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Efficient transposition of Tn4556 by alterations in inverted repeats using a delivery vector carrying a counter-selectable marker for Streptomyces.

Authors :
Sota, Masahiro
Sakoda, Akiko
Ikeda, Haruo
Source :
Journal of Industrial Microbiology & Biotechnology. Mar2019, Vol. 46 Issue 3/4, p477-482. 6p. 4 Charts.
Publication Year :
2019

Abstract

A 6625-base pair transposon, Tn4556, was initially isolated from a Streptomyces strain and a sequence analysis was performed; however, its annotation data remain incomplete. At least three positions were identified as frameshift and base-exchange errors by resequencing. The revised sequence revealed that Tn4556 contains four open reading frames that encode transposase, methyltransferase, isoprenyl diphosphate transferase, and resolvase, respectively. Thirty-eight-base pair inverted repeat (IR) sequences at both ends contained a 1-bp mismatch flanked by a target duplication site, and transposition efficiency was improved by the replacement of imperfectly matched IR-L to perfectly matched IR-L. The detection of Tn4556 transposition was markedly facilitated using a delivery vector carrying a strictly counter-selectable marker for Streptomyces strains. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
13675435
Volume :
46
Issue :
3/4
Database :
Academic Search Index
Journal :
Journal of Industrial Microbiology & Biotechnology
Publication Type :
Academic Journal
Accession number :
135114978
Full Text :
https://doi.org/10.1007/s10295-018-2101-x