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A two-step discriminated method to identify thermophilic proteins.

Authors :
Tang, Hua
Cao, Ren-Zhi
Wang, Wen
Liu, Tie-Shan
Wang, Li-Ming
He, Chun-Mei
Source :
International Journal of Biomathematics. May2017, Vol. 10 Issue 4, p-1. 8p.
Publication Year :
2017

Abstract

Improving thermostability of an enzyme can accelerate the relevant chemical reaction. Thus, the analysis and prediction of thermophilic proteins are conducive to protein engineering and enzyme design. In this study, a novel method based on two-step discrimination was proposed to distinguish between thermophilic and non-thermophilic proteins. The model was rigorously benchmarked on an objective dataset including 915 thermophilic proteins and 793 non-thermophilic proteins. Results showed that the overall accuracy of our method is 94.44% in 5-fold cross-validation, which is higher than those of other published methods. We believe that the two-step discriminated strategy will become a promising method in the relevant field of protein bioinformatics. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
17935245
Volume :
10
Issue :
4
Database :
Academic Search Index
Journal :
International Journal of Biomathematics
Publication Type :
Academic Journal
Accession number :
122080153
Full Text :
https://doi.org/10.1142/S1793524517500504