1,408 results on '"survival prediction"'
Search Results
2. Predicting survival, neurotoxicity and response in B-cell lymphoma patients treated with CAR-T therapy using an imaging features-based model.
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Ferrer-Lores, Blanca, Ortiz-Algarra, Alfonso, Picó-Peris, Alfonso, Estepa-Fernández, Alejandra, Bellvís-Bataller, Fuensanta, Weiss, Glen J., Fuster-Matanzo, Almudena, Fernández, Juan Pedro, Jimenez-Pastor, Ana, Hernani, Rafael, Saus-Carreres, Ana, Benzaquen, Ana, Ventura, Laura, Piñana, José Luis, Teruel, Ana Belén, Serrano-Alcalá, Alicia, Dosdá, Rosa, Sopena-Novales, Pablo, Balaguer-Rosello, Aitana, and Guerreiro, Manuel
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NON-Hodgkin's lymphoma , *PREDICTION models , *PROGNOSTIC models , *REGRESSION analysis , *RADIOMICS , *SURVIVAL analysis (Biometry) , *PROGRESSION-free survival - Abstract
Background: This multicentre retrospective observational study aims to develop imaging-based prognostic and predictive models for relapsed/refractory (R/R) B-cell lymphoma patients undergoing CAR-T therapy by integrating clinical data and imaging features. Specifically, our aim was to predict 3- and 6-month treatment response, overall survival (OS), progression-free survival (PFS), and the occurrence of the immune effector cell-associated neurotoxicity syndrome (ICANS). Results: Sixty-five patients of R/R B-cell lymphoma treated with CAR-T cells in two centres were included. Pre-infusion [18F]FDG PET/CT scans and clinical data were systematically collected, and imaging features, including kurtosis, entropy, maximum diameter, standardized uptake value (SUV) related features (SUVmax, SUVmean, SUVstd, SUVmedian, SUVp25, SUVp75), total metabolic tumour volume (MTVtotal), and total lesion glycolysis (TLGtotal), were extracted using the Quibim platform. The median age was 62 (range 21–76) years and the median follow-up for survivors was 10.47 (range 0.20–45.80) months. A logistic regression model accurately predicted neurotoxicity (AUC: 0.830), and Cox proportional-hazards models for CAR-T response at 3 and 6 months demonstrated high accuracy (AUC: 0.754 and 0.818, respectively). Median predicted OS after CAR-T therapy was 4.73 months for high MTVtotal and 37.55 months for low MTVtotal. Median predicted PFS was 2.73 months for high MTVtotal and 11.83 months for low MTVtotal. For all outcomes, predictive models, combining imaging features and clinical variables, showed improved accuracy compared to models using only clinical variables or imaging features alone. Conclusion: This study successfully integrates imaging features and clinical variables to predict outcomes in R/R B-cell lymphoma patients undergoing CAR-T. Notably, the identified MTVtotal cut-off effectively stratifies patients, as evidenced by significant differences in OS and PFS. Additionally, the predictive models for neurotoxicity and CAR-T response show promising accuracy. This comprehensive approach holds promise for risk stratification and personalized treatment strategies which may become a helpful tool for optimizing CAR-T outcomes in R/R lymphoma patients. [ABSTRACT FROM AUTHOR]
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- 2024
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3. Survival models and longitudinal medical events for hospital readmission forecasting.
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Davis, Sacha and Greiner, Russell
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ARTIFICIAL neural networks , *PATIENT readmissions , *HOSPITAL admission & discharge , *MEDICAL coding , *SURVIVAL analysis (Biometry) - Abstract
Background: The rate of 30-day all-cause hospital readmissions can affect the funding a hospital receives. An accurate and reliable readmission prediction model could save money and increase quality-of-care. Few projects have explored formulating this task as a survival prediction problem, where models can exploit a real-valued time-to-readmission target. This paper demonstrates the effectiveness of a survival-inspired readmission model, especially when paired with a longitudinal patient representation that is agnostic to disease-cohort and predictive task. Methods: We forecast readmissions for a population-level cohort of 421,088 patients discharged in 2015 and 2016 from hospitals in Alberta, Canada. Clinical features and sequences of historical medical codes (calculated from at least four full years prior to discharge) from linked administrative sources serve as model inputs. We trained binary 30-day readmission models (XGBoost and a Deep Neural Network) and time-to-event readmission models (CoxPH and N-MTLR) with and without machine-learned medical knowledge at initialization, then compared against the popular LACE-based model using the AUROC score at 30 days (AUROC@30). Survival models are additionally evaluated using concordance, Integrated Brier, and L1-loss scores. Results: All models that utilize sequence features markedly out-perform even the best models trained on only clinical features. Further, a time-to-event target improves predictive performance at 30 days, given the same model inputs and architecture. N-MTLR, using solely sequence inputs and initialized with pre-learned medical knowledge, achieves an average AUROC@30 of 0.8460 over five folds with a standard deviation of 0.003. All trained models match or out-perform the LACE baseline of 0.6587±0.003. Conclusion: Sequences of administrative medical codes contain rich predictive information for forecasting readmissions, and embedding medical knowledge a priori using machine learning provides readmission models an advantageous foundation for training. When combined with a model that can leverage a time-to-event target, excellent performance is possible on the 30-day all-cause readmission task using only administrative data. [ABSTRACT FROM AUTHOR]
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- 2024
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4. Prognostic Nomogram for Predicting Survival in Asian Patients With Small‐Cell Lung Cancer: A Comprehensive Population‐Based Study and External Verification.
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Xia, Yuanli, Qu, Jingjing, Wang, Yufang, Zhu, Yanping, Zhou, Jianying, and Zhou, Jianya
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SMALL cell lung cancer , *ASIANS , *DECISION making , *PROGNOSTIC models , *NOMOGRAPHY (Mathematics) - Abstract
Background: The incidence of small cell lung cancer (SCLC) among Asian patients is on the rise. Nevertheless, there remains a deficiency in precise prognostic models tailored to the specific needs of this patient population. It is imperative to develop a novel nomogram aimed at forecasting the prognosis of Asian SCLC patients. Methods: The SEER database supplied data on 661 Asian SCLC patients, who were then divided into training and internal validation sets through a random selection process. In addition, we identified 212 patients from a Chinese medical institution for the purpose of creating an external validation cohort. To forecast survival, we employed both univariate and multivariate analyses. The performance of our nomogram was assessed through calibration plots, the concordance index (C‐index), and decision curve analysis (DCA). Results: Five independent prognostic factors were determined and integrated into the nomogram. C‐index values for the training and internal validation cohorts were 0.774 (95% confidence interval [CI] = 0.751–0.797) and 0.731 (95%CI = 0.690–0.772), respectively. In the external validation cohort, the C‐index is 0.712 (95% CI = 0.655–0.7692). Calibration curves demonstrated highly accurate predictions. When compared to the AJCC staging system, our model exhibited improved net benefits in DCA. Furthermore, the risk stratification system effectively differentiated patients with varying survival risks. Conclusion: We have created a novel nomogram for predicting the survival of Asian patients with SCLC. This nomogram has been subjected to external validation and has shown its superiority over the conventional TNM staging system. It offers a more precise and reliable means of forecasting the prognosis of Asian SCLC patients. [ABSTRACT FROM AUTHOR]
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- 2024
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5. Imbalanced survival prediction for gastric cancer patients based on improved XGBoost with cost sensitive and focal loss.
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Xu, Liangchen and Guo, Chonghui
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STOMACH cancer , *CANCER prognosis , *CANCER patients , *MEDICAL research , *PREDICTION models , *SURVIVAL analysis (Biometry) - Abstract
Accurate prediction of gastric cancer survival state is one of great significant tasks for clinical decision‐making. Many advanced machine learning classification techniques have been applied to predict the survival status of cancer patients in three or 5 years, however, many of them have a low sensitivity because of class imbalance. This is a non‐negligible problem due to the poor prognosis of gastric cancer patients. Furthermore, models in the medical domain require strong interpretability to increase their applicability. Due to the better performance and interpretability of the XGBoost model, we design a loss function taking into account cost sensitive and focal loss from the algorithm level for XGBoost to deal with the imbalance problem. We apply the improved model into the prediction of the survival status of gastric cancer patients and analyse the important related features. We use two types of indicators to evaluate the model, and we also design the confusion matrix of two models' predictive results to compare two models. The results show that the improved model has better performance. Furthermore, we calculate the importance of features related to survival with three different time periods and analyse their evolution, which are consistent with existing clinical research or further expand their research conclusions. These all support for clinically relevant decision‐making and has the potential to expand into survival prediction of other cancer patients. [ABSTRACT FROM AUTHOR]
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- 2024
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6. Enhancing Machine Learning Models Through PCA, SMOTE-ENN, and Stochastic Weighted Averaging.
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Han, Youngjin and Joe, Inwhee
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PRINCIPAL components analysis ,SUPPORT vector machines ,SURVIVAL rate ,DATA management ,PREDICTION models - Abstract
Predicting survival outcomes in critical accidents has been a focal point in machine learning research. This study addresses several limitations of existing methods, including insufficient management of data imbalance, lack of emphasis on hyperparameter tuning, and proneness to overfitting. Many existing models struggle to generalize effectively on imbalanced datasets or depend on default hyperparameter settings, resulting in biased predictions. By integrating Principal Component Analysis (PCA), hyperparameter optimization, and resampling methods, as well as combining Edited Nearest Neighbors (ENN) with the Synthetic Minority Oversampling Technique (SMOTE), the model significantly improves predictive accuracy and model generalization. An ensemble model combining seven machine learning algorithms—Logistic Regression, Support Vector Machine, KNN, Random Forest, XGBoost, LightGBM, and CatBoost—was applied to predict survival outcomes. Stochastic Weighted Averaging (SWA) was applied to mitigate overfitting and enhance generalization. The accuracy increased from 91.97% to 94.89% after SWA was applied in this specific scenario. The combination of PCA-based dimensionality reduction, hyperparameter tuning, and resampling techniques (ENN + SMOTE) ensured the model handled data imbalance and optimized predictive accuracy. The final model demonstrated excellent performance, with Area Under the Curve (AUC) and Average Precision (AP) values both reaching 0.98, indicating high accuracy and precision. These improvements were validated using the Titanic dataset in a binary classification problem of predicting passenger survival. The results emphasize that ensemble learning, enhanced by SWA, offers a powerful framework for handling imbalanced and complex datasets, providing significant advancements in predictive modeling accuracy. This study provides insights into how machine learning techniques can be effectively combined to solve classification challenges in real-world scenarios. [ABSTRACT FROM AUTHOR]
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- 2024
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7. Deep-SEA: a deep learning based patient specific multi-modality post-cancer survival estimation architecture.
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Ahmad, Ibtihaj and Riaz, Saleem
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CONSTRUCTION management ,RADIOLOGY ,CANCER relapse ,MACHINE learning ,PATIENT care ,DEEP learning - Abstract
Cancer survival estimation is essential for post-cancer patient care, cancer management policy building, and the development of tailored treatment plans. Existing survival estimation methods use censored data; therefore, standard machine learning methods can not be used directly. Some censoring-based semi-machine learning methods have recently been proposed; however, these methods pose challenges. They are less patient-specific and non-linear. Furthermore, they rely on single-modality features. These drawbacks result in lower survival estimation performance. To address these issues, this work proposes a framework named Deep-SEA. Compared to the state-of-the-art, Deep-SEA uses multi-modality features, i.e., clinical, radiology, and histology features. These features are analyzed with statistical methods, and only significant features are selected. Then, the baseline hazard of the Cox model is estimated using Breslow's estimator, which is optimized using stochastic gradient descent. Finally, the risk function, i.e., the parameters of our model, are estimated via an ANN with time as additional input. ANN makes it non-linear while training on the patient-specific features makes it more patient-specific than the state-of-the-art. We train and evaluate Deep-SEA on five datasets, including head, neck, and colorectal-liver cancer. We have achieved a Concordance-index (C-index) score of 0.7181, the highest compared to the state-of-the-art. Results and ablation studies on Deep-SEA suggest that the proposed method improves cancer survival estimation and can be applied to other estimations, such as cancer recurrence estimation. [ABSTRACT FROM AUTHOR]
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- 2024
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8. Creating an interactive database for nasopharyngeal carcinoma management: applying machine learning to evaluate metastasis and survival.
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Yanbo Sun, Jian Tan, Cheng Li, Di Yu, and Wei Chen
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MACHINE learning ,OVERALL survival ,RANDOM forest algorithms ,DATABASES ,NASOPHARYNX cancer - Abstract
Objective: Nasopharyngeal carcinoma (NPC) patients frequently present with distant metastasis (DM), which is typically associated with poor prognosis. This study aims to develop and apply machine learning models to predict DM, overall survival (OS), and cancer-specific survival (CSS) in NPC patients to provide optimal tools for improved predictive accuracy and performance. Methods: We retrieved over 8,000 NPC patient samples with associated clinical information from the Surveillance, Epidemiology, and End Results (SEER) database. Utilizing two methods for handling missing values--imputation or deletion--we created various cohorts: DM-all, DM-slim, OS-all, OS-slim, CSSall, and CSS-slim. Five machine learning models were deployed for the binary classification task of DM, and their performance was evaluated using the area under the curve (AUC). For the survival prediction tasks of OS and CSS, we constructed 45 combinations using nine survival machine learning algorithms. The Concordance Index (C-index), 5-year AUC, and Brier score assessed model accuracy. Patients were stratified into two risk groups for survival analysis, and the survival curves were presented. Results: This study examines the relationships between clinical factors and survival in NPC patients. The analysis, visualized through forest plots, indicates that demographic and clinical variables like gender, marital status, tumor grade, and stage significantly affect metastatic risks and survival. Specifically, factors such as advanced stages increase metastasis and survival risks, while enhanced treatments improve survival rates. In the cohort for DM prediction, results revealed that the random forest model was the most effective, with an AUC of 0.687. In contrast, when predicting overall survival (OS), the random survival forest (RSF) model consistently showed superior performance with the highest mean C-index of 0.802, a 5-year AUC of 0.857, and a Brier score of 0.167. Similarly, for cancer-specific survival (CSS) prediction, the RSF model demonstrated a mean C-index of 0.822, a 5-year AUC of 0.884, and a Brier score of 0.165. An online Shiny server was developed to allow the models to be used freely and efficiently via http://npcml.shinyapps.io/NPCpre. Conclusion: This study successfully established an online tool by machine learning models for NPC metastasis and survival prediction, providing valuable references for clinicians. [ABSTRACT FROM AUTHOR]
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- 2024
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9. Predicting Survival Status in COVID-19 Patients: Machine Learning Models Development with Ventilator-Related and Biochemical Parameters from Early Stages: A Pilot Study.
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Chou, Shin-Ho, Tsai, Cheng-Yu, Hsu, Wen-Hua, Chung, Chi-Li, Li, Hsin-Yu, Chen, Zhihe, Chien, Rachel, and Cheng, Wun-Hao
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MACHINE learning , *VENTILATOR weaning , *COVID-19 , *PARTIAL pressure , *C-reactive protein - Abstract
Objective: Coronavirus disease 2019 (COVID-19) can cause intubation and ventilatory support due to respiratory failure, and extubation failure increases mortality risk. This study, therefore, aimed to explore the feasibility of using specific biochemical and ventilator parameters to predict survival status among COVID-19 patients by using machine learning. Methods: This study included COVID-19 patients from Taipei Medical University-affiliated hospitals from May 2021 to May 2022. Sequential data on specific biochemical and ventilator parameters from days 0–2, 3–5, and 6–7 were analyzed to explore differences between the surviving (successfully weaned off the ventilator) and non-surviving groups. These data were further used to establish separate survival prediction models using random forest (RF). Results: The surviving group exhibited significantly lower mean C-reactive protein (CRP) levels and mean potential of hydrogen ions levels (pH) levels on days 0–2 compared to the non-surviving group (CRP: non-surviving group: 13.16 ± 5.15 ng/mL, surviving group: 10.23 ± 5.15 ng/mL; pH: non-surviving group: 7.32 ± 0.07, survival group: 7.37 ± 0.07). Regarding the survival prediction performanace, the RF model trained solely with data from days 0–2 outperformed models trained with data from days 3–5 and 6–7. Subsequently, CRP, the partial pressure of carbon dioxide in arterial blood (PaCO2), pH, and the arterial oxygen partial pressure to fractional inspired oxygen (P/F) ratio served as primary indicators in survival prediction in the day 0–2 model. Conclusions: The present developed models confirmed that early biochemical and ventilatory parameters—specifically, CRP levels, pH, PaCO2, and P/F ratio—were key predictors of survival for COVID-19 patients. Assessed during the initial two days, these indicators effectively predicted the likelihood of successful weaning of from ventilators, emphasizing their importance in early management and improved outcomes in COVID-19-related respiratory failure. [ABSTRACT FROM AUTHOR]
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- 2024
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10. Enhanced ovarian cancer survival prediction using temporal analysis and graph neural networks.
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Ghantasala, G. S. Pradeep, Dilip, Kumar, Vidyullatha, Pellakuri, Allabun, Sarah, Alqahtani, Mohammed S., Othman, Manal, Abbas, Mohamed, and Soufiene, Ben Othman
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GRAPH neural networks , *DEEP learning , *EMPLOYEE selection , *OVARIAN cancer , *CANCER prognosis - Abstract
Ovarian cancer is a formidable health challenge that demands accurate and timely survival predictions to guide clinical interventions. Existing methods, while commendable, suffer from limitations in harnessing the temporal evolution of patient data and capturing intricate interdependencies among different data elements. In this paper, we present a novel methodology which combines Temporal Analysis and Graph Neural Networks (GNNs) to significantly enhance ovarian cancer survival rate predictions. The shortcomings of current processes originate from their disability to correctly seize the complex interactions amongst diverse scientific information units in addition to the dynamic modifications that arise in a affected person's nation over time. By combining temporal information evaluation and GNNs, our cautioned approach overcomes those drawbacks and, whilst as compared to preceding methods, yields a noteworthy 8.3% benefit in precision, 4.9% more accuracy, 5.5% more advantageous recall, and a considerable 2.9% reduction in prediction latency. Our method's Temporal Analysis factor uses longitudinal affected person information to perceive good-sized styles and tendencies that offer precious insights into the direction of ovarian cancer. Through the combination of GNNs, we offer a robust framework able to shoot complicated interactions among exclusive capabilities of scientific data, permitting the version to realize diffused dependencies that would affect survival results. Our paintings have tremendous implications for scientific practice. Prompt and correct estimation of the survival price of ovarian most cancers allows scientific experts to customize remedy regimens, manipulate assets efficiently, and provide individualized care to patients. Additionally, the interpretability of our version's predictions promotes a collaborative method for affected person care via way of means of strengthening agreement among scientific employees and the AI-driven selection help system. The proposed approach not only outperforms existing methods but also has the possible to develop ovarian cancer treatment by providing clinicians through a reliable tool for informed decision-making. Through a fusion of Temporal Analysis and Graph Neural Networks, we conduit the gap among data-driven insights and clinical practice, proposing a capable opportunity for refining patient outcomes in ovarian cancer management operations. [ABSTRACT FROM AUTHOR]
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- 2024
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11. Predicting the survival of patients with painful tumours treated with palliative radiotherapy: a secondary analysis using the 3-variable number-of-risk-factors model.
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Sakurai, Takayuki, Saito, Tetsuo, Yamaguchi, Kohsei, Takamatsu, Shigeyuki, Kobayashi, Satoshi, Nakamura, Naoki, and Oya, Natsuo
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RECEIVER operating characteristic curves , *OVERALL survival , *SURVIVAL rate , *BONE metastasis , *SURVIVAL analysis (Biometry) - Abstract
Background: The 3-variable number-of-risk-factors (NRF) model is a prognostic tool for patients undergoing palliative radiotherapy (PRT). However, there is little research on the NRF model for patients with painful non-bone-metastasis tumours treated with PRT, and the efficacy of the NRF model in predicting survival is unclear to date. Therefore, we aimed to assess the prognostic accuracy of a 3-variable NRF model in patients undergoing PRT for bone and non- bone-metastasis tumours. Methods: This was a secondary analysis of studies on PRT for bone-metastasis (BM) and PRT for miscellaneous painful tumours (MPTs), including non-BM tumours. Patients were grouped in the NRF model and survival was compared between groups. Discrimination was evaluated using a time-independent C-index and a time-dependent area under the receiver operating characteristic curve (AUROC). A calibration curve was used to assess the agreement between predicted and observed survival. Results: We analysed 485 patients in the BM group and 302 patients in the MPT group. The median survival times in the BM group for groups I, II, and III were 35.1, 10.1, and 3.3 months, respectively (P < 0.001), while in the MPT group, they were 22.1, 9.5, and 4.6 months, respectively (P < 0.001). The C-index was 0.689 in the BM group and 0.625 in the MPT group. In the BM group, time-dependent AUROCs over 2 to 24 months ranged from 0.738 to 0.765, while in the MPT group, they ranged from 0.650 to 0.689, with both groups showing consistent accuracy over time. The calibration curve showed a reasonable agreement between the predicted and observed survival. Conclusions: The NRF model predicted survival moderately well in both the BM and MPT groups. [ABSTRACT FROM AUTHOR]
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- 2024
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12. Nomogram for predicting survival of older patients with primary ocular adnexal lymphoma.
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Cai, Youran, Du, Yi, and Zou, Wenjin
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- 2024
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13. ResMHA-Net: Enhancing Glioma Segmentation and Survival Prediction Using a Novel Deep Learning Framework.
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Rasool, Novsheena, Bhat, Javaid Iqbal, Aoun, Najib Ben, Alharthi, Abdullah, Wani, Niyaz Ahmad, Chopra, Vikram, and Anwar, Muhammad Shahid
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MACHINE learning ,FEATURE extraction ,MAGNETIC resonance imaging ,DEEP learning ,BRAIN tumors - Abstract
Gliomas are aggressive brain tumors known for their heterogeneity, unclear borders, and diverse locations on Magnetic Resonance Imaging (MRI) scans. These factors present significant challenges for MRI-based segmentation, a crucial step for effective treatment planning and monitoring of glioma progression. This study proposes a novel deep learning framework, ResNet Multi-Head Attention U-Net (ResMHA-Net), to address these challenges and enhance glioma segmentation accuracy. ResMHA-Net leverages the strengths of both residual blocks from the ResNet architecture and multi-head attention mechanisms. This powerful combination empowers the network to prioritize informative regions within the 3D MRI data and capture long-range dependencies. By doing so, ResMHA-Net effectively segments intricate glioma sub-regions and reduces the impact of uncertain tumor boundaries. We rigorously trained and validated ResMHA-Net on the BraTS 2018, 2019, 2020 and 2021 datasets. Notably, ResMHA-Net achieved superior segmentation accuracy on the BraTS 2021 dataset compared to the previous years, demonstrating its remarkable adaptability and robustness across diverse datasets. Furthermore, we collected the predicted masks obtained from three datasets to enhance survival prediction, effectively augmenting the dataset size. Radiomic features were then extracted from these predicted masks and, along with clinical data, were used to train a novel ensemble learning-based machine learning model for survival prediction. This model employs a voting mechanism aggregating predictions from multiple models, leading to significant improvements over existing methods. This ensemble approach capitalizes on the strengths of various models, resulting in more accurate and reliable predictions for patient survival. Importantly, we achieved an impressive accuracy of 73% for overall survival (OS) prediction. [ABSTRACT FROM AUTHOR]
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- 2024
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14. Application of machine learning in breast cancer survival prediction using a multimethod approach
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Seyedeh Zahra Hamedi, Hassan Emami, Maryam Khayamzadeh, Reza Rabiei, Mehrad Aria, Majid Akrami, and Vahid Zangouri
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Breast cancer ,Survival prediction ,Deep neural network ,Machine learning ,Medicine ,Science - Abstract
Abstract Breast cancer is one of the most prevalent cancers with an increasing trend in both incidence and mortality rates in Iran. Survival analysis is a pivotal measure in setting appropriate care plans. To the best of our knowledge, this study is pioneering in Iran, introducing a multi-method approach using a Deep Neural Network (DNN) and 11 conventional machine learning (ML) methods to predict the 5 year survival of women with breast cancer. Supplying data from two centers comprising a total of 2644 records and incorporating external validation further distinguishes the study. Thirty-four features were selected based on a literature review and common variables in both datasets. Feature selection was also performed using a p value criterion (
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- 2024
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15. Survival prediction and molecular subtyping of squamous cell lung cancer based on network embedding
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Dingjie Guo, Jing Chen, Yixian Wang, and Xin Liu
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Multi-omics data integration ,Survival prediction ,Molecular subtyping ,Squamous cell lung cancer ,Medicine ,Science - Abstract
Abstract Squamous cell lung cancer (SQCLC), which is fatal to humans, is heterogeneous with different genetic and histological features. We used SBMOI, a multi-omics data integration method from previous study, to integrate clinical, gene expression, and somatic mutation data of SQCLC to construct new patient features. Next, random survival forest (RSF) model and SimpleMKL model were constructed to predict the survival of SQCLC patients, and K-means model was constructed to perform molecular subtyping. The results of the RSF model showed that when the dimension of the patient features were 11 × 364 and the hard threshold was 0.2, we obtained the best results, and the AUC value of the 1-year time-dependent ROC curve was 0.706. The SimpleMKL model, constructed using the same patient features, performed exceptionally well, with 1-year, 5-year, and 10-year survival prediction AUC values of 0.944, 0.947 and 0.950, respectively. We used K-means analysis to identify three SQCLC molecular subtypes with significant survival differences. The patient features constructed by SBMOI were used to effectively predict the survival and molecular subtyping of SQCLC patients. In addition, our study further confirmed the effectiveness in multi-omics data integration task and broad applicability of SBMOI.
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- 2024
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16. Predicting survival, neurotoxicity and response in B-cell lymphoma patients treated with CAR-T therapy using an imaging features-based model
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Blanca Ferrer-Lores, Alfonso Ortiz-Algarra, Alfonso Picó-Peris, Alejandra Estepa-Fernández, Fuensanta Bellvís-Bataller, Glen J. Weiss, Almudena Fuster-Matanzo, Juan Pedro Fernández, Ana Jimenez-Pastor, Rafael Hernani, Ana Saus-Carreres, Ana Benzaquen, Laura Ventura, José Luis Piñana, Ana Belén Teruel, Alicia Serrano-Alcalá, Rosa Dosdá, Pablo Sopena-Novales, Aitana Balaguer-Rosello, Manuel Guerreiro, Jaime Sanz, Luis Martí-Bonmatí, María José Terol, and Ángel Alberich-Bayarri
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CAR-T cells therapy ,Non-Hodgkin lymphoma ,Radiomics ,Survival prediction ,ICANS prediction ,Treatment response prediction ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 - Abstract
Abstract Background This multicentre retrospective observational study aims to develop imaging-based prognostic and predictive models for relapsed/refractory (R/R) B-cell lymphoma patients undergoing CAR-T therapy by integrating clinical data and imaging features. Specifically, our aim was to predict 3- and 6-month treatment response, overall survival (OS), progression-free survival (PFS), and the occurrence of the immune effector cell-associated neurotoxicity syndrome (ICANS). Results Sixty-five patients of R/R B-cell lymphoma treated with CAR-T cells in two centres were included. Pre-infusion [18F]FDG PET/CT scans and clinical data were systematically collected, and imaging features, including kurtosis, entropy, maximum diameter, standardized uptake value (SUV) related features (SUVmax, SUVmean, SUVstd, SUVmedian, SUVp25, SUVp75), total metabolic tumour volume (MTVtotal), and total lesion glycolysis (TLGtotal), were extracted using the Quibim platform. The median age was 62 (range 21–76) years and the median follow-up for survivors was 10.47 (range 0.20–45.80) months. A logistic regression model accurately predicted neurotoxicity (AUC: 0.830), and Cox proportional-hazards models for CAR-T response at 3 and 6 months demonstrated high accuracy (AUC: 0.754 and 0.818, respectively). Median predicted OS after CAR-T therapy was 4.73 months for high MTVtotal and 37.55 months for low MTVtotal. Median predicted PFS was 2.73 months for high MTVtotal and 11.83 months for low MTVtotal. For all outcomes, predictive models, combining imaging features and clinical variables, showed improved accuracy compared to models using only clinical variables or imaging features alone. Conclusion This study successfully integrates imaging features and clinical variables to predict outcomes in R/R B-cell lymphoma patients undergoing CAR-T. Notably, the identified MTVtotal cut-off effectively stratifies patients, as evidenced by significant differences in OS and PFS. Additionally, the predictive models for neurotoxicity and CAR-T response show promising accuracy. This comprehensive approach holds promise for risk stratification and personalized treatment strategies which may become a helpful tool for optimizing CAR-T outcomes in R/R lymphoma patients.
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- 2024
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17. Survival models and longitudinal medical events for hospital readmission forecasting
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Sacha Davis and Russell Greiner
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Machine learning ,Hospital readmission ,Survival prediction ,Individual survival distributions ,Word embeddings ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background The rate of 30-day all-cause hospital readmissions can affect the funding a hospital receives. An accurate and reliable readmission prediction model could save money and increase quality-of-care. Few projects have explored formulating this task as a survival prediction problem, where models can exploit a real-valued time-to-readmission target. This paper demonstrates the effectiveness of a survival-inspired readmission model, especially when paired with a longitudinal patient representation that is agnostic to disease-cohort and predictive task. Methods We forecast readmissions for a population-level cohort of 421,088 patients discharged in 2015 and 2016 from hospitals in Alberta, Canada. Clinical features and sequences of historical medical codes (calculated from at least four full years prior to discharge) from linked administrative sources serve as model inputs. We trained binary 30-day readmission models (XGBoost and a Deep Neural Network) and time-to-event readmission models (CoxPH and N-MTLR) with and without machine-learned medical knowledge at initialization, then compared against the popular LACE-based model using the AUROC score at 30 days (AUROC@30). Survival models are additionally evaluated using concordance, Integrated Brier, and L1-loss scores. Results All models that utilize sequence features markedly out-perform even the best models trained on only clinical features. Further, a time-to-event target improves predictive performance at 30 days, given the same model inputs and architecture. N-MTLR, using solely sequence inputs and initialized with pre-learned medical knowledge, achieves an average AUROC@30 of 0.8460 over five folds with a standard deviation of 0.003. All trained models match or out-perform the LACE baseline of 0.6587±0.003. Conclusion Sequences of administrative medical codes contain rich predictive information for forecasting readmissions, and embedding medical knowledge a priori using machine learning provides readmission models an advantageous foundation for training. When combined with a model that can leverage a time-to-event target, excellent performance is possible on the 30-day all-cause readmission task using only administrative data.
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- 2024
- Full Text
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18. Enhanced ovarian cancer survival prediction using temporal analysis and graph neural networks
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G. S. Pradeep Ghantasala, Kumar Dilip, Pellakuri Vidyullatha, Sarah Allabun, Mohammed S. Alqahtani, Manal Othman, Mohamed Abbas, and Ben Othman Soufiene
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Temporal analysis ,Graph neural networks ,Ovarian cancer ,Survival prediction ,Deep learning, process ,Computer applications to medicine. Medical informatics ,R858-859.7 - Abstract
Abstract Ovarian cancer is a formidable health challenge that demands accurate and timely survival predictions to guide clinical interventions. Existing methods, while commendable, suffer from limitations in harnessing the temporal evolution of patient data and capturing intricate interdependencies among different data elements. In this paper, we present a novel methodology which combines Temporal Analysis and Graph Neural Networks (GNNs) to significantly enhance ovarian cancer survival rate predictions. The shortcomings of current processes originate from their disability to correctly seize the complex interactions amongst diverse scientific information units in addition to the dynamic modifications that arise in a affected person`s nation over time. By combining temporal information evaluation and GNNs, our cautioned approach overcomes those drawbacks and, whilst as compared to preceding methods, yields a noteworthy 8.3% benefit in precision, 4.9% more accuracy, 5.5% more advantageous recall, and a considerable 2.9% reduction in prediction latency. Our method’s Temporal Analysis factor uses longitudinal affected person information to perceive good-sized styles and tendencies that offer precious insights into the direction of ovarian cancer. Through the combination of GNNs, we offer a robust framework able to shoot complicated interactions among exclusive capabilities of scientific data, permitting the version to realize diffused dependencies that would affect survival results. Our paintings have tremendous implications for scientific practice. Prompt and correct estimation of the survival price of ovarian most cancers allows scientific experts to customize remedy regimens, manipulate assets efficiently, and provide individualized care to patients. Additionally, the interpretability of our version`s predictions promotes a collaborative method for affected person care via way of means of strengthening agreement among scientific employees and the AI-driven selection help system. The proposed approach not only outperforms existing methods but also has the possible to develop ovarian cancer treatment by providing clinicians through a reliable tool for informed decision-making. Through a fusion of Temporal Analysis and Graph Neural Networks, we conduit the gap among data-driven insights and clinical practice, proposing a capable opportunity for refining patient outcomes in ovarian cancer management operations.
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- 2024
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19. Predicting the survival of patients with painful tumours treated with palliative radiotherapy: a secondary analysis using the 3-variable number-of-risk-factors model
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Takayuki Sakurai, Tetsuo Saito, Kohsei Yamaguchi, Shigeyuki Takamatsu, Satoshi Kobayashi, Naoki Nakamura, and Natsuo Oya
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Painful tumours ,Palliative radiotherapy ,Three-variable number-of-risk-factors model ,Bone metastases ,Non-bone-metastasis tumours ,Survival prediction ,Medical physics. Medical radiology. Nuclear medicine ,R895-920 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background The 3-variable number-of-risk-factors (NRF) model is a prognostic tool for patients undergoing palliative radiotherapy (PRT). However, there is little research on the NRF model for patients with painful non-bone-metastasis tumours treated with PRT, and the efficacy of the NRF model in predicting survival is unclear to date. Therefore, we aimed to assess the prognostic accuracy of a 3-variable NRF model in patients undergoing PRT for bone and non- bone-metastasis tumours. Methods This was a secondary analysis of studies on PRT for bone-metastasis (BM) and PRT for miscellaneous painful tumours (MPTs), including non-BM tumours. Patients were grouped in the NRF model and survival was compared between groups. Discrimination was evaluated using a time-independent C-index and a time-dependent area under the receiver operating characteristic curve (AUROC). A calibration curve was used to assess the agreement between predicted and observed survival. Results We analysed 485 patients in the BM group and 302 patients in the MPT group. The median survival times in the BM group for groups I, II, and III were 35.1, 10.1, and 3.3 months, respectively (P
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- 2024
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20. Nomogram for predicting survival of older patients with primary ocular adnexal lymphoma
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Youran Cai, Yi Du, and Wenjin Zou
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Ocular adnexal lymphoma ,Older patient ,Survival prediction ,SEER ,Surgery ,RD1-811 - Published
- 2024
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21. Response to induction chemotherapy as a prognostic indicator in locally advanced head and neck squamous cell carcinoma.
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Huwyler, Francesca, Giger, Roland, Bill, Ruben, Rauch, Daniel, and Haefliger, Simon
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Purpose: Induction chemotherapy (IC) for patients with locally advanced stage Head and Neck Squamous Cell Carcinomas (HNSCC) before radio-chemotherapy (RCT) or surgery remains a potential treatment option. This study analyzed how the response to IC correlates with survival outcomes. Methods: We conducted a retrospective single-center study at a tertiary cancer center. Tumors were categorized by anatomical site and response to IC (non-responders vs. responders). Data were analyzed using Kaplan-Meier survival curves and Cox regression analysis. Results: A total of 48 patients received IC. Of these, 33 patients were radiologically evaluable for response. The majority of evaluable patients received either TPF (Docetaxel, Cisplatin, 5-Fluorouracil) (58%) or TP (Docetaxel, Cisplatin) (24%) as their IC regimen. Tumor reduction of 30% or more was observed in 23 patients (69.7%), the tumor control rate was 97%. The 2-year event-free survival (EFS) in the IC evaluable population was 53.1%, overall survival (OS) was 63.6%, and recurrence-free survival (RFS) was 62.5%. Patients with laryngeal or hypopharyngeal tumors that did not respond to IC had a significantly poorer prognosis. This effect was not statistically significant in tumors of the oral cavity or oropharynx, where it was only observed as a trend. Conclusion: IC is highly effective in treating locally advanced stage HNSCC. The response to IC is prognostic for survival, particularly in cancers of the larynx and hypopharynx. [ABSTRACT FROM AUTHOR]
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- 2025
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22. Admission blood tests predicting survival of SARS-CoV-2 infected patients: a practical implementation of graph convolution network in imbalance dataset
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Jie Lian, Fan Huang, Xinhai Huang, Kitty Yu-Yeung Lau, Kei Shing Ng, Carlin Chun Fai Chu, Simon Ching Lam, Mohamad Koohli-Moghadam, and Varut Vardhanabhuti
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COVID-19 ,Graph convolutional networks ,Machine learning ,Cox Proportional-Hazards ,Survival prediction ,Infectious and parasitic diseases ,RC109-216 - Abstract
Abstract Background Predicting an individual’s risk of death from COVID-19 is essential for planning and optimising resources. However, since the real-world mortality rate is relatively low, particularly in places like Hong Kong, this makes building an accurate prediction model difficult due to the imbalanced nature of the dataset. This study introduces an innovative application of graph convolutional networks (GCNs) to predict COVID-19 patient survival using a highly imbalanced dataset. Unlike traditional models, GCNs leverage structural relationships within the data, enhancing predictive accuracy and robustness. By integrating demographic and laboratory data into a GCN framework, our approach addresses class imbalance and demonstrates significant improvements in prediction accuracy. Methods The cohort included all consecutive positive COVID-19 patients fulfilling study criteria admitted to 42 public hospitals in Hong Kong between January 23 and December 31, 2020 (n = 7,606). We proposed the population-based graph convolutional neural network (GCN) model which took blood test results, age and sex as inputs to predict the survival outcomes. Furthermore, we compared our proposed model to the Cox Proportional Hazard (CPH) model, conventional machine learning models, and oversampling machine learning models. Additionally, a subgroup analysis was performed on the test set in order to acquire a deeper understanding of the relationship between each patient node and its neighbours, revealing possible underlying causes of the inaccurate predictions. Results The GCN model was the top-performing model, with an AUC of 0.944, considerably outperforming all other models (p
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- 2024
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23. Robust evaluation of deep learning-based representation methods for survival and gene essentiality prediction on bulk RNA-seq data
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Baptiste Gross, Antonin Dauvin, Vincent Cabeli, Virgilio Kmetzsch, Jean El Khoury, Gaëtan Dissez, Khalil Ouardini, Simon Grouard, Alec Davi, Regis Loeb, Christian Esposito, Louis Hulot, Ridouane Ghermi, Michael Blum, Yannis Darhi, Eric Y. Durand, and Alberto Romagnoni
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RNAseq ,Representation learning ,Deep learning ,Survival prediction ,Gene essentiality ,Benchmarking ,Medicine ,Science - Abstract
Abstract Deep learning (DL) has shown potential to provide powerful representations of bulk RNA-seq data in cancer research. However, there is no consensus regarding the impact of design choices of DL approaches on the performance of the learned representation, including the model architecture, the training methodology and the various hyperparameters. To address this problem, we evaluate the performance of various design choices of DL representation learning methods using TCGA and DepMap pan-cancer datasets and assess their predictive power for survival and gene essentiality predictions. We demonstrate that baseline methods achieve comparable or superior performance compared to more complex models on survival predictions tasks. DL representation methods, however, are the most efficient to predict the gene essentiality of cell lines. We show that auto-encoders (AE) are consistently improved by techniques such as masking and multi-head training. Our results suggest that the impact of DL representations and of pretraining are highly task- and architecture-dependent, highlighting the need for adopting rigorous evaluation guidelines. These guidelines for robust evaluation are implemented in a pipeline made available to the research community.
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- 2024
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24. Machine learning identifies prognostic subtypes of the tumor microenvironment of NSCLC
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Duo Yu, Michael J. Kane, Eugene J. Koay, Ignacio I. Wistuba, and Brian P. Hobbs
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Precision oncology ,Thoracic tumor ,Biomarkers ,Cancer immunity ,Survival prediction ,Medicine ,Science - Abstract
Abstract The tumor microenvironment (TME) plays a fundamental role in tumorigenesis, tumor progression, and anti-cancer immunity potential of emerging cancer therapeutics. Understanding inter-patient TME heterogeneity, however, remains a challenge to efficient drug development. This article applies recent advances in machine learning (ML) for survival analysis to a retrospective study of NSCLC patients who received definitive surgical resection and immune pathology following surgery. ML methods are compared for their effectiveness in identifying prognostic subtypes. Six survival models, including Cox regression and five survival machine learning methods, were calibrated and applied to predict survival for NSCLC patients based on PD-L1 expression, CD3 expression, and ten baseline patient characteristics. Prognostic subregions of the biomarker space are delineated for each method using synthetic patient data augmentation and compared between models for overall survival concordance. A total of 423 NSCLC patients (46% female; median age [inter quantile range]: 67 [60–73]) treated with definite surgical resection were included in the study. And 219 (52%) patients experienced events during the observation period consisting of a maximum follow-up of 10 years and median follow up 78 months. The random survival forest (RSF) achieved the highest predictive accuracy, with a C-index of 0.84. The resultant biomarker subtypes demonstrate that patients with high PD-L1 expression combined with low CD3 counts experience higher risk of death within five-years of surgical resection.
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- 2024
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25. Innovations in Artificial Intelligence-Driven Breast Cancer Survival Prediction: A Narrative Review.
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Mooghal, Mehwish, Nasir, Saad, Arif, Aiman, Khan, Wajiha, Rashid, Yasmin Abdul, and Vohra, Lubna M
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ARTIFICIAL neural networks , *MACHINE learning , *ARTIFICIAL intelligence , *TECHNOLOGICAL innovations , *MEDICAL personnel - Abstract
This narrative review explores the burgeoning field of Artificial Intelligence (AI)-driven Breast Cancer (BC) survival prediction, emphasizing the transformative impact on patient care. From machine learning to deep neural networks, diverse models demonstrate the potential to refine prognosis accuracy and tailor treatment strategies. The literature underscores the need for clinician integration and addresses challenges of model generalizability and ethical considerations. Crucially, AI's promise extends to Low- and Middle-Income Countries (LMICs), presenting an opportunity to bridge healthcare disparities. Collaborative efforts in research, technology transfer, and education are essential to empower healthcare professionals in LMICs. As we navigate this frontier, AI emerges not only as a technological advancement but as a guiding light toward personalized, accessible BC care, marking a significant stride in the global fight against this formidable disease. [ABSTRACT FROM AUTHOR]
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- 2024
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26. A Novel Approach for Predicting the Survival of Colorectal Cancer Patients Using Machine Learning Techniques and Advanced Parameter Optimization Methods.
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Woźniacki, Andrzej, Książek, Wojciech, and Mrowczyk, Patrycja
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RANDOM forest algorithms , *SURVIVAL rate , *PROFESSIONAL practice , *EARLY detection of cancer , *ARTIFICIAL intelligence , *COLORECTAL cancer , *DECISION making in clinical medicine , *DISEASE prevalence , *CANCER patients , *PATIENT care , *DESCRIPTIVE statistics , *MACHINE learning , *ALGORITHMS - Abstract
Simple Summary: Colorectal cancer remains a major health challenge with high mortality rates and increasing diagnoses among younger adults. This study introduces a new method to predict patient survival using machine learning, a technique that can greatly enhance early diagnosis and treatment. The aim of our study is to apply eight different machine learning algorithms to a large data set of patients with colorectal cancer in Brazil and optimize these models with advanced parameter tuning tools. The best performing models achieved around 80% accuracy in predicting survival rates over one, three, and five years, as well as overall and cancer-specific mortality. This approach promises to improve clinical decision making by providing more accurate survival predictions, ultimately helping better patient care and management. Background: Colorectal cancer is one of the most prevalent forms of cancer and is associated with a high mortality rate. Additionally, an increasing number of adults under 50 are being diagnosed with the disease. This underscores the importance of leveraging modern technologies, such as artificial intelligence, for early diagnosis and treatment support. Methods: Eight classifiers were utilized in this research: Random Forest, XGBoost, CatBoost, LightGBM, Gradient Boosting, Extra Trees, the k-nearest neighbor algorithm (KNN), and decision trees. These algorithms were optimized using the frameworks Optuna, RayTune, and HyperOpt. This study was conducted on a public dataset from Brazil, containing information on tens of thousands of patients. Results: The models developed in this study demonstrated high classification accuracy in predicting one-, three-, and five-year survival, as well as overall mortality and cancer-specific mortality. The CatBoost, LightGBM, Gradient Boosting, and Random Forest classifiers delivered the best performance, achieving an accuracy of approximately 80% across all the evaluated tasks. Conclusions: This research enabled the development of effective classification models that can be applied in clinical practice. [ABSTRACT FROM AUTHOR]
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- 2024
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27. Comparison of deep learning models to traditional Cox regression in predicting survival of colon cancer: Based on the SEER database.
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Qu, Zihan, Wang, Yashan, Guo, Dingjie, He, Guangliang, Sui, Chuanying, Duan, Yuqing, Zhang, Xin, Meng, Hengyu, Lan, Linwei, and Liu, Xin
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ARTIFICIAL neural networks , *MACHINE learning , *RECEIVER operating characteristic curves , *DEEP learning , *COLON cancer - Abstract
Background and Aim: In this study, a deep learning algorithm was used to predict the survival rate of colon cancer (CC) patients, and compared its performance with traditional Cox regression. Methods: In this population‐based cohort study, we used the characteristics of patients diagnosed with CC between 2010 and 2015 from the Surveillance, Epidemiology and End Results (SEER) database. The population was randomized into a training set (n = 10 596, 70%) and a test set (n = 4536, 30%). Brier scores, area under the (AUC) receiver operating characteristic curve and calibration curves were used to compare the performance of the three most popular deep learning models, namely, artificial neural networks (ANN), deep neural networks (DNN), and long‐short term memory (LSTM) neural networks with Cox proportional hazard (CPH) model. Results: In the independent test set, the Brier values of ANN, DNN, LSTM and CPH were 0.155, 0.149, 0.148, and 0.170, respectively. The AUC values were 0.906 (95% confidence interval [CI] 0.897–0.916), 0.908 (95% CI 0.899–0.918), 0.910 (95% CI 0.901–0.919), and 0.793 (95% CI 0.769–0.816), respectively. Deep learning showed superior promising results than CPH in predicting CC specific survival. Conclusions: Deep learning showed potential advantages over traditional CPH models in terms of prognostic assessment and treatment recommendations. LSTM exhibited optimal predictive accuracy and has the ability to provide reliable information on individual survival and treatment recommendations for CC patients. [ABSTRACT FROM AUTHOR]
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- 2024
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28. OPTIMIZATION OF SCREENING PROTOCOLS FOR CERVICAL CANCER USING MACHINE LEARNING ALGORITHMS: A SYSTEMATIC REVIEW AND META-ANALYSIS.
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Onuiri, Ernest E. and Akinwande, Akeem O.
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DEEP learning ,CONVOLUTIONAL neural networks ,CERVICAL cancer ,SUPPORT vector machines ,BLENDED learning - Abstract
Cervical cancer is a highly prevalent malignancy affecting women worldwide, ranking as the seventh most common cancer globally. This study aims to systematically review and analyze cervical cancer survival predictions using machine learning (ML) algorithms. A comprehensive search was conducted across Scopus and PubMed databases in February 2024. Extracted articles were screened using Hubmeta software, with duplicates and non-relevant studies excluded. The final selection, comprising 24 articles, focused on survival predictions through ML techniques. These studies, published mostly post-2019, included datasets ranging from 75 to 9,462 cervical cancer patients and up to 91,294 squamous cell samples. The most commonly applied ML models were Random Forest (RF), Neural Networks (NN), Support Vector Machines (SVM), Ensemble and Hybrid Learning, and Deep Learning (DL). The area under the curve (AUC) for these models ranged from 0.84 to 0.9875, demonstrating their strong predictive capabilities. Clinical patient records were the primary data source. Meta-analysis was performed on the extracted data using GraphPad Prism for descriptive statistics and One-Way ANOVA. No significant differences were found between group means, as evidenced by an R-squared value of 0.1459. This result indicates that the independent variable (year of study) explained only 14.59% of the variance in ML model performance. The study found that the use of ML models has increased over time, particularly with Convolutional Neural Networks (CNNs) such as the ResNet50 model, which demonstrated superior accuracy metrics, including over 90% accuracy for the ResNet152 variant. These findings suggest that integrating multi-dimensional data with ML models holds significant potential for improving survival predictions in cervical cancer patients. Future research is recommended to develop tailored ML algorithms with even higher predictive accuracy for cervical cancer survival. [ABSTRACT FROM AUTHOR]
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- 2024
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29. AI-ASSISTED SURVIVAL PREDICTION IN COLORECTAL CANCER: A CLINICAL DECISION SUPPORT TOOL.
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Misirlioglu, Hüseyin Koray, Leblebici, Asim, Calibasi-Kocal, Gizem, Ellidokuz, Hülya, and Basbinar, Yasemin
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RANDOM forest algorithms ,WORLD Wide Web ,GENOMICS ,BIBLIOGRAPHIC databases ,PREDICTION models ,BODY mass index ,ARTIFICIAL intelligence ,CLINICAL decision support systems ,KRUSKAL-Wallis Test ,FISHER exact test ,COLORECTAL cancer ,DESCRIPTIVE statistics ,CELLULAR signal transduction ,MANN Whitney U Test ,MULTIVARIATE analysis ,SUPPORT vector machines ,KAPLAN-Meier estimator ,LOG-rank test ,RACE ,STATISTICS ,SURVIVAL analysis (Biometry) ,DECISION trees ,DATA analysis software ,COMPARATIVE studies ,ALGORITHMS ,USER interfaces ,PROPORTIONAL hazards models ,REGRESSION analysis - Abstract
Purpose: This study was planned to determine the problems and affecting factors that children encounter Purpose: Colorectal cancer (CRC) is a leading cause of cancer-related mortality worldwide. Accurate survival prediction is crucial for advanced-stage patients to optimize treatment strategies and improve clinical outcomes. This study aimed to develop an artificial intelligence-assisted clinical decision support system (CDSS) for survival prediction in CRC patients using clinical and genomic data from the Cancer Genome Atlas Colon Adenocarcinoma Collection (TCGA-COAD) dataset. Methods: Machine learning algorithms, including C4.5 Decision Tree, Support Vector Machines (SVM), Random Forest, and Naive Bayes, were employed to create survival prediction models. Clinical parameters and genomic data from key pathways, such as glycolysis/gluconeogenesis and mTORCI, were integrated into the models. The models were evaluated based on accuracy and performance. Results: The Random Forest algorithm achieved the highest accuracy (82.3%) when only clinical parameters were used. When clinical data were combined with gene expression data, the model's accuracy increased further. The resulting models were incorporated into a user-friendly web interface, SurvCOCA, for clinical use. Conclusions: This study demonstrates the potential of Al-based tools to improve prognosis predictions in CRC patients. Further research is needed, with larger datasets and additional machine learning algorithms, to enhance clinical decision-making and optimize treatment strategies. [ABSTRACT FROM AUTHOR]
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- 2024
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30. Deep learning prediction of survival in patients with heart failure using chest radiographs.
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Jia, Han, Liao, Shengen, Zhu, Xiaomei, Liu, Wangyan, Xu, Yi, Ge, Rongjun, and Zhu, Yinsu
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Heart failure (HF) is associated with high rates of morbidity and mortality. The value of deep learning survival prediction models using chest radiographs in patients with heart failure is currently unclear. The aim of our study is to develop and validate a deep learning survival prediction model using chest X-ray (DLSPCXR) in patients with HF. The study retrospectively enrolled a cohort of 353 patients with HF who underwent chest X-ray (CXR) at our institution between March 2012 and March 2017. The dataset was randomly divided into training (n = 247) and validation (n = 106) datasets. Univariate and multivariate Cox analysis were conducted on the training dataset to develop clinical and imaging survival prediction models. The DLSPCXR was trained and the selected clinical parameters were incorporated into DLSPCXR to establish a new model called DLSPinteg. Discrimination performance was evaluated using the time-dependent area under the receiver operating characteristic curves (TD AUC) at 1, 3, and 5-years survival. Delong's test was employed for the comparison of differences between two AUCs of different models. The risk-discrimination capability of the optimal model was evaluated by the Kaplan–Meier curve. In multivariable Cox analysis, older age, higher N-terminal pro-B-type natriuretic peptide (NT-ProBNP), systolic pulmonary artery pressure (sPAP) > 50 mmHg, New York Heart Association (NYHA) functional class III–IV and cardiothoracic ratio (CTR) ≥ 0.62 in CXR were independent predictors of poor prognosis in patients with HF. Based on the receiver operating characteristic (ROC) curve analysis, DLSPCXR had better performance at predicting 5-year survival than the imaging Cox model in the validation cohort (AUC: 0.757 vs. 0.561, P = 0.01). DLSPinteg as the optimal model outperforms the clinical Cox model (AUC: 0.826 vs. 0.633, P = 0.03), imaging Cox model (AUC: 0.826 vs. 0.555, P < 0.001), and DLSPCXR (AUC: 0.826 vs. 0.767, P = 0.06). Deep learning models using chest radiographs can predict survival in patients with heart failure with acceptable accuracy. [ABSTRACT FROM AUTHOR]
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- 2024
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31. Admission blood tests predicting survival of SARS-CoV-2 infected patients: a practical implementation of graph convolution network in imbalance dataset.
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Lian, Jie, Huang, Fan, Huang, Xinhai, Lau, Kitty Yu-Yeung, Ng, Kei Shing, Chu, Carlin Chun Fai, Lam, Simon Ching, Koohli-Moghadam, Mohamad, and Vardhanabhuti, Varut
- Subjects
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MACHINE learning , *CONVOLUTIONAL neural networks , *FISHER discriminant analysis , *PROPORTIONAL hazards models , *COVID-19 - Abstract
Background: Predicting an individual's risk of death from COVID-19 is essential for planning and optimising resources. However, since the real-world mortality rate is relatively low, particularly in places like Hong Kong, this makes building an accurate prediction model difficult due to the imbalanced nature of the dataset. This study introduces an innovative application of graph convolutional networks (GCNs) to predict COVID-19 patient survival using a highly imbalanced dataset. Unlike traditional models, GCNs leverage structural relationships within the data, enhancing predictive accuracy and robustness. By integrating demographic and laboratory data into a GCN framework, our approach addresses class imbalance and demonstrates significant improvements in prediction accuracy. Methods: The cohort included all consecutive positive COVID-19 patients fulfilling study criteria admitted to 42 public hospitals in Hong Kong between January 23 and December 31, 2020 (n = 7,606). We proposed the population-based graph convolutional neural network (GCN) model which took blood test results, age and sex as inputs to predict the survival outcomes. Furthermore, we compared our proposed model to the Cox Proportional Hazard (CPH) model, conventional machine learning models, and oversampling machine learning models. Additionally, a subgroup analysis was performed on the test set in order to acquire a deeper understanding of the relationship between each patient node and its neighbours, revealing possible underlying causes of the inaccurate predictions. Results: The GCN model was the top-performing model, with an AUC of 0.944, considerably outperforming all other models (p < 0.05), including the oversampled CPH model (0.708), linear regression (0.877), Linear Discriminant Analysis (0.860), K-nearest neighbours (0.834), Gaussian predictor (0.745) and support vector machine (0.847). With Kaplan-Meier estimates, the GCN model demonstrated good discriminability between low- and high-risk individuals (p < 0.0001). Based on subanalysis using the weighted-in score, although the GCN model was able to discriminate well between different predicted groups, the separation was inadequate between false negative (FN) and true negative (TN) groups. Conclusion: The GCN model considerably outperformed all other machine learning methods and baseline CPH models. Thus, when applied to this imbalanced COVID survival dataset, adopting a population graph representation may be an approach to achieving good prediction. [ABSTRACT FROM AUTHOR]
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- 2024
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32. Robust evaluation of deep learning-based representation methods for survival and gene essentiality prediction on bulk RNA-seq data.
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Gross, Baptiste, Dauvin, Antonin, Cabeli, Vincent, Kmetzsch, Virgilio, El Khoury, Jean, Dissez, Gaëtan, Ouardini, Khalil, Grouard, Simon, Davi, Alec, Loeb, Regis, Esposito, Christian, Hulot, Louis, Ghermi, Ridouane, Blum, Michael, Darhi, Yannis, Durand, Eric Y., and Romagnoni, Alberto
- Abstract
Deep learning (DL) has shown potential to provide powerful representations of bulk RNA-seq data in cancer research. However, there is no consensus regarding the impact of design choices of DL approaches on the performance of the learned representation, including the model architecture, the training methodology and the various hyperparameters. To address this problem, we evaluate the performance of various design choices of DL representation learning methods using TCGA and DepMap pan-cancer datasets and assess their predictive power for survival and gene essentiality predictions. We demonstrate that baseline methods achieve comparable or superior performance compared to more complex models on survival predictions tasks. DL representation methods, however, are the most efficient to predict the gene essentiality of cell lines. We show that auto-encoders (AE) are consistently improved by techniques such as masking and multi-head training. Our results suggest that the impact of DL representations and of pretraining are highly task- and architecture-dependent, highlighting the need for adopting rigorous evaluation guidelines. These guidelines for robust evaluation are implemented in a pipeline made available to the research community. [ABSTRACT FROM AUTHOR]
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- 2024
- Full Text
- View/download PDF
33. Outcome Prediction Using Multi-Modal Information: Integrating Large Language Model-Extracted Clinical Information and Image Analysis.
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Sun, Di, Hadjiiski, Lubomir, Gormley, John, Chan, Heang-Ping, Caoili, Elaine, Cohan, Richard, Alva, Ajjai, Bruno, Grace, Mihalcea, Rada, Zhou, Chuan, and Gulani, Vikas
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CLINICAL medicine , *MEDICAL information storage & retrieval systems , *PREDICTION models , *RESEARCH funding , *RECEIVER operating characteristic curves , *ARTIFICIAL intelligence , *RADIOMICS , *COMPUTED tomography , *NATURAL language processing , *TREATMENT effectiveness , *RETROSPECTIVE studies , *CANCER chemotherapy , *KAPLAN-Meier estimator , *DEEP learning , *MEDICAL records , *DIGITAL image processing , *OVERALL survival ,BLADDER tumors - Abstract
Simple Summary: Predicting the survival of bladder cancer patients following cystectomy can offer valuable information for treatment planning, decision-making, patient counseling, and resource allocation. Our aim was to develop large language model (LLM)-aided multi-modal predictive models, based on clinical information and CT images. These models achieved performances comparable to those of multi-modal predictive models that rely on manually extracted clinical information. This study demonstrates the potential of employing LLMs to process medical data, and of integrating LLM-processed data into modeling for prognosis. Survival prediction post-cystectomy is essential for the follow-up care of bladder cancer patients. This study aimed to evaluate artificial intelligence (AI)-large language models (LLMs) for extracting clinical information and improving image analysis, with an initial application involving predicting five-year survival rates of patients after radical cystectomy for bladder cancer. Data were retrospectively collected from medical records and CT urograms (CTUs) of bladder cancer patients between 2001 and 2020. Of 781 patients, 163 underwent chemotherapy, had pre- and post-chemotherapy CTUs, underwent radical cystectomy, and had an available post-surgery five-year survival follow-up. Five AI-LLMs (Dolly-v2, Vicuna-13b, Llama-2.0-13b, GPT-3.5, and GPT-4.0) were used to extract clinical descriptors from each patient's medical records. As a reference standard, clinical descriptors were also extracted manually. Radiomics and deep learning descriptors were extracted from CTU images. The developed multi-modal predictive model, CRD, was based on the clinical (C), radiomics (R), and deep learning (D) descriptors. The LLM retrieval accuracy was assessed. The performances of the survival predictive models were evaluated using AUC and Kaplan–Meier analysis. For the 163 patients (mean age 64 ± 9 years; M:F 131:32), the LLMs achieved extraction accuracies of 74%~87% (Dolly), 76%~83% (Vicuna), 82%~93% (Llama), 85%~91% (GPT-3.5), and 94%~97% (GPT-4.0). For a test dataset of 64 patients, the CRD model achieved AUCs of 0.89 ± 0.04 (manually extracted information), 0.87 ± 0.05 (Dolly), 0.83 ± 0.06~0.84 ± 0.05 (Vicuna), 0.81 ± 0.06~0.86 ± 0.05 (Llama), 0.85 ± 0.05~0.88 ± 0.05 (GPT-3.5), and 0.87 ± 0.05~0.88 ± 0.05 (GPT-4.0). This study demonstrates the use of LLM model-extracted clinical information, in conjunction with imaging analysis, to improve the prediction of clinical outcomes, with bladder cancer as an initial example. [ABSTRACT FROM AUTHOR]
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- 2024
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34. Are Two Better Than One? The Value of Serial Assessments and the Difficulty of Observational Research.
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Levy, Lauren E. and Tonna, Joseph E.
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EXTRACORPOREAL membrane oxygenation , *RETURN of spontaneous circulation , *CRITICAL care medicine , *INTRACRANIAL pressure , *PATHOLOGICAL physiology , *HUMAN physiology - Abstract
This article discusses the value of serial assessments and the challenges of observational research in the context of extracorporeal cardiopulmonary resuscitation (ECPR) for patients with out-of-hospital cardiac arrest (OHCA). It highlights three large randomized controlled trials that evaluated the effect of ECPR on survival, each with different findings. The article then introduces a new study that examines the added value of serial lactate measurements for outcome prediction among adult patients undergoing ECPR after OHCA. The study finds that increased lactate clearance is associated with higher survival rates and more favorable neurological outcomes. However, the study has limitations, such as not incorporating arterial oxygen tension (Pao2) into the analysis, which may have influenced the results. Overall, the study emphasizes the importance of serial assessments and post-resuscitation care in improving outcomes for ECPR patients. [Extracted from the article]
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- 2024
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35. Multimodal Machine Learning for Prognosis and Survival Prediction in Renal Cell Carcinoma Patients: A Two-Stage Framework with Model Fusion and Interpretability Analysis.
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Yan, Keyue, Fong, Simon, Li, Tengyue, and Song, Qun
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RENAL cell carcinoma ,SURVIVAL analysis (Biometry) ,MACHINE learning ,STANDARD deviations ,PROGNOSIS - Abstract
Current medical limitations in predicting cancer survival status and time necessitate advancements beyond traditional methods and physical indicators. This research introduces a novel two-stage prognostic framework for renal cell carcinoma, addressing the inadequacies of existing diagnostic approaches. In the first stage, the framework accurately predicts the survival status (alive or deceased) with metrics Accuracy, Precision, Recall, and F1 score to evaluate the effects of the classification results, while the second stage focuses on forecasting the future survival time of deceased patients with Root Mean Square Error and Mean Absolute Error to evaluate the regression results. Leveraging popular machine learning models, such as Adaptive Boosting, Extra Trees, Gradient Boosting, Random Forest, and Extreme Gradient Boosting, along with fusion models like Voting, Stacking, and Blending, our approach significantly improves prognostic accuracy as shown in our experiments. The novelty of our research lies in the integration of a logistic regression meta-model for interpreting the blending model's predictions, enhancing transparency. By the SHapley Additive exPlanations' interpretability, we provide insights into variable contributions, aiding understanding at both global and local levels. Through modal segmentation and multimodal fusion applied to raw data from the Surveillance, Epidemiology, and End Results program, we enhance the precision of renal cell carcinoma prognosis. Our proposed model provides an interpretable analysis of model predictions, highlighting key variables influencing classification and regression decisions in the two-stage renal cell carcinoma prognosis framework. By addressing the black-box problem inherent in machine learning, our proposed model helps healthcare practitioners with a more reliable and transparent basis for applying machine learning in cancer prognostication. [ABSTRACT FROM AUTHOR]
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- 2024
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36. Lung cancer survival prognosis using a two-stage modeling approach.
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Aggarwal, Preeti, Marwah, Namrata, Kaur, Ravreet, and Mittal, Ajay
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SURVIVAL analysis (Biometry) ,MACHINE learning ,LUNG cancer ,STANDARD deviations ,CANCER prognosis ,RECEIVER operating characteristic curves - Abstract
Lung cancer, the second most prevalent form of cancer with the highest mortality rate, necessitates the stratification of patients based on their survival rates to develop effective treatment strategies. This study presents a two-stage framework for predicting lung cancer survival. The initial stage, classification, focuses on forecasting the five-year survival probability of lung cancer patients. Subsequent analysis was conducted on patients accurately classified as deceased during this stage. The second stage, regression, predicts the actual survival duration in months for deceased patients. This analysis employs the widely recognized Surveillance, Epidemiology, and End Results (SEER) database. To reduce dimensionality, two feature selection techniques, Recursive Feature Elimination with Random Forest (RFE-RF) and the Least Absolute Shrinkage and Selection Operator (LASSO), were adopted. Machine learning models were then trained using five-fold cross-validation for both classification and regression. Experimental results demonstrate that ensemble methods outperform other algorithms, including Logistic Regression (LR), Random Forest (RF), Multilayer Perceptron (MLP), Adaboost, and Naïve Bayes (NB), in terms of performance metrics. The existing techniques offer high accuracy for shorter survival periods, particularly for survival times of up to 6 months. Notably, the Light Gradient Boosting Machine (LGBM) classifier combined with RFE-RF achieves the highest classification accuracy of 89.6% and an area under the receiver operating characteristic (ROC) curve (AUC) score of 92.03 for survival durations up to 11 months. In regression analysis, the LGBM regressor outperforms its counterparts with a Mean Absolute Error (MAE) value of 7.53 and a Root Mean Squared Error (RMSE) value of 10.49. The study critically evaluates various cost functions' effectiveness in regression, validating the accuracy of survival duration predictions for the given dataset. [ABSTRACT FROM AUTHOR]
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- 2024
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37. Prognostic Nomogram for Predicting Survival in Asian Patients With Small‐Cell Lung Cancer: A Comprehensive Population‐Based Study and External Verification
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Yuanli Xia, Jingjing Qu, Yufang Wang, Yanping Zhu, Jianying Zhou, and Jianya Zhou
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Asian patients ,nomogram ,small cell lung cancer ,survival prediction ,Diseases of the respiratory system ,RC705-779 - Abstract
ABSTRACT Background The incidence of small cell lung cancer (SCLC) among Asian patients is on the rise. Nevertheless, there remains a deficiency in precise prognostic models tailored to the specific needs of this patient population. It is imperative to develop a novel nomogram aimed at forecasting the prognosis of Asian SCLC patients. Methods The SEER database supplied data on 661 Asian SCLC patients, who were then divided into training and internal validation sets through a random selection process. In addition, we identified 212 patients from a Chinese medical institution for the purpose of creating an external validation cohort. To forecast survival, we employed both univariate and multivariate analyses. The performance of our nomogram was assessed through calibration plots, the concordance index (C‐index), and decision curve analysis (DCA). Results Five independent prognostic factors were determined and integrated into the nomogram. C‐index values for the training and internal validation cohorts were 0.774 (95% confidence interval [CI] = 0.751–0.797) and 0.731 (95%CI = 0.690–0.772), respectively. In the external validation cohort, the C‐index is 0.712 (95% CI = 0.655–0.7692). Calibration curves demonstrated highly accurate predictions. When compared to the AJCC staging system, our model exhibited improved net benefits in DCA. Furthermore, the risk stratification system effectively differentiated patients with varying survival risks. Conclusion We have created a novel nomogram for predicting the survival of Asian patients with SCLC. This nomogram has been subjected to external validation and has shown its superiority over the conventional TNM staging system. It offers a more precise and reliable means of forecasting the prognosis of Asian SCLC patients.
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- 2024
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38. Survival Prediction of Bladder Cancer Based on Weakly Supervised Learning
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Wang, Yihang, Zhang, Qi, Lu, Min, Bi, Hai, Angrisani, Leopoldo, Series Editor, Arteaga, Marco, Series Editor, Chakraborty, Samarjit, Series Editor, Chen, Shanben, Series Editor, Chen, Tan Kay, Series Editor, Dillmann, Rüdiger, Series Editor, Duan, Haibin, Series Editor, Ferrari, Gianluigi, Series Editor, Ferre, Manuel, Series Editor, Jabbari, Faryar, Series Editor, Jia, Limin, Series Editor, Kacprzyk, Janusz, Series Editor, Khamis, Alaa, Series Editor, Kroeger, Torsten, Series Editor, Li, Yong, Series Editor, Liang, Qilian, Series Editor, Martín, Ferran, Series Editor, Ming, Tan Cher, Series Editor, Minker, Wolfgang, Series Editor, Misra, Pradeep, Series Editor, Mukhopadhyay, Subhas, Series Editor, Ning, Cun-Zheng, Series Editor, Nishida, Toyoaki, Series Editor, Oneto, Luca, Series Editor, Panigrahi, Bijaya Ketan, Series Editor, Pascucci, Federica, Series Editor, Qin, Yong, Series Editor, Seng, Gan Woon, Series Editor, Speidel, Joachim, Series Editor, Veiga, Germano, Series Editor, Wu, Haitao, Series Editor, Zamboni, Walter, Series Editor, Tan, Kay Chen, Series Editor, Jia, Yingmin, editor, Zhang, Weicun, editor, Fu, Yongling, editor, and Yang, Huihua, editor
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- 2024
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39. SCMIL: Sparse Context-Aware Multiple Instance Learning for Predicting Cancer Survival Probability Distribution in Whole Slide Images
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Yang, Zekang, Liu, Hong, Wang, Xiangdong, Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Linguraru, Marius George, editor, Dou, Qi, editor, Feragen, Aasa, editor, Giannarou, Stamatia, editor, Glocker, Ben, editor, Lekadir, Karim, editor, and Schnabel, Julia A., editor
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- 2024
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40. MoME: Mixture of Multimodal Experts for Cancer Survival Prediction
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Xiong, Conghao, Chen, Hao, Zheng, Hao, Wei, Dong, Zheng, Yefeng, Sung, Joseph J. Y., King, Irwin, Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Linguraru, Marius George, editor, Dou, Qi, editor, Feragen, Aasa, editor, Giannarou, Stamatia, editor, Glocker, Ben, editor, Lekadir, Karim, editor, and Schnabel, Julia A., editor
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- 2024
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41. SurvRNC: Learning Ordered Representations for Survival Prediction Using Rank-N-Contrast
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Saeed, Numan, Ridzuan, Muhammad, Maani, Fadillah Adamsyah, Alasmawi, Hussain, Nandakumar, Karthik, Yaqub, Mohammad, Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Linguraru, Marius George, editor, Dou, Qi, editor, Feragen, Aasa, editor, Giannarou, Stamatia, editor, Glocker, Ben, editor, Lekadir, Karim, editor, and Schnabel, Julia A., editor
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- 2024
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42. MuGI: Multi-Granularity Interactions of Heterogeneous Biomedical Data for Survival Prediction
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Long, Lifan, Cui, Jiaqi, Zeng, Pinxian, Li, Yilun, Liu, Yuanjun, Wang, Yan, Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Linguraru, Marius George, editor, Dou, Qi, editor, Feragen, Aasa, editor, Giannarou, Stamatia, editor, Glocker, Ben, editor, Lekadir, Karim, editor, and Schnabel, Julia A., editor
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- 2024
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43. Deep Learning for Cancer Prognosis Prediction Using Portrait Photos by StyleGAN Embedding
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Hagag, Amr, Gomaa, Ahmed, Kornek, Dominik, Maier, Andreas, Fietkau, Rainer, Bert, Christoph, Huang, Yixing, Putz, Florian, Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Linguraru, Marius George, editor, Dou, Qi, editor, Feragen, Aasa, editor, Giannarou, Stamatia, editor, Glocker, Ben, editor, Lekadir, Karim, editor, and Schnabel, Julia A., editor
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- 2024
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44. Ensemble of Prior-guided Expert Graph Models for Survival Prediction in Digital Pathology
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Ramanathan, Vishwesh, Pati, Pushpak, McNeil, Matthew, Martel, Anne L., Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Linguraru, Marius George, editor, Dou, Qi, editor, Feragen, Aasa, editor, Giannarou, Stamatia, editor, Glocker, Ben, editor, Lekadir, Karim, editor, and Schnabel, Julia A., editor
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- 2024
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45. PG-MLIF: Multimodal Low-Rank Interaction Fusion Framework Integrating Pathological Images and Genomic Data for Cancer Prognosis Prediction
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Pan, Xipeng, An, Yajun, Lan, Rushi, Liu, Zhenbing, Liu, Zaiyi, Lu, Cheng, Yang, Huihua, Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Linguraru, Marius George, editor, Dou, Qi, editor, Feragen, Aasa, editor, Giannarou, Stamatia, editor, Glocker, Ben, editor, Lekadir, Karim, editor, and Schnabel, Julia A., editor
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- 2024
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46. LLM-Guided Multi-modal Multiple Instance Learning for 5-Year Overall Survival Prediction of Lung Cancer
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Kim, Kyungwon, Lee, Yongmoon, Park, Doohyun, Eo, Taejoon, Youn, Daemyung, Lee, Hyesang, Hwang, Dosik, Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Linguraru, Marius George, editor, Dou, Qi, editor, Feragen, Aasa, editor, Giannarou, Stamatia, editor, Glocker, Ben, editor, Lekadir, Karim, editor, and Schnabel, Julia A., editor
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- 2024
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47. An Attention-Driven Hybrid Network for Survival Analysis of Tumorigenesis Patients Using Whole Slide Images
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Parvaiz, Arshi, Fraz, Mohammad Moazam, Filipe, Joaquim, Editorial Board Member, Ghosh, Ashish, Editorial Board Member, Zhou, Lizhu, Editorial Board Member, Nguyen, Ngoc Thanh, editor, Chbeir, Richard, editor, Manolopoulos, Yannis, editor, Fujita, Hamido, editor, Hong, Tzung-Pei, editor, Nguyen, Le Minh, editor, and Wojtkiewicz, Krystian, editor
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- 2024
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48. Graph Convolutional Networks Based Multi-modal Data Integration for Breast Cancer Survival Prediction
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Hu, Hongbin, Liang, Wenbin, Zou, Xitao, Zou, Xianchun, Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Huang, De-Shuang, editor, Zhang, Qinhu, editor, and Guo, Jiayang, editor
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- 2024
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49. Leveraging Foundation Models for Enhanced Detection of Colorectal Cancer Biomarkers in Small Datasets
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Myles, Craig, Um, In Hwa, Harrison, David J., Harris-Birtill, David, Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Yap, Moi Hoon, editor, Kendrick, Connah, editor, Behera, Ardhendu, editor, Cootes, Timothy, editor, and Zwiggelaar, Reyer, editor
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- 2024
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50. Design of a Cyclone-Proofing Humanity Simulator Using Programmable Cellular Automata
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Sahoo, Sudhakar, Saha, Swarnava, Kazi, Abdullah, Filipe, Joaquim, Editorial Board Member, Ghosh, Ashish, Editorial Board Member, Prates, Raquel Oliveira, Editorial Board Member, Zhou, Lizhu, Editorial Board Member, Dalui, Mamata, editor, Das, Sukanta, editor, and Formenti, Enrico, editor
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- 2024
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