23 results on '"yeast morphology"'
Search Results
2. Impacts of Reduced (Vacuum) Pressure on Yeast Fermentation as Assessed Using Standard Methods and Automated Image Analysis.
- Author
-
Guadalupe-Daqui, Mario, Chen, Mandi, Sarnoski, Paul J., Goodrich-Schneider, Renée M., and MacIntosh, Andrew J.
- Subjects
IMAGE analysis ,FERMENTATION ,INDUSTRIAL concentration ,ATMOSPHERIC pressure ,CELL suspensions ,SACCHAROMYCES cerevisiae ,YEAST - Abstract
In this study the combinatory effect of several extrinsic factors on reduced (vacuum) pressure fermentations was explored. Specifically, the pressure, temperature, and FAN levels of high gravity Saccharomyces cerevisiae fermentations were manipulated, while yeast morphology was assessed using automated multivariate image analysis. Fermentation attributes including yeast growth, viability, and ethanol production were monitored using standard methods. Across all FAN and temperature levels, reduced pressure (vacuum pressure) fermentations resulted in a greater than or equal number of cells in suspension, higher average viability, and greater ethanol production in comparison to atmospheric pressure fermentations; however, the magnitude of the effect varied with extrinsic factors. The image analysis revealed that while yeast size was extremely variable across all fermentations, the ratio of vacuole to cell area consistently decreased over each fermentation and could be used to predict the point where the yeast experienced a sharp decline in viability ending the fermentation. This study showed that a combination of traditional measurements and novel automated analyses can be used by brewers to anticipate performance and endpoints of their fermentations, and that reduced pressure can have significant effects upon the rate and final ethanol concentration of variable industrial fermentations. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
3. Reliable budding pattern classification of yeast cells with time-resolved measurement of metabolite production
- Author
-
Michela Winters, Violetta Aru, Kate Howell, and Nils Arneborg
- Subjects
budding pattern ,filamentous growth ,metabolism ,Saccharomyces cerevisiae ,yeast morphology ,Biology (General) ,QH301-705.5 - Abstract
Filamentous growth in Saccharomyces cerevisiae is a stress response commonly induced under nutrient deprivation and by certain alcohols. It is a compound phenotype characterized by pseudohyphal growth, invasion and a shift to more polarized budding. Previous methods have not allowed the time-resolved determination of filamentous growth. Here we present a new method for budding pattern characterization that enables the measurement of filamentous growth and metabolite concentration during yeast cell growth at precise time intervals. By combining chemical cell immobilization and single-cell imaging using an oCelloScope™, this method provides more accurate budding pattern classification compared with previous methods. The applications of the method include, for example, investigation of quorum sensing-controlled yeast filamentous growth and metabolism under stress and identification of toxic metabolites.
- Published
- 2022
- Full Text
- View/download PDF
4. Impacts of Reduced (Vacuum) Pressure on Yeast Fermentation as Assessed Using Standard Methods and Automated Image Analysis
- Author
-
Mario Guadalupe-Daqui, Mandi Chen, Paul J. Sarnoski, Renée M. Goodrich-Schneider, and Andrew J. MacIntosh
- Subjects
FAN ,low CO2 pressure ,temperature ,yeast fermentation ,yeast morphology ,Fermentation industries. Beverages. Alcohol ,TP500-660 - Abstract
In this study the combinatory effect of several extrinsic factors on reduced (vacuum) pressure fermentations was explored. Specifically, the pressure, temperature, and FAN levels of high gravity Saccharomyces cerevisiae fermentations were manipulated, while yeast morphology was assessed using automated multivariate image analysis. Fermentation attributes including yeast growth, viability, and ethanol production were monitored using standard methods. Across all FAN and temperature levels, reduced pressure (vacuum pressure) fermentations resulted in a greater than or equal number of cells in suspension, higher average viability, and greater ethanol production in comparison to atmospheric pressure fermentations; however, the magnitude of the effect varied with extrinsic factors. The image analysis revealed that while yeast size was extremely variable across all fermentations, the ratio of vacuole to cell area consistently decreased over each fermentation and could be used to predict the point where the yeast experienced a sharp decline in viability ending the fermentation. This study showed that a combination of traditional measurements and novel automated analyses can be used by brewers to anticipate performance and endpoints of their fermentations, and that reduced pressure can have significant effects upon the rate and final ethanol concentration of variable industrial fermentations.
- Published
- 2023
- Full Text
- View/download PDF
5. Yeast Morphology Assessment through Automated Image Analysis during Fermentation.
- Author
-
Guadalupe-Daqui, Mario, Chen, Mandi, Thompson-Witrick, Katherine A., and MacIntosh, Andrew J.
- Subjects
IMAGE analysis ,FERMENTATION ,COMPUTER vision ,FERMENTATION products industry ,MORPHOLOGY ,FOOD fermentation - Abstract
The kinetics and success of an industrial fermentation are dependent upon the health of the microorganism(s) responsible. Saccharomyces sp. are the most commonly used organisms in food and beverage production; consequently, many metrics of yeast health and stress have been previously correlated with morphological changes to fermentations kinetics. Many researchers and industries use machine vision to count yeast and assess health through dyes and image analysis. This study assessed known physical differences through automated image analysis taken throughout ongoing high stress fermentations at various temperatures (30 ◦C and 35 ◦C). Measured parameters included sugar consumption rate, number of yeast cells in suspension, yeast cross-sectional area, and vacuole cross-sectional area. The cell morphological properties were analyzed automatically using ImageJ software and validated using manual assessment. It was found that there were significant changes in cell area and ratio of vacuole to cell area over the fermentation. These changes were temperature dependent. The changes in morphology have implications for rates of cellular reactions and efficiency within industrial fermentation processes. The use of automated image analysis to quantify these parameters is possible using currently available systems and will provide additional tools to enhance our understanding of the fermentation process. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
6. A robust flow cytometry-based biomass monitoring tool enables rapid at-line characterization of S. cerevisiae physiology during continuous bioprocessing of spent sulfite liquor.
- Author
-
Vees, Charlotte Anne, Veiter, Lukas, Sax, Fritz, Herwig, Christoph, and Pflügl, Stefan
- Subjects
- *
RAPID tooling , *PHYSIOLOGY , *LIQUORS , *BIOMASS , *SACCHAROMYCES cerevisiae , *BIOMASS chemicals - Abstract
Assessment of viable biomass is challenging in bioprocesses involving complex media with distinct biomass and media particle populations. Biomass monitoring in these circumstances usually requires elaborate offline methods or sophisticated inline sensors. Reliable monitoring tools in an at-line capacity represent a promising alternative but are still scarce to date. In this study, a flow cytometry-based method for biomass monitoring in spent sulfite liquor medium as feedstock for second generation bioethanol production with yeast was developed. The method is capable of (i) yeast cell quantification against medium background, (ii) determination of yeast viability, and (iii) assessment of yeast physiology though morphological analysis of the budding division process. Thus, enhanced insight into physiology and morphology is provided which is not accessible through common online and offline biomass monitoring methods. To demonstrate the capabilities of this method, firstly, a continuous ethanol fermentation process of Saccharomyces cerevisiae with filtered and unfiltered spent sulfite liquor media was analyzed. Subsequently, at-line process monitoring of viability in a retentostat cultivation was conducted. The obtained information was used for a simple control based on addition of essential nutrients in relation to viability. Thereby, inter-dependencies between nutrient supply, physiology, and specific ethanol productivity that are essential for process design could be illuminated. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
7. Properties and Fermentation Activity of Industrial Yeasts Saccharomyces cerevisiae, S. uvarum, Candida utilis and Kluyveromyces marxianus Exposed to AFB1, OTA and ZEA
- Author
-
Željko Jakopović, Karla Hanousek Čiča, Jasna Mrvčić, Irina Pucić, Iva Čanak, Jadranka Frece, Jelka Pleadin, Damir Stanzer, Slaven Zjalić, and Ksenija Markov
- Subjects
mycotoxins ,yeasts ,yeast growth ,yeast morphology ,fermentation ,FTIR ,Biotechnology ,TP248.13-248.65 ,Food processing and manufacture ,TP368-456 - Abstract
In this paper the effect of aflatoxin B1, ochratoxin A and zearalenon on morphology, growth parameters and metabolic activity of yeasts Saccharomyces cerevisiae, Saccharomyces uvarum, Candida utilis and Kluyveromyces marxianus was determined. The results showed that the three mycotoxins affected the morphology of all these yeasts, primarily the cell diameter, but not their final cell count. Fourier transform infrared spectroscopy showed that the yeast membranes bound the mycotoxins, C. utilis in particular. The cell membranes of most yeasts underwent denaturation, except S. uvarum exposed to ochratoxin A and zearalenone. In the early stage of fermentation, all mycotoxin-exposed yeasts had lower metabolic activity and biomass growth than controls, but fermentation products and biomass concentrations reached the control levels by the end of the fermentation, except for C. utilis exposed to 20 μg/mL of zearalenone. The adaptive response to mycotoxins suggests that certain yeasts could be used to control mycotoxin concentrations in the production of fermented food and beverages.
- Published
- 2018
- Full Text
- View/download PDF
8. Yeast Morphology Assessment through Automated Image Analysis during Fermentation
- Author
-
Mario Guadalupe-Daqui, Mandi Chen, Katherine A. Thompson-Witrick, and Andrew J. MacIntosh
- Subjects
yeast morphology ,automated image analysis ,heat stress ,vacuoles ,cell size ,computer vision ,Fermentation industries. Beverages. Alcohol ,TP500-660 - Abstract
The kinetics and success of an industrial fermentation are dependent upon the health of the microorganism(s) responsible. Saccharomyces sp. are the most commonly used organisms in food and beverage production; consequently, many metrics of yeast health and stress have been previously correlated with morphological changes to fermentations kinetics. Many researchers and industries use machine vision to count yeast and assess health through dyes and image analysis. This study assessed known physical differences through automated image analysis taken throughout ongoing high stress fermentations at various temperatures (30 °C and 35 °C). Measured parameters included sugar consumption rate, number of yeast cells in suspension, yeast cross-sectional area, and vacuole cross-sectional area. The cell morphological properties were analyzed automatically using ImageJ software and validated using manual assessment. It was found that there were significant changes in cell area and ratio of vacuole to cell area over the fermentation. These changes were temperature dependent. The changes in morphology have implications for rates of cellular reactions and efficiency within industrial fermentation processes. The use of automated image analysis to quantify these parameters is possible using currently available systems and will provide additional tools to enhance our understanding of the fermentation process.
- Published
- 2021
- Full Text
- View/download PDF
9. Candida intermedia CBS 141442: A Novel Glucose/Xylose Co-Fermenting Isolate for Lignocellulosic Bioethanol Production
- Author
-
Antonio D. Moreno, Elia Tomás-Pejó, Lisbeth Olsson, and Cecilia Geijer
- Subjects
yeast robustness ,yeast morphology ,simultaneous saccharification and fermentation ,biofuels ,cell factory ,Technology - Abstract
The present study describes the isolation of the novel strain Candida intermedia CBS 141442 and investigates the potential of this microorganism for the conversion of lignocellulosic streams. Different C. intermedia clones were isolated during an adaptive laboratory evolution experiment under the selection pressure of lignocellulosic hydrolysate and in strong competition with industrial, xylose-fermenting Saccharomyces cerevisiae cells. Isolates showed different but stable colony and cell morphologies when growing in a solid agar medium (smooth, intermediate and complex morphology) and liquid medium (unicellular, aggregates and pseudohyphal morphology). Clones of the same morphology showed similar fermentation patterns, and the C. intermedia clone I5 (CBS 141442) was selected for further testing due to its superior capacity for xylose consumption (90% of the initial xylose concentration within 72 h) and the highest ethanol yields (0.25 ± 0.02 g ethanol/g sugars consumed). Compared to the well-known yeast Scheffersomyces stipitis, the selected strain showed slightly higher tolerance to the lignocellulosic-derived inhibitors when fermenting a wheat straw hydrolysate. Furthermore, its higher glucose consumption rates (compared to S. stipitis) and its capacity for glucose and xylose co-fermentation makes C. intermedia CBS 141442 an attractive microorganism for the conversion of lignocellulosic substrates, as demonstrated in simultaneous saccharification and fermentation processes.
- Published
- 2020
- Full Text
- View/download PDF
10. Properties and Fermentation Activity of Industrial Yeasts Saccharomyces cerevisiae, S. uvarum, Candida utilis and Kluyveromyces marxianus Exposed to AFB , OTA and ZEA.
- Author
-
Jakopović, Željko, Čiča, Karla Hanousek, Mrvčić, Jasna, Pucić, Irina, Čanak, Iva, Frece, Jadranka, Pleadin, Jelka, Stanzer, Damir, Zjalić, Slaven, and Markov, Ksenija
- Subjects
KLUYVEROMYCES marxianus ,SACCHAROMYCES cerevisiae ,CANDIDA utilis ,FERMENTATION ,FOURIER transform infrared spectroscopy - Abstract
In this paper the effect of aflatoxin B , ochratoxin A and zearalenon on morphology, growth parameters and metabolic activity of yeasts Saccharomyces cerevisiae, Saccharomyces uvarum, Candida utilis and Kluyveromyces marxianus was determined. The results showed that the three mycotoxins affected the morphology of all these yeasts, primarily the cell diameter, but not their final cell count. Fourier transform infrared spectroscopy showed that the yeast membranes bound the mycotoxins, C. utilis in particular. The cell membranes of most yeasts underwent denaturation, except S. uvarum exposed to ochratoxin A and zearalenone. In the early stage of fermentation, all mycotoxin-exposed yeasts had lower metabolic activity and biomass growth than controls, but fermentation products and biomass concentrations reached the control levels by the end of the fermentation, except for C. utilis exposed to 20 μg/ mL of zearalenone. The adaptive response to mycotoxins suggests that certain yeasts could be used to control mycotoxin concentrations in the production of fermented food and beverages. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
11. Reliable budding pattern classification of yeast cells with time-resolved measurement of metabolite production
- Author
-
Winters, Michela, Aru, Violetta, Howell, Kate, Arneborg, Nils, Winters, Michela, Aru, Violetta, Howell, Kate, and Arneborg, Nils
- Abstract
Filamentous growth in Saccharomyces cerevisiae is a stress response commonly induced under nutrient deprivation and by certain alcohols. It is a compound phenotype characterized by pseudohyphal growth, invasion and a shift to more polarized budding. Previous methods have not allowed the time-resolved determination of filamentous growth. Here we present a new method for budding pattern characterization that enables the measurement of filamentous growth and metabolite concentration during yeast cell growth at precise time intervals. By combining chemical cell immobilization and single-cell imaging using an oCelloScope (TM), this method provides more accurate budding pattern classification compared with previous methods. The applications of the method include, for example, investigation of quorum sensing-controlled yeast filamentous growth and metabolism under stress and identification of toxic metabolites.METHOD SUMMARY An accurate method for yeast budding pattern determination is presented using a combination of oCelloScope (TM) imaging, chemical cell immobilization and proton (H-1) NMR analysis. This new method furthermore enables the measurement of time-resolved metabolite concentration in parallel with monitoring yeast budding patterns.
- Published
- 2022
12. Fouling release of UV-cured acrylic coatings: Set-up of an in vitro test with Rhodotorula mucilaginosa.
- Author
-
Ozzello, Elena, Mollea, Chiara, Bosco, Francesca, and Bongiovanni, Roberta
- Subjects
- *
ACRYLIC coatings , *RHODOTORULA mucilaginosa , *FOULING , *CROSSLINKING (Polymerization) , *MOLECULAR weights - Abstract
Acrylic coatings were prepared by UV-induced crosslinking of two different diacrylates monomers having the same molecular weight but containing either a polyethyleneoxide chain or an alkylic chain. The fouling behavior of the UV-cured coatings was assessed by a simple set-up, monitoring the growth of Rhodotorula mucilaginosa and the adhesion of the film formed by the pigmented yeast. The effect of the monomers, the photoinitiator and the polymers on the microorganism growth was studied. The monomers partially inhibited the yeast growth, the coatings showed fouling release activity: yeast could grow on both coatings but with different morphology, they detached easily by washing depending on the type of coating. By examining the physico-chemical and mechanical properties of the polymers, the fouling release behavior was found mostly dependent on the surface tension and the water uptake of the coatings. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
13. A robust flow cytometry-based biomass monitoring tool enables rapid at-line characterization of S. cerevisiae physiology during continuous bioprocessing of spent sulfite liquor
- Author
-
Fritz Sax, Charlotte Anne Vees, Lukas Veiter, Christoph Herwig, and Stefan Pflügl
- Subjects
0106 biological sciences ,Physiology ,Biomass ,Saccharomyces cerevisiae ,Ethanol fermentation ,Raw material ,01 natural sciences ,Biochemistry ,Particle background ,Analytical Chemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Industrial Microbiology ,Bioreactors ,Sulfite ,010608 biotechnology ,Continuous bioprocessing with cell retention ,Sulfites ,Bioprocess ,Sustainable bioprocess solution ,Yeast morphology ,0303 health sciences ,Complex medium ,Ethanol ,030306 microbiology ,Equipment Design ,Flow Cytometry ,Yeast ,Culture Media ,chemistry ,Biofuel ,Scientific method ,Fermentation ,Environmental science ,Viable/non-viable biomass populations ,Research Paper - Abstract
Assessment of viable biomass is challenging in bioprocesses involving complex media with distinct biomass and media particle populations. Biomass monitoring in these circumstances usually requires elaborate offline methods or sophisticated inline sensors. Reliable monitoring tools in an at-line capacity represent a promising alternative but are still scarce to date. In this study, a flow cytometry-based method for biomass monitoring in spent sulfite liquor medium as feedstock for second generation bioethanol production with yeast was developed. The method is capable of (i) yeast cell quantification against medium background, (ii) determination of yeast viability, and (iii) assessment of yeast physiology though morphological analysis of the budding division process. Thus, enhanced insight into physiology and morphology is provided which is not accessible through common online and offline biomass monitoring methods. To demonstrate the capabilities of this method, firstly, a continuous ethanol fermentation process of Saccharomyces cerevisiae with filtered and unfiltered spent sulfite liquor media was analyzed. Subsequently, at-line process monitoring of viability in a retentostat cultivation was conducted. The obtained information was used for a simple control based on addition of essential nutrients in relation to viability. Thereby, inter-dependencies between nutrient supply, physiology, and specific ethanol productivity that are essential for process design could be illuminated.
- Published
- 2020
14. Remodelling metabolism for high-level resveratrol production in Yarrowia lipolytica.
- Author
-
Liu, Mengsu, Wang, Chao, Ren, Xuefeng, Gao, Song, Yu, Shiqin, and Zhou, Jingwen
- Subjects
- *
RESVERATROL , *SHIKIMIC acid , *GENE knockout , *METABOLISM , *GLYCOLYSIS - Abstract
• Fusion of Pc4CL1 and VvSTS facilitated the accumulation of resveratrol. • Redirecting metabolic flux of the precursor increased resveratrol production. • Multi-copy integration of key genes and knockout of DGA1 facilitated the process. • Y. lipolytica performed best for resveratrol production in the yeast morphology. • The highest titer for microbially produced resveratrol (22.5 g/L) reported to date. Resveratrol is a polyphenol with numerous applications in food, pharma, and cosmetics. Lack of precursors and low titer are the main problems hindering industrial scale resveratrol production. Based on previous prescreening, expressing the combination of FjTAL , Pc4CL1 and VvSTS achieved the best resveratrol titer. This was further improved to 235.1 mg/L through engineering the shikimic acid pathway, applying a modular enzyme assembly of Pc4CL1 and VvSTS , enhancing p -coumaric acid supply and diverting glycolytic flux toward erythrose-4-phosphate. The titer was increased to 819.1 mg/L following two rounds of multicopy integration of resveratrol biosynthesis and malonyl-CoA supply, respectively. The titer reached 22.5 g/L with a yield on glucose of 65.5 mg/g using an optimum fed-batch strategy in a 5 L bioreactor with morphology control. This research is the highest report on the de novo production of resveratrol in Yarrowia lipolytica and the findings lay a solid foundation for other producing polyphenols. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
15. Characterization and application of Torulaspora delbrueckii JK08 and Pichia anomala JK04 as baker's yeasts.
- Author
-
AGUNG WAHYONO, WOO-WON KANG, and HEUI-DONG PARK
- Subjects
- *
YEAST , *PICHIA , *FOOD microbiology , *LEAVENING agents , *BREAD - Abstract
Baker's yeasts have long been known to be one of the oldest microbiological starter of food. The objective of study was to evaluate the potentials of Torulaspora delbrueckii JK08 and Pichia anomala JK04 as baker's yeasts. The cells are noticeably smaller and the growth was slower than that of S. cerevisiae, the conventional baker's yeast. These strains showed a lower leavening ability at an equal cells concentration. However, it tremendously increased when the cells concentration were raised, notably for P. anomala JK04. Interestingly, the strains showed remarkable tolerance to hyperosmotic and cation stresses. It was evident that the strains produced smaller bread loaf and consequently lower specific volume. This affected the textural characteristics of bread, as it had harder texture and greater chewiness. In contrast, the strains produced better springiness, brighter crust and crumb colour. The shelf-life of bread was comparable among the strains, except for P. anomala JK04, for which it was slightly shorter. According to the consumer evaluation, T. delbrueckii JK08 exhibited superior flavour, while P. anomala JK04 showed superior mouth feel. Despite of that, T. delbrueckii JK08 and P. anomala JK04 did not perform better in every aspect, employing its superiority in particular manner are greatly promising in bread making. [ABSTRACT FROM AUTHOR]
- Published
- 2015
16. Yeast Morphology Assessment through Automated Image Analysis during Fermentation
- Author
-
Andrew J. MacIntosh, Mandi Chen, Mario Guadalupe-Daqui, and Katherine A. Thompson-Witrick
- Subjects
0106 biological sciences ,yeast morphology ,Microorganism ,automated image analysis ,Industrial fermentation ,Plant Science ,Sugar consumption ,Biology ,01 natural sciences ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,computer vision ,Cell size ,heat stress ,03 medical and health sciences ,010608 biotechnology ,Food science ,030304 developmental biology ,lcsh:TP500-660 ,0303 health sciences ,lcsh:Fermentation industries. Beverages. Alcohol ,Yeast ,High stress ,Saccharomyces sp ,cell size ,Fermentation ,vacuoles ,Food Science - Abstract
The kinetics and success of an industrial fermentation are dependent upon the health of the microorganism(s) responsible. Saccharomyces sp. are the most commonly used organisms in food and beverage production; consequently, many metrics of yeast health and stress have been previously correlated with morphological changes to fermentations kinetics. Many researchers and industries use machine vision to count yeast and assess health through dyes and image analysis. This study assessed known physical differences through automated image analysis taken throughout ongoing high stress fermentations at various temperatures (30 °C and 35 °C). Measured parameters included sugar consumption rate, number of yeast cells in suspension, yeast cross-sectional area, and vacuole cross-sectional area. The cell morphological properties were analyzed automatically using ImageJ software and validated using manual assessment. It was found that there were significant changes in cell area and ratio of vacuole to cell area over the fermentation. These changes were temperature dependent. The changes in morphology have implications for rates of cellular reactions and efficiency within industrial fermentation processes. The use of automated image analysis to quantify these parameters is possible using currently available systems and will provide additional tools to enhance our understanding of the fermentation process.
- Published
- 2021
- Full Text
- View/download PDF
17. Fouling release of UV-cured acrylic coatings: Set-up of an in vitro test with Rhodotorula mucilaginosa
- Author
-
Elena Daniela Ozzello, Roberta Maria Bongiovanni, Francesca Bosco, and Chiara Mollea
- Subjects
Materials science ,Antifouling coatings ,02 engineering and technology ,engineering.material ,010402 general chemistry ,01 natural sciences ,Paint adhesion testing ,Rhodotorula mucilaginosa ,Adhesion test ,chemistry.chemical_compound ,Coating ,Fouling-release coating ,Polymeric coating ,Photopolymerization ,Yeast morphology ,Materials Chemistry ,Organic chemistry ,chemistry.chemical_classification ,Fouling ,Surfaces and Interfaces ,General Chemistry ,Polymer ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,0104 chemical sciences ,Surfaces, Coatings and Films ,Monomer ,Photopolymer ,chemistry ,Chemical engineering ,engineering ,0210 nano-technology ,Photoinitiator - Abstract
Acrylic coatings were prepared by UV-induced crosslinking of two different diacrylates monomers having the same molecular weight but containing either a polyethyleneoxide chain or an alkylic chain. The fouling behavior of the UV-cured coatings was assessed by a simple set-up, monitoring the growth of Rhodotorula mucilaginosa and the adhesion of the film formed by the pigmented yeast. The effect of the monomers, the photoinitiator and the polymers on the microorganism growth was studied. The monomers partially inhibited the yeast growth, the coatings showed fouling release activity: yeast could grow on both coatings but with different morphology, they detached easily by washing depending on the type of coating. By examining the physico-chemical and mechanical properties of the polymers, the fouling release behavior was found mostly dependent on the surface tension and the water uptake of the coatings.
- Published
- 2017
- Full Text
- View/download PDF
18. Reliable budding pattern classification of yeast cells with time-resolved measurement of metabolite production.
- Author
-
Winters M, Aru V, Howell K, and Arneborg N
- Subjects
- Cell Cycle, Cell Division, Cell Proliferation, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae Proteins genetics
- Abstract
Filamentous growth in Saccharomyces cerevisiae is a stress response commonly induced under nutrient deprivation and by certain alcohols. It is a compound phenotype characterized by pseudohyphal growth, invasion and a shift to more polarized budding. Previous methods have not allowed the time-resolved determination of filamentous growth. Here we present a new method for budding pattern characterization that enables the measurement of filamentous growth and metabolite concentration during yeast cell growth at precise time intervals. By combining chemical cell immobilization and single-cell imaging using an oCelloScope™, this method provides more accurate budding pattern classification compared with previous methods. The applications of the method include, for example, investigation of quorum sensing-controlled yeast filamentous growth and metabolism under stress and identification of toxic metabolites.
- Published
- 2022
- Full Text
- View/download PDF
19. Candida intermedia CBS 141442: A Novel Glucose/Xylose Co-Fermenting Isolate for Lignocellulosic Bioethanol Production
- Author
-
Cecilia Geijer, Lisbeth Olsson, Antonio D. Moreno, and Elia Tomás-Pejó
- Subjects
0106 biological sciences ,0301 basic medicine ,Control and Optimization ,yeast morphology ,Saccharomyces cerevisiae ,yeast robustness ,Energy Engineering and Power Technology ,Xylose ,lcsh:Technology ,01 natural sciences ,Hydrolysate ,Agar plate ,03 medical and health sciences ,Hydrolysis ,chemistry.chemical_compound ,010608 biotechnology ,Candida intermedia ,Food science ,Electrical and Electronic Engineering ,Engineering (miscellaneous) ,biology ,lcsh:T ,Renewable Energy, Sustainability and the Environment ,Chemistry ,food and beverages ,simultaneous saccharification and fermentation ,biology.organism_classification ,biofuels ,Yeast ,030104 developmental biology ,Fermentation ,cell factory ,Energy (miscellaneous) - Abstract
The present study describes the isolation of the novel strain Candida intermedia CBS 141442 and investigates the potential of this microorganism for the conversion of lignocellulosic streams. Different C. intermedia clones were isolated during an adaptive laboratory evolution experiment under the selection pressure of lignocellulosic hydrolysate and in strong competition with industrial, xylose-fermenting Saccharomyces cerevisiae cells. Isolates showed different but stable colony and cell morphologies when growing in a solid agar medium (smooth, intermediate and complex morphology) and liquid medium (unicellular, aggregates and pseudohyphal morphology). Clones of the same morphology showed similar fermentation patterns, and the C. intermedia clone I5 (CBS 141442) was selected for further testing due to its superior capacity for xylose consumption (90% of the initial xylose concentration within 72 h) and the highest ethanol yields (0.25 ±, 0.02 g ethanol/g sugars consumed). Compared to the well-known yeast Scheffersomyces stipitis, the selected strain showed slightly higher tolerance to the lignocellulosic-derived inhibitors when fermenting a wheat straw hydrolysate. Furthermore, its higher glucose consumption rates (compared to S. stipitis) and its capacity for glucose and xylose co-fermentation makes C. intermedia CBS 141442 an attractive microorganism for the conversion of lignocellulosic substrates, as demonstrated in simultaneous saccharification and fermentation processes.
- Published
- 2020
- Full Text
- View/download PDF
20. Properties and Fermentation Activity of Industrial Yeasts Saccharomyces cerevisiae, S. uvarum, Candida utilis, and Kluyveromyces marxianus Exposed to AFB1, OTA, and ZEA
- Author
-
Slaven Zjalic, Željko Jakopović, Karla Hanousek Čiča, Irina Pucić, Damir Stanzer, Jadranka Frece, Jelka Pleadin, Iva Čanak, Jasna Mrvčić, and Ksenija Markov
- Subjects
Ochratoxin A ,Aflatoxin ,yeast morphology ,lcsh:Biotechnology ,General Chemical Engineering ,Saccharomyces cerevisiae ,yeasts ,Industrial and Manufacturing Engineering ,chemistry.chemical_compound ,0404 agricultural biotechnology ,Kluyveromyces marxianus ,mycotoxins ,lcsh:TP248.13-248.65 ,yeast growth ,Food science ,Original Scientific Papers ,Mycotoxin ,fermentation ,Fermentation in food processing ,lcsh:TP368-456 ,biology ,food and beverages ,04 agricultural and veterinary sciences ,biology.organism_classification ,040401 food science ,Yeast ,lcsh:Food processing and manufacture ,FTIR ,chemistry ,Fermentation ,Food Science ,Biotechnology - Abstract
In this paper the effect of aflatoxin B1, ochratoxin A and zearalenon on morphology, growth parameters and metabolic activity of yeasts Saccharomyces cerevisiae, Saccharomyces uvarum, Candida utilis and Kluyveromyces marxianus was determined. The results showed that the three mycotoxins affected the morphology of all these yeasts, primarily the cell diameter, but not their final cell count. Fourier transform infrared spectroscopy showed that the yeast membranes bound the mycotoxins, C. utilis in particular. The cell membranes of most yeasts underwent denaturation, except S. uvarum exposed to ochratoxin A and zearalenone. In the early stage of fermentation, all mycotoxin-exposed yeasts had lower metabolic activity and biomass growth than controls, but fermentation products and biomass concentrations reached the control levels by the end of the fermentation, except for C. utilis exposed to 20 μg/mL of zearalenone. The adaptive response to mycotoxins suggests that certain yeasts could be used to control mycotoxin concentrations in the production of fermented food and beverages.
- Published
- 2018
- Full Text
- View/download PDF
21. Candida intermedia CBS 141442: A Novel Glucose/Xylose Co-Fermenting Isolate for Lignocellulosic Bioethanol Production.
- Author
-
Moreno, Antonio D., Tomás-Pejó, Elia, Olsson, Lisbeth, and Geijer, Cecilia
- Subjects
- *
XYLOSE , *ETHANOL as fuel , *CANDIDA , *GLUCOSE , *WHEAT straw , *CELL morphology , *MONOSACCHARIDES , *AGAR - Abstract
The present study describes the isolation of the novel strain Candida intermedia CBS 141442 and investigates the potential of this microorganism for the conversion of lignocellulosic streams. Different C. intermedia clones were isolated during an adaptive laboratory evolution experiment under the selection pressure of lignocellulosic hydrolysate and in strong competition with industrial, xylose-fermenting Saccharomyces cerevisiae cells. Isolates showed different but stable colony and cell morphologies when growing in a solid agar medium (smooth, intermediate and complex morphology) and liquid medium (unicellular, aggregates and pseudohyphal morphology). Clones of the same morphology showed similar fermentation patterns, and the C. intermedia clone I5 (CBS 141442) was selected for further testing due to its superior capacity for xylose consumption (90% of the initial xylose concentration within 72 h) and the highest ethanol yields (0.25 ± 0.02 g ethanol/g sugars consumed). Compared to the well-known yeast Scheffersomyces stipitis, the selected strain showed slightly higher tolerance to the lignocellulosic-derived inhibitors when fermenting a wheat straw hydrolysate. Furthermore, its higher glucose consumption rates (compared to S. stipitis) and its capacity for glucose and xylose co-fermentation makes C. intermedia CBS 141442 an attractive microorganism for the conversion of lignocellulosic substrates, as demonstrated in simultaneous saccharification and fermentation processes. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
22. Properties and Fermentation Activity of Industrial Yeasts Saccharomyces cerevisiae, S. uvarum, Candida utilis and Kluyveromyces marxianus Exposed to AFB 1 , OTA and ZEA.
- Author
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Jakopović Ž, Hanousek Čiča K, Mrvčić J, Pucić I, Čanak I, Frece J, Pleadin J, Stanzer D, Zjalić S, and Markov K
- Abstract
In this paper the effect of aflatoxin B
1 , ochratoxin A and zearalenon on morphology, growth parameters and metabolic activity of yeasts Saccharomyces cerevisiae , Saccharomyces uvarum , Candida utilis and Kluyveromyces marxianus was determined. The results showed that the three mycotoxins affected the morphology of all these yeasts, primarily the cell diameter, but not their final cell count. Fourier transform infrared spectroscopy showed that the yeast membranes bound the mycotoxins, C. utilis in particular. The cell membranes of most yeasts underwent denaturation, except S. uvarum exposed to ochratoxin A and zearalenone. In the early stage of fermentation, all mycotoxin-exposed yeasts had lower metabolic activity and biomass growth than controls, but fermentation products and biomass concentrations reached the control levels by the end of the fermentation, except for C. utilis exposed to 20 µg/mL of zearalenone. The adaptive response to mycotoxins suggests that certain yeasts could be used to control mycotoxin concentrations in the production of fermented food and beverages.- Published
- 2018
- Full Text
- View/download PDF
23. The Genotype-Phenotype Map: Origins, Properties, and Evolutionary Consequences
- Author
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Ho, Wei-Chin
- Subjects
- adaptation, neutral evolution, yeast morphology, flux balance analysis, genetic robustness, phenotypic plasticity
- Abstract
Describing and understanding the relationship between genotypes and phenotypes, or the genotype-phenotype map, is of long-lasting interest in genetics and evolutionary biology. My dissertation focuses on understanding the origins, properties, and evolutionary consequences of genotype-phenotype maps. In Chapter 2, using yeast morphological traits, I showed that most traits are affected by a small proportion of genes, many of which have small effects while a few have large effects. To explain why many phenotypic effects are small, in the rest of Chapter 2 as well as in Chapter 3, I studied yeast morphological traits, yeast gene expression traits, and E. coli reaction flux traits and found evidence supporting the hypothesis of adaptive genetic robustness. In Chapter 4, by comparing the evolutionary rates of phenotypic traits of varying importance, I found evidence for that yeast morphological traits have evolved generally by adaptation while yeast gene expression traits have evolved largely neutrally. In Chapter 5, using yeast morphological traits, I found that increasing mutational correlation generally facilitates phenotypic evolution when the correlation is low, but constrains it when the correlation become very high. Thus, an intermediate level of mutation correlation is most conducive to phenotype evolution. In Chapter 6, using E. coli gene expression level traits and E. coli reaction flux traits, I found that genetic changes tend to reverse plastic changes when a population adapts to a new environment, suggesting that phenotypic plasticity does not generally serve as a steppingstone to genetic adaption. To sum up, this dissertation highlights the importance of incorporating genotype-phenotype maps into the study of evolution, identifies influential factors in phenotypic evolution, and thus deepens our understanding of general principles of evolution.
- Published
- 2017
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