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Reaction electronic flux and its role in DNA intramolecular proton transfers.

Authors :
Durán, Rocío
Vöhringer-Martinez, Esteban
Toro-Labbé, Alejandro
Herrera, Bárbara
Source :
Journal of Molecular Modeling. Jun2016, Vol. 22 Issue 6, p1-10. 10p. 1 Diagram, 3 Charts, 4 Graphs.
Publication Year :
2016

Abstract

Proton transfer reactions present a key step in many biological and chemical processes. Here, we focused on the electronic changes in the proton transfer reactions of the four DNA bases. In combination with the previous structural analysis the reaction electronic flux together with local descriptors as the Hirshfeld-I charges allow us to identify chemical events and rationalize the underlying reaction mechanism. Our results show that imine-enamine in adenine and citosyne, and keto-enol tautomerizations in thymine and guanine have different reaction mechanisms. The former involve net structural rearrangements driven by favored electrostatic interactions between the proton and the acceptor atom whereas the keto-enol tautomerizations require electronic changes reflected in the reaction electronic flux and changes in the NBO bond orders which favour the proton transfer reaction. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
16102940
Volume :
22
Issue :
6
Database :
Academic Search Index
Journal :
Journal of Molecular Modeling
Publication Type :
Academic Journal
Accession number :
121174934
Full Text :
https://doi.org/10.1007/s00894-016-2989-x