose FF for fabrication of high-capacity protein cation exchangers.
- Author
-
Li, Xianxiu, Wang, Qianqian, Dong, Xiaoyan, Liu, Yang, and Sun, Yan
- Subjects
- *
GLYCIDYL methacrylate , *SEPHAROSE , *ION exchange resins , *POLYMERIZATION , *LYSOZYMES - Abstract
Highlights • Polymer-grafted cation exchangers of 6 chain lengths/ionic capacities were prepared. • Adsorption capacity reached over 300 mg/mL at ionic capacities of 480 and 590 mmol/L. • Protein uptake rates on the two resins enhanced with increasing salt concentration. • Dynamic capacities of the two resins kept at 200–270 mg/mL below 100 mmol/L NaCl. Abstract This work was designed to acquire novel high-capacity cation exchangers by grafting glycidyl methacrylate (GMA)-iminodiacetic acid (IDA) conjugate (GMA-IDA) to Sepharose FF. Six GMA-IDA-grafted resins of the same grafting density but different chain lengths (ionic capacities, ICs) were synthesized and denoted as FF-Br2-pG-I n ( n denotes for IC value). Lysozyme adsorption and chromatography were studied to evaluate the cation exchangers. It was found that resins of moderate IC values (FF-Br2-pG-I480 and FF-Br2-pG-I590) afforded lysozyme adsorption capacities higher than 300 mg/mL at 50 and 100 mmol/L NaCl, over three times higher than the commercial resin CM Sepharose FF. Beside, the uptake rate ( D e / D 0 ) of lysozyme decreased with increasing IC at 50 mmol/L NaCl because of the increased polymer chain length that limited surface diffusion of the bound protein. Protein adsorption capacities of FF-Br2-pG-I480 and FF-Br2-pG-I590 kept higher than that of CM Sepharose FF in the salt concentration range of 0–150 mmol/L, and the uptake rates on the two resins increased with increasing salt concentration. Therefore, the dynamic binding capacities of them were remarkably higher than that of CM Sepharose FF and kept over 70 mg/mL at the salt concentration up to 150 mmol/L. The results demonstrated that GMA-IDA-grafted resins are promising for use as high-capacity protein chromatography. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
17. Prediction tool for loading, isocratic elution, gradient elution and scaling up of ion exchange chromatography of proteins.
- Author
-
Marek, Wojciech Kazimierz, Sauer, Dominik, Dürauer, Astrid, Jungbauer, Alois, Piątkowski, Wojciech, and Antos, Dorota
- Subjects
- *
ION exchange (Chemistry) , *PROTEINS , *DISPERSION (Atmospheric chemistry) , *CYCLIC loads , *LIQUID chromatography - Abstract
An efficient mathematical tool for the design and scaling up of protein chromatography is suggested, in which the model parameters can be determined quickly over a wide operating space without large material investments. The design method is based on mathematical modelling of column dynamics and moment analysis. The accuracy of the dynamic models that are most frequently used for simulations of chromatographic processes is analyzed, and possible errors that can be generated using the moment analysis are indicated. The so-called transport dispersive model was eventually employed for the process simulations. The model was modified to account for the protein dispersion in void volumes of chromatographic systems. The manner of the model calibration was suggested, which was based on a few chromatographic runs and verified over a wide space of the operating parameters, including composition and flow rate of the mobile phase, column dimensions, residence time, and mass loading. The model system for the study was ion-exchange chromatography. The analysis was performed based on the elution profiles of basic fibroblast growth factor 2 and lysozyme, on two different IEX media. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
18. Chromatographic separation of similar post-translationally modified metallothioneins reveals the changing conformations of apo-MT upon cysteine alkylation by high resolution LC-ESI-MS.
- Author
-
Irvine, Gordon W. and Stillman, Martin J.
- Subjects
- *
METALLOTHIONEIN , *HOMEOSTASIS , *OXIDATION-reduction reaction , *HEAVY metal toxicology , *LIQUID chromatography - Abstract
Metallothioneins (MTs) are a class of small cysteine-rich proteins essential for Zn and Cu homeostasis, heavy metal detoxification, and cellular redox chemistry. Herein, we describe the separation and characterization of MTs differentially modified with N-ethylmaleimide (NEM) by liquid chromatography-mass spectrometry (LC-MS). The full-length recombinant MT isoform 1a as well as is isolated domain fragments were first alkylated, then separated on column with subsequent detection by ultra-high resolution ESI-MS. Different behavior was observed for the three peptides with the full-length protein and the isolated α-domain exhibiting similar separation characteristics. For the isolated β-domain, the smallest peptide with 9 cysteines in the sequence, each alkylated species was well separated, indicating large changes in protein conformation. For the full-length (20 cysteines in the sequence) and α-domain (11 cysteiens in the sequence) peptides, the apo- and lightly alkylated species co-eluted, indicating similar structural properties. However, the more extensively alkylated species were well separated from each other, indicating the sequential unfolding of the apo-MT peptides and providing evidence for the mechanistic explanation for the cooperative alkylation reaction observed for NEM and other bulky and hydrophobic alkylation reagents. We show for the first time clear separation of highly similar MTs, differing by only +125 Da, and can infer structural properties from the LC-MS data, analogous to more complicated and less ubiquitous ion-mobility experiments. The data suggest a compact globular structure for each of the apo-MTs, but where the β-domain is more easily unfolded. This differential folding stability may have biological implications in terms of domain-specific participation of MT in cellular redox chemistry and resulting metal release. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
19. A framework for calculating orthogonal selectivities in multimodal systems directly from cell culture fluid
- Author
-
Nicholas Vecchiarello, Steven M. Timmick, and Steven M. Cramer
- Subjects
Chromatography, Reverse-Phase ,Computer science ,Process development ,Cell Culture Techniques ,Bioengineering ,CHO Cells ,Hydrogen-Ion Concentration ,Applied Microbiology and Biotechnology ,Recombinant Proteins ,Expression (mathematics) ,Culture Media ,High-Throughput Screening Assays ,Set (abstract data type) ,Cricetulus ,Orthogonality ,Cricetinae ,Saccharomycetales ,Animals ,Protein chromatography ,Biological system ,Chromatography, High Pressure Liquid ,Biotechnology - Abstract
This paper presents a straightforward approach for measuring and quantifying orthogonality directly in complex cell culture fluids (CCFs) without the requirement for tracking the retention behaviors of large sets of proteins. Null-producing CCFs were fractionated using linear salt gradients at constant pH on a set of multimodal resins. Fractions were then analyzed by ultraperformance-reversed phase liquid chromatography and the resulting chromatograms provided host cell protein (HCP) "fingerprints." Using these fingerprints, an inner product vector-based approach was employed to quantify the degree of orthogonality between pairs of resins and operating conditions for these large HCP protein sets. To compare resin orthogonality behavior in different expression systems, the Chinese hamster ovary and Pichia pastoris null-producing CCFs were examined. Orthogonality in multimodal systems was found to strongly depend on the expression system and the HCPs being screened. We also identified several unexpected pairs of multimodal resins within the same family that exhibited significant orthogonality. Furthermore, "self-orthogonality" was evaluated between resins operated at different pHs, and important operating regimes were identified for maximizing orthogonal selectivities. The framework developed in this paper for calculating orthogonality without the need for labor-intensive HCP tracking has important implications for efficient process development and resin/operating condition selection for both monoclonal antibody (mAb) polishing steps and non-mAb processes. In addition, this study provides a tool to unlock the untapped potential of multimodal resins by aiding in their rational selection and incorporation. Finally, the orthogonality framework here can facilitate the development of sets of next-generation multimodal resins specifically designed to provide highly orthogonal and efficient separations tailored for different expression systems.
- Published
- 2021
- Full Text
- View/download PDF
20. Synthesis of Bimodal Open-Porous Polystyrene Monoliths with Glycopolymer Surfaces for High-Speed Protein Chromatography
- Author
-
Liu Yuan, Jing Li, Jian-Bo Qu, Bing-Qi Zhu, Yong-Jun Sun, Wen-Shu Peng, and Yang-Yang Lin
- Subjects
chemistry.chemical_compound ,Materials science ,Polymers and Plastics ,chemistry ,Hydrophobic surfaces ,Chemical engineering ,Process Chemistry and Technology ,Glycopolymer ,Organic Chemistry ,Polystyrene ,Protein chromatography ,Porosity - Abstract
Conventional polystyrene (PS) monoliths are rarely used for separation of biomacromolecules due to their heterogeneous skeletons and hydrophobic surfaces. In this work, high-permeable and bimodal o...
- Published
- 2021
- Full Text
- View/download PDF
21. Controlling cell adhesion in antibody purification by expanded bed adsorption chromatography.
- Author
-
D'Souza, Roy N., Kakarla, Prasad Babu, Yelemane, Vikas, Meyer, Roland, den Boer, Piet, and Fernández-Lahore, Marcelo
- Subjects
- *
CELL adhesion , *IMMUNOGLOBULINS , *ADSORPTION chromatography , *HYDRODYNAMICS , *PROCESS optimization - Abstract
This study introduces an improved approach for determining the most suitable mobile phase maximizing repulsion between biomass and adsorbent to reduce biomass fouling in expanded bed adsorption (EBA) chromatography. Extended DLVO theory (xDLVO) has been utilized to comprehensively calculate optimal mobile phase compositions, thus increasing efficiency, improving hydrodynamics as well as product recovery. Biomass-adsorbent interaction energy surfaces were generated as a function of pH, ionic strength, and salt type, investigating the interactions of CHO cells with MabDirect® Protein-A beads. We have shown that mobile phases consisting of Na 2 SO 4 were best suited at low ionic strength, whereas NaCl was more favorable at higher ionic strength. This was found to increase product recovery while maintaining a constant level of purity of monoclonal antibodies. Our method provides a tool for rapid method development of EBA purifications that can be dynamically adapted to operational requirements. In our case, the resulting optimized process was able to outperform the current protocol by up to 10% in terms of product recovery. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
22. Ionic liquid-regenerated macroporous cellulose monolith: Fabrication, characterization and its protein chromatography.
- Author
-
Du, Kaifeng
- Subjects
- *
CELLULOSE , *IONIC liquids , *PROTEIN crosslinking , *CHROMATOGRAPHIC analysis , *POROUS materials - Abstract
Macroporous cellulose monolith as chromatographic support was successfully fabricated from an ionic liquid dissolved cellulose solution by an emulsification method and followed by the cross-linking reaction and DEAE modification. With the physical characterization, the cellulose monolith featured by both the interconnected macropores in range of 0.5–2.5 μm and the diffusion pores centered at about 10 nm. Given the bimodal pore system, the monolith possessed the specific surface area of 36.4 m 2 g −1 and the column permeability of about 7.45 × 10 −14 m 2 . After the DEAE modification, the anion cellulose monolith was evaluated for its chromatography performances. It demonstrated that the static and dynamic adsorption capacity of BSA reached about 66.7 mg mL −1 and 43.9 mg mL −1 at 10% breakthrough point, respectively. The results were comparable to other chromatographic adsorbent. In addition, the proteins mixture with different p I was well separated at high flow velocity (611.0 cm h −1 ) and high protein recovery (over 97%), proving the macroporous cellulose monolith had excellent separation performance. In this way, the prepared cellulose monolith with bimodal pores system is expected for the potential application in high-speed chromatography. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
23. Flow behavior of protein solutions in a lab-scale chromatographic system.
- Author
-
Filip, Bartłomiej, Bochenek, Roman, Marek, Wojciech K., and Antos, Dorota
- Subjects
- *
COMPUTATIONAL fluid dynamics , *PACKED towers (Chemical engineering) , *FLUID dynamics , *MEASUREMENT of viscosity , *VISCOSITY solutions , *PROTEINS - Abstract
• Protein elution in a lab chromatographic system was described by the CFD model. • Elution of low-viscosity (LV) and high-viscosity (HV) samples was examined. • For LV band broadening was pronounced in the injector and the column hardware. • For HV band broadening was pronounced in packed bed due to viscosity effects. • CFD model accurately predicted band broadening and viscous fingering effect. A fluid dynamics model has been developed to describe flow behavior in a lab-scale chromatographic system dedicated for protein processing. The case study included a detailed analysis of elution pattern of a protein, which was a monoclonal antibody, glycerol, and their mixtures in aqueous solutions. Glycerol solutions mimicked viscous environment of the concentrated protein solutions. The model accounted for concentration dependences of solution viscosity and density, and dispersion anisotropy in the packed bed. It was implemented into a commercial computational fluid dynamics software using user-defined functions. The prediction efficiency was successfully verified by comparing the model simulations in the form of the concentration profiles and their variances with the corresponding experimental data. The contribution of the individual elements of the chromatographic system to protein band broadening was evaluated for different configurations: for the extra-column volumes in the absence of the chromatographic column, for the zero-length column without the packed bed and for the column containing the packed bed. The influence of the operating variables, including: the mobile phase flowrate, the type of the injection system, i.e., the injection loop capillary or the superloop, the injection volume and the length of the packed bed, on band broadening of the protein was determined under nonadsorbing conditions. For protein solutions having viscosity comparable with the mobile phase, the flow behavior either in the column hardware or in the injection system made major contributions to band broadening, which depended on the type of the injection system. For highly viscous protein solution, the flow behavior in the packed bed exerted a dominant influence on band broadening. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
24. Multi-size optimization of macroporous cellulose beads as protein anion exchangers: Effects of macropore size, protein size, and ligand length.
- Author
-
Qiao, Liangzhi, Li, Qincong, Xie, Jiao, and Du, Kaifeng
- Subjects
- *
CELLULOSE , *SURFACE diffusion , *POLYMERS , *ADSORPTION capacity , *PROTEINS , *MACROPOROUS polymers - Abstract
• Multi-size optimization of macroporous cellulose microspheres. • Larger macropores are beneficial to the mass transfer of proteins. • Smaller macropores can also improve uptake kinetic by surface diffusion. • Increasing the ligand length significantly improves the adsorption performance. Multi-size optimization of ion exchangers based on protein characteristics and understanding of underlying mechanism is crucial to achieve maximum separation performance in terms of adsorption capacity and uptake kinetic. Herein, we characterize the effects of three different sizes, macropore size, protein size, and ligand length, on the protein adsorption capacity and uptake kinetic of macroporous cellulose beads, and provide insights into the underlying mechanism. In detail, (1) for smaller bovine serum albumin, macropore size has a negligible effect on the adsorption capacity, while for larger γ-globulin, larger macropores improve the adsorption capacity due to the high accessibility of binding sites; (2) there is a critical pore size (CPZ), at which the adsorption uptake kinetic is minimum. When pore sizes are higher than the CPZ, uptake kinetics are enhanced by pore diffusion. When pore sizes are lower than CPZ, uptake kinetics are enhanced by surface diffusion; (3) increasing ligand length improves the adsorption capacity by three-dimensionally extended polymer chains in pores and enhances uptake kinetic by improved surface diffusion. This study offers an integrated perspective to qualitatively assess the effects of multiple sizes, providing guidance for designing advanced ion exchangers for protein chromatography. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
25. Protein adsorption to diethylaminoethyl-dextran grafted macroporous cellulose microspheres: A critical pore size for enhanced adsorption capacity and uptake kinetic.
- Author
-
Qiao, Liangzhi, Zhou, Qing, and Du, Kaifeng
- Subjects
- *
MACROPOROUS polymers , *CELLULOSE , *ADSORPTION kinetics , *MICROSPHERES , *ADSORPTION (Chemistry) , *SERUM albumin , *ADSORPTION capacity - Abstract
[Display omitted] • Effect of pore size on the performance of grafting-ligand ion exchangers was studied. • Four media with the average pore sizes ranging from 164.57 to 281.96 nm were prepared. • A critical pore size with maximum adsorption capacity and fastest uptake kinetic exists. • The critical pore sizes of BSA and γ-globulin are 216.64 and 266.93 nm, respectively. To study the details of the effect of pore size on the performance of grafting-ligand ion exchangers, four diethylaminoethyl-dextran grafted macroporous cellulose microspheres with different pore sizes ranging from 164.57 to 281.96 nm were selected to investigate their adsorption equilibria and kinetics for bovine serum albumin (BSA) and γ-globulin. It was found that for whether adsorption equilibria or uptake kinetics, both the proteins showed increasing-then-decreasing trends with the decreasing pore size. More importantly, for a specific protein, the maximum adsorption capacity and fastest uptake rate were achieved on the same media, indicating the existence of a critical pore size (CPZ), at which the adsorption capacity and uptake kinetic are significantly enhanced synchronously. The CPZs of BSA and γ-globulin were identified to be 216.64 and 266.93 nm, respectively. Experimental results and analyses revealed that the high adsorption capacities at CPZ are attributed to the high utilization of binding sites in pores, and the uptake kinetics are enhanced by the combination of fast pore diffusion and chain delivery effect. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
26. Protein chromatography by molecular imprinted cryogels
- Author
-
Adil Denizli, Handan Yavuz, and Nilay Bereli
- Subjects
chemistry.chemical_classification ,Chromatography ,010405 organic chemistry ,Chemistry ,010401 analytical chemistry ,Clinical Biochemistry ,Pharmaceutical Science ,Polymer ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,Analytical Chemistry ,Protein recognition ,Protein chromatography ,Molecular imprinting - Abstract
Molecularly imprinted cryogels for protein recognition have received much attention in recent years with the development of supermacroporous polymer systems. Molecularly imprinted cryogels, which o...
- Published
- 2020
- Full Text
- View/download PDF
27. Protein Adsorption and Separation in Multimodal Anion Exchange Chromatography Media
- Subjects
Competitive adsorption ,Multimodal anion exchange ,Protein aggregation ,Protein chromatography - Abstract
Multimodal chromatography resins comprising ligands that combine charged and hydrophobic moieties provide advantages over their monomodal counterparts. In order to implement these resins in practical processes, it is necessary to understand how ligand chemistry and the physical properties of the resin matrix impact protein adsorption, selectivity, and transport. This work focuses on multimodal anion exchange (MMAEX) resins combining a quaternary ammonium ion group with hydrophobic moieties. The first portion of this work includes physical characterization of four MMAEX resins with different ligand chemistries. Single-component systems of the relatively large proteins bovine serum albumin (BSA) monomer, BSA dimer, and thyroglobulin (Tg) are studied. Adsorption kinetics are shown to be controlled by pore diffusion for all four resins and proteins, but with diffusivities that decrease as the protein size increases. The second portion of this work focuses on frontal separation performance for two multimodal anion exchange resins, Nuvia aPrime and Capto Adhere ImpRes, compared with the monomodal resin Nuvia HP-Q using mixtures of monomeric and dimeric bovine serum albumin as a model. Although preferential binding of the dimer over monomer is observed for all three resins, frontal separation results show better separation performance on Nuvia HP-Q compared to the multimodal resins at low ionic strength. Additionally, elution of the loaded protein from the multimodal resins shows increased composition of aggregates and oligomers that were not present in the feed mixture. Aggregate formation in multimodal resins is investigated in the third portion. For the multimodal resins, adsorbing BSA in pure monomeric form at low ionic strength and desorbing in 1 M NaCl results in the formation of dimer and higher order oligomers to an extent that depends on the time of incubation and the load conditions. Longer incubation times, load buffers leading to stronger binding, and higher temperatures resulted in more extensive formation of oligomers. The oligomers appear to be formed directly on the chromatographic surface. Oligomer formation on the multimodal resins affects the separation of monomer-dimer mixtures by frontal chromatography impairing the ability of the dimer in the feed to displace the adsorbed monomer since the latter is gradually converted to more strongly bound species during loading. Last, an analysis of the relationship between the number of plates measured with a small molecule tracer and the breakthrough curve of a strongly bound protein in short laboratory chromatography columns (1-5 cm) considering flow non-uniformity is presented. The model presented provides a tool to model experimental breakthrough data and to assess the degree of flow uniformity required to obtain meaningful dynamic binding capacity measurements using minicolumns in a high-throughput lab setting.
- Published
- 2022
- Full Text
- View/download PDF
28. Purification and characterization of platelet aggregation inhibitor from the Gloydius blomhoffii brevicaudus venom
- Author
-
A. I. Zhukova and G. L. Volkov
- Subjects
snake venom ,g. blomhoffii brevicaudus ,platelet aggregation inhibitor ,protein chromatography ,Biology (General) ,QH301-705.5 - Abstract
Gloydius venom is a rich natural source of proteins possessing platelet aggregation inhibition activity. These proteins or their recombinant analogs are universal instruments for the investigation of proteins and receptors interaction in hemostatic system. At the same time previously studied and potentially new pharmacological properties of platelet aggregation inhibitors from snake venoms create a background for the development of the manufacturing technologies. This study presents a part of technological development of several target proteins parallel obtaining from G. blomhoffii brevicaudus snake venom, in particular development of manufacturing steps for platelet aggregation inhibitor.The target protein was purified using three different chromatographic approaches. It was shown that it is a single chain protein with molecular weight 12001.55 Da, isoelectrical point 8.03, which inhibited platelet aggregation in the rabbit platelet rich plasma with ID50 = 3.26×10-6 g or 542×10-9 М and revealing no enzyme activity.
- Published
- 2012
- Full Text
- View/download PDF
29. Design and Application of Novel Membrane Materials
- Author
-
Bateman, Orland
- Subjects
membrane charactization ,Mixed-matrix membranes ,membranes ,protein chromatography ,Chemical Engineering ,phase inversion micromoulding ,ceramic membrane, PVDF crystal phase ,composite membranes ,FOS: Chemical engineering - Abstract
Membrane technology is uniquely suited to meet the growing need for more sustainable processes due to membranes��� tailorable selectivity and energy efficiency. Efforts to further improve membrane performance and modify them for new applications have found success in academic studies with a versatile class of membranes known as mixed-matrix membranes (MMM). Mixed-matrix membranes combine the strength and controlled morphology of semicrystalline polymeric membranes with superior functionality of a separate material dispersed in the polymer matrix. The strength and toughness of the resulting membranes depends on polymer morphology, including degree of crystallinity and pore structure. Control of the membrane morphology is achieved by kinetically trapping a partially phase separated state, for example, using Nonsolvent Induced Phase Separation (NIPS) to drive liquid-liquid and solid-liquid demixing. However, the processes used to control the polymer morphology are influenced by the functional particles and can result in novel morphologies. In Chapter 2, we used a promising strategy for stably incorporating functional polymeric particles in a structural polymer matrix to investigate the role of the particles during NIPS. The interplay of functional polymeric particle loading and nonsolvent induced phase separation are examined using x-ray diffraction (to deduce the crystal morph adopted by polyvinylidene difluoride, PVDF) and scanning electron microscopy (to observe membrane morphology and the size and distribution of functional particles). We found that the interaction between nonsolvent and functional particles enables a shift in crystal phase usually not attainable with our solvent. In addition to studying the fundamentals underlying MMM formation, we investigated two applications for novel membrane materials: purification of therapeutic antibodies and size-selective particle capture. Purification of proteins for medical use requires several chromatographic steps in order to produce solutions of sufficient purity. For many years, the gold standard in the field was resin-based packed bed chromatography; however, more recently membrane chromatography has gained prevalence due to its faster processing time, lower cost, and low operating pressure. With these advantages come the drawbacks of low binding capacity and a sensitivity to the concentration of salt ions in the solution. To address these two drawbacks, we investigated the chromatographic abilities of a modified MMM, in Chapter 3, and a novel membrane material comprising an MMM-ceramic composite, in Chapter 4. We discovered that the performance of the modified MMM is dependent on crosslinker chemistry and crosslink density. Upon optimization, the modified membrane demonstrated a binding capacity consistent with the upper range of available literature values as well as reduced sensitivity to salt. In addition, the development of the novel MMM-ceramic composite enables the use of a broader range of polymer matrix compositions for membrane chromatography. Capture of pathogens from complex fluids, such as blood, has received substantial attention due to rising rates of sepsis and antibiotic resistance. In Chapter 5, we pursued the capture of pathogens from model fluids using the size-based separation capabilities of dendritic ceramic membranes. We found that interactions between the ceramic surface and the suspended particles played a significant role in membrane performance.
- Published
- 2022
- Full Text
- View/download PDF
30. Solubilization of Membrane Proteins into Functional Lipid-Bilayer Nanodiscs Using a Diisobutylene/Maleic Acid Copolymer.
- Author
-
Oluwole, Abraham Olusegun, Danielczak, Bartholomäus, Meister, Annette, Babalola, Jonathan Oyebamiji, Vargas, Carolyn, and Keller, Sandro
- Subjects
- *
MEMBRANE proteins , *CELL membranes , *PROTEINS , *MALEIC acid , *COPOLYMERS , *POLYMERS - Abstract
Once removed from their natural environment, membrane proteins depend on membrane-mimetic systems to retain their native structures and functions. To this end, lipid-bilayer nanodiscs that are bounded by scaffold proteins or amphiphilic polymers such as styrene/maleic acid (SMA) copolymers have been introduced as alternatives to detergent micelles and liposomes for in vitro membrane-protein research. Herein, we show that an alternating diisobutylene/maleic acid (DIBMA) copolymer shows equal performance to SMA in solubilizing phospholipids, stabilizes an integral membrane enzyme in functional bilayer nanodiscs, and extracts proteins of various sizes directly from cellular membranes. Unlike aromatic SMA, aliphatic DIBMA has only a mild effect on lipid acyl-chain order, does not interfere with optical spectroscopy in the far-UV range, and does not precipitate in the presence of low millimolar concentrations of divalent cations. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
31. Multiple, simultaneous, independent gradients for a versatile multidimensional liquid chromatography. Part II: Application 1 - Large increases in isoform resolution of human transferrin by use of dual simultaneous independent gradients of pH & acetonitrile on a mixed bed (anion exchange plus reversed phase) stationary phase
- Author
-
Tsonev, Latchezar I. and Hirsh, Allen G.
- Subjects
- *
LIQUID chromatography-mass spectrometry , *TRANSFERRIN , *PH effect , *UNCOUPLING proteins , *ION exchange resins , *HYDROPHOBIC surfaces , *STATIONARY phase (Chromatography) - Abstract
We have previously described a liquid chromatographic (LC) method for uncoupling controlled, wide range pH gradients and simultaneous controlled gradients of a non-buffering solute on ion exchange resins (Hirsh and Tsonev, 2012) [1]. Here we report the application of this two dimensional LC technique to the problem of resolving Human Transferrin (HT) isoforms. This important iron transporting protein should theoretically occur in several thousand glycoforms, but only about a dozen have been reported. Using dual simultaneous independent gradients (DSIGs) of acetonitrile (ACN) and pH on a mixed bed stationary phase (SP) consisting of a mixture of an anion exchange resin and a reversed phase (RP) resin we partially resolve about 60 isoforms. These are likely to be partially refolded glycoforms generated by interaction of HT with the highly hydrophobic RP SP, as well as distinct folded glycoforms. Thus this study should have interesting implications for both glycoform separation and the study of protein folding. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
32. Challenges in liquid chromatographic characterization of proteins.
- Author
-
Bobály, Balázs, Sipkó, Enikő, and Fekete, Jenő
- Subjects
- *
LIQUID chromatography , *DRUG approval , *BIOPHARMACEUTICS , *DRUG stability , *DRUG development , *DRUG analysis - Abstract
Various liquid chromatographic techniques are considered standard analytical methods in proteins characterization. These methods provide essential information for drug approval, for biological and life sciences. On the other hand, there are some issues and challenges which have to be taken into account when analyzing these biopharmaceuticals. The aim of this review to summarize the most recent knowledge relating to the following topics: i) sample stability and complexity ii) adsorption problems: instrument inertness iii) adsorption problems: recovery from the stationary phase and iv) challenges in method development. This information is supposed to help practicing chromatographers in the emerging field of therapeutic protein chromatography. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
33. Polymer-Grafted and Agarose-Encapsulated Adsorbents for Protein and Bioparticle Purification
- Subjects
Agarose-encapsulated hydroxyapatite ,Protein Chromatography ,Chromatography modelling ,Polymer-grafted anion exchange - Abstract
Understanding the interplay between the stationary phase architecture and the mechanism of protein adsorption and transport is vital for the optimal design of chromatographic processes. This work studies the properties of stationary phases obtained by modifying a base matrix by grafting dextran polymers or by the incorporation in agarose gels. Anion exchangers with low graft content (Nuvia HR Q and Nuvia HP Q) and high graft content (Nuvia Q) are considered. The accessible pore volume decreases with increasing polymer-graft content. Conversely, the binding capacity for bovine serum albumin (BSA) and thyroglobulin (Tg) increases with polymer-graft content. Dynamic binding capacities significantly increase at moderate NaCl concentrations for all polymer-grafted adsorbents. Breakthrough of mixtures of BSA and Tg demonstrates a higher selectivity for resins with intermediate graft density as well as a reversal in the order of breakthrough with the addition of NaCl. Pore diffusion best describes the adsorption kinetics of BSA and Tg on ungrafted resins while single file diffusion best describes two-component adsorption for highly grafted resins indicating that counter diffusion of displaced species hinders transport. Novel composite-particles, obtained by encapsulating ceramic hydroxyapatite type-I particles (CHT), in inert agarose-beads were prepared via an emulsion method. The composite beads combine two chromatographic principles: separation by molecular size and separation by selective adsorption occurring within the encapsulated CHT particles. Adsorption capacities of BSA and RNA are lower on a bead volume basis relative to unencapsulated CHT; however, on a CHT volume basis, adsorption is similar to unencapsulated CHT suggesting that the agarose does not inhibit adsorption. Confocal laser scanning microscopy images show that large proteins such as Tg and IgM, and 30 nm and 50 nm nanoparticles are largely excluded from encapsulated CHT particles. Two-component breakthrough of mixtures containing 30 nm nanoparticles and either BSA or RNA demonstrate that the applicability of these novel materials to the flow-through purification of large proteins and bioparticles.
- Published
- 2021
- Full Text
- View/download PDF
34. Purification of polyclonal immunoglobulin G from human serum using peptide‐based adsorbents
- Author
-
Dipendra Bhandari, Jae Sly, Augustus Adams, Michael Crapanzano, Hannah Reese, Stefano Menegatti, Chu Wenning, and Sobhana A. Sripada
- Subjects
chemistry.chemical_classification ,Environmental Engineering ,Biochemistry ,biology ,chemistry ,Polyclonal antibodies ,General Chemical Engineering ,biology.protein ,Peptide ,Protein chromatography ,Immunoglobulin G ,Biotechnology - Published
- 2021
- Full Text
- View/download PDF
35. Applications of Molecular Size Detection in Column Chromatography
- Author
-
Claes, Paul, Fowell, Sue, Kenney, Andrew, Vardy, Penny, Woollin, Caroline, and Pyle, D. L., editor
- Published
- 1990
- Full Text
- View/download PDF
36. Phycobilisome isolation and C-phycocyanin purification from the cyanobacterium Aphanizomenon gracile
- Author
-
A. Barriga, T. Bustamante, R. Piron, and N. Lagos
- Subjects
0106 biological sciences ,biology ,Physiology ,Chemistry ,Chemical structure ,Phycobiliprotein ,04 agricultural and veterinary sciences ,Plant Science ,Chromophore ,Conjugated system ,01 natural sciences ,Tetrapyrrole ,lcsh:QK1-989 ,chemistry.chemical_compound ,Biochemistry ,mass spectrometry ,protein chromatography ,protein cross-linking ,lcsh:Botany ,040103 agronomy & agriculture ,biology.protein ,0401 agriculture, forestry, and fisheries ,Phycobilisome ,Linker ,Phycoerythrin ,010606 plant biology & botany - Abstract
Cyanobacterial phycobilisomes are made up from phycobiliproteins held together by linker proteins. Incident photons are absorbed by the phycobiliproteins that carry linear tetrapyrrole chromophores with extended conjugated bond systems. The chemical structure of the chromophores also bestows the phycobiliproteins with excellent radical scavenging and antioxidant properties and phycobiliproteins have pharmaceutical value as such. We purified and characterized the phycobilisome and its major protein constituent C-phycocyanin from the freshwater filamentous cyanobacterium Aphanizomenon gracile. Isolated phycobilisomes were shown to be intact and contained the phycobiliproteins allophyco-cyanin and C-phycocyanin, but not phycoerythrin, together with the classic set of linker proteins. C-phycocyanin could be easily purified and was of analytical grade with spectral characteristics similar to that of other cyanobacterial species. To our best knowledge, this is the first study to report the purification and characterization of the Aphanizomenon gracile phycobilisome and C-phycocyanin.
- Published
- 2019
37. Vpliv temperature na ločbo bioloških makromolekul
- Author
-
Bavčar, Mojca and Pompe, Matevž
- Subjects
insulin ,cytochrome ,BSA ,lizocim ,protein chromatography ,nelinearni van't Hoffov graf ,citokrom ,lysozyme ,kromatografija proteinov ,non-linear van't Hoff plot - Abstract
Reverznofazna kromatografija poleg analize proteinov omogoča tudi vpogled v mehanizem interakcije proteina s hidrofobno površino in ali ta vključuje procese, kot je sprememba njegove konformacije. Za štiri proteine (insulin, citokrom c, lizocim in BSA) sem preučila vpliv temperature na retencijsko obnašanje na reverznofazni koloni C18. Analiza insulina v šestih kombinacijah organske (ACN, MeOH, EtOH) in vodne faze (0.1 % TFA, 0.1 M KCl) je pokazala, da ima izbira organske komponente mobilne faze največji vpliv na temperaturno odvisnost retencijskega časa. Primerjala sem retencijsko obnašanje insulina in citokroma c v dveh mobilnih fazah, 0.1 % TFA-ACN (70:30) in 0.1 % TFA-MeOH (44:56), pri konstantnem pretoku in tlaku. Van't Hoffovi grafi in iz njih izračunane termodinamske količine kažejo, da se v molekuli insulina v TFA-ACN pri ~ 53 °C začnejo večje konformacijske spremembe, medtem ko do teh v TFA-MeOH prihaja že pri nižjih temperaturah. Podobno so večje konformacijske spremembe citokroma c v TFA-ACN prisotne pri nižjih temperaturah, v TFA-MeOH pa do teh ne prihaja. Lizocim in BSA sem analizirala z gradientno metodo 0.1 % TFA-ACN. Trendi retencijskih časov kažejo, da tudi v teh dveh proteinih prihaja do konformacijskih sprememb. In addition to protein analysis, reversed-phase chromatography also provides insight into mechanism of interaction between protein and hydrophobic surface and whether it includes processes such as change of protein conformation. I studied influence of temperature on retention behaviour of four proteins (insulin, cytochrome c, lysozyme and BSA) on reversed-phase C18 column. Analysis of insulin in six combinations of organic (ACN, MeOH, EtOH) and aqueous phases (0.1 % TFA, 0.1 M KCl) indicates that choice of organic component of mobile phase has greatest influence on temperature dependence of retention time. I compared retention behaviour of insulin and cytochrome c in two mobile phases, 0.1 % TFA-ACN (70:30) and 0.1 % TFA-MeOH (44:56) at constant flow and pressure. Van't Hoff plots and thermodynamic quantities calculated from them indicate that significant conformational changes in insulin molecule in TFA-ACN begin at ~ 53 °C, while these are already present at lower temperatures in TFA-MeOH. Similarly, significant conformational changes of cytochrome c in TFA-ACN are present at lower temperatures, but do not occur in TFA-MeOH. Lysozyme and BSA were analysed with gradient method 0.1 % TFA-ACN. Trends in retention times indicate that conformational changes occur in these two proteins as well.
- Published
- 2021
38. Comparison of analytical protein separation characteristics for three amine-based capillary-channeled polymer (C-CP) stationary phases.
- Author
-
Jiang, Liuwei and Marcus, R.
- Subjects
- *
PROTEIN fractionation , *CROSSLINKING (Polymerization) , *BUTANEDIOL , *HYDROPHOBIC interactions , *POLYAMIDES - Abstract
Capillary-channeled polymer (C-CP) fiber stationary phases are finding utility in the realms of protein analytics as well as downstream processing. We have recently described the modification of poly(ethylene terephthalate) (PET) C-CP fibers to affect amine-rich phases for the weak anion-exchange (WAX) separation of proteins. Polyethylenimine (PEI) is covalently coupled to the PET surface, with subsequent cross-linking imparted by treatment with 1,4-butanediol diglycidyl ether (BUDGE). These modifications yield vastly improved dynamic binding capacities over the unmodified fibers. We have also previously employed native (unmodified) nylon 6 C-CP fibers as weak anion/cation-exchange (mixed-mode) and hydrophobic interaction chromatography (HIC) phases for protein separations. Polyamide, nylon 6, consists of amide groups along the polymer backbone, with primary amines and carboxylic acid end groups. The analytical separation characteristics of these three amine-based C-CP fiber phases are compared here. Each of the C-CP fiber columns in this study was shown to be able to separate a bovine serum albumin/hemoglobin/lysozyme mixture at high mobile phase linear velocity (∼70 mm s) but with different elution characteristics. These differences reflect the types of protein-surface interactions that are occurring, based on the active group composition of the fiber surfaces. This study provides important fundamental understanding for the development of surface-modified C-CP fiber columns for protein separation. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
39. Characterization of lysozyme adsorption in cellulosic chromatographic materials using small-angle neutron scattering.
- Author
-
Koshari, Stijn H.S., Wagner, Norman J., and Lenhoff, Abraham M.
- Subjects
- *
LYSOZYMES , *ADSORPTION (Chemistry) , *CHROMATOGRAPHIC analysis , *SMALL-angle neutron scattering , *NANOCHEMISTRY , *SORBENTS , *PROTEIN analysis - Abstract
Measurements of the nanoscale structure of chromatographic adsorbents and the associated distribution of sorbed protein within the media can facilitate improvements in such media. We demonstrate a new technique for this purpose using small-angle neutron scattering (SANS) to characterize the nano- to microscale structure of the chromatographic media and sorbed protein under conditions relevant for preparative chromatographic separations. The adsorption of lysozyme on cellulosic S HyperCel™ (Pall Corporation), a strong cation exchanger, was investigated by SANS. The scattering spectrum is reduced to three contributions arising from (1) the chromatographic medium, (2) discrete protein molecules, and (3) the distribution of sorbed protein within the medium. These contributions are quantified for a range of protein loadings. The total concentration of protein in the chromatographic media can be quantified from the SANS spectrum and the protein is observed to retain its tertiary structure upon adsorption, within the resolution of the method. Further analysis of the SANS spectra shows that protein adsorption is uniform in the media. These measurement techniques provide new and valuable nanoscale information about protein sorption in chromatographic media. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
40. Applications of microcapillary films in bioanalytical techniques
- Author
-
Zhongbin Xu, Yan Shan, Xing Huang, and Junfeng Liu
- Subjects
Immunoassay ,Male ,Bioanalysis ,Materials science ,Manufacturing process ,Microfluidics ,Proteins ,Nanotechnology ,Biochemistry ,Analytical Chemistry ,Escherichia coli detection ,Urinary Tract Infections ,Electrochemistry ,Environmental Chemistry ,Surface modification ,Humans ,Multiplex ,Protein chromatography ,Plastics ,Spectroscopy - Abstract
Microcapillary film (MCF) is an extruded plastic film with an array of parallel microcapillaries (30-500 μm) and it has wide potential applications in bioanalytical techniques as a microfluidic platform. With different surface modification strategies, an MCF combines the advantages of its structure and modified chemical properties to realize various bioanalytical functions. In this review, we begin by introducing the manufacturing process of MCFs, common materials used to produce MCFs, surface treatment approaches of inner surfaces, and a signal detection and readout system of the MCF platform. Then, we summarize some typical applications of MCFs, particularly in protein chromatography, Escherichia coli detection for urinary tract infections, prostate-specific antigen detection for prostate cancer and multiplex immunoassays. Finally, future perspectives of MCFs in bioanalytical techniques are discussed.
- Published
- 2021
41. Bimodal Gigaporous Polystyrene Microspheres with Glycopolymer Surfaces for High-Speed Protein Chromatography
- Author
-
Jing Li, Xinyi Sui, Jingbin Zeng, Huanjie Che, Jian-Bo Qu, Bing-Qi Zhu, and Yue Li
- Subjects
chemistry.chemical_compound ,Adsorption ,Chromatography ,Resolution (mass spectrometry) ,chemistry ,Permeability (electromagnetism) ,Glycopolymer ,Phase (matter) ,Protein chromatography ,Polystyrene ,Derivatization ,Spectroscopy ,Analytical Chemistry - Abstract
A bimodal gigaporous anion-exchange medium was successfully developed based on hydrophilic gigaporous polystyrene (HGPS) microspheres that prepared previously. After derivatization, the gigaporous structure of HGPS microspheres was well maintained. The presence of flow-through pores in the medium can induce convective flow of mobile phase within microspheres, therefore contributing to high column permeability (3.55×10-10 m2), high dynamic adsorption capacity and high protein resolution at high flow velocities. The mixture of hemoglobin, transferrin and ovalbumin can be baseline separated within 3 minutes at 2529 cm/h. All the results indicate that anion-exchange medium as developed is very promising for large scale high-speed protein chromatography.
- Published
- 2021
- Full Text
- View/download PDF
42. Nitroreductase Activites in Giardia lamblia: ORF 17150 Encodes a Quinone Reductase with Nitroreductase Activity
- Author
-
Müller, Joachim, Heller, Manfred, Uldry, Anne-Christine, Braga, Sophie, and Müller, Norbert
- Subjects
functional assays ,630 Agriculture ,lcsh:R ,protein chromatography ,lcsh:Medicine ,570 Life sciences ,biology ,590 Animals (Zoology) ,610 Medicine & health ,anaerobic metabolism ,Article ,drug susceptibility ,mass spectrometry - Abstract
The intestinal diplomonadid Giardia lamblia is a causative agent of persistent diarrhea. Current treatments are based on nitro drugs, especially metronidazole. Nitro compounds are activated by reduction, yielding toxic intermediates. The enzymatic systems responsible for this activation are not completely understood. By fractionating cell free crude extracts by size exclusion chromatography followed by mass spectrometry, enzymes with nitroreductase (NR) activities are identified. The protein encoded by ORF 17150 found in two pools with NR activities is overexpressed and characterized. In pools of fractions with main NR activities, previously-known NRs are identified, as well as a previously uncharacterized protein encoded by ORF 17150. Recombinant protein 17150 is a flavoprotein with NADPH-dependent quinone reductase and NR activities. Besides a set of previously identified NRs, we have identified a novel enzyme with NR activity.
- Published
- 2021
- Full Text
- View/download PDF
43. Protein behavior at surfaces: Orientation, conformational transitions and transport.
- Author
-
Yu, Linling, Zhang, Lin, and Sun, Yan
- Subjects
- *
PROTEIN conformation , *PROTEIN transport , *PROTEIN folding , *SURFACE diffusion , *MASS transfer - Abstract
Chromatography is the key technology in protein purification as well as in protein refolding. Taking the scientific development and technological innovation of protein chromatography as the objective, this article is devoted to an overview of protein behavior at chromatographic surfaces, including protein orientation, conformational transitions (unfolding and refolding), and protein transport. Recent advances achieved by using molecular simulations as well as theoretical and experimental investigations are elaborated and discussed with emphasis on their implications to the rational design of novel chromatographic surfaces or materials and mobile phase conditions for the development of high-performance protein chromatography. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
44. Predictions of matrix-assisted refolding of α-lactalbumin: Process efficiency versus batch dilution method.
- Author
-
Ryś, Sylwia, Piątkowski, Wojciech, and Antos, Dorota
- Subjects
- *
PROTEIN folding , *RECOMBINANT proteins , *ION exchange chromatography , *LACTALBUMIN , *ANALYTICAL mechanics - Abstract
Protein refolding is an important technique to produce active recombinant proteins from inclusion bodies. Because of the complexity of the refolding process, a trial-and-error method is usually used for its design, which is ineffective and time consuming. Therefore, an efficient method for the process prediction is indispensable to optimize the operating conditions. In this article, we suggest a design procedure for matrix-assisted protein refolding. Three different chromatographic techniques were considered exploiting hydrophobic interaction chromatography, ion-exchange chromatography, and SEC media. The procedure consisted of quantification of refolding kinetics, analysis of the retention behavior of all protein forms involved in refolding, construction of a dynamic model, and the process simulation. Denatured bovine α-lactalbumin was used as model protein. The refolding rate was measured for different protein concentration using the batch dilution method. A kinetic scheme for the protein refolding was suggested and incorporated into a dynamic model of chromatographic column and used for predicting the refolding performance. The productivity, yield, and buffer consumption were used as performance indicators for the refolding techniques considered. The matrix-assisted protein refolding process outperformed batch dilution method with respect to all indicators provided that efficient method for the process design was used. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
45. Preparation and characterization of a thermoresponsive gigaporous medium for high-speed protein chromatography.
- Author
-
Qu, Jian-Bo, Chen, Yan-Li, Huan, Guan-Sheng, Zhou, Wei-Qing, Liu, Jian-Guo, Zhu, Hu, and Zhang, Xiao-Yun
- Subjects
- *
POLYSTYRENE , *POLYMERIZATION , *PROTEIN analysis , *CHROMATOGRAPHIC analysis , *MICROSPHERES , *MASS transfer , *CHEMICAL stability - Abstract
A high-speed thermoresponsive medium was developed by grafting poly( N -isopropylacrylamide- co -butyl methacrylate) (P(NIPAM- co -BMA)) brushes onto gigaporous polystyrene (PS) microspheres via surface-initiated atom transfer radical polymerization (ATRP) technique, which has strong mechanical strength, good chemical stability and high mass transfer rate for biomacromolecules. The gigaporous structure, surface chemical composition, static protein adsorption, and thermoresponsive chromatographic properties of prepared medium (PS–P(NIPAM- co -BMA)) were characterized in detail. Results showed that the PS microspheres were successfully grafted with P(NIPAM- co -BMA) brushes and that the gigaporous structure was robustly maintained. After grafting, the nonspecific adsorption of proteins on PS microspheres was greatly reduced. A column packed with PS–P(NIPAM- co -BMA) exhibited low backpressure and significant thermo-responsibility. By simply changing the column temperature, it was able to separate three model proteins at the mobile phase velocity up to 2167 cm h −1 . In conclusion, the thermoresponsive polymer brushes grafted gigaporous PS microspheres prepared by ATRP are very promising in ‘green’ high-speed preparative protein chromatography. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
46. Multiscale modeling of protein adsorption and transport in macroporous and polymer-grafted ion exchangers.
- Author
-
Basconi, Joseph E., Carta, Giorgio, and Shirts, Michael R.
- Subjects
ADSORPTION (Chemistry) ,MASS transfer ,MASS density gradients ,MOLECULAR dynamics ,ION exchange chromatography ,POROUS materials - Abstract
A multiscale model is presented to elucidate protein adsorption and transport behaviors in ion-exchange chromatography (IEC) adsorbent particles that have either an open pore structure or charged dextran polymers grafted into the pores. Molecular dynamics simulation is used to determine protein diffusion and partitioning in different regions of the adsorbent pore, and these outputs are used in numerical simulations of mass transfer to determine the intraparticle protein concentration profile and the mass-transfer rate. Modeling results indicate that, consistent with experimental observations, protein transport can be faster in the polymer-grafted material compared to the open pore case. This occurs when favorable partitioning of protein into the polymer-filled pore space is combined with relatively high protein mobility within this region. The modeling approach presented here should be applicable to proteins and adsorbents with different properties, and could help elucidate the factors that control adsorption and transport in various IEC systems. © 2014 American Institute of Chemical Engineers AIChE J, 60: 3888-3901, 2014 [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
47. Coating of nanoparticles on cryogel surface and subsequent double-modification for enhanced ion-exchange capacity of protein.
- Author
-
Tao, Shi-Peng, Wang, Chuan, and Sun, Yan
- Subjects
- *
METAL coating , *SURFACE chemistry , *METAL nanoparticles , *PROTEIN analysis , *COMPOSITE materials , *SCANNING electron microscopy - Abstract
A novel composite cryogel monolith was developed by coating poly(glycidyl methacrylate) nanoparticles (NPs) onto the pore wall surface of poly(acrylamide) cryogel. The NPs-coated column was double-modified with poly(ethylenimine) (PEI) and diethylaminoethyl in sequence. Scanning electron microscopy revealed the dense coating of the NPs on the cryogel surface, but the NPs-coating did not result in distinct changes of the column porosity and permeability. The rough pore wall surface and extended polymer chains offered more binding sites, so the dynamic binding capacity of the composite cryogel bed for bovine serum albumin reached 11.7 mg/mL bed volume at a flow rate of 6 cm/min, which was 4.2 times higher than that of the cryogel bed modified with PEI without coating NPs (2.8 mg/mL). The binding capacity as well as column efficiency decreased only slightly with increasing flow rate from 0.6 to 12 cm/min. The results indicated that the strategy of NPs-coating incorporating with double ion-exchanger modifications is promising for enhancing cryogel capacities, and the novel material would be useful for high-speed protein chromatography. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
48. High capacity cryogel-type adsorbents for protein purification.
- Author
-
Singh, Naveen Kumar, Dsouza, Roy N., Grasselli, Mariano, and Fernández-Lahore, Marcelo
- Subjects
- *
SORBENTS , *PROTEIN analysis , *EPOXY compounds , *COPOLYMERIZATION , *IRRADIATION , *DIETHYLAMINOETHANOL , *ION exchange resins - Abstract
Cryogel bodies were modified to obtain epoxy groups by graft-copolymerization using both chemical and gamma irradiation initiation techniques. The free epoxy adsorbents were reacted further to introduce diethylaminoethanol (DEAE) functionalities. The resulting weak anion-exchange cryogel adsorbents showed dynamic binding capacities of ca. 27±3mg/mL, which was significantly higher than previously reported for this type of adsorbent material. Gamma irradiated grafting initiation showed a 4-fold higher capacity for proteins than chemical grafting initiation procedures. The phosphate capacity for these DEAE cryogels was 119mmol/L and also showed similar column efficiency as compared to commercial adsorbents. The large pores in the cryogel structure ensure convective transport of the molecules to active binding sites located on the polymer-grafted surface of cryogels. However, as cryogels have relatively large pores (10-100µm), the BET area available for surface activation is low, and consequently, the capacity of the cryogels is relatively low for biomolecules, especially when compared to commercial beaded adsorbents. Nevertheless, we have shown that gamma ray mediated surface grafting of cryogel matrices greatly enhance their functional and adsorptive properties. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
49. Evaluation of steric exclusion chromatography on cryogel column for the separation of serum proteins.
- Author
-
Wang, Chuan, Bai, Shu, Tao, Shi-Peng, and Sun, Yan
- Subjects
- *
GEL permeation chromatography , *COLUMNS , *BLOOD proteins , *SEPARATION (Technology) , *PRECIPITATION (Chemistry) , *GLOBULINS - Abstract
Highlights: [•] Steric exclusion chromatography was evaluated on cryogel monolith column. [•] The retention capacity of the cryogel column for γ-globulin reached 20mg/mL. [•] Compact packing of protein precipitates on the cryogel surface was revealed by SEM. [•] Primary separation of serum proteins was achieved with concentrated γ-globulin. [Copyright &y& Elsevier]
- Published
- 2014
- Full Text
- View/download PDF
50. Online Hydrophobic Interaction Chromatography–Mass Spectrometry for the Analysis of Intact Monoclonal Antibodies
- Author
-
Bifan Chen, Ying Ge, Qunying Zhang, Ziqing Lin, Cexiong Fu, Andrew J. Alpert, and Wayne A. Pritts
- Subjects
0301 basic medicine ,Glycosylation ,medicine.drug_class ,Monoclonal antibody ,Mass spectrometry ,01 natural sciences ,Article ,Mass Spectrometry ,Fourier transform ion cyclotron resonance ,Analytical Chemistry ,03 medical and health sciences ,chemistry.chemical_compound ,medicine ,Humans ,Chromatography ,Electron-capture dissociation ,Chemistry ,Extramural ,Hydrophilic interaction chromatography ,010401 analytical chemistry ,Antibodies, Monoclonal ,0104 chemical sciences ,030104 developmental biology ,Protein chromatography ,Hydrophobic and Hydrophilic Interactions ,Chromatography, Liquid - Abstract
Therapeutic monoclonal antibodies (mAbs) are an important class of drugs for a wide spectrum of human diseases. Liquid chromatography (LC) coupled to mass spectrometry (MS) is one of the techniques in the forefront for comprehensive characterization of analytical attributes of mAbs. Among various protein chromatography modes, hydrophobic interaction chromatography (HIC) is a popular offline nondenaturing separation technique utilized to purify and analyze mAbs, typically with the use of non-MS-compatible mobile phases. Herein we demonstrate for the first time, the application of direct HIC-MS and HIC-tandem MS (MS/MS) with electron capture dissociation (ECD) for analyzing intact mAbs on quadrupole-time-of-flight (Q-TOF) and Fourier transform ion cyclotron resonance (FTICR) mass spectrometers, respectively. Our method allows for rapid determination of relative hydrophobicity, intact masses, and glycosylation profiles of mAbs as well as sequence and structural characterization of the complementarity-determining regions in an online configuration.
- Published
- 2018
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.