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Early detection of unilateral ureteral obstruction by desorption electrospray ionization mass spectrometry.

Authors :
Banerjee, Shibdas
Wong, Anny Chuu-Yun
Yan, Xin
Wu, Bo
Zhao, Hongjuan
Tibshirani, Robert J.
Zare, Richard N.
Brooks, James D.
Source :
Scientific Reports. 7/29/2019, Vol. 9 Issue 1, pN.PAG-N.PAG. 1p.
Publication Year :
2019

Abstract

Desorption electrospray ionization mass spectrometry (DESI-MS) is an emerging analytical tool for rapid in situ assessment of metabolomic profiles on tissue sections without tissue pretreatment or labeling. We applied DESI-MS to identify candidate metabolic biomarkers associated with kidney injury at the early stage. DESI-MS was performed on sections of kidneys from 80 mice over a time course following unilateral ureteral obstruction (UUO) and compared to sham controls. A predictive model of renal damage was constructed using the LASSO (least absolute shrinkage and selection operator) method. Levels of lipid and small metabolites were significantly altered and glycerophospholipids comprised a significant fraction of altered species. These changes correlate with altered expression of lipid metabolic genes, with most genes showing decreased expression. However, rapid upregulation of PG(22:6/22:6) level appeared to be a hitherto unknown feature of the metabolic shift observed in UUO. Using LASSO and SAM (significance analysis of microarrays), we identified a set of well-measured metabolites that accurately predicted UUO-induced renal damage that was detectable by 12 h after UUO, prior to apparent histological changes. Thus, DESI-MS could serve as a useful adjunct to histology in identifying renal damage and demonstrates early and broad changes in membrane associated lipids. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20452322
Volume :
9
Issue :
1
Database :
Academic Search Index
Journal :
Scientific Reports
Publication Type :
Academic Journal
Accession number :
137769939
Full Text :
https://doi.org/10.1038/s41598-019-47396-x